View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8508_high_42 (Length: 240)
Name: NF8508_high_42
Description: NF8508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8508_high_42 |
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Alignment Details
Target: chr7 (Bit Score: 164; Significance: 9e-88; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 14203930 - 14203716
Alignment:
| Q |
1 |
ttgctcttgcatacttcatttcatcttccttcaaagtcaacgcaattatctgtcttataattagctgagagagtatatgaatcaacgagtctttctctat |
100 |
Q |
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| T |
14203930 |
ttgctcttgcatacttcatttcatcatctttcaaagtcaacgcaattatctgtcttataattagctgagagagtatatgaatcaacgagtctttctctaa |
14203831 |
T |
|
| Q |
101 |
tagtcttacggatgagaaaaagaaccatgaatcttcattttgcatcttccatttcttcatgacatgaggggtcttgttttgttggattacatgatttttt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||| |||||||||||||| |
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| T |
14203830 |
tagtcttacggatgagaaaaagaaccatgaatcttcattttgcgtcttccatttctt-----tatgaggtgtcttgttttgttgaattacatgatttttc |
14203736 |
T |
|
| Q |
201 |
aataaaatactacaaaaaca |
220 |
Q |
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|||||||||||||| ||||| |
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| T |
14203735 |
aataaaatactacagaaaca |
14203716 |
T |
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