View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8508_high_50 (Length: 223)

Name: NF8508_high_50
Description: NF8508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8508_high_50
NF8508_high_50
[»] chr7 (25 HSPs)
chr7 (15-205)||(46260108-46260298)
chr7 (15-70)||(18111628-18111683)
chr7 (15-70)||(47012586-47012641)
chr7 (15-67)||(6269369-6269421)
chr7 (31-67)||(24249780-24249816)
chr7 (15-70)||(9363387-9363442)
chr7 (15-70)||(46829479-46829534)
chr7 (15-69)||(3343346-3343400)
chr7 (25-67)||(26018043-26018085)
chr7 (21-68)||(3143976-3144022)
chr7 (15-70)||(8904423-8904478)
chr7 (15-70)||(31487190-31487245)
chr7 (15-70)||(34108871-34108926)
chr7 (25-70)||(17479004-17479050)
chr7 (25-70)||(17483439-17483485)
chr7 (25-70)||(17569729-17569775)
chr7 (25-70)||(17574164-17574210)
chr7 (21-67)||(23034058-23034104)
chr7 (15-69)||(41798221-41798274)
chr7 (17-70)||(16567316-16567368)
chr7 (17-70)||(16598294-16598346)
chr7 (19-68)||(21153052-21153100)
chr7 (15-55)||(5174568-5174608)
chr7 (18-70)||(23844965-23845016)
chr7 (18-70)||(35427545-35427597)
[»] chr8 (32 HSPs)
chr8 (15-70)||(28756535-28756590)
chr8 (15-64)||(28756667-28756716)
chr8 (15-70)||(35792069-35792124)
chr8 (15-70)||(44711978-44712032)
chr8 (21-70)||(2667723-2667772)
chr8 (21-66)||(8109023-8109068)
chr8 (17-70)||(12339176-12339229)
chr8 (31-67)||(33656119-33656155)
chr8 (15-70)||(67177-67232)
chr8 (15-70)||(6511876-6511931)
chr8 (15-70)||(7777196-7777251)
chr8 (15-70)||(7795321-7795376)
chr8 (15-70)||(10644818-10644873)
chr8 (15-70)||(22960433-22960488)
chr8 (15-70)||(25830262-25830317)
chr8 (32-67)||(28732765-28732800)
chr8 (15-70)||(33100485-33100540)
chr8 (15-70)||(42733581-42733636)
chr8 (15-70)||(42786676-42786731)
chr8 (15-70)||(43285979-43286034)
chr8 (15-69)||(10592297-10592351)
chr8 (15-65)||(20065621-20065670)
chr8 (17-70)||(7375797-7375850)
chr8 (17-70)||(20473779-20473831)
chr8 (17-70)||(23754725-23754778)
chr8 (21-70)||(35794072-35794121)
chr8 (25-66)||(36805150-36805191)
chr8 (25-70)||(45405531-45405576)
chr8 (30-70)||(12655922-12655962)
chr8 (15-67)||(14343838-14343890)
chr8 (15-67)||(35345423-35345475)
chr8 (15-67)||(37671719-37671771)
[»] chr5 (31 HSPs)
chr5 (15-70)||(6940166-6940221)
chr5 (15-70)||(26686881-26686936)
chr5 (15-70)||(26956612-26956667)
chr5 (15-70)||(32912038-32912093)
chr5 (15-70)||(40829414-40829469)
chr5 (17-70)||(372402-372455)
chr5 (17-70)||(38293377-38293430)
chr5 (15-70)||(7076585-7076639)
chr5 (15-70)||(9939448-9939503)
chr5 (15-70)||(13461764-13461819)
chr5 (15-70)||(19982002-19982057)
chr5 (15-70)||(27340869-27340923)
chr5 (18-67)||(32510852-32510901)
chr5 (17-62)||(38422653-38422697)
chr5 (15-70)||(1293102-1293157)
chr5 (15-70)||(6758807-6758862)
chr5 (15-70)||(18695318-18695373)
chr5 (15-70)||(19840002-19840057)
chr5 (15-70)||(22098255-22098310)
chr5 (15-70)||(34124621-34124676)
chr5 (15-70)||(34379453-34379508)
chr5 (16-70)||(21012568-21012622)
chr5 (15-69)||(30103468-30103521)
chr5 (16-70)||(33191546-33191600)
chr5 (17-70)||(1671542-1671594)
chr5 (17-70)||(4088443-4088496)
chr5 (33-70)||(7927355-7927392)
chr5 (15-68)||(14321971-14322024)
chr5 (15-68)||(39195719-39195772)
chr5 (19-67)||(1952401-1952449)
chr5 (27-63)||(43493689-43493725)
[»] chr2 (22 HSPs)
chr2 (15-70)||(12784415-12784470)
chr2 (16-67)||(14500909-14500960)
chr2 (15-70)||(21738632-21738687)
chr2 (16-70)||(14499041-14499095)
chr2 (15-70)||(1416055-1416110)
chr2 (15-70)||(40358128-40358183)
chr2 (28-70)||(3771371-3771413)
chr2 (15-67)||(5361798-5361848)
chr2 (16-69)||(12070850-12070903)
chr2 (18-70)||(38874635-38874686)
chr2 (15-70)||(6336252-6336307)
chr2 (15-70)||(13850201-13850255)
chr2 (15-70)||(19916655-19916710)
chr2 (23-70)||(32498928-32498975)
chr2 (15-70)||(34372847-34372901)
chr2 (23-70)||(35334520-35334567)
chr2 (15-69)||(7502444-7502498)
chr2 (15-69)||(13438844-13438898)
chr2 (16-70)||(24766152-24766206)
chr2 (17-67)||(32869829-32869879)
chr2 (29-70)||(4319769-4319810)
chr2 (15-67)||(29192668-29192719)
[»] chr4 (32 HSPs)
chr4 (15-70)||(54801504-54801558)
chr4 (15-70)||(3078924-3078979)
chr4 (15-70)||(31469005-31469060)
chr4 (15-70)||(31559538-31559593)
chr4 (15-70)||(36123476-36123531)
chr4 (15-70)||(39158105-39158160)
chr4 (15-70)||(40348794-40348848)
chr4 (15-70)||(44257746-44257801)
chr4 (15-70)||(47288082-47288137)
chr4 (15-70)||(55996422-55996476)
chr4 (15-70)||(56474780-56474835)
chr4 (17-67)||(40308444-40308493)
chr4 (32-70)||(52697483-52697521)
chr4 (17-70)||(21392570-21392623)
chr4 (21-70)||(53463092-53463141)
chr4 (15-70)||(149501-149556)
chr4 (15-70)||(14443198-14443253)
chr4 (15-70)||(32696805-32696860)
chr4 (31-70)||(40258205-40258244)
chr4 (15-70)||(40335789-40335843)
chr4 (15-70)||(40721981-40722035)
chr4 (15-70)||(44571441-44571495)
chr4 (15-70)||(49584994-49585049)
chr4 (15-70)||(52263895-52263950)
chr4 (15-70)||(53384344-53384398)
chr4 (29-67)||(14113645-14113683)
chr4 (32-70)||(28203392-28203430)
chr4 (15-69)||(48649519-48649573)
chr4 (32-70)||(55960189-55960227)
chr4 (17-70)||(30866353-30866405)
chr4 (16-70)||(1872589-1872645)
chr4 (31-67)||(19879776-19879812)
[»] chr1 (33 HSPs)
chr1 (15-70)||(30535991-30536046)
chr1 (15-70)||(52437494-52437549)
chr1 (17-70)||(12306152-12306205)
chr1 (15-67)||(44723363-44723415)
chr1 (15-70)||(1689391-1689446)
chr1 (19-70)||(45863741-45863792)
chr1 (15-70)||(46281436-46281491)
chr1 (15-70)||(49931553-49931608)
chr1 (15-65)||(23671073-23671123)
chr1 (17-70)||(43755697-43755749)
chr1 (15-67)||(45430802-45430854)
chr1 (15-70)||(740972-741027)
chr1 (15-70)||(5771764-5771819)
chr1 (15-70)||(11947795-11947850)
chr1 (15-70)||(21433417-21433472)
chr1 (15-70)||(27563484-27563538)
chr1 (16-67)||(30804229-30804280)
chr1 (19-70)||(33125343-33125394)
chr1 (15-70)||(40118732-40118786)
chr1 (15-70)||(44672047-44672101)
chr1 (15-70)||(49020420-49020475)
chr1 (15-66)||(50775173-50775224)
chr1 (15-70)||(52283716-52283771)
chr1 (21-67)||(33173713-33173759)
chr1 (32-70)||(42615860-42615898)
chr1 (17-70)||(26501498-26501550)
chr1 (17-70)||(30973552-30973605)
chr1 (15-68)||(32926261-32926314)
chr1 (17-66)||(33660045-33660093)
chr1 (14-55)||(38114291-38114332)
chr1 (25-69)||(1922451-1922495)
chr1 (15-70)||(35026891-35026944)
chr1 (15-67)||(47113277-47113328)
[»] chr3 (32 HSPs)
chr3 (15-69)||(45657786-45657840)
chr3 (17-70)||(349431-349484)
chr3 (15-67)||(42672239-42672291)
chr3 (15-70)||(9311040-9311095)
chr3 (15-70)||(19150335-19150390)
chr3 (15-70)||(26550237-26550292)
chr3 (15-70)||(27168698-27168753)
chr3 (15-70)||(28920066-28920121)
chr3 (19-70)||(38363241-38363292)
chr3 (17-70)||(52089959-52090011)
chr3 (31-67)||(29222432-29222468)
chr3 (15-67)||(48911481-48911533)
chr3 (15-70)||(24095422-24095477)
chr3 (15-54)||(26772384-26772423)
chr3 (15-70)||(29573372-29573427)
chr3 (15-70)||(31017411-31017465)
chr3 (15-70)||(33256309-33256364)
chr3 (15-70)||(37894259-37894314)
chr3 (15-70)||(38671618-38671672)
chr3 (15-70)||(45186568-45186623)
chr3 (15-70)||(48205045-48205099)
chr3 (19-70)||(48287671-48287722)
chr3 (15-70)||(52963332-52963387)
chr3 (32-70)||(32622396-32622434)
chr3 (15-69)||(40419659-40419712)
chr3 (16-70)||(52727466-52727519)
chr3 (17-70)||(29705903-29705955)
chr3 (17-70)||(42683827-42683880)
chr3 (15-68)||(43143518-43143571)
chr3 (17-70)||(52100261-52100313)
chr3 (17-70)||(53681111-53681164)
chr3 (15-67)||(41369600-41369651)
[»] scaffold0121 (1 HSPs)
scaffold0121 (15-67)||(3939-3991)
[»] chr6 (20 HSPs)
chr6 (15-67)||(25142567-25142619)
chr6 (19-70)||(11013997-11014048)
chr6 (19-70)||(16368067-16368118)
chr6 (15-67)||(34570611-34570663)
chr6 (15-70)||(2242038-2242093)
chr6 (15-70)||(16337939-16337994)
chr6 (15-70)||(17182099-17182154)
chr6 (15-70)||(18141317-18141372)
chr6 (15-70)||(27102115-27102169)
chr6 (15-70)||(27143937-27143991)
chr6 (32-70)||(7636461-7636499)
chr6 (32-70)||(26396508-26396546)
chr6 (15-69)||(27612876-27612929)
chr6 (33-70)||(2822222-2822259)
chr6 (33-69)||(16352183-16352219)
chr6 (14-70)||(25127848-25127904)
chr6 (30-70)||(26839534-26839574)
chr6 (15-55)||(28630113-28630153)
chr6 (15-67)||(29197727-29197778)
chr6 (42-70)||(31417339-31417367)
[»] scaffold0178 (1 HSPs)
scaffold0178 (17-70)||(9776-9829)
[»] scaffold0201 (1 HSPs)
scaffold0201 (15-70)||(8472-8527)
[»] scaffold0154 (1 HSPs)
scaffold0154 (15-70)||(9865-9919)
[»] scaffold0160 (1 HSPs)
scaffold0160 (21-70)||(26421-26470)
[»] scaffold0002 (1 HSPs)
scaffold0002 (15-63)||(469654-469702)


Alignment Details
Target: chr7 (Bit Score: 136; Significance: 4e-71; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 15 - 205
Target Start/End: Original strand, 46260108 - 46260298
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctcnnnnnnnnntataaatatctttcataacgatctctatcaaatct 114  Q
    ||||| ||| ||||||||||| || || ||||||| ||||||||||||||||||||         |||||||||||||||||||||||||||||||||||    
T  46260108 agagataaagttgtcacaaaagttgttttaaaatggttgtataaatatcatttctctaaaaaaaatataaatatctttcataacgatctctatcaaatct 46260207  T
Q  115 ctttcagctacaccatcgtgtcgtagtcaagtttctaggctcaaaaaggtttacgtggccttcttttgtttttactaaaacaggaaactaa 205  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46260208 ctttcagctacaccatcttgtcgtagtcaagtttctaggctcaaaaaggtttacgtggccttcttttgtttttactaaaacaggaaactaa 46260298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 18111628 - 18111683
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||||||||||||||||||||||||||||| ||||| || |||||||||||    
T  18111628 agagagaaaattgtcacaaaaattattataaaatggttgtagaagtatcatttctc 18111683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 47012586 - 47012641
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  47012586 agagataaaattgtcacaaaaattattagaaaatgattgtacaaatatcatttctc 47012641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 6269421 - 6269369
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcattt 67  Q
    ||||||||| |||||||||||||| |||||||||| ||||| |||||||||||    
T  6269421 agagagaaagttgtcacaaaaattgttataaaatggttgtacaaatatcattt 6269369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 24249780 - 24249816
Alignment:
Q  31 caaaaattattataaaatgattgtataaatatcattt 67  Q
    |||||||||||||||||||||||||||||||||||||    
T  24249780 caaaaattattataaaatgattgtataaatatcattt 24249816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 9363442 - 9363387
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||| ||| ||||||||||| || |||||||||||||||| ||||||||||||||    
T  9363442 agagataaagttgtcacaaaagttgttataaaatgattgtacaaatatcatttctc 9363387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 46829534 - 46829479
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| |||||||||||||| ||| |||||| ||||| ||||||||||||||    
T  46829534 agagagaaagttgtcacaaaaattgttacaaaatggttgtacaaatatcatttctc 46829479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 3343346 - 3343400
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttct 69  Q
    |||||||||||||||||||||||| | ||||||||| |||  |||||||||||||    
T  3343346 agagagaaaattgtcacaaaaattgtcataaaatgaatgttcaaatatcatttct 3343400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 26018085 - 26018043
Alignment:
Q  25 ttgtcacaaaaattattataaaatgattgtataaatatcattt 67  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    
T  26018085 ttgtcacaaaagttattataaaatgattgtacaaatatcattt 26018043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 3143976 - 3144022
Alignment:
Q  21 aaaattgtcacaaaaattattataaaatgattgtataaatatcatttc 68  Q
    |||||||||| |||||||||||||||||||||||| |||||| |||||    
T  3143976 aaaattgtca-aaaaattattataaaatgattgtacaaatattatttc 3144022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 8904423 - 8904478
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||||||||||||||| | |||| | ||||  ||||||||||||||    
T  8904423 agagagaaaattgtcacaaaaattatcacaaaacggttgttcaaatatcatttctc 8904478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 31487245 - 31487190
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||| ||| ||||||||| ||||||| |||||  ||||||||||||||    
T  31487245 agagagaaaattatcataaaaattatcataaaataattgttgaaatatcatttctc 31487190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 34108871 - 34108926
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||||||||||||||| || ||| |||||| ||||| | ||||||||||||    
T  34108871 agagagaaaattgtcacaaaagttgttagaaaatggttgtacatatatcatttctc 34108926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 17479050 - 17479004
Alignment:
Q  25 ttgtcacaaaaattattataaaat-gattgtataaatatcatttctc 70  Q
    |||||||||||||||||| ||||| ||||||| ||||||||||||||    
T  17479050 ttgtcacaaaaattattacaaaatggattgtacaaatatcatttctc 17479004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 17483485 - 17483439
Alignment:
Q  25 ttgtcacaaaaattattataaaat-gattgtataaatatcatttctc 70  Q
    |||||||||||||||||| ||||| ||||||| ||||||||||||||    
T  17483485 ttgtcacaaaaattattacaaaatggattgtacaaatatcatttctc 17483439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 17569729 - 17569775
Alignment:
Q  25 ttgtcacaaaaattattataaaat-gattgtataaatatcatttctc 70  Q
    |||||||||||||||||| ||||| ||||||| ||||||||||||||    
T  17569729 ttgtcacaaaaattattacaaaatggattgtacaaatatcatttctc 17569775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 17574164 - 17574210
Alignment:
Q  25 ttgtcacaaaaattattataaaat-gattgtataaatatcatttctc 70  Q
    |||||||||||||||||| ||||| ||||||| ||||||||||||||    
T  17574164 ttgtcacaaaaattattacaaaatggattgtacaaatatcatttctc 17574210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 23034104 - 23034058
Alignment:
Q  21 aaaattgtcacaaaaattattataaaatgattgtataaatatcattt 67  Q
    |||||| |||||||| ||||||||||||||| ||| |||||||||||    
T  23034104 aaaattatcacaaaagttattataaaatgatcgtacaaatatcattt 23034058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 41798274 - 41798221
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttct 69  Q
    |||||||||||||||  ||||||||||  ||||| ||||||||||||||||||||    
T  41798274 agagagaaaattgtct-aaaaattatttaaaaattattgtataaatatcatttct 41798221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 16567368 - 16567316
Alignment:
Q  17 agagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||| |||| |||| |||||||| ||||| ||||||||||||||    
T  16567368 agagaaaattgtca-aaaagttataataaaatggttgtacaaatatcatttctc 16567316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 16598294 - 16598346
Alignment:
Q  17 agagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||| |||| |||| |||||||| ||||| ||||||||||||||    
T  16598294 agagaaaattgtca-aaaagttataataaaatggttgtacaaatatcatttctc 16598346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 21153100 - 21153052
Alignment:
Q  19 agaaaattgtcacaaaaattattataaaatgattgtataaatatcatttc 68  Q
    ||||| |||||| ||||||||||| |||||||||||| ||||||||||||    
T  21153100 agaaagttgtca-aaaaattattagaaaatgattgtacaaatatcatttc 21153052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 5174568 - 5174608
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgta 55  Q
    ||||||||| |||||||||||||| |||||||||| |||||    
T  5174568 agagagaaagttgtcacaaaaattgttataaaatggttgta 5174608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 23845016 - 23844965
Alignment:
Q  18 gagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||||||| |||||| |||||  ||||| ||||||||||||||    
T  23845016 gagaaaattgtcacaaaa-ttattacaaaattgttgtacaaatatcatttctc 23844965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 35427597 - 35427545
Alignment:
Q  18 gagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||| |||||||||||||| ||| |||||| |||| ||||||| |||||||    
T  35427597 gagaaagttgtcacaaaaattgttaaaaaatggttgtttaaatatgatttctc 35427545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 3e-16; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 28756590 - 28756535
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  28756590 agagataaaattgtcacaaaaattattataaaatgattgcacaaatatcatttctc 28756535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 28756716 - 28756667
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatca 64  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  28756716 agagataaaattgtcacaaaaattattataaaatgattgcataaatatca 28756667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 35792124 - 35792069
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| ||||||||||| || ||| |||||||||||| ||||||||||||||    
T  35792124 agagagaaagttgtcacaaaagtttttaaaaaatgattgtacaaatatcatttctc 35792069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 44712032 - 44711978
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||||| ||||||||||| ||| | |||||||||||||||||||||    
T  44712032 agagagaaaattgtca-aaaaattattacaaattaattgtataaatatcatttctc 44711978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 2667723 - 2667772
Alignment:
Q  21 aaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||| |||| || ||||||| |||||||||||||||||||||||    
T  2667723 aaaattgtcataaaagttgttataaattgattgtataaatatcatttctc 2667772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 8109068 - 8109023
Alignment:
Q  21 aaaattgtcacaaaaattattataaaatgattgtataaatatcatt 66  Q
    ||||||||||||||||||||| | ||||| ||||||||||||||||    
T  8109068 aaaattgtcacaaaaattattgttaaatggttgtataaatatcatt 8109023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 12339176 - 12339229
Alignment:
Q  17 agagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||| |||| |||||| |||||||||||| ||||||| ||||||    
T  12339176 agagaaaattgtcataaaatttattaaaaaatgattgtacaaatatcgtttctc 12339229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 33656155 - 33656119
Alignment:
Q  31 caaaaattattataaaatgattgtataaatatcattt 67  Q
    ||||| |||||||||||||||||||||||||||||||    
T  33656155 caaaagttattataaaatgattgtataaatatcattt 33656119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 67177 - 67232
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| ||||||||||| || ||| |||||| ||||| ||||||||||||||    
T  67177 agagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctc 67232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 6511876 - 6511931
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| || |||||||| |||| | ||| |||||||||||||||||||||||    
T  6511876 agagagaaagttatcacaaaatttatcaaaaagtgattgtataaatatcatttctc 6511931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 7777196 - 7777251
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| |||||||||||||| ||| ||||| ||| || ||||||||||||||    
T  7777196 agagagaaagttgtcacaaaaattgttaaaaaattattctagaaatatcatttctc 7777251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 7795321 - 7795376
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||||||||||||||| || ||| |||||  || |||||||||||||||||    
T  7795321 agagagaaaattgtcacaaaagttgttaaaaaatagttctataaatatcatttctc 7795376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 10644818 - 10644873
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| ||||||||||| || ||| |||||| ||||| ||||||||||||||    
T  10644818 agagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctc 10644873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 22960433 - 22960488
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||| |||||||||||| |||||||  ||||||| ||||| ||||||||||||||    
T  22960433 agagataaaattgtcacagaaattatcctaaaatggttgtacaaatatcatttctc 22960488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 25830262 - 25830317
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| ||||||||||| || ||| |||||| ||||| ||||||||||||||    
T  25830262 agagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctc 25830317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 28732800 - 28732765
Alignment:
Q  32 aaaaattattataaaatgattgtataaatatcattt 67  Q
    ||||||||| ||||||||||||||||||||||||||    
T  28732800 aaaaattatcataaaatgattgtataaatatcattt 28732765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 33100485 - 33100540
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| ||||||||||| || |||||||||| ||||  ||||||||||||||    
T  33100485 agagagaaagttgtcacaaaagttgttataaaatggttgttcaaatatcatttctc 33100540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 42733581 - 42733636
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||||||||||||| ||  |||||| ||||  ||||||||||||||    
T  42733581 agagagaaaattgtcacaaaaattgtttaaaaatggttgttcaaatatcatttctc 42733636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 42786676 - 42786731
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| |||||||||||||| | | |||||| ||||| ||||||||||||||    
T  42786676 agagagaaagttgtcacaaaaattgtaagaaaatggttgtacaaatatcatttctc 42786731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 43285979 - 43286034
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| ||||||||||| |||||| |||||| ||||  ||||||||||||||    
T  43285979 agagagaaagttgtcacaaaagttattagaaaatggttgtccaaatatcatttctc 43286034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 10592297 - 10592351
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttct 69  Q
    ||||||||| ||||||||||| |||| | |||||||||||| | |||||||||||    
T  10592297 agagagaaagttgtcacaaaagttatcaaaaaatgattgtaaagatatcatttct 10592351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 20065670 - 20065621
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcat 65  Q
    |||||||||||||||| ||||||||| | ||||| ||||||||||||||||    
T  20065670 agagagaaaattgtca-aaaaattatcacaaaattattgtataaatatcat 20065621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 7375797 - 7375850
Alignment:
Q  17 agagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||| |||||| |||| ||||||||  ||| |||||||||||||||    
T  7375797 agagaaaattgtaacaaaagttatcataaaatggatgtttaaatatcatttctc 7375850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 20473831 - 20473779
Alignment:
Q  17 agagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||| |||||| ||||||| |||||||||| ||||| ||||||||||||||    
T  20473831 agagaaagttgtca-aaaaattgttataaaatggttgtacaaatatcatttctc 20473779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 23754725 - 23754778
Alignment:
Q  17 agagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||| ||||||||||| |||||| |||||| ||||  ||||||||||||||    
T  23754725 agagaaagttgtcacaaaagttattaaaaaatggttgttcaaatatcatttctc 23754778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 35794121 - 35794072
Alignment:
Q  21 aaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||| || ||||||| ||| ||||||||||| |||||||||||||||    
T  35794121 aaaattggcaaaaaaattgttaaaaaatgattgtttaaatatcatttctc 35794072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 36805150 - 36805191
Alignment:
Q  25 ttgtcacaaaaattattataaaatgattgtataaatatcatt 66  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||    
T  36805150 ttgtcacaaaagttattatcaaatgattgtacaaatatcatt 36805191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 45405576 - 45405531
Alignment:
Q  25 ttgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||||||| |||||| ||||| | ||||||||||||    
T  45405576 ttgtcacaaaaattattaaaaaatggttgtacatatatcatttctc 45405531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 70
Target Start/End: Complemental strand, 12655962 - 12655922
Alignment:
Q  30 acaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||| ||||||||||||| ||||| ||||||||||||||    
T  12655962 acaaaagttattataaaatggttgtacaaatatcatttctc 12655922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 14343838 - 14343890
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcattt 67  Q
    ||||||||| |||||||||||||||| || |||| || ||||| |||||||||    
T  14343838 agagagaaagttgtcacaaaaattatcatgaaattatcgtatacatatcattt 14343890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 35345475 - 35345423
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcattt 67  Q
    ||||||||  || ||||||||||||||| |||||| ||||| |||||||||||    
T  35345475 agagagaaggttatcacaaaaattattacaaaatggttgtacaaatatcattt 35345423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 37671719 - 37671771
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcattt 67  Q
    ||||||||| |||||||||||||||| | ||||| |||||| |||| ||||||    
T  37671719 agagagaaatttgtcacaaaaattatcaaaaaataattgtaaaaatgtcattt 37671771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 3e-16; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 6940166 - 6940221
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||    
T  6940166 agagagaaagttgtcacaaaaattattataaaatggttgtacaaatatcatttctc 6940221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 26686936 - 26686881
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||    
T  26686936 agagagaaagttgtcacaaaaattattaaaaaataattgtataaatatcatttctc 26686881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 26956667 - 26956612
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||    
T  26956667 agagagaaagttgtcacaaaaattattaaaaaataattgtataaatatcatttctc 26956612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 32912093 - 32912038
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||||||||||||||| ||||||||| |||  ||||||||||||||    
T  32912093 agagagaaaattgtcacaaaaattatcataaaatgaatgttcaaatatcatttctc 32912038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 40829469 - 40829414
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||| |||||||||||||||||||||| |||||| ||||| ||||||||||||||    
T  40829469 agagaaaaaattgtcacaaaaattattaaaaaatggttgtacaaatatcatttctc 40829414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 372402 - 372455
Alignment:
Q  17 agagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||| |||||| ||||||||||||||| ||||| ||||||||||||||    
T  372402 agagaaaattatcacaacaattattataaaatggttgtacaaatatcatttctc 372455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 38293377 - 38293430
Alignment:
Q  17 agagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||| |||||||||||||| |||||||||| ||||| ||||||||||||||    
T  38293377 agagaaagttgtcacaaaaattgttataaaatggttgtaaaaatatcatttctc 38293430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 7076585 - 7076639
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||||||||||||||||||| || |||||||||||  ||||||||||||||    
T  7076585 agagagaaaattgtcacaaaaatta-taaaaaatgattgttcaaatatcatttctc 7076639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 9939448 - 9939503
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||||||||||||||| || ||| |||||| | ||||||||||||||||||    
T  9939448 agagagaaaattgtcacaaaacttgttacaaaatggtagtataaatatcatttctc 9939503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 13461819 - 13461764
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||||||||||| ||| |||| | ||||||||||||||||| |||||||||    
T  13461819 agagagaaaattgtcacgaaagttatcacaaaatgattgtataaatttcatttctc 13461764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 19982002 - 19982057
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||| |||||||||||||||||||| | |||||||||||  ||||||||||||||    
T  19982002 agagaaaaaattgtcacaaaaattatcaaaaaatgattgttaaaatatcatttctc 19982057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 27340923 - 27340869
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||||| ||||||||| ||||| |||||||| ||||||||||||||    
T  27340923 agagagaaaattgtca-aaaaattataataaagtgattgtacaaatatcatttctc 27340869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 32510852 - 32510901
Alignment:
Q  18 gagaaaattgtcacaaaaattattataaaatgattgtataaatatcattt 67  Q
    ||||||||||||||||||||||| ||||| || |||||||||||| ||||    
T  32510852 gagaaaattgtcacaaaaattatcataaattggttgtataaatataattt 32510901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 38422697 - 38422653
Alignment:
Q  17 agagaaaattgtcacaaaaattattataaaatgattgtataaatat 62  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||    
T  38422697 agagaaaattgtca-aaaaattatcataaaatgattgtataaatat 38422653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 1293102 - 1293157
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| ||||||||||| || ||| |||||| ||||| ||||||||||||||    
T  1293102 agagagaaagttgtcacaaaagttgttaaaaaatggttgtacaaatatcatttctc 1293157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 6758807 - 6758862
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| |||||||||||||| ||| |||||| ||||| | ||||||||||||    
T  6758807 agagagaaagttgtcacaaaaattgttagaaaatggttgtacatatatcatttctc 6758862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 18695373 - 18695318
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| ||||||||||| || ||| |||||| ||||| ||||||||||||||    
T  18695373 agagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctc 18695318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 19840002 - 19840057
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| |||||||||||||| | ||||||||| |||  ||||||||||||||    
T  19840002 agagagaaagttgtcacaaaaattgtcataaaatgaatgttcaaatatcatttctc 19840057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 22098310 - 22098255
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| ||||||||||| || ||| |||||| ||||| ||||||||||||||    
T  22098310 agagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctc 22098255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 34124676 - 34124621
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||| ||||||||||||| ||||||||  |||  ||||||||||||||    
T  34124676 agagagaaaattatcacaaaaattatcataaaatggatgttcaaatatcatttctc 34124621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 34379508 - 34379453
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||||||||||||||||  |||||| ||||  |||||||| |||||    
T  34379508 agagagaaaattgtcacaaaaattatttaaaaatggttgttcaaatatcacttctc 34379453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 21012622 - 21012568
Alignment:
Q  16 gagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||| |||||||||||||| | |||||||| ||||| |||||| |||||||    
T  21012622 gagagaaagttgtcacaaaaattgtcataaaatggttgtacaaatataatttctc 21012568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 30103468 - 30103521
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttct 69  Q
    |||||||||||||| |||||||||||   |||||||||||| |||||||||||||    
T  30103468 agagagaaaattgt-acaaaaattatacaaaaatgattgtacaaatatcatttct 30103521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 33191600 - 33191546
Alignment:
Q  16 gagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||| |||||  |||||||  || |||||||||||||||||||||||||||    
T  33191600 gagagaaagttgtcttaaaaattgatagaaaatgattgtataaatatcatttctc 33191546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 1671594 - 1671542
Alignment:
Q  17 agagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||||||||||||||||| || ||||| |||||  ||||||||||||||    
T  1671594 agagaaaattgtcacaaaaatta-taaaaaattattgtccaaatatcatttctc 1671542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 4088496 - 4088443
Alignment:
Q  17 agagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||| ||||||||||| || ||||||||||  |||| ||||||||||||||    
T  4088496 agagaaagttgtcacaaaagttgttataaaatggatgtacaaatatcatttctc 4088443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 7927392 - 7927355
Alignment:
Q  33 aaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||| | |||||||||||||||||||||||||||    
T  7927392 aaaattatcacaaaatgattgtataaatatcatttctc 7927355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 14321971 - 14322024
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttc 68  Q
    ||||||||| ||||||||||| || ||| |||||| ||||| ||||||||||||    
T  14321971 agagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttc 14322024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 39195772 - 39195719
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttc 68  Q
    ||||||||| |||||||||||||||| | ||| |||||||  ||||||||||||    
T  39195772 agagagaaagttgtcacaaaaattatcaaaaagtgattgttcaaatatcatttc 39195719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 1952449 - 1952401
Alignment:
Q  19 agaaaattgtcacaaaaattattataaaatgattgtataaatatcattt 67  Q
    |||||||||||||| ||||| |||||||||| ||||| |||||| ||||    
T  1952449 agaaaattgtcacacaaattgttataaaatggttgtacaaatattattt 1952401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 43493725 - 43493689
Alignment:
Q  27 gtcacaaaaattattataaaatgattgtataaatatc 63  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  43493725 gtcacaaaaattatcataaaataattgtataaatatc 43493689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 3e-16; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 12784415 - 12784470
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||    
T  12784415 agagagaaagttgtcacaaaaattattataaaatggttgtacaaatatcatttctc 12784470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 14500909 - 14500960
Alignment:
Q  16 gagagaaaattgtcacaaaaattattataaaatgattgtataaatatcattt 67  Q
    |||| |||||||||||||||||| |||||||||| |||||||||||||||||    
T  14500909 gagaaaaaattgtcacaaaaattgttataaaatggttgtataaatatcattt 14500960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 21738632 - 21738687
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||| ||||||||||||||| |||||| ||||| ||||||||||||||    
T  21738632 agagagaaaattatcacaaaaattattagaaaatggttgtacaaatatcatttctc 21738687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 14499041 - 14499095
Alignment:
Q  16 gagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||||||||||||||||| |||||||||| ||||| |||||||| |||||    
T  14499041 gagagaaaattgtcacaaaaattgttataaaatggttgtacaaatatcaattctc 14499095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 1416055 - 1416110
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||| |||||||||||||||||||| ||||||||| | | |||||||||||||||    
T  1416055 agagaaaaaattgtcacaaaaattatcataaaatgaatatttaaatatcatttctc 1416110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 40358128 - 40358183
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||| |||||||||||||||||||||| |||||  ||||| ||||||||||||||    
T  40358128 agagaaaaaattgtcacaaaaattattaaaaaatagttgtagaaatatcatttctc 40358183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 3771413 - 3771371
Alignment:
Q  28 tcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||||||||| |||||||||||| ||||||||||||||    
T  3771413 tcacaaaaattattaaaaaatgattgtacaaatatcatttctc 3771371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 5361848 - 5361798
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcattt 67  Q
    ||||||||||||||||  |||||||||| |||||||||||| |||||||||||    
T  5361848 agagagaaaattgtca--aaaattattagaaaatgattgtacaaatatcattt 5361798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 12070903 - 12070850
Alignment:
Q  16 gagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttct 69  Q
    |||||||| |||||||||||||| ||| |||||||||||| | |||||||||||    
T  12070903 gagagaaagttgtcacaaaaattgttagaaaatgattgtacatatatcatttct 12070850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 38874635 - 38874686
Alignment:
Q  18 gagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||||||| |||||| |||||| |||| |||||||||||||||    
T  38874635 gagaaaattgtcacaaaagttatta-aaaatggttgtttaaatatcatttctc 38874686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 6336307 - 6336252
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| ||||||||||| || ||| |||||| ||||| ||||||||||||||    
T  6336307 agagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctc 6336252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 13850201 - 13850255
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| |||| |||||||||||   |||||||||||||||||||||||||||    
T  13850201 agagagaaagttgt-acaaaaattatatcaaaatgattgtataaatatcatttctc 13850255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 19916710 - 19916655
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| |||||||||||||||||| ||| || ||||  ||||||||||||||    
T  19916710 agagagaaagttgtcacaaaaattattaaaaagtggttgttcaaatatcatttctc 19916655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 32498975 - 32498928
Alignment:
Q  23 aattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||  |||| |||||| |||||||||||||||||||||||||||    
T  32498975 aattgtcttaaaagttattagaaaatgattgtataaatatcatttctc 32498928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 34372901 - 34372847
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||||| ||||||| ||| ||||| |||||| ||||||||||||||    
T  34372901 agagagaaaattgtca-aaaaattgttagaaaataattgtagaaatatcatttctc 34372847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 35334567 - 35334520
Alignment:
Q  23 aattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||| |||||| ||||||||||||| ||||| ||||||||||||||    
T  35334567 aattgttacaaaagttattataaaatggttgtacaaatatcatttctc 35334520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 7502444 - 7502498
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttct 69  Q
    ||||||||| |||||||||||||| | | |||||| ||||| |||||||||||||    
T  7502444 agagagaaagttgtcacaaaaattgtcaaaaaatggttgtacaaatatcatttct 7502498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 13438844 - 13438898
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttct 69  Q
    |||||||||||| ||| |||| ||||||||||||| ||||  |||||||||||||    
T  13438844 agagagaaaattatcataaaagttattataaaatggttgttcaaatatcatttct 13438898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 24766206 - 24766152
Alignment:
Q  16 gagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||| ||| ||||||||||| |||||| |||||| ||||| ||||||||||||||    
T  24766206 gagataaagttgtcacaaaagttattaaaaaatggttgtacaaatatcatttctc 24766152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 32869879 - 32869829
Alignment:
Q  17 agagaaaattgtcacaaaaattattataaaatgattgtataaatatcattt 67  Q
    ||||||| |||||||||||||||| ||||||||| |||  |||||||||||    
T  32869879 agagaaagttgtcacaaaaattatcataaaatgaatgttcaaatatcattt 32869829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 4319810 - 4319769
Alignment:
Q  29 cacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||||||||||||||  ||||| ||||||||||||||    
T  4319810 cacaaaaattattataaaatagttgtacaaatatcatttctc 4319769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 29192668 - 29192719
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcattt 67  Q
    |||||||||||| ||| ||||||||||| |||||| ||||| |||||||||||    
T  29192668 agagagaaaattatca-aaaaattattaaaaaatggttgtacaaatatcattt 29192719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 54801504 - 54801558
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||    
T  54801504 agagagaaaattgt-acaaaaattataataaaatgattgtacaaatatcatttctc 54801558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 3078924 - 3078979
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| ||||||||||| || ||| |||||||||||| ||||||||||||||    
T  3078924 agagagaaagttgtcacaaaagttgttacaaaatgattgtacaaatatcatttctc 3078979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 31469005 - 31469060
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||||||||||||| ||| |||||| ||||| | ||||||||||||    
T  31469005 agagagaaaattgtcacaaaaattgttagaaaatggttgtacatatatcatttctc 31469060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 31559593 - 31559538
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||||||||  ||||| | |||||||||||| ||||||||||||||    
T  31559593 agagagaaaattgtcacaactattatcaaaaaatgattgtacaaatatcatttctc 31559538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 36123476 - 36123531
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| |||||| |||| || |||||||||||||||| ||||||||||||||    
T  36123476 agagagaaagttgtcataaaagttgttataaaatgattgtacaaatatcatttctc 36123531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 39158160 - 39158105
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| |||||||||||||||| | |||||||||||  ||||||||||||||    
T  39158160 agagagaaagttgtcacaaaaattatcaaaaaatgattgttcaaatatcatttctc 39158105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 40348848 - 40348794
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||||||||||||||||||| || |||||||||||  ||||||||||||||    
T  40348848 agagagaaaattgtcacaaaaatta-taaaaaatgattgttcaaatatcatttctc 40348794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 44257746 - 44257801
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| |||||||||||||| ||| |||||||||| | ||||||||||||||    
T  44257746 agagagaaagttgtcacaaaaattgttagaaaatgattgcacaaatatcatttctc 44257801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 47288137 - 47288082
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| |||||||||||||| ||| |||||| ||||| ||||||||||||||    
T  47288137 agagagaaagttgtcacaaaaattgttacaaaatggttgtacaaatatcatttctc 47288082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 55996476 - 55996422
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||||| ||||||| ||| |||||||||||| ||||||||||||||    
T  55996476 agagagaaaattgtca-aaaaattgttagaaaatgattgtacaaatatcatttctc 55996422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 56474780 - 56474835
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||||||||||||| | | |||||||||||  ||||||||||||||    
T  56474780 agagagaaaattgtcacaaaaattgtaaaaaaatgattgttcaaatatcatttctc 56474835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 40308493 - 40308444
Alignment:
Q  17 agagaaaattgtcacaaaaattattataaaatgattgtataaatatcattt 67  Q
    ||||||| |||||| |||||||||||||||||||||||| |||||||||||    
T  40308493 agagaaagttgtca-aaaaattattataaaatgattgtacaaatatcattt 40308444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 70
Target Start/End: Complemental strand, 52697521 - 52697483
Alignment:
Q  32 aaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  52697521 aaaaattattaaaaaatgattgtataaatatcatttctc 52697483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 21392623 - 21392570
Alignment:
Q  17 agagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||  ||||||||||||||||| |||||||||||  ||||||||||||||    
T  21392623 agagaaagctgtcacaaaaattattacaaaatgattgttcaaatatcatttctc 21392570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 53463092 - 53463141
Alignment:
Q  21 aaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||| ||||||||| |||||||||| ||||| ||||||||||||||    
T  53463092 aaaattgtaacaaaaattgttataaaatggttgtacaaatatcatttctc 53463141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 149501 - 149556
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| |||||||||||||||| | ||| |||||||  ||||||||||||||    
T  149501 agagagaaagttgtcacaaaaattatcaaaaagtgattgttcaaatatcatttctc 149556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 14443253 - 14443198
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||||||||||||||| || | | |||||||||||  ||||||||||||||    
T  14443253 agagagaaaattgtcacaaaagttgtcaaaaaatgattgttcaaatatcatttctc 14443198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 32696805 - 32696860
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||| |||||||| || ||| |||||| ||||| ||||||||||||||    
T  32696805 agagagaaaattatcacaaaagttgttagaaaatggttgtacaaatatcatttctc 32696860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 70
Target Start/End: Complemental strand, 40258244 - 40258205
Alignment:
Q  31 caaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||| |||||||| ||||||||||||||||||||    
T  40258244 caaaaattatcataaaatggttgtataaatatcatttctc 40258205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 40335843 - 40335789
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| |||||| ||||||| | |||||||||||||| ||||||||||||||    
T  40335843 agagagaaagttgtca-aaaaattgtaataaaatgattgtacaaatatcatttctc 40335789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 40721981 - 40722035
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| ||||| |||||||||||||||||||  |||| ||||||||||||||    
T  40721981 agagagaaagttgtc-caaaaattattataaaatggatgtacaaatatcatttctc 40722035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 44571441 - 44571495
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||| ||| ||||||||||| ||| | |||||||||||||||||||||    
T  44571441 agagagaaaattatca-aaaaattattacaaattaattgtataaatatcatttctc 44571495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 49585049 - 49584994
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| ||||| |||||||||||| |||||| | ||| ||||||||||||||    
T  49585049 agagagaaagttgtcccaaaaattattagaaaatggtcgtagaaatatcatttctc 49584994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 52263895 - 52263950
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| |||| | ||||||||| | |||||||||||||||||||||| ||||    
T  52263895 agagagaaagttgttataaaaattatcaaaaaatgattgtataaatatcatgtctc 52263950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 53384344 - 53384398
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||| |||||| |||||| ||| |||||||| ||||||||||||||    
T  53384344 agagagaaaattgt-acaaaagttattacaaattgattgtacaaatatcatttctc 53384398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 14113645 - 14113683
Alignment:
Q  29 cacaaaaattattataaaatgattgtataaatatcattt 67  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  14113645 cacaaaaattgtcataaaatgattgtataaatatcattt 14113683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 70
Target Start/End: Complemental strand, 28203430 - 28203392
Alignment:
Q  32 aaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  28203430 aaaaattattacaaaatgattgtacaaatatcatttctc 28203392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 48649573 - 48649519
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttct 69  Q
    ||||||||||||||||||||| || ||| |||||| ||||| |||||||| ||||    
T  48649573 agagagaaaattgtcacaaaagttgttagaaaatggttgtaaaaatatcacttct 48649519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 70
Target Start/End: Complemental strand, 55960227 - 55960189
Alignment:
Q  32 aaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  55960227 aaaaattataataaaataattgtataaatatcatttctc 55960189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 30866405 - 30866353
Alignment:
Q  17 agagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||| |||||| |||| |||| |||||||||||||| ||||||||||||||    
T  30866405 agagaaagttgtca-aaaatttatcataaaatgattgtacaaatatcatttctc 30866353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 1872645 - 1872589
Alignment:
Q  16 gagagaaaa-ttgtcacaaaaattattataaaatg-attgtataaatatcatttctc 70  Q
    ||||||||| |||| ||||||||||||| |||||| |||||| ||||||||||||||    
T  1872645 gagagaaaagttgttacaaaaattattacaaaatggattgtagaaatatcatttctc 1872589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 19879812 - 19879776
Alignment:
Q  31 caaaaattattataaaatgattgtataaatatcattt 67  Q
    |||||||||| |||||||||||||| |||||||||||    
T  19879812 caaaaattatcataaaatgattgtacaaatatcattt 19879776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 30536046 - 30535991
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| |||||||||||||| ||| |||||||||||| ||||||||||||||    
T  30536046 agagagaaagttgtcacaaaaattgttaaaaaatgattgtacaaatatcatttctc 30535991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 52437549 - 52437494
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| |||||||||||||||||| |||||| ||||||| ||||||||||||    
T  52437549 agagagaaagttgtcacaaaaattattaaaaaatggttgtatatatatcatttctc 52437494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 12306152 - 12306205
Alignment:
Q  17 agagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||| ||||||||||| ||||||||| |||||| ||||||||||||||    
T  12306152 agagaaaattatcacaaaaattgttataaaataattgtacaaatatcatttctc 12306205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 44723415 - 44723363
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcattt 67  Q
    ||||||||| |||||||||||||||||||||||| | |||| |||||||||||    
T  44723415 agagagaaagttgtcacaaaaattattataaaataaatgtacaaatatcattt 44723363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 1689446 - 1689391
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| |||||||||||||| |||||||||  ||||| ||||||||||||||    
T  1689446 agagagaaagttgtcacaaaaattgttataaaatagttgtacaaatatcatttctc 1689391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 45863741 - 45863792
Alignment:
Q  19 agaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||||||||||| | ||||| |||||| ||||||||||||||    
T  45863741 agaaaattgtcacaaaaattatcaaaaaataattgtacaaatatcatttctc 45863792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 46281491 - 46281436
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| |||||||||||||||||| |||||  ||||| ||||||||||||||    
T  46281491 agagagaaagttgtcacaaaaattattacaaaatagttgtacaaatatcatttctc 46281436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 49931608 - 49931553
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| ||||||||||| || ||| |||||||||||| ||||||||||||||    
T  49931608 agagagaaagttgtcacaaaagttgttaaaaaatgattgtacaaatatcatttctc 49931553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 23671073 - 23671123
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcat 65  Q
    |||||||||||||||| |||| |||||| ||| ||||||||||||||||||    
T  23671073 agagagaaaattgtcataaaagttattagaaattgattgtataaatatcat 23671123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 43755697 - 43755749
Alignment:
Q  17 agagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||| ||||||||| |||||||| ||||| ||||||||||||||    
T  43755697 agagaaaattgtca-aaaaattatcataaaatggttgtacaaatatcatttctc 43755749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 45430854 - 45430802
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcattt 67  Q
    |||| ||||||| ||||||||||||||| ||||| |||||| |||||||||||    
T  45430854 agagcgaaaattatcacaaaaattattaaaaaataattgtacaaatatcattt 45430802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 740972 - 741027
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||| |||||||||| || ||| |||||  ||||||||||||||||||||    
T  740972 agagagaaaaatgtcacaaaagttgttagaaaatagttgtataaatatcatttctc 741027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 5771764 - 5771819
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| |||||||||||||||| | ||| |||||||  ||||||||||||||    
T  5771764 agagagaaagttgtcacaaaaattatcaaaaagtgattgttcaaatatcatttctc 5771819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 11947850 - 11947795
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| ||||||||||| || | |||||||| ||||| ||||||||||||||    
T  11947850 agagagaaagttgtcacaaaagttgtcataaaatggttgtacaaatatcatttctc 11947795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 21433417 - 21433472
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| ||||||||||| || ||| |||||| ||||| ||||||||||||||    
T  21433417 agagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctc 21433472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 27563538 - 27563484
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||||| |||||||||   |||||||||||| ||||||||||||||    
T  27563538 agagagaaaattgtca-aaaaattatagcaaaatgattgtacaaatatcatttctc 27563484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 30804280 - 30804229
Alignment:
Q  16 gagagaaaattgtcacaaaaattattataaaatgattgtataaatatcattt 67  Q
    |||||| |||||||  ||||||| | ||||||||||||||||||||||||||    
T  30804280 gagagagaattgtctaaaaaattgtcataaaatgattgtataaatatcattt 30804229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 33125343 - 33125394
Alignment:
Q  19 agaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||||||||||| ||||||||  |||  ||||||||||||||    
T  33125343 agaaaattgtcacaaaaattatcataaaatggatgttcaaatatcatttctc 33125394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 40118732 - 40118786
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||| |||||||||||   |||||||||||| ||||||||||||||    
T  40118732 agagagaaaattgt-acaaaaattatacaaaaatgattgtacaaatatcatttctc 40118786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 44672047 - 44672101
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||||| |||| || ||| |||||||||||| ||||||||||||||    
T  44672047 agagagaaaattgtca-aaaagttgttaaaaaatgattgtacaaatatcatttctc 44672101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 49020420 - 49020475
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||| ||||||||||||||| || ||| |||||| ||||| ||||||||||||||    
T  49020420 agagaaaaaattgtcacaaaagttgttaaaaaatggttgtacaaatatcatttctc 49020475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 50775173 - 50775224
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatt 66  Q
    ||||||||| |||||||||||||| | | ||||| |||||||||||||||||    
T  50775173 agagagaaagttgtcacaaaaattgtcaaaaaataattgtataaatatcatt 50775224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 52283716 - 52283771
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||||| ||| ||||| | |||||| ||||| ||||||||||||||    
T  52283716 agagagaaaattgtcataaatattatcaaaaaatggttgtagaaatatcatttctc 52283771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 33173713 - 33173759
Alignment:
Q  21 aaaattgtcacaaaaattattataaaatgattgtataaatatcattt 67  Q
    |||||||||||||||||||| | ||||| |||||| |||||||||||    
T  33173713 aaaattgtcacaaaaattataaaaaaataattgtacaaatatcattt 33173759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 70
Target Start/End: Complemental strand, 42615898 - 42615860
Alignment:
Q  32 aaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  42615898 aaaaattattaaaaaatgattgtacaaatatcatttctc 42615860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 26501498 - 26501550
Alignment:
Q  17 agagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||||||||||||| || ||| |||||| |||||||||||| |||||||    
T  26501498 agagaaaattgtcacaaaagttgtta-aaaatggttgtataaatataatttctc 26501550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 30973605 - 30973552
Alignment:
Q  17 agagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||| |||||||||||||| ||| |||| | ||||| ||||||||||||||    
T  30973605 agagaaagttgtcacaaaaattgttagaaaagggttgtacaaatatcatttctc 30973552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 32926314 - 32926261
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttc 68  Q
    ||||| |||||| |||||||| |||| |||||||||||||  ||||||||||||    
T  32926314 agagaaaaaattatcacaaaagttatcataaaatgattgttcaaatatcatttc 32926261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 33660093 - 33660045
Alignment:
Q  17 agagaaaattgtcacaaaaattattataaaatgattgtataaatatcatt 66  Q
    |||||||||| || |||||||||||||||||||| |||| ||||||||||    
T  33660093 agagaaaattatc-caaaaattattataaaatgaatgtacaaatatcatt 33660045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 38114291 - 38114332
Alignment:
Q  14 cagagagaaaattgtcacaaaaattattataaaatgattgta 55  Q
    |||||||||| |||||||||||||| |||||||||| |||||    
T  38114291 cagagagaaagttgtcacaaaaattgttataaaatggttgta 38114332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 1922451 - 1922495
Alignment:
Q  25 ttgtcacaaaaattattataaaatgattgtataaatatcatttct 69  Q
    |||||||||||||||| | ||| |||||||| |||||||||||||    
T  1922451 ttgtcacaaaaattatcaaaaagtgattgtacaaatatcatttct 1922495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 35026944 - 35026891
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||| ||||||||||||||  |||| ||||||||||| || ||||||||||||||    
T  35026944 agagaaaaaattgtcacaaa--ttatcataaaatgattatacaaatatcatttctc 35026891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 47113328 - 47113277
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcattt 67  Q
    ||||||||| ||||| |||||||||||  |||||||||||| |||||||||||    
T  47113328 agagagaaagttgtc-caaaaattattgcaaaatgattgtacaaatatcattt 47113277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 45657786 - 45657840
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttct 69  Q
    ||||||||  |||||||||||||| ||| ||||||||||||||||||||||||||    
T  45657786 agagagaacgttgtcacaaaaattgttagaaaatgattgtataaatatcatttct 45657840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 349431 - 349484
Alignment:
Q  17 agagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||| ||| ||||||||||||||||||||| ||||| ||||||||||||||    
T  349431 agagaaagttgccacaaaaattattataaaatggttgtacaaatatcatttctc 349484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 42672291 - 42672239
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcattt 67  Q
    ||||| ||| |||||||||||||||||| ||| ||||||||||||||||||||    
T  42672291 agagataaagttgtcacaaaaattattaaaaagtgattgtataaatatcattt 42672239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 9311095 - 9311040
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| |||||||||| ||||| | |||||||||||| ||||||||||||||    
T  9311095 agagagaaagttgtcacaaatattatcagaaaatgattgtacaaatatcatttctc 9311040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 19150335 - 19150390
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| ||||||||||| || ||| |||||||||||| ||||||||||||||    
T  19150335 agagagaaagttgtcacaaaagttgttaaaaaatgattgtacaaatatcatttctc 19150390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 26550292 - 26550237
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| |||||||||||||||||| |||||| ||||  ||||||||||||||    
T  26550292 agagagaaagttgtcacaaaaattattaaaaaatggttgtgcaaatatcatttctc 26550237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 27168698 - 27168753
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| |||||||||||||||||| |||||| ||||  ||||||||||||||    
T  27168698 agagagaaagttgtcacaaaaattattaaaaaatggttgttcaaatatcatttctc 27168753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 28920066 - 28920121
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| ||||||||||||||||||| ||||  ||||| ||||||||||||||    
T  28920066 agagagaaagttgtcacaaaaattattatcaaatagttgtacaaatatcatttctc 28920121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 38363241 - 38363292
Alignment:
Q  19 agaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  38363241 agaaaattgtcataaaaattattaaaaaataattgtacaaatatcatttctc 38363292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 52089959 - 52090011
Alignment:
Q  17 agagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||| ||||||||||| |||||||||||||||||| ||||||||| |||||    
T  52089959 agagaaagttgtcacaaaa-ttattataaaatgattgtttaaatatcaattctc 52090011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 29222432 - 29222468
Alignment:
Q  31 caaaaattattataaaatgattgtataaatatcattt 67  Q
    |||||||||| ||||||||||||||||||||||||||    
T  29222432 caaaaattatcataaaatgattgtataaatatcattt 29222468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 48911481 - 48911533
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcattt 67  Q
    |||||||||||| ||| ||| ||||||| ||| ||||||||||||||||||||    
T  48911481 agagagaaaattatcaaaaatattattacaaagtgattgtataaatatcattt 48911533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 24095422 - 24095477
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| |||||||||||||||| ||||||||  |||  ||||||||||||||    
T  24095422 agagagaaagttgtcacaaaaattatcataaaatggatgttcaaatatcatttctc 24095477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 26772423 - 26772384
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgt 54  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  26772423 agagagaaagttgtcacaaaaattattataaaatggttgt 26772384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 29573372 - 29573427
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| ||||||||||| || ||| |||||| ||||| ||||||||||||||    
T  29573372 agagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctc 29573427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 31017411 - 31017465
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||||| |||| || ||| |||||||||||| ||||||||||||||    
T  31017411 agagagaaaattgtca-aaaagttgttagaaaatgattgtacaaatatcatttctc 31017465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 33256364 - 33256309
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||||| ||||||| |   |||||| ||||||||||||||||||||    
T  33256364 agagagaaaattgtcataaaaattgtctcaaaatggttgtataaatatcatttctc 33256309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 37894259 - 37894314
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| ||||||||||| || ||| |||||| ||||| ||||||||||||||    
T  37894259 agagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctc 37894314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 38671672 - 38671618
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||||||||||||||||||| || |||||| ||||  ||||||||||||||    
T  38671672 agagagaaaattgtcacaaaaatta-taaaaaatggttgttcaaatatcatttctc 38671618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 45186568 - 45186623
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| |||||||||||||| ||| |||||| ||||| ||||||| ||||||    
T  45186568 agagagaaagttgtcacaaaaattgttagaaaatggttgtacaaatatcttttctc 45186623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 48205099 - 48205045
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||| |||||||||||   |||||||||||| ||||||||||||||    
T  48205099 agagagaaaattgt-acaaaaattatacaaaaatgattgtacaaatatcatttctc 48205045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 48287722 - 48287671
Alignment:
Q  19 agaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||| |||||||| || |||||||||| ||||| ||||||||||||||    
T  48287722 agaaaattatcacaaaagttgttataaaatggttgtacaaatatcatttctc 48287671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 52963332 - 52963387
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||| ||||||||||||||| || ||| |||||| ||||| ||||||||||||||    
T  52963332 agagaaaaaattgtcacaaaagttgttaaaaaatggttgtacaaatatcatttctc 52963387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 70
Target Start/End: Original strand, 32622396 - 32622434
Alignment:
Q  32 aaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  32622396 aaaaattatcaaaaaatgattgtataaatatcatttctc 32622434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 40419659 - 40419712
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttct 69  Q
    |||||||||||||||  ||||||||| | |||||||||||| |||||||||||||    
T  40419659 agagagaaaattgtct-aaaaattatcacaaaatgattgtacaaatatcatttct 40419712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 52727466 - 52727519
Alignment:
Q  16 gagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||| |||||| ||||||||| ||||| |||||||| ||||||||||||||    
T  52727466 gagagaaagttgtca-aaaaattatcataaagtgattgtacaaatatcatttctc 52727519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 29705955 - 29705903
Alignment:
Q  17 agagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||| ||| ||||||||| | ||||| |||||||||||||||||||||    
T  29705955 agagaaaattatca-aaaaattatcacaaaataattgtataaatatcatttctc 29705903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 42683880 - 42683827
Alignment:
Q  17 agagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||| ||||||||||| | ||||||| |||  ||||||||||||||    
T  42683880 agagaaaattgtaacaaaaattatcacaaaatgaatgttcaaatatcatttctc 42683827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 43143571 - 43143518
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttc 68  Q
    ||||||||||||||||||||||||  || ||||| |||||| |||||| |||||    
T  43143571 agagagaaaattgtcacaaaaattgataaaaaataattgtacaaatatgatttc 43143518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 52100313 - 52100261
Alignment:
Q  17 agagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||| |||| ||||||||||||| |||||| ||||| ||||||||||||||    
T  52100313 agagaaagttgt-acaaaaattattaaaaaatggttgtacaaatatcatttctc 52100261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 53681164 - 53681111
Alignment:
Q  17 agagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||| ||||||||||||||| ||| || ||||  ||||||||||||||    
T  53681164 agagaaaattatcacaaaaattattaaaaagtggttgttcaaatatcatttctc 53681111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 41369651 - 41369600
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcattt 67  Q
    ||||||||| |||||| ||||||||||| |||||| ||||| |||||||||||    
T  41369651 agagagaaagttgtca-aaaaattattagaaaatggttgtacaaatatcattt 41369600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 3939 - 3991
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcattt 67  Q
    |||||||||||| || |||||||||| | ||||||||||||||||||||||||    
T  3939 agagagaaaattatctcaaaaattatcacaaaatgattgtataaatatcattt 3991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000005; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 25142567 - 25142619
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcattt 67  Q
    |||||||||||||||||||||||| |||||||||||| ||  |||||||||||    
T  25142567 agagagaaaattgtcacaaaaattgttataaaatgatcgtccaaatatcattt 25142619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 11014048 - 11013997
Alignment:
Q  19 agaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||| |||||||| |||||| |||||||||||| ||||||||||||||    
T  11014048 agaaaattatcacaaaagttattacaaaatgattgtagaaatatcatttctc 11013997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 16368067 - 16368118
Alignment:
Q  19 agaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||| |||| |||||||||||||||||||| ||||| ||||||||||||||    
T  16368067 agaaagttgttacaaaaattattataaaatggttgtacaaatatcatttctc 16368118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 34570611 - 34570663
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcattt 67  Q
    ||||||||| ||||||||||| |||||| |||||| ||||| |||||||||||    
T  34570611 agagagaaagttgtcacaaaagttattacaaaatggttgtacaaatatcattt 34570663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 2242038 - 2242093
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| |||||||||||||| | | |||||||||||  ||||||||||||||    
T  2242038 agagagaaagttgtcacaaaaattgtcaaaaaatgattgttcaaatatcatttctc 2242093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 16337939 - 16337994
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| |||| |||||| ||||||||||||| |||||  |||||||||||||    
T  16337939 agagagaaagttgttacaaaagttattataaaatggttgtaccaatatcatttctc 16337994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 17182154 - 17182099
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||||||||||||||| | |||||  ||||  ||||||||||||||    
T  17182154 agagagaaaattgtcacaaaaattatcaaaaaatagttgttaaaatatcatttctc 17182099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 18141317 - 18141372
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| ||||||||||| || | ||||||||| ||| |||||||||||||||    
T  18141317 agagagaaagttgtcacaaaagttgtcataaaatgaatgtttaaatatcatttctc 18141372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 27102169 - 27102115
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||| |||||||||| ||||||||||| |||||| ||||| ||||||||||||||    
T  27102169 agagaaaaaattgtca-aaaaattattagaaaatggttgtacaaatatcatttctc 27102115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 27143991 - 27143937
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||| |||||||||| ||||||||||| |||||| ||||| ||||||||||||||    
T  27143991 agagaaaaaattgtca-aaaaattattagaaaatggttgtacaaatatcatttctc 27143937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 70
Target Start/End: Original strand, 7636461 - 7636499
Alignment:
Q  32 aaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||| ||||||||||||||||||| ||||||||||||||    
T  7636461 aaaagttattataaaatgattgtacaaatatcatttctc 7636499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 70
Target Start/End: Original strand, 26396508 - 26396546
Alignment:
Q  32 aaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  26396508 aaaaattattataaaataattgtacaaatatcatttctc 26396546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 27612929 - 27612876
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttct 69  Q
    |||||||||||||||| |||| |||||||||||| |||||  |||||||||||||    
T  27612929 agagagaaaattgtcataaaa-ttattataaaataattgttcaaatatcatttct 27612876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 2822259 - 2822222
Alignment:
Q  33 aaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  2822259 aaaattattataaaatggttgtacaaatatcatttctc 2822222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 16352183 - 16352219
Alignment:
Q  33 aaaattattataaaatgattgtataaatatcatttct 69  Q
    |||||| |||||||||| |||||||||||||||||||    
T  16352183 aaaattgttataaaatggttgtataaatatcatttct 16352219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 25127848 - 25127904
Alignment:
Q  14 cagagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||| || |||||||| || ||| |||||| ||||| ||||||||||||||    
T  25127848 cagagagaaagttttcacaaaagttgttacaaaatggttgtacaaatatcatttctc 25127904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 70
Target Start/End: Original strand, 26839534 - 26839574
Alignment:
Q  30 acaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||||||| ||||| |||||||||||||| ||||||    
T  26839534 acaaaaattattacaaaataattgtataaatatcgtttctc 26839574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 28630153 - 28630113
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgta 55  Q
    ||||||||| ||||||||||||||| ||||||||| |||||    
T  28630153 agagagaaagttgtcacaaaaattactataaaatggttgta 28630113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 29197778 - 29197727
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcattt 67  Q
    ||||||||||||||| |||||||||| | |||||||||||| |||||| ||||    
T  29197778 agagagaaaattgtc-caaaaattatcacaaaatgattgtacaaatattattt 29197727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 70
Target Start/End: Original strand, 31417339 - 31417367
Alignment:
Q  42 ataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||||||||||||||||||    
T  31417339 ataaaatgattgtataaatatcatttctc 31417367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 9829 - 9776
Alignment:
Q  17 agagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||| |||||||||||||||| | |||||| ||||| ||||||||||||||    
T  9829 agagaaagttgtcacaaaaattataaaaaaatggttgtacaaatatcatttctc 9776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 8527 - 8472
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||| |||||| ||||||| ||| |||||||||||  ||||||||||||||    
T  8527 agagagaaagttgtcataaaaattgttaaaaaatgattgttcaaatatcatttctc 8472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 9865 - 9919
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    |||||||||||||||| ||||||| | | |||||||||||| ||||||||||||||    
T  9865 agagagaaaattgtca-aaaaattgtgaaaaaatgattgtacaaatatcatttctc 9919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 26470 - 26421
Alignment:
Q  21 aaaattgtcacaaaaattattataaaatgattgtataaatatcatttctc 70  Q
    ||||||||||||||| |||| |||||| | |||| |||||||||||||||    
T  26470 aaaattgtcacaaaagttatcataaaacggttgtttaaatatcatttctc 26421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 469654 - 469702
Alignment:
Q  15 agagagaaaattgtcacaaaaattattataaaatgattgtataaatatc 63  Q
    ||||||||| |||||||||||||||| | |||||| ||||| |||||||    
T  469654 agagagaaagttgtcacaaaaattatcaaaaaatggttgtacaaatatc 469702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University