View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8508_low_67 (Length: 246)

Name: NF8508_low_67
Description: NF8508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8508_low_67
NF8508_low_67
[»] chr6 (24 HSPs)
chr6 (65-229)||(18048928-18049092)
chr6 (4-44)||(16368079-16368119)
chr6 (6-46)||(28670523-28670563)
chr6 (5-44)||(11635616-11635655)
chr6 (6-44)||(2822221-2822259)
chr6 (7-52)||(21857602-21857648)
chr6 (5-42)||(736853-736890)
chr6 (5-44)||(11785354-11785393)
chr6 (5-40)||(29172993-29173028)
chr6 (5-43)||(16743299-16743337)
chr6 (5-43)||(27102115-27102153)
chr6 (5-43)||(27143937-27143975)
chr6 (6-44)||(32253779-32253817)
chr6 (4-45)||(3401082-3401123)
chr6 (1-45)||(7636456-7636501)
chr6 (15-44)||(16328733-16328762)
chr6 (15-44)||(19789119-19789148)
chr6 (5-46)||(26396508-26396549)
chr6 (4-44)||(3339531-3339571)
chr6 (2-42)||(7577216-7577256)
chr6 (17-45)||(15364656-15364684)
chr6 (4-44)||(16337955-16337995)
chr6 (4-44)||(21393609-21393649)
chr6 (4-44)||(31204842-31204882)
[»] chr4 (68 HSPs)
chr4 (5-52)||(12074184-12074231)
chr4 (1-44)||(33484137-33484180)
chr4 (5-44)||(35661630-35661669)
chr4 (5-44)||(36444428-36444467)
chr4 (4-43)||(40258205-40258244)
chr4 (4-51)||(54801519-54801566)
chr4 (5-43)||(35332706-35332744)
chr4 (1-43)||(40721993-40722035)
chr4 (4-46)||(50506390-50506432)
chr4 (4-46)||(53463102-53463144)
chr4 (1-42)||(6912638-6912679)
chr4 (4-45)||(24088596-24088637)
chr4 (5-42)||(45548817-45548854)
chr4 (2-46)||(13267508-13267552)
chr4 (4-40)||(19879776-19879812)
chr4 (6-42)||(32464638-32464674)
chr4 (5-53)||(36058395-36058443)
chr4 (17-53)||(47998584-47998620)
chr4 (4-43)||(3475869-3475908)
chr4 (13-44)||(11012140-11012171)
chr4 (4-43)||(32901329-32901368)
chr4 (1-40)||(33575078-33575117)
chr4 (5-44)||(43168747-43168786)
chr4 (5-44)||(44170652-44170691)
chr4 (1-43)||(8680941-8680983)
chr4 (5-43)||(13139148-13139186)
chr4 (5-43)||(30866353-30866391)
chr4 (4-46)||(45521611-45521653)
chr4 (16-45)||(1987757-1987786)
chr4 (17-54)||(8810560-8810597)
chr4 (5-46)||(9472546-9472587)
chr4 (16-45)||(9828016-9828045)
chr4 (15-44)||(27384186-27384215)
chr4 (4-45)||(29227275-29227316)
chr4 (17-46)||(29513741-29513770)
chr4 (13-46)||(30973594-30973627)
chr4 (5-46)||(31147228-31147269)
chr4 (4-41)||(32130268-32130305)
chr4 (17-46)||(32696834-32696863)
chr4 (6-43)||(36413349-36413386)
chr4 (4-45)||(51359822-51359863)
chr4 (5-42)||(52224094-52224131)
chr4 (4-45)||(53654782-53654823)
chr4 (17-46)||(56025253-56025282)
chr4 (4-44)||(2999111-2999151)
chr4 (17-45)||(4577555-4577583)
chr4 (17-45)||(10994197-10994225)
chr4 (4-40)||(12074475-12074511)
chr4 (4-44)||(12595663-12595703)
chr4 (1-45)||(20056394-20056438)
chr4 (6-46)||(26440673-26440713)
chr4 (6-46)||(26718377-26718417)
chr4 (6-46)||(26731005-26731045)
chr4 (17-45)||(29863549-29863577)
chr4 (17-45)||(31318751-31318779)
chr4 (9-45)||(31559536-31559572)
chr4 (5-45)||(31804362-31804402)
chr4 (4-40)||(32303317-32303353)
chr4 (17-45)||(34259813-34259841)
chr4 (4-44)||(36728654-36728694)
chr4 (4-44)||(39158104-39158144)
chr4 (5-45)||(40308439-40308479)
chr4 (17-45)||(40755919-40755947)
chr4 (4-44)||(41609711-41609751)
chr4 (4-44)||(44626604-44626644)
chr4 (4-44)||(47288081-47288121)
chr4 (4-40)||(52895230-52895266)
chr4 (16-44)||(54165205-54165233)
[»] chr1 (61 HSPs)
chr1 (5-44)||(43755711-43755750)
chr1 (5-43)||(49699785-49699823)
chr1 (4-44)||(29706735-29706775)
chr1 (5-44)||(23554750-23554789)
chr1 (1-44)||(27352629-27352672)
chr1 (1-43)||(3919300-3919342)
chr1 (1-47)||(43457848-43457894)
chr1 (10-55)||(29489397-29489442)
chr1 (10-43)||(31847223-31847256)
chr1 (4-45)||(32873339-32873380)
chr1 (3-44)||(35848411-35848452)
chr1 (5-46)||(39669803-39669844)
chr1 (1-46)||(51193160-51193205)
chr1 (4-44)||(11947794-11947834)
chr1 (2-46)||(26101391-26101435)
chr1 (1-45)||(26501293-26501337)
chr1 (4-44)||(33125355-33125395)
chr1 (7-47)||(35026887-35026927)
chr1 (15-51)||(47386837-47386873)
chr1 (5-44)||(30439249-30439288)
chr1 (13-44)||(43612110-43612141)
chr1 (5-44)||(48678986-48679025)
chr1 (5-44)||(49596234-49596273)
chr1 (5-44)||(50062007-50062046)
chr1 (5-43)||(6841789-6841827)
chr1 (5-39)||(13078983-13079017)
chr1 (4-42)||(26839383-26839421)
chr1 (13-43)||(31184281-31184311)
chr1 (6-52)||(35335526-35335572)
chr1 (13-43)||(40139126-40139156)
chr1 (5-43)||(40605454-40605492)
chr1 (5-43)||(42299219-42299257)
chr1 (6-44)||(48325801-48325839)
chr1 (5-43)||(49621363-49621401)
chr1 (4-45)||(1689389-1689430)
chr1 (4-45)||(7371980-7372021)
chr1 (17-46)||(8577547-8577576)
chr1 (4-53)||(12812179-12812228)
chr1 (5-46)||(14002775-14002815)
chr1 (13-46)||(17167846-17167879)
chr1 (17-50)||(21433446-21433479)
chr1 (5-54)||(23226479-23226528)
chr1 (5-42)||(39757181-39757218)
chr1 (5-42)||(39762535-39762572)
chr1 (17-46)||(48634496-48634525)
chr1 (9-46)||(52283737-52283774)
chr1 (4-44)||(4213071-4213111)
chr1 (17-45)||(12999867-12999895)
chr1 (17-45)||(18541096-18541124)
chr1 (5-45)||(25586553-25586593)
chr1 (4-40)||(25672344-25672380)
chr1 (17-45)||(25989029-25989057)
chr1 (4-44)||(26585205-26585245)
chr1 (17-45)||(34157518-34157546)
chr1 (4-44)||(36669402-36669442)
chr1 (17-45)||(41564925-41564953)
chr1 (4-44)||(42843376-42843416)
chr1 (17-45)||(43641028-43641056)
chr1 (17-45)||(43757597-43757625)
chr1 (6-46)||(44161671-44161711)
chr1 (5-45)||(44641936-44641976)
[»] chr8 (54 HSPs)
chr8 (5-43)||(20852919-20852957)
chr8 (4-44)||(6445174-6445214)
chr8 (5-44)||(3950109-3950148)
chr8 (4-46)||(4312545-4312587)
chr8 (5-43)||(29913564-29913602)
chr8 (2-44)||(33605108-33605150)
chr8 (3-44)||(999289-999330)
chr8 (5-46)||(8074757-8074798)
chr8 (6-43)||(40517269-40517306)
chr8 (13-45)||(6161946-6161978)
chr8 (4-44)||(12655921-12655961)
chr8 (7-43)||(22960452-22960488)
chr8 (5-45)||(37873138-37873178)
chr8 (1-44)||(2597188-2597231)
chr8 (5-44)||(2768146-2768185)
chr8 (24-55)||(9227257-9227288)
chr8 (4-43)||(9314411-9314450)
chr8 (4-43)||(14531621-14531660)
chr8 (5-40)||(20052839-20052874)
chr8 (17-52)||(23708967-23709002)
chr8 (5-44)||(27630896-27630935)
chr8 (5-44)||(32725813-32725852)
chr8 (5-44)||(33863281-33863320)
chr8 (5-44)||(39021476-39021515)
chr8 (13-44)||(42689840-42689871)
chr8 (4-46)||(5849598-5849640)
chr8 (1-43)||(10344324-10344366)
chr8 (5-43)||(14548856-14548894)
chr8 (5-43)||(20473779-20473817)
chr8 (17-55)||(21649213-21649251)
chr8 (4-46)||(30927963-30928005)
chr8 (4-46)||(31596945-31596987)
chr8 (5-43)||(43873724-43873762)
chr8 (15-44)||(35812158-35812187)
chr8 (2-43)||(37343374-37343415)
chr8 (17-46)||(37784419-37784448)
chr8 (5-42)||(40074858-40074895)
chr8 (5-45)||(1332501-1332541)
chr8 (5-45)||(3650111-3650151)
chr8 (17-45)||(5742702-5742730)
chr8 (5-45)||(11089574-11089614)
chr8 (4-44)||(11584095-11584135)
chr8 (4-40)||(12697745-12697781)
chr8 (13-45)||(16487608-16487640)
chr8 (4-44)||(28772156-28772196)
chr8 (10-42)||(32020492-32020524)
chr8 (17-45)||(34578422-34578450)
chr8 (4-44)||(34641544-34641584)
chr8 (4-40)||(35345423-35345459)
chr8 (1-45)||(36064028-36064072)
chr8 (17-45)||(38504168-38504196)
chr8 (17-45)||(38675601-38675629)
chr8 (4-44)||(45405530-45405570)
chr8 (17-45)||(45405853-45405881)
[»] chr5 (44 HSPs)
chr5 (4-46)||(6940182-6940224)
chr5 (5-44)||(7144576-7144615)
chr5 (4-43)||(30420626-30420665)
chr5 (1-46)||(2050924-2050969)
chr5 (2-43)||(8681843-8681884)
chr5 (4-45)||(38704229-38704270)
chr5 (8-44)||(372420-372456)
chr5 (13-45)||(8897380-8897412)
chr5 (4-44)||(21012567-21012607)
chr5 (10-46)||(35814450-35814486)
chr5 (5-44)||(4434481-4434520)
chr5 (1-44)||(14914371-14914414)
chr5 (4-43)||(28501592-28501631)
chr5 (4-39)||(33901928-33901963)
chr5 (4-43)||(34124621-34124660)
chr5 (5-44)||(38500942-38500981)
chr5 (4-43)||(40829414-40829453)
chr5 (5-44)||(42825165-42825204)
chr5 (4-46)||(189735-189777)
chr5 (4-46)||(3154675-3154717)
chr5 (10-44)||(12878755-12878789)
chr5 (4-46)||(17097834-17097876)
chr5 (3-45)||(19980438-19980480)
chr5 (10-44)||(35098770-35098804)
chr5 (5-43)||(36581498-36581536)
chr5 (17-46)||(18695315-18695344)
chr5 (4-45)||(25345338-25345379)
chr5 (17-46)||(25585501-25585530)
chr5 (4-45)||(27005511-27005552)
chr5 (5-46)||(27340866-27340907)
chr5 (6-43)||(30334789-30334826)
chr5 (5-42)||(34400619-34400656)
chr5 (5-42)||(38075719-38075756)
chr5 (5-46)||(41383387-41383428)
chr5 (5-45)||(8787189-8787229)
chr5 (17-45)||(19271857-19271885)
chr5 (4-44)||(19481214-19481254)
chr5 (4-44)||(19844341-19844381)
chr5 (4-44)||(20985561-20985601)
chr5 (4-44)||(27271083-27271123)
chr5 (16-44)||(29765829-29765857)
chr5 (15-43)||(31708370-31708398)
chr5 (4-44)||(32912037-32912077)
chr5 (18-46)||(38730860-38730888)
[»] scaffold0154 (1 HSPs)
scaffold0154 (5-46)||(4312-4353)
[»] chr7 (49 HSPs)
chr7 (4-44)||(5068655-5068695)
chr7 (1-45)||(43079661-43079705)
chr7 (1-35)||(26904731-26904765)
chr7 (1-42)||(10014984-10015025)
chr7 (13-46)||(22692081-22692114)
chr7 (4-45)||(46880900-46880941)
chr7 (5-45)||(42467202-42467242)
chr7 (5-45)||(44894506-44894546)
chr7 (5-44)||(7990078-7990117)
chr7 (5-44)||(16567315-16567354)
chr7 (5-44)||(16598308-16598347)
chr7 (4-43)||(29763830-29763869)
chr7 (4-39)||(34690956-34690991)
chr7 (13-44)||(34992365-34992396)
chr7 (5-44)||(38023457-38023496)
chr7 (4-46)||(8904439-8904481)
chr7 (5-55)||(18227894-18227944)
chr7 (5-43)||(23329902-23329940)
chr7 (5-43)||(28081815-28081853)
chr7 (4-42)||(30818029-30818067)
chr7 (6-44)||(43025808-43025846)
chr7 (4-45)||(6110010-6110051)
chr7 (6-43)||(6353725-6353762)
chr7 (2-43)||(7295450-7295491)
chr7 (16-45)||(11070226-11070255)
chr7 (4-45)||(18111644-18111685)
chr7 (17-46)||(24380755-24380784)
chr7 (15-44)||(31398123-31398152)
chr7 (5-54)||(34304711-34304760)
chr7 (18-51)||(35491457-35491490)
chr7 (15-44)||(41590563-41590592)
chr7 (13-42)||(43171214-43171243)
chr7 (5-42)||(48383351-48383388)
chr7 (17-54)||(48522145-48522182)
chr7 (4-40)||(6269369-6269405)
chr7 (4-40)||(11604714-11604750)
chr7 (4-44)||(12141898-12141938)
chr7 (4-40)||(19113919-19113955)
chr7 (17-45)||(19426578-19426606)
chr7 (4-44)||(35586805-35586845)
chr7 (4-52)||(37325851-37325899)
chr7 (4-44)||(37352109-37352149)
chr7 (4-40)||(38259066-38259102)
chr7 (16-52)||(46260136-46260172)
chr7 (5-53)||(46651662-46651710)
chr7 (4-44)||(46829478-46829518)
chr7 (4-44)||(47012602-47012642)
chr7 (4-44)||(47530323-47530363)
chr7 (17-45)||(49142551-49142579)
[»] chr3 (62 HSPs)
chr3 (4-44)||(349445-349485)
chr3 (2-46)||(50652385-50652429)
chr3 (4-43)||(21239110-21239149)
chr3 (5-40)||(22836228-22836263)
chr3 (5-44)||(35755983-35756022)
chr3 (2-45)||(43409392-43409435)
chr3 (1-44)||(43499590-43499633)
chr3 (5-44)||(47849671-47849710)
chr3 (4-43)||(51230640-51230679)
chr3 (1-44)||(53932420-53932463)
chr3 (4-46)||(24095438-24095480)
chr3 (5-43)||(28300286-28300324)
chr3 (2-44)||(39901590-39901632)
chr3 (5-54)||(52727481-52727530)
chr3 (4-44)||(20549417-20549457)
chr3 (5-45)||(53133985-53134025)
chr3 (5-44)||(35376584-35376623)
chr3 (15-46)||(48287668-48287699)
chr3 (4-43)||(52100261-52100300)
chr3 (1-43)||(1295332-1295374)
chr3 (16-46)||(10347517-10347547)
chr3 (4-46)||(10811132-10811174)
chr3 (13-43)||(19418198-19418228)
chr3 (5-43)||(20893275-20893313)
chr3 (4-54)||(29525222-29525272)
chr3 (5-43)||(31176473-31176511)
chr3 (5-43)||(37134639-37134677)
chr3 (1-43)||(37754447-37754489)
chr3 (5-39)||(41349011-41349045)
chr3 (4-46)||(44910694-44910736)
chr3 (10-44)||(46952948-46952982)
chr3 (6-44)||(52564668-52564706)
chr3 (10-44)||(55344334-55344368)
chr3 (5-43)||(55466958-55466996)
chr3 (16-45)||(2280175-2280204)
chr3 (4-45)||(7351670-7351711)
chr3 (6-43)||(23869001-23869038)
chr3 (1-46)||(27646495-27646540)
chr3 (13-46)||(28300689-28300722)
chr3 (15-44)||(30592336-30592365)
chr3 (5-46)||(34145571-34145612)
chr3 (5-42)||(40419675-40419712)
chr3 (5-42)||(47392461-47392498)
chr3 (17-46)||(47683798-47683827)
chr3 (17-53)||(51032669-51032706)
chr3 (4-40)||(16139327-16139363)
chr3 (10-46)||(23183604-23183640)
chr3 (4-44)||(26550236-26550276)
chr3 (4-44)||(27168714-27168754)
chr3 (4-44)||(28920082-28920122)
chr3 (4-40)||(29222432-29222468)
chr3 (5-45)||(34607953-34607993)
chr3 (17-45)||(36869882-36869910)
chr3 (17-45)||(41448221-41448249)
chr3 (6-42)||(43883314-43883350)
chr3 (13-45)||(46315996-46316028)
chr3 (4-44)||(48405409-48405449)
chr3 (4-44)||(49761218-49761258)
chr3 (17-45)||(49886692-49886720)
chr3 (17-49)||(50025743-50025775)
chr3 (4-40)||(50657099-50657135)
chr3 (6-42)||(53871055-53871091)
[»] chr2 (63 HSPs)
chr2 (1-45)||(13553145-13553189)
chr2 (1-52)||(33559629-33559681)
chr2 (4-43)||(12784431-12784470)
chr2 (5-44)||(34442112-34442151)
chr2 (4-46)||(4319766-4319808)
chr2 (1-43)||(5095982-5096024)
chr2 (4-44)||(9634468-9634508)
chr2 (5-45)||(10288148-10288188)
chr2 (4-44)||(18508077-18508117)
chr2 (1-45)||(36909872-36909916)
chr2 (13-44)||(3299146-3299177)
chr2 (1-44)||(5954512-5954555)
chr2 (1-40)||(8805233-8805272)
chr2 (13-48)||(9834111-9834146)
chr2 (13-44)||(10749720-10749751)
chr2 (4-43)||(21738648-21738687)
chr2 (4-43)||(35334520-35334559)
chr2 (5-44)||(41353530-41353569)
chr2 (5-44)||(43994046-43994085)
chr2 (4-47)||(44484688-44484731)
chr2 (6-44)||(694279-694317)
chr2 (6-44)||(1095859-1095897)
chr2 (17-51)||(3839402-3839436)
chr2 (4-42)||(7502460-7502498)
chr2 (1-43)||(9695090-9695132)
chr2 (10-48)||(14891116-14891154)
chr2 (4-46)||(26290883-26290925)
chr2 (6-44)||(35171260-35171298)
chr2 (5-43)||(36816449-36816487)
chr2 (6-44)||(38724341-38724379)
chr2 (5-43)||(39247496-39247534)
chr2 (5-39)||(41840614-41840648)
chr2 (5-46)||(6365183-6365224)
chr2 (15-44)||(6666019-6666048)
chr2 (15-44)||(7498034-7498063)
chr2 (5-42)||(9202549-9202586)
chr2 (5-46)||(11442669-11442710)
chr2 (6-43)||(12600048-12600085)
chr2 (4-45)||(14499056-14499097)
chr2 (4-45)||(14871638-14871679)
chr2 (17-46)||(22296163-22296192)
chr2 (5-42)||(26321730-26321767)
chr2 (5-42)||(26321898-26321935)
chr2 (17-54)||(35203794-35203831)
chr2 (4-53)||(43791834-43791883)
chr2 (15-43)||(1040514-1040542)
chr2 (4-44)||(4114453-4114493)
chr2 (1-41)||(5962640-5962680)
chr2 (4-44)||(18531600-18531640)
chr2 (8-44)||(20534087-20534123)
chr2 (4-44)||(22966785-22966825)
chr2 (17-53)||(23045083-23045119)
chr2 (4-44)||(24766151-24766191)
chr2 (13-45)||(25086333-25086365)
chr2 (4-44)||(29168724-29168764)
chr2 (4-44)||(34144583-34144623)
chr2 (4-44)||(36517195-36517235)
chr2 (4-40)||(37105644-37105680)
chr2 (4-44)||(38821365-38821405)
chr2 (4-44)||(40371118-40371158)
chr2 (4-52)||(42223975-42224023)
chr2 (4-44)||(44050014-44050054)
chr2 (5-45)||(45420133-45420173)
[»] scaffold0130 (1 HSPs)
scaffold0130 (4-44)||(25702-25742)
[»] scaffold0178 (1 HSPs)
scaffold0178 (4-43)||(9776-9815)
[»] scaffold0330 (1 HSPs)
scaffold0330 (10-44)||(4040-4074)
[»] scaffold0257 (1 HSPs)
scaffold0257 (10-44)||(23980-24014)
[»] scaffold0238 (1 HSPs)
scaffold0238 (5-43)||(16387-16425)
[»] scaffold0009 (1 HSPs)
scaffold0009 (17-47)||(49398-49428)
[»] scaffold1956 (1 HSPs)
scaffold1956 (4-45)||(769-810)
[»] scaffold0148 (2 HSPs)
scaffold0148 (7-44)||(9452-9489)
scaffold0148 (15-43)||(21488-21516)
[»] scaffold0032 (1 HSPs)
scaffold0032 (17-46)||(17433-17462)
[»] scaffold0024 (1 HSPs)
scaffold0024 (15-44)||(60468-60497)
[»] scaffold0003 (1 HSPs)
scaffold0003 (4-45)||(337116-337157)
[»] scaffold0651 (1 HSPs)
scaffold0651 (17-45)||(4891-4919)
[»] scaffold0576 (1 HSPs)
scaffold0576 (17-45)||(9427-9455)
[»] scaffold0504 (1 HSPs)
scaffold0504 (5-45)||(10768-10808)
[»] scaffold0020 (1 HSPs)
scaffold0020 (15-43)||(155906-155934)
[»] scaffold0019 (1 HSPs)
scaffold0019 (17-45)||(72364-72392)
[»] scaffold0014 (1 HSPs)
scaffold0014 (17-45)||(145059-145087)
[»] scaffold0002 (1 HSPs)
scaffold0002 (4-36)||(469670-469702)


Alignment Details
Target: chr6 (Bit Score: 153; Significance: 3e-81; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 65 - 229
Target Start/End: Original strand, 18048928 - 18049092
Alignment:
Q  65 agtaaatatatagaaacaataaaataactacgtgcacaaatgtaataaaagtctatctatatgtcaccttttaaataaaaatttgaggaatggtaaaata 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  18048928 agtaaatatatagaaacaataaaataactacgtgcacaaatgtaataaaagtctatctatatgtcacctgttaaataaaaatttggggaatggtaaaata 18049027  T
Q  165 ttaattattaaaatgaccattttacaataatggtgggtaaaatttgtactttatcacatatattg 229  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18049028 ttaattattaaaatgaccattttaaaataatggtgggtaaaatttgtactttatcacatatattg 18049092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 16368079 - 16368119
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  16368079 caaaaattattataaaatggttgtacaaatatcatttctct 16368119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 28670563 - 28670523
Alignment:
Q  6 aaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  28670563 aaaaatatcataaaatggttgtacaaatatcatttctctaa 28670523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 11635655 - 11635616
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  11635655 aaaaattatcataaaattgttgtacaaatatcatttctct 11635616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 2822259 - 2822221
Alignment:
Q  6 aaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  2822259 aaaattattataaaatggttgtacaaatatcatttctct 2822221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 21857602 - 21857648
Alignment:
Q  7 aaattatcataaaatggttgtacaaatatcatttctc-taagaaaaa 52  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||    
T  21857602 aaattgtcataaaatggttgtacaaatatcatttctcataagaaaaa 21857648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 736853 - 736890
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttct 42  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  736853 aaaaattatcataaaatagttgtacaaatatcatttct 736890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 11785393 - 11785354
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||| ||| ||||||||||||||||||||||||||||    
T  11785393 aaaaattgtcacaaaatggttgtacaaatatcatttctct 11785354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 40
Target Start/End: Complemental strand, 29173028 - 29172993
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcattt 40  Q
    |||| |||||||||||||||||||||||||||||||    
T  29173028 aaaagttatcataaaatggttgtacaaatatcattt 29172993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 16743299 - 16743337
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  16743299 aaaaattattaaaaaatggttgtacaaatatcatttctc 16743337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 27102153 - 27102115
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  27102153 aaaaattattagaaaatggttgtacaaatatcatttctc 27102115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 27143975 - 27143937
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  27143975 aaaaattattagaaaatggttgtacaaatatcatttctc 27143937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 32253817 - 32253779
Alignment:
Q  6 aaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  32253817 aaaattatcaaaaagtggttgtacaaatatcatttctct 32253779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 3401123 - 3401082
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||| ||||| |||||||||||||||||| ||||    
T  3401123 caaaaattatcacaaaatagttgtacaaatatcatttatcta 3401082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7636456 - 7636501
Alignment:
Q  1 gtccaaaaa-ttatcataaaatggttgtacaaatatcatttctcta 45  Q
    ||||||||| |||| |||||||| ||||||||||||||||||||||    
T  7636456 gtccaaaaagttattataaaatgattgtacaaatatcatttctcta 7636501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 44
Target Start/End: Original strand, 16328733 - 16328762
Alignment:
Q  15 ataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||||||||||||||||||||||    
T  16328733 ataaaatggttgtacaaatatcatttctct 16328762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 44
Target Start/End: Original strand, 19789119 - 19789148
Alignment:
Q  15 ataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||||||||||||||||||||||    
T  19789119 ataaaatggttgtacaaatatcatttctct 19789148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 26396508 - 26396549
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||||| |||||||  |||||||||||||||||||||||    
T  26396508 aaaaattattataaaataattgtacaaatatcatttctctaa 26396549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 3339531 - 3339571
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||| || ||| ||||||||||||||||||||||||||||    
T  3339531 caaaagttgtcacaaaatggttgtacaaatatcatttctct 3339571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 7577216 - 7577256
Alignment:
Q  2 tccaaaaattatcataaaatggttgtacaaatatcatttct 42  Q
    |||||||||||| ||||||| | ||||||||||||||||||    
T  7577216 tccaaaaattattataaaatagatgtacaaatatcatttct 7577256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Complemental strand, 15364684 - 15364656
Alignment:
Q  17 aaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||    
T  15364684 aaaatggttgtacaaatatcatttctcta 15364656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 16337955 - 16337995
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||| |||| ||||||||||||||| ||||||||||||||    
T  16337955 caaaagttattataaaatggttgtaccaatatcatttctct 16337995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 21393609 - 21393649
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||| ||||||||||||||| ||| ||||||||||||    
T  21393609 caaaaattctcataaaatggttgttcaactatcatttctct 21393649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 31204842 - 31204882
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||| |||||| |||||||||||| |||||||||||||||    
T  31204842 caaaagttatcaaaaaatggttgtagaaatatcatttctct 31204882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 12074184 - 12074231
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctctaagaaaaa 52  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  12074184 aaaaattgtcataaaatggttgtacaaatatcatttctctaggaaaaa 12074231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 33484137 - 33484180
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||    
T  33484137 gtccaaaaattatcacaaaatggttgtacaaatatcattactct 33484180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 35661630 - 35661669
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  35661630 aaaaattgtcataaaatggttgtacaaatatcatttctct 35661669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 36444428 - 36444467
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  36444428 aaaagttatcataaaatggttgtacaaatatcatttctct 36444467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 40258244 - 40258205
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  40258244 caaaaattatcataaaatggttgtataaatatcatttctc 40258205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 54801519 - 54801566
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctctaagaaaa 51  Q
    |||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  54801519 caaaaattataataaaatgattgtacaaatatcatttctctaaaaaaa 54801566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 35332744 - 35332706
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  35332744 aaaaattatcataaagtggttgtacaaatatcatttctc 35332706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 40721993 - 40722035
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||||||||| ||||||||| |||||||||||||||||||    
T  40721993 gtccaaaaattattataaaatggatgtacaaatatcatttctc 40722035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 50506432 - 50506390
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    |||||||||||| ||||||||||| ||||||||||||||||||    
T  50506432 caaaaattatcaaaaaatggttgttcaaatatcatttctctaa 50506390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 53463102 - 53463144
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    |||||||| | ||||||||||||||||||||||||||||||||    
T  53463102 caaaaattgttataaaatggttgtacaaatatcatttctctaa 53463144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6912679 - 6912638
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcatttct 42  Q
    ||||||||||||| |||||||||||||||||||| |||||||    
T  6912679 gtccaaaaattatgataaaatggttgtacaaataacatttct 6912638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 24088596 - 24088637
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    ||||| || |||||||||||||||||||||||||||||||||    
T  24088596 caaaagttgtcataaaatggttgtacaaatatcatttctcta 24088637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 45548817 - 45548854
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttct 42  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  45548817 aaaaattatcacaaaatggttgtacaaatatcatttct 45548854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 13267508 - 13267552
Alignment:
Q  2 tccaaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||| || ||| ||||||||||||||||||||||||||||||    
T  13267508 tccaaaatttgtcacaaaatggttgtacaaatatcatttctctaa 13267552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 19879812 - 19879776
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcattt 40  Q
    ||||||||||||||||||| |||||||||||||||||    
T  19879812 caaaaattatcataaaatgattgtacaaatatcattt 19879776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 32464638 - 32464674
Alignment:
Q  6 aaaattatcataaaatggttgtacaaatatcatttct 42  Q
    |||||||||||||||| ||||||||||||||||||||    
T  32464638 aaaattatcataaaatagttgtacaaatatcatttct 32464674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 36058443 - 36058395
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctctaagaaaaaa 53  Q
    ||||||||||||||||| |||| ||||||||||||||||| | ||||||    
T  36058443 aaaaattatcataaaatagttgaacaaatatcatttctcttaaaaaaaa 36058395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 47998620 - 47998584
Alignment:
Q  17 aaaatggttgtacaaatatcatttctctaagaaaaaa 53  Q
    |||||||||||||||||||||||||||||| ||||||    
T  47998620 aaaatggttgtacaaatatcatttctctaaaaaaaaa 47998584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 3475908 - 3475869
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||| || |||||||||||||||||||||||||||||||    
T  3475908 caaaagttgtcataaaatggttgtacaaatatcatttctc 3475869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 44
Target Start/End: Complemental strand, 11012171 - 11012140
Alignment:
Q  13 tcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||||||||||||||||||||||||    
T  11012171 tcataaaatggttgtacaaatatcatttctct 11012140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 32901368 - 32901329
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  32901368 caaaaattatcaaaaaatagttgtacaaatatcatttctc 32901329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 33575078 - 33575117
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcattt 40  Q
    |||||||||||||  |||||||||||||||||||||||||    
T  33575078 gtccaaaaattatagtaaaatggttgtacaaatatcattt 33575117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 43168747 - 43168786
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||| ||| ||||||||||||||||||||||||||||    
T  43168747 aaaaattgtcacaaaatggttgtacaaatatcatttctct 43168786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 44170652 - 44170691
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||| | ||||||||||||||||||||||||||||    
T  44170652 aaaaattataacaaaatggttgtacaaatatcatttctct 44170691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8680983 - 8680941
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||||| ||||| | |||||||||||||||||||||||||    
T  8680983 gtccaaaaaatatcacataatggttgtacaaatatcatttctc 8680941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 13139186 - 13139148
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  13139186 aaaaattatcataaaatggatgttcaaatatcatttctc 13139148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 30866391 - 30866353
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    |||| ||||||||||||| ||||||||||||||||||||    
T  30866391 aaaatttatcataaaatgattgtacaaatatcatttctc 30866353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 45521611 - 45521653
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    ||||| || ||||||||||| ||||||||||||||||||||||    
T  45521611 caaaagttgtcataaaatggatgtacaaatatcatttctctaa 45521653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 45
Target Start/End: Original strand, 1987757 - 1987786
Alignment:
Q  16 taaaatggttgtacaaatatcatttctcta 45  Q
    ||||||||||||||||||||||||||||||    
T  1987757 taaaatggttgtacaaatatcatttctcta 1987786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 8810597 - 8810560
Alignment:
Q  17 aaaatggttgtacaaatatcatttctctaagaaaaaat 54  Q
    ||||||||||||||||||||||||||| || |||||||    
T  8810597 aaaatggttgtacaaatatcatttctcaaaaaaaaaat 8810560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 9472546 - 9472587
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||||| | ||||| ||||||||||||||||||||||||    
T  9472546 aaaaattattagaaaatagttgtacaaatatcatttctctaa 9472587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 45
Target Start/End: Original strand, 9828016 - 9828045
Alignment:
Q  16 taaaatggttgtacaaatatcatttctcta 45  Q
    ||||||||||||||||||||||||||||||    
T  9828016 taaaatggttgtacaaatatcatttctcta 9828045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 44
Target Start/End: Complemental strand, 27384215 - 27384186
Alignment:
Q  15 ataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||||||||||||||||||||||    
T  27384215 ataaaatggttgtacaaatatcatttctct 27384186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 29227275 - 29227316
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||| ||| ||||||| |||||||||||||||||    
T  29227275 caaaaattatcaaaaagtggttgttcaaatatcatttctcta 29227316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 46
Target Start/End: Original strand, 29513741 - 29513770
Alignment:
Q  17 aaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||||||||||||||||||||||||||    
T  29513741 aaaatggttgtacaaatatcatttctctaa 29513770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 30973627 - 30973594
Alignment:
Q  13 tcataaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||| ||||||||||||||||||||||||||    
T  30973627 tcataaagtggttgtacaaatatcatttctctaa 30973594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 31147269 - 31147228
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||| | ||||| ||||||||||||||||||||||||||    
T  31147269 aaaaattgtaataaagtggttgtacaaatatcatttctctaa 31147228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 32130268 - 32130305
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttc 41  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  32130268 caaaaattatcaaaaaatggttgttcaaatatcatttc 32130305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 46
Target Start/End: Original strand, 32696834 - 32696863
Alignment:
Q  17 aaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||||||||||||||||||||||||||    
T  32696834 aaaatggttgtacaaatatcatttctctaa 32696863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 36413349 - 36413386
Alignment:
Q  6 aaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  36413349 aaaattatcataaagtggttgtataaatatcatttctc 36413386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 51359822 - 51359863
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    ||||| || ||| |||||||||||||||||||||||||||||    
T  51359822 caaaagttgtcacaaaatggttgtacaaatatcatttctcta 51359863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 52224131 - 52224094
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttct 42  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  52224131 aaaaattatcataaagtggttgtactaatatcatttct 52224094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 53654782 - 53654823
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||| | ||| |||||||||||||||||    
T  53654782 caaaaattatcataaaatagatgttcaaatatcatttctcta 53654823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 56025282 - 56025253
Alignment:
Q  17 aaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||||||||||||||||||||||||||    
T  56025282 aaaatggttgtacaaatatcatttctctaa 56025253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 2999151 - 2999111
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||| ||||||||||| ||| ||||||||||||||||    
T  2999151 caaaaattgtcataaaatggatgttcaaatatcatttctct 2999111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Complemental strand, 4577583 - 4577555
Alignment:
Q  17 aaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||    
T  4577583 aaaatggttgtacaaatatcatttctcta 4577555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Original strand, 10994197 - 10994225
Alignment:
Q  17 aaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||    
T  10994197 aaaatggttgtacaaatatcatttctcta 10994225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 12074511 - 12074475
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcattt 40  Q
    |||||||||||||||||| |||||| |||||||||||    
T  12074511 caaaaattatcataaaatagttgtataaatatcattt 12074475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 12595663 - 12595703
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||||||| ||||||| ||| ||||||||||||||||    
T  12595663 caaaaattatcaaaaaatggatgttcaaatatcatttctct 12595703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20056438 - 20056394
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    ||||||||||||| | | ||| |||||||||||||||||||||||    
T  20056438 gtccaaaaattataacataatagttgtacaaatatcatttctcta 20056394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 26440713 - 26440673
Alignment:
Q  6 aaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    |||||| ||| ||| ||||||||||||||||||||||||||    
T  26440713 aaaattgtcacaaagtggttgtacaaatatcatttctctaa 26440673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 26718417 - 26718377
Alignment:
Q  6 aaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    |||||| ||||||||||| ||| ||||||||||||||||||    
T  26718417 aaaattgtcataaaatggatgttcaaatatcatttctctaa 26718377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 26731045 - 26731005
Alignment:
Q  6 aaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    |||||| ||||||||||| ||| ||||||||||||||||||    
T  26731045 aaaattgtcataaaatggatgttcaaatatcatttctctaa 26731005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Complemental strand, 29863577 - 29863549
Alignment:
Q  17 aaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||    
T  29863577 aaaatggttgtacaaatatcatttctcta 29863549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Complemental strand, 31318779 - 31318751
Alignment:
Q  17 aaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||    
T  31318779 aaaatggttgtacaaatatcatttctcta 31318751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 31559572 - 31559536
Alignment:
Q  9 attatcataaaatggttgtacaaatatcatttctcta 45  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  31559572 attatcaaaaaatgattgtacaaatatcatttctcta 31559536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 31804362 - 31804402
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    ||||||||||| ||| || ||||||||||||||||||||||    
T  31804362 aaaaattatcacaaagtgattgtacaaatatcatttctcta 31804402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 32303317 - 32303353
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcattt 40  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  32303317 caaaaattatcacaaaatagttgtacaaatatcattt 32303353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Complemental strand, 34259841 - 34259813
Alignment:
Q  17 aaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||    
T  34259841 aaaatggttgtacaaatatcatttctcta 34259813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 36728654 - 36728694
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||| ||| |||||||| |||||||||||||||||||    
T  36728654 caaaaattgtcaaaaaatggtcgtacaaatatcatttctct 36728694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 39158144 - 39158104
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||||||| |||||| |||| ||||||||||||||||    
T  39158144 caaaaattatcaaaaaatgattgttcaaatatcatttctct 39158104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 40308479 - 40308439
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    ||||||||| |||||||| ||||||||||||||||| ||||    
T  40308479 aaaaattattataaaatgattgtacaaatatcatttttcta 40308439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Complemental strand, 40755947 - 40755919
Alignment:
Q  17 aaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||    
T  40755947 aaaatggttgtacaaatatcatttctcta 40755919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 41609711 - 41609751
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||| || ||||||||||| ||||||||||||||||||||    
T  41609711 caaaagttgtcataaaatggatgtacaaatatcatttctct 41609751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 44626644 - 44626604
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||| |||||||||||| ||||| ||||||||||||||||    
T  44626644 caaaagttatcataaaatagttgttcaaatatcatttctct 44626604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 47288121 - 47288081
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||| | | ||||||||||||||||||||||||||||    
T  47288121 caaaaattgttacaaaatggttgtacaaatatcatttctct 47288081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 52895266 - 52895230
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcattt 40  Q
    |||||||| |||| |||||||||||||||||||||||    
T  52895266 caaaaattgtcatgaaatggttgtacaaatatcattt 52895230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 44
Target Start/End: Original strand, 54165205 - 54165233
Alignment:
Q  16 taaaatggttgtacaaatatcatttctct 44  Q
    |||||||||||||||||||||||||||||    
T  54165205 taaaatggttgtacaaatatcatttctct 54165233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 43755711 - 43755750
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  43755711 aaaaattatcataaaatggttgtacaaatatcatttctct 43755750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 49699785 - 49699823
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    |||||||||||||||||||||||||||||||||||||||    
T  49699785 aaaaattatcataaaatggttgtacaaatatcatttctc 49699823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 29706735 - 29706775
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  29706735 caaaagttatcataaaatggttgtacaaatatcatttctct 29706775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 23554789 - 23554750
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  23554789 aaaaattatcaaaaaatggttgtacaaatatcatttctct 23554750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 27352672 - 27352629
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||| |||||| ||||||||||||||||||||||||||||    
T  27352672 gtccaaaagttatcacaaaatggttgtacaaatatcatttctct 27352629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 3919342 - 3919300
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||||||||| | |||||||||||||||||||||||||||    
T  3919342 gtccaaaaattataacaaaatggttgtacaaatatcatttctc 3919300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 43457848 - 43457894
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcatttctctaag 47  Q
    |||||||| |||||  |||||||||||||||||||||||||||||||    
T  43457848 gtccaaaagttatcgcaaaatggttgtacaaatatcatttctctaag 43457894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 29489397 - 29489442
Alignment:
Q  10 ttatcataaaatggttgtacaaatatcatttctctaagaaaaaatg 55  Q
    |||||| |||||||||||||||||||||||||||| | ||||||||    
T  29489397 ttatcacaaaatggttgtacaaatatcatttctcttaaaaaaaatg 29489442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 31847223 - 31847256
Alignment:
Q  10 ttatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||||||||||||||||||||||||||||||    
T  31847223 ttatcataaaatggttgtacaaatatcatttctc 31847256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 32873380 - 32873339
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  32873380 caaaagttatcataaaatggatgtacaaatatcatttctcta 32873339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 35848452 - 35848411
Alignment:
Q  3 ccaaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||| | ||||||||||||||||||||||||||||    
T  35848452 ccaaaaattataagaaaatggttgtacaaatatcatttctct 35848411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 39669844 - 39669803
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||| ||| ||||||||||||||||||||||||||||||    
T  39669844 aaaaattgtcacaaaatggttgtacaaatatcatttctctaa 39669803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 51193160 - 51193205
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||||||| | ||||||||| ||||||||||||||||||||||    
T  51193160 gtccaaaaattgttataaaatggatgtacaaatatcatttctctaa 51193205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 11947834 - 11947794
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||| || ||||||||||||||||||||||||||||||||    
T  11947834 caaaagttgtcataaaatggttgtacaaatatcatttctct 11947794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 26101435 - 26101391
Alignment:
Q  2 tccaaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    |||||||||||||| |||||  |||||||||||||||||||||||    
T  26101435 tccaaaaattatcacaaaataattgtacaaatatcatttctctaa 26101391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 26501337 - 26501293
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    |||||||| |||| | |||||||||||||||||||||||||||||    
T  26501337 gtccaaaagttattacaaaatggttgtacaaatatcatttctcta 26501293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 33125355 - 33125395
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||||||||||||||| ||| ||||||||||||||||    
T  33125355 caaaaattatcataaaatggatgttcaaatatcatttctct 33125395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 35026927 - 35026887
Alignment:
Q  7 aaattatcataaaatggttgtacaaatatcatttctctaag 47  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  35026927 aaattatcataaaatgattatacaaatatcatttctctaag 35026887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 47386837 - 47386873
Alignment:
Q  15 ataaaatggttgtacaaatatcatttctctaagaaaa 51  Q
    |||||||||||||||||||||||||||||||| ||||    
T  47386837 ataaaatggttgtacaaatatcatttctctaataaaa 47386873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 30439288 - 30439249
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  30439288 aaaaattgtcataaattggttgtacaaatatcatttctct 30439249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 44
Target Start/End: Original strand, 43612110 - 43612141
Alignment:
Q  13 tcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||||||||||||||||||||||||    
T  43612110 tcataaaatggttgtacaaatatcatttctct 43612141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 48678986 - 48679025
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||| |||||||||| |||||||||||||||||||||    
T  48678986 aaaaattgtcataaaatgattgtacaaatatcatttctct 48679025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 49596273 - 49596234
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||| | ||||||||||||||||||||||||||||||    
T  49596273 aaaaattgtaataaaatggttgtacaaatatcatttctct 49596234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 50062007 - 50062046
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||||||| ||| ||||||||||||||||||||    
T  50062007 aaaaattatcataaagtggatgtacaaatatcatttctct 50062046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 6841827 - 6841789
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  6841827 aaaaattatcataaaatgtttgtacaaatatgatttctc 6841789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 13078983 - 13079017
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatt 39  Q
    ||||||||||||||||||||| |||||||||||||    
T  13078983 aaaaattatcataaaatggttctacaaatatcatt 13079017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 26839421 - 26839383
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttct 42  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  26839421 caaaagttatcataaaatggttgtacaaataccatttct 26839383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 43
Target Start/End: Complemental strand, 31184311 - 31184281
Alignment:
Q  13 tcataaaatggttgtacaaatatcatttctc 43  Q
    |||||||||||||||||||||||||||||||    
T  31184311 tcataaaatggttgtacaaatatcatttctc 31184281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 35335526 - 35335572
Alignment:
Q  6 aaaattatcataaaatggttgtacaaatatcatttctctaagaaaaa 52  Q
    |||||||||| ||| ||||||||||||||| ||||||||||| ||||    
T  35335526 aaaattatcaaaaagtggttgtacaaatatgatttctctaagtaaaa 35335572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 43
Target Start/End: Complemental strand, 40139156 - 40139126
Alignment:
Q  13 tcataaaatggttgtacaaatatcatttctc 43  Q
    |||||||||||||||||||||||||||||||    
T  40139156 tcataaaatggttgtacaaatatcatttctc 40139126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 40605454 - 40605492
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  40605454 aaaaattatcaaaaaaaggttgtacaaatatcatttctc 40605492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 42299219 - 42299257
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  42299219 aaaaattatcacaaaatggttgtacaaatattatttctc 42299257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 48325801 - 48325839
Alignment:
Q  6 aaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||| ||| ||||||||||||||||||||||||||||    
T  48325801 aaaattgtcacaaaatggttgtacaaatatcatttctct 48325839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 49621401 - 49621363
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  49621401 aaaaattattacaaaatggttgtacaaatatcatttctc 49621363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 1689430 - 1689389
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    |||||||| | ||||||| |||||||||||||||||||||||    
T  1689430 caaaaattgttataaaatagttgtacaaatatcatttctcta 1689389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 7371980 - 7372021
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    |||||||| ||||||| | |||||||||||||||||||||||    
T  7371980 caaaaattgtcataaattagttgtacaaatatcatttctcta 7372021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 46
Target Start/End: Original strand, 8577547 - 8577576
Alignment:
Q  17 aaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||||||||||||||||||||||||||    
T  8577547 aaaatggttgtacaaatatcatttctctaa 8577576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 12812228 - 12812179
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctctaagaaaaaa 53  Q
    ||||| ||||||||||| |||||||||||||| ||||||| || ||||||    
T  12812228 caaaagttatcataaaacggttgtacaaatattatttctcaaaaaaaaaa 12812179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 14002775 - 14002815
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||||||| |||| |||||||||||||||||||||||||    
T  14002775 aaaaattatcaaaaaa-ggttgtacaaatatcatttctctaa 14002815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 17167879 - 17167846
Alignment:
Q  13 tcataaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||||||| ||||||||||||||||||||||    
T  17167879 tcataaaatggatgtacaaatatcatttctctaa 17167846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 50
Target Start/End: Original strand, 21433446 - 21433479
Alignment:
Q  17 aaaatggttgtacaaatatcatttctctaagaaa 50  Q
    |||||||||||||||||||||||||||| |||||    
T  21433446 aaaatggttgtacaaatatcatttctcttagaaa 21433479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 23226479 - 23226528
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctctaagaaaaaat 54  Q
    ||||||| ||| ||||||||||||||||||| ||||||| || |||||||    
T  23226479 aaaaattgtcacaaaatggttgtacaaatattatttctcaaacaaaaaat 23226528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 39757218 - 39757181
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttct 42  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  39757218 aaaaattatcataaaatagttgttcaaatatcatttct 39757181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 39762572 - 39762535
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttct 42  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  39762572 aaaaattatcataaaatagttgttcaaatatcatttct 39762535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 46
Target Start/End: Original strand, 48634496 - 48634525
Alignment:
Q  17 aaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||||||||||||||||||||||||||    
T  48634496 aaaatggttgtacaaatatcatttctctaa 48634525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 52283737 - 52283774
Alignment:
Q  9 attatcataaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  52283737 attatcaaaaaatggttgtagaaatatcatttctctaa 52283774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 4213111 - 4213071
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||| |||||| ||||||||||| ||||||||||||||||    
T  4213111 caaaagttatcaaaaaatggttgttcaaatatcatttctct 4213071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Original strand, 12999867 - 12999895
Alignment:
Q  17 aaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||    
T  12999867 aaaatggttgtacaaatatcatttctcta 12999895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Original strand, 18541096 - 18541124
Alignment:
Q  17 aaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||    
T  18541096 aaaatggttgtacaaatatcatttctcta 18541124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 25586593 - 25586553
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||| ||||| |||||||||||||||| |||||    
T  25586593 aaaaattatcatcaaatgattgtacaaatatcattactcta 25586553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 25672380 - 25672344
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcattt 40  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  25672380 caaaaattatcaaaaaattgttgtacaaatatcattt 25672344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Original strand, 25989029 - 25989057
Alignment:
Q  17 aaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||    
T  25989029 aaaatggttgtacaaatatcatttctcta 25989057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 26585205 - 26585245
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||| |||||| ||||| ||||||||||||||||||||||    
T  26585205 caaaagttatcacaaaatagttgtacaaatatcatttctct 26585245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Complemental strand, 34157546 - 34157518
Alignment:
Q  17 aaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||    
T  34157546 aaaatggttgtacaaatatcatttctcta 34157518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 36669402 - 36669442
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||||||| ||| || |||||||||||||||||||||    
T  36669402 caaaaattatcacaaattgattgtacaaatatcatttctct 36669442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Original strand, 41564925 - 41564953
Alignment:
Q  17 aaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||    
T  41564925 aaaatggttgtacaaatatcatttctcta 41564953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 42843376 - 42843416
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||| |||||| ||||| ||||||||||||||||||||||    
T  42843376 caaaagttatcaaaaaattgttgtacaaatatcatttctct 42843416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Original strand, 43641028 - 43641056
Alignment:
Q  17 aaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||    
T  43641028 aaaatggttgtacaaatatcatttctcta 43641056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Complemental strand, 43757625 - 43757597
Alignment:
Q  17 aaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||    
T  43757625 aaaatggttgtacaaatatcatttctcta 43757597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 44161711 - 44161671
Alignment:
Q  6 aaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||||| ||||| |||||||||||||||||| ||||||    
T  44161711 aaaattatcttaaaagggttgtacaaatatcattgctctaa 44161671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 44641936 - 44641976
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    ||||||| | ||||| |||||||||||||||||||||||||    
T  44641936 aaaaattgtaataaagtggttgtacaaatatcatttctcta 44641976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 20852957 - 20852919
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20852957 aaaaattatcataaaatggttgtacaaatatcatttctc 20852919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 6445214 - 6445174
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  6445214 caaaaattatcataaaatggttgtacaaatatcatctctct 6445174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 3950148 - 3950109
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  3950148 aaaaattataataaaatggttgtacaaatatcatttctct 3950109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 4312587 - 4312545
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  4312587 caaaaattatcataaaatagttgttcaaatatcatttctctaa 4312545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 29913602 - 29913564
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  29913602 aaaaattatcataaaatagttgtacaaatatcatttctc 29913564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 33605108 - 33605150
Alignment:
Q  2 tccaaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||| |||||||||||||||||| ||||||||||||||||    
T  33605108 tccaaaagttatcataaaatggttgttcaaatatcatttctct 33605150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 999289 - 999330
Alignment:
Q  3 ccaaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||| | ||||||||||||||||||||||||||||    
T  999289 ccaaaaattataagaaaatggttgtacaaatatcatttctct 999330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 8074757 - 8074798
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||| ||||||| ||||||||||||||||||||||||||    
T  8074757 aaaaattgtcataaagtggttgtacaaatatcatttctctaa 8074798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 40517306 - 40517269
Alignment:
Q  6 aaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    |||||||||||||||||||||||||||||| |||||||    
T  40517306 aaaattatcataaaatggttgtacaaatataatttctc 40517269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 6161978 - 6161946
Alignment:
Q  13 tcataaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||||||    
T  6161978 tcataaaatggttgtacaaatatcatttctcta 6161946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 12655961 - 12655921
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||| |||| ||||||||||||||||||||||||||||||    
T  12655961 caaaagttattataaaatggttgtacaaatatcatttctct 12655921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 22960452 - 22960488
Alignment:
Q  7 aaattatcataaaatggttgtacaaatatcatttctc 43  Q
    |||||||| ||||||||||||||||||||||||||||    
T  22960452 aaattatcctaaaatggttgtacaaatatcatttctc 22960488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 37873138 - 37873178
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  37873138 aaaagttatcataaaatggttttacaaatatcatttctcta 37873178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 2597188 - 2597231
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||||||| | ||||||||||||||||| ||||||||    
T  2597188 gtccaaaaattatcacataatggttgtacaaatattatttctct 2597231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 2768185 - 2768146
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  2768185 aaaagttatcataaaacggttgtacaaatatcatttctct 2768146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 55
Target Start/End: Complemental strand, 9227288 - 9227257
Alignment:
Q  24 ttgtacaaatatcatttctctaagaaaaaatg 55  Q
    ||||||||||||||||||||||||||||||||    
T  9227288 ttgtacaaatatcatttctctaagaaaaaatg 9227257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 9314450 - 9314411
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    |||||||| ||||||||||| |||||||||||||||||||    
T  9314450 caaaaattgtcataaaatggatgtacaaatatcatttctc 9314411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 14531660 - 14531621
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||| |||||||||||| |||||||||||||||||||||    
T  14531660 caaaagttatcataaaatagttgtacaaatatcatttctc 14531621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 40
Target Start/End: Complemental strand, 20052874 - 20052839
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcattt 40  Q
    ||||||||| ||||||||||||||||||||||||||    
T  20052874 aaaaattataataaaatggttgtacaaatatcattt 20052839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 23709002 - 23708967
Alignment:
Q  17 aaaatggttgtacaaatatcatttctctaagaaaaa 52  Q
    ||||||||||||||||||||||||||||| ||||||    
T  23709002 aaaatggttgtacaaatatcatttctctatgaaaaa 23708967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 27630935 - 27630896
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||| ||||||||||| ||||||||||||||||||||    
T  27630935 aaaaattgtcataaaatggatgtacaaatatcatttctct 27630896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 32725813 - 32725852
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||| ||| ||||||||||||||||||||||||    
T  32725813 aaaaattatcacaaagtggttgtacaaatatcatttctct 32725852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 33863281 - 33863320
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  33863281 aaaaattatcagaaaatggttgtacatatatcatttctct 33863320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 39021476 - 39021515
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||| |||||| ||||||||||||||||||||||||||||    
T  39021476 aaaagttatcacaaaatggttgtacaaatatcatttctct 39021515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 44
Target Start/End: Complemental strand, 42689871 - 42689840
Alignment:
Q  13 tcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||||||||||||||||||||||||    
T  42689871 tcataaaatggttgtacaaatatcatttctct 42689840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 5849598 - 5849640
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    ||||| |||||| ||||||||||| ||||||||||||||||||    
T  5849598 caaaagttatcaaaaaatggttgttcaaatatcatttctctaa 5849640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 10344366 - 10344324
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||||||||| ||||||| | |||||||||||||||||||    
T  10344366 gtccaaaaattattataaaatagatgtacaaatatcatttctc 10344324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 14548856 - 14548894
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  14548856 aaaaattattaaaaaatggttgtacaaatatcatttctc 14548894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 20473817 - 20473779
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||| | |||||||||||||||||||||||||||||    
T  20473817 aaaaattgttataaaatggttgtacaaatatcatttctc 20473779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 21649213 - 21649251
Alignment:
Q  17 aaaatggttgtacaaatatcatttctctaagaaaaaatg 55  Q
    ||||||||||||||||||||||||||| || ||||||||    
T  21649213 aaaatggttgtacaaatatcatttctcaaacaaaaaatg 21649251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 30927963 - 30928005
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    |||||||| ||| ||| ||||||||||||||||||||||||||    
T  30927963 caaaaattgtcacaaattggttgtacaaatatcatttctctaa 30928005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 31596987 - 31596945
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    |||||||| ||||||||||| ||| ||||||||||||||||||    
T  31596987 caaaaattgtcataaaatggatgttcaaatatcatttctctaa 31596945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 43873724 - 43873762
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||| ||| |||||||||||||||||||||||||||    
T  43873724 aaaaattgtcacaaaatggttgtacaaatatcatttctc 43873762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 44
Target Start/End: Complemental strand, 35812187 - 35812158
Alignment:
Q  15 ataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||||||||||||||||||||||    
T  35812187 ataaaatggttgtacaaatatcatttctct 35812158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 37343415 - 37343374
Alignment:
Q  2 tccaaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    |||||||||||||| | ||| |||||||||||||||||||||    
T  37343415 tccaaaaattatcacataatagttgtacaaatatcatttctc 37343374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 46
Target Start/End: Original strand, 37784419 - 37784448
Alignment:
Q  17 aaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||||||||||||||||||||||||||    
T  37784419 aaaatggttgtacaaatatcatttctctaa 37784448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 40074895 - 40074858
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttct 42  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  40074895 aaaaattatcataaaatagttgttcaaatatcatttct 40074858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 1332501 - 1332541
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    ||||||| | ||||||||||||||||| |||||||||||||    
T  1332501 aaaaattgttataaaatggttgtacaattatcatttctcta 1332541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 3650151 - 3650111
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    ||||||||| | ||| |||||||||||||||||||||||||    
T  3650151 aaaaattattacaaattggttgtacaaatatcatttctcta 3650111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Original strand, 5742702 - 5742730
Alignment:
Q  17 aaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||    
T  5742702 aaaatggttgtacaaatatcatttctcta 5742730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 11089614 - 11089574
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||  ||||||||||||||||||||||||| ||||    
T  11089614 aaaaattatagtaaaatggttgtacaaatatcatttatcta 11089574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 11584135 - 11584095
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||| | | ||||||||||||||||||||||||||||    
T  11584135 caaaaattgtaagaaaatggttgtacaaatatcatttctct 11584095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 12697745 - 12697781
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcattt 40  Q
    |||||||||||||||||| |||||| |||||||||||    
T  12697745 caaaaattatcataaaatagttgtataaatatcattt 12697781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 16487640 - 16487608
Alignment:
Q  13 tcataaaatggttgtacaaatatcatttctcta 45  Q
    ||||||||||||||| |||||||||||||||||    
T  16487640 tcataaaatggttgttcaaatatcatttctcta 16487608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 28772156 - 28772196
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||| ||| ||||||||||| ||||||||||||||||    
T  28772156 caaaaattgtcaaaaaatggttgttcaaatatcatttctct 28772196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 32020492 - 32020524
Alignment:
Q  10 ttatcataaaatggttgtacaaatatcatttct 42  Q
    |||||| ||||||||||||||||||||||||||    
T  32020492 ttatcaaaaaatggttgtacaaatatcatttct 32020524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Original strand, 34578422 - 34578450
Alignment:
Q  17 aaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||    
T  34578422 aaaatggttgtacaaatatcatttctcta 34578450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 34641584 - 34641544
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||   ||||||||||||||||||||||||||||    
T  34641584 caaaaattatataaaaatggttgtacaaatatcatttctct 34641544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 35345459 - 35345423
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcattt 40  Q
    |||||||||| | ||||||||||||||||||||||||    
T  35345459 caaaaattattacaaaatggttgtacaaatatcattt 35345423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36064072 - 36064028
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    |||||||| || ||| |||||| ||||||||||||||||||||||    
T  36064072 gtccaaaagttgtcacaaaatgattgtacaaatatcatttctcta 36064028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Complemental strand, 38504196 - 38504168
Alignment:
Q  17 aaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||    
T  38504196 aaaatggttgtacaaatatcatttctcta 38504168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Complemental strand, 38675629 - 38675601
Alignment:
Q  17 aaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||    
T  38675629 aaaatggttgtacaaatatcatttctcta 38675601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 45405570 - 45405530
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||||| | |||||||||||||| |||||||||||||    
T  45405570 caaaaattattaaaaaatggttgtacatatatcatttctct 45405530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Original strand, 45405853 - 45405881
Alignment:
Q  17 aaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||    
T  45405853 aaaatggttgtacaaatatcatttctcta 45405881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 6940182 - 6940224
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  6940182 caaaaattattataaaatggttgtacaaatatcatttctctaa 6940224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 7144615 - 7144576
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  7144615 aaaagttatcataaaatggttgtacaaatatcatttctct 7144576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 30420665 - 30420626
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  30420665 caaaaattatcataaaatggatgtacaaatatcatttctc 30420626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 2050969 - 2050924
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||||||| | | ||||||||||||||||||||||||||||||    
T  2050969 gtccaaaaattgttacaaaatggttgtacaaatatcatttctctaa 2050924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 8681884 - 8681843
Alignment:
Q  2 tccaaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    |||||||||||||| |||||| ||||||||||||||||||||    
T  8681884 tccaaaaattatcaaaaaatgattgtacaaatatcatttctc 8681843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 38704229 - 38704270
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||| ||| |||||||||||||||||    
T  38704229 caaaaattatcataaaatggatgttcaaatatcatttctcta 38704270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 372420 - 372456
Alignment:
Q  8 aattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||| ||||||||||||||||||||||||||||||    
T  372420 aattattataaaatggttgtacaaatatcatttctct 372456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 8897412 - 8897380
Alignment:
Q  13 tcataaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||||||    
T  8897412 tcataaaatggttgtacaaatatcatttctcta 8897380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 21012607 - 21012567
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||| ||||||||||||||||||||||| ||||||||    
T  21012607 caaaaattgtcataaaatggttgtacaaatataatttctct 21012567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 35814486 - 35814450
Alignment:
Q  10 ttatcataaaatggttgtacaaatatcatttctctaa 46  Q
    |||||| ||||||||||||||||||||||||||||||    
T  35814486 ttatcacaaaatggttgtacaaatatcatttctctaa 35814450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 4434520 - 4434481
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||| ||| ||||||||||||||||||||||||||||    
T  4434520 aaaaattgtcaaaaaatggttgtacaaatatcatttctct 4434481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 14914414 - 14914371
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||| || ||| ||||||||||||||||||||||||||||    
T  14914414 gtccaaaagttgtcacaaaatggttgtacaaatatcatttctct 14914371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 28501631 - 28501592
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    |||||||| ||| |||||||||||||||||||||||||||    
T  28501631 caaaaattgtcacaaaatggttgtacaaatatcatttctc 28501592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 33901928 - 33901963
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatt 39  Q
    |||||||||||||||||||||||| |||||||||||    
T  33901928 caaaaattatcataaaatggttgttcaaatatcatt 33901963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 34124660 - 34124621
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  34124660 caaaaattatcataaaatggatgttcaaatatcatttctc 34124621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 38500981 - 38500942
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||| ||| ||||||||||||||||||||||||||||    
T  38500981 aaaaattgtcacaaaatggttgtacaaatatcatttctct 38500942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 40829453 - 40829414
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  40829453 caaaaattattaaaaaatggttgtacaaatatcatttctc 40829414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 42825204 - 42825165
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  42825204 aaaaattataataaagtggttgtacaaatatcatttctct 42825165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 189735 - 189777
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    ||||| |||||||||||||| ||| ||||||||||||||||||    
T  189735 caaaagttatcataaaatggatgttcaaatatcatttctctaa 189777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 3154675 - 3154717
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    ||||| |||||||||||| ||||||||||||||||| ||||||    
T  3154675 caaaagttatcataaaatagttgtacaaatatcattactctaa 3154717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 12878789 - 12878755
Alignment:
Q  10 ttatcataaaatggttgtacaaatatcatttctct 44  Q
    |||| ||||||||||||||||||||||||||||||    
T  12878789 ttataataaaatggttgtacaaatatcatttctct 12878755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 17097834 - 17097876
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    ||||| |||||| ||||||||||| ||||||||||||||||||    
T  17097834 caaaagttatcaaaaaatggttgttcaaatatcatttctctaa 17097876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 19980480 - 19980438
Alignment:
Q  3 ccaaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    ||||||||||||||||||| |||||| |||||| |||||||||    
T  19980480 ccaaaaattatcataaaatagttgtataaatatgatttctcta 19980438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 35098770 - 35098804
Alignment:
Q  10 ttatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||| ||||||||||||||||||||||||||||    
T  35098770 ttatcaaaaaatggttgtacaaatatcatttctct 35098804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 36581498 - 36581536
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  36581498 aaaaattatcacaaagtggttgtacaaatatcatttctc 36581536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 18695344 - 18695315
Alignment:
Q  17 aaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||||||||||||||||||||||||||    
T  18695344 aaaatggttgtacaaatatcatttctctaa 18695315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 25345379 - 25345338
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||| |  ||||||||||||||||||||||    
T  25345379 caaaaattatcataaattaattgtacaaatatcatttctcta 25345338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 46
Target Start/End: Original strand, 25585501 - 25585530
Alignment:
Q  17 aaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||||||||||||||||||||||||||    
T  25585501 aaaatggttgtacaaatatcatttctctaa 25585530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 27005511 - 27005552
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||| |||||  ||||||||||||||||||||||    
T  27005511 caaaaattatcaaaaaataattgtacaaatatcatttctcta 27005552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 27340907 - 27340866
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||||| ||||| || |||||||||||||||||||||||    
T  27340907 aaaaattataataaagtgattgtacaaatatcatttctctaa 27340866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 30334789 - 30334826
Alignment:
Q  6 aaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  30334789 aaaattgtcataaagtggttgtacaaatatcatttctc 30334826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 34400656 - 34400619
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttct 42  Q
    ||||||| |||||||||| |||||||||||||||||||    
T  34400656 aaaaattgtcataaaatgattgtacaaatatcatttct 34400619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 38075719 - 38075756
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttct 42  Q
    ||||||||||||||||| |||||||||||||| |||||    
T  38075719 aaaaattatcataaaatagttgtacaaatatcttttct 38075756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 41383387 - 41383428
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    |||| |||||| ||||||||||||||||||||| ||||||||    
T  41383387 aaaagttatcacaaaatggttgtacaaatatcagttctctaa 41383428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 8787189 - 8787229
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||  |||| |||||||||||||||||||||||    
T  8787189 aaaaattatcactaaattgttgtacaaatatcatttctcta 8787229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Complemental strand, 19271885 - 19271857
Alignment:
Q  17 aaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||    
T  19271885 aaaatggttgtacaaatatcatttctcta 19271857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 19481214 - 19481254
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||| |||||||||||||| ||| ||||||||||||||||    
T  19481214 caaaagttatcataaaatggatgttcaaatatcatttctct 19481254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 19844341 - 19844381
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||| |||||| ||||| ||||||||||||||||||||||    
T  19844341 caaaagttatcaaaaaatagttgtacaaatatcatttctct 19844381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 20985561 - 20985601
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||   ||||||||||||||||||||||||||||    
T  20985561 caaaaattatacaaaaatggttgtacaaatatcatttctct 20985601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 27271083 - 27271123
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||| ||||||| ||||| ||||||||||||||||||    
T  27271083 caaaaattgtcataaattggttttacaaatatcatttctct 27271123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 44
Target Start/End: Complemental strand, 29765857 - 29765829
Alignment:
Q  16 taaaatggttgtacaaatatcatttctct 44  Q
    |||||||||||||||||||||||||||||    
T  29765857 taaaatggttgtacaaatatcatttctct 29765829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 43
Target Start/End: Complemental strand, 31708398 - 31708370
Alignment:
Q  15 ataaaatggttgtacaaatatcatttctc 43  Q
    |||||||||||||||||||||||||||||    
T  31708398 ataaaatggttgtacaaatatcatttctc 31708370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 32912077 - 32912037
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||||||||||||||  ||| ||||||||||||||||    
T  32912077 caaaaattatcataaaatgaatgttcaaatatcatttctct 32912037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 46
Target Start/End: Complemental strand, 38730888 - 38730860
Alignment:
Q  18 aaatggttgtacaaatatcatttctctaa 46  Q
    |||||||||||||||||||||||||||||    
T  38730888 aaatggttgtacaaatatcatttctctaa 38730860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 4353 - 4312
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  4353 aaaagttatcataaaatggttgtacaaatatcatttctctaa 4312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000006; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 5068655 - 5068695
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  5068655 caaaagttatcataaaatggttgtacaaatatcatttctct 5068695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 43079661 - 43079705
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||    
T  43079661 gtccaaaaattatcacaaagtggttgtacaaatatcatttctcta 43079705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 26904731 - 26904765
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatat 35  Q
    |||||||||||||||||||||||||||||||||||    
T  26904731 gtccaaaaattatcataaaatggttgtacaaatat 26904765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 10014984 - 10015025
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcatttct 42  Q
    ||||||| ||||||||||||| ||||||||||||||||||||    
T  10014984 gtccaaatattatcataaaatagttgtacaaatatcatttct 10015025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 22692114 - 22692081
Alignment:
Q  13 tcataaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||||||||||||||||||||||||||||||    
T  22692114 tcataaaatggttgtacaaatatcatttctctaa 22692081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 46880941 - 46880900
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||| ||||||||||| |||||||||||||||||    
T  46880941 caaaaattatcaaaaaatggttgttcaaatatcatttctcta 46880900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 42467242 - 42467202
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    ||||||||| | |||||||||||||||||||||||||||||    
T  42467242 aaaaattattaaaaaatggttgtacaaatatcatttctcta 42467202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 44894506 - 44894546
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  44894506 aaaagttatcataaaatggatgtacaaatatcatttctcta 44894546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 7990117 - 7990078
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||||||||| | ||||||||||||||||||||    
T  7990117 aaaaattatcataaaatagatgtacaaatatcatttctct 7990078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 16567354 - 16567315
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||| |||| ||||||||||||||||||||||||||||||    
T  16567354 aaaagttataataaaatggttgtacaaatatcatttctct 16567315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 16598308 - 16598347
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||| |||| ||||||||||||||||||||||||||||||    
T  16598308 aaaagttataataaaatggttgtacaaatatcatttctct 16598347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 29763869 - 29763830
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||| |||||| |||||||||||||||||||||||||||    
T  29763869 caaaagttatcacaaaatggttgtacaaatatcatttctc 29763830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 34690956 - 34690991
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatt 39  Q
    |||||||||||||||||| |||||||||||||||||    
T  34690956 caaaaattatcataaaatagttgtacaaatatcatt 34690991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 44
Target Start/End: Original strand, 34992365 - 34992396
Alignment:
Q  13 tcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||||||||||||||||||||||||    
T  34992365 tcataaaatggttgtacaaatatcatttctct 34992396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 38023457 - 38023496
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||| ||| ||||||||||||||||||||||||    
T  38023457 aaaaattatcacaaagtggttgtacaaatatcatttctct 38023496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 8904439 - 8904481
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    |||||||||||| |||| |||||| ||||||||||||||||||    
T  8904439 caaaaattatcacaaaacggttgttcaaatatcatttctctaa 8904481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 18227894 - 18227944
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctctaagaaaaaatg 55  Q
    ||||||||||||||||| ||||||||| |||||||||| |||  |||||||    
T  18227894 aaaaattatcataaaatagttgtacaactatcatttctataactaaaaatg 18227944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 23329940 - 23329902
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  23329940 aaaaattataataaaatggttgtacaaatgtcatttctc 23329902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 28081815 - 28081853
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  28081815 aaaaattattacaaaatggttgtacaaatatcatttctc 28081853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 30818029 - 30818067
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttct 42  Q
    ||||| || ||||||||||||||||||||||||||||||    
T  30818029 caaaagttgtcataaaatggttgtacaaatatcatttct 30818067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 43025846 - 43025808
Alignment:
Q  6 aaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  43025846 aaaattatcaaaaagtggttgtacaaatatcatttctct 43025808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 6110010 - 6110051
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    |||||||| ||| ||||||||||||||| |||||||||||||    
T  6110010 caaaaattgtcacaaaatggttgtacaattatcatttctcta 6110051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 6353762 - 6353725
Alignment:
Q  6 aaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  6353762 aaaattgtcaaaaaatggttgtacaaatatcatttctc 6353725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 7295491 - 7295450
Alignment:
Q  2 tccaaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    |||||||||| |  ||||||||||||||||||||||||||||    
T  7295491 tccaaaaattgtactaaaatggttgtacaaatatcatttctc 7295450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 45
Target Start/End: Complemental strand, 11070255 - 11070226
Alignment:
Q  16 taaaatggttgtacaaatatcatttctcta 45  Q
    ||||||||||||||||||||||||||||||    
T  11070255 taaaatggttgtacaaatatcatttctcta 11070226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 18111644 - 18111685
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||| |||||||||||||| || |||||||||||||    
T  18111644 caaaaattattataaaatggttgtagaagtatcatttctcta 18111685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 46
Target Start/End: Original strand, 24380755 - 24380784
Alignment:
Q  17 aaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||||||||||||||||||||||||||    
T  24380755 aaaatggttgtacaaatatcatttctctaa 24380784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 44
Target Start/End: Complemental strand, 31398152 - 31398123
Alignment:
Q  15 ataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||||||||||||||||||||||    
T  31398152 ataaaatggttgtacaaatatcatttctct 31398123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 34304711 - 34304760
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctctaagaaaaaat 54  Q
    ||||||| ||| ||||| |||||||||||||||||| ||||| |||||||    
T  34304711 aaaaattgtcaaaaaatagttgtacaaatatcatttttctaaaaaaaaat 34304760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 35491457 - 35491490
Alignment:
Q  18 aaatggttgtacaaatatcatttctctaagaaaa 51  Q
    |||||||| |||||||||||||||||||||||||    
T  35491457 aaatggttatacaaatatcatttctctaagaaaa 35491490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 44
Target Start/End: Original strand, 41590563 - 41590592
Alignment:
Q  15 ataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||||||||||||||||||||||    
T  41590563 ataaaatggttgtacaaatatcatttctct 41590592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 42
Target Start/End: Original strand, 43171214 - 43171243
Alignment:
Q  13 tcataaaatggttgtacaaatatcatttct 42  Q
    ||||||||||||||||||||||||||||||    
T  43171214 tcataaaatggttgtacaaatatcatttct 43171243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 48383351 - 48383388
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttct 42  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  48383351 aaaaattgtaataaaatggttgtacaaatatcatttct 48383388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 48522182 - 48522145
Alignment:
Q  17 aaaatggttgtacaaatatcatttctctaagaaaaaat 54  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  48522182 aaaatggttgtacaaatatcatttctcttagaacaaat 48522145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 6269405 - 6269369
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcattt 40  Q
    |||||||| | ||||||||||||||||||||||||||    
T  6269405 caaaaattgttataaaatggttgtacaaatatcattt 6269369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 11604714 - 11604750
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcattt 40  Q
    ||||||||||||||||||  |||||||||||||||||    
T  11604714 caaaaattatcataaaatttttgtacaaatatcattt 11604750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 12141938 - 12141898
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||| |||||| ||||||||||||||||||| ||||||||    
T  12141938 caaaagttatcacaaaatggttgtacaaatatgatttctct 12141898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 19113955 - 19113919
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcattt 40  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  19113955 caaaaattatcatcaaatggttctacaaatatcattt 19113919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Complemental strand, 19426606 - 19426578
Alignment:
Q  17 aaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||    
T  19426606 aaaatggttgtacaaatatcatttctcta 19426578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 35586805 - 35586845
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||| |||||||||||||| ||| ||||||||||||||||    
T  35586805 caaaagttatcataaaatggatgttcaaatatcatttctct 35586845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 37325851 - 37325899
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctctaagaaaaa 52  Q
    ||||| || ||| ||| |||||||||||||||||||||| |||||||||    
T  37325851 caaaagttgtcacaaattggttgtacaaatatcatttctttaagaaaaa 37325899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 37352149 - 37352109
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||| ||| ||||||||||| ||||||||||||||||    
T  37352149 caaaaattgtcaaaaaatggttgttcaaatatcatttctct 37352109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 38259102 - 38259066
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcattt 40  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  38259102 caaaagttatcaaaaaatggttgtacaaatatcattt 38259066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 46260136 - 46260172
Alignment:
Q  16 taaaatggttgtacaaatatcatttctctaagaaaaa 52  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  46260136 taaaatggttgtataaatatcatttctctaaaaaaaa 46260172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 46651710 - 46651662
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctctaagaaaaaa 53  Q
    ||||||| ||||||| | |||||||| ||||||||||||||| ||||||    
T  46651710 aaaaattgtcataaagtagttgtacatatatcatttctctaaaaaaaaa 46651662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 46829518 - 46829478
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||| | | ||||||||||||||||||||||||||||    
T  46829518 caaaaattgttacaaaatggttgtacaaatatcatttctct 46829478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 47012602 - 47012642
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||||| | |||||| |||||||||||||||||||||    
T  47012602 caaaaattattagaaaatgattgtacaaatatcatttctct 47012642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 47530323 - 47530363
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||| || |||||||||||||||| |||||||||||||||    
T  47530323 caaaagttgtcataaaatggttgtataaatatcatttctct 47530363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Original strand, 49142551 - 49142579
Alignment:
Q  17 aaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||    
T  49142551 aaaatggttgtacaaatatcatttctcta 49142579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000006; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 349445 - 349485
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  349445 caaaaattattataaaatggttgtacaaatatcatttctct 349485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 50652429 - 50652385
Alignment:
Q  2 tccaaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||| || ||||||||||||||||||||||||||||||||||    
T  50652429 tccaaaagttgtcataaaatggttgtacaaatatcatttctctaa 50652385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 21239110 - 21239149
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  21239110 caaaaattatcataaaatagttgtacaaatatcatttctc 21239149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 40
Target Start/End: Original strand, 22836228 - 22836263
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcattt 40  Q
    ||||||||||||||||||||||||||||||||||||    
T  22836228 aaaaattatcataaaatggttgtacaaatatcattt 22836263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 35756022 - 35755983
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  35756022 aaaaattatcataaaatggttgttcaaatatcatttctct 35755983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 43409392 - 43409435
Alignment:
Q  2 tccaaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||| ||| |||||||||||||||||||||||||    
T  43409392 tccaaaaattatcacaaagtggttgtacaaatatcatttctcta 43409435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 43499590 - 43499633
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  43499590 gtccaaaagttatcataaagtggttgtacaaatatcatttctct 43499633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 47849710 - 47849671
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  47849710 aaaaattatcacaaaatggttgtacaaatatcatttctct 47849671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 51230640 - 51230679
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  51230640 caaaaattatcataaaatggttgtacaaatatcttttctc 51230679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 53932420 - 53932463
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    
T  53932420 gtccaaaaattgtcacaaaatggttgtacaaatatcatttctct 53932463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 24095438 - 24095480
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    |||||||||||||||||||| ||| ||||||||||||||||||    
T  24095438 caaaaattatcataaaatggatgttcaaatatcatttctctaa 24095480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 28300324 - 28300286
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  28300324 aaaaattataataaaatggttgtacaaatatcatttctc 28300286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 39901632 - 39901590
Alignment:
Q  2 tccaaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  39901632 tccaaaaattatcaaaaaatgattgtacaaatatcatttctct 39901590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 52727481 - 52727530
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctctaagaaaaaat 54  Q
    ||||||||||||||| || ||||||||||||||||||||| | |||||||    
T  52727481 aaaaattatcataaagtgattgtacaaatatcatttctcttaaaaaaaat 52727530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 20549417 - 20549457
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||||||||||||| | ||||||||||||||||||||    
T  20549417 caaaaattatcataaaatagatgtacaaatatcatttctct 20549457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 53133985 - 53134025
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    ||||||||| ||||||||||| |||||||||||||||||||    
T  53133985 aaaaattattataaaatggttttacaaatatcatttctcta 53134025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 35376584 - 35376623
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||| ||| ||||||||||||||||||||||||||||    
T  35376584 aaaaattgtcacaaaatggttgtacaaatatcatttctct 35376623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 46
Target Start/End: Complemental strand, 48287699 - 48287668
Alignment:
Q  15 ataaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||||||||||||||||||||||||||||    
T  48287699 ataaaatggttgtacaaatatcatttctctaa 48287668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 52100300 - 52100261
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  52100300 caaaaattattaaaaaatggttgtacaaatatcatttctc 52100261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1295374 - 1295332
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    |||||||| |||||| ||||| |||||||||||||||||||||    
T  1295374 gtccaaaagttatcacaaaatagttgtacaaatatcatttctc 1295332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 46
Target Start/End: Original strand, 10347517 - 10347547
Alignment:
Q  16 taaaatggttgtacaaatatcatttctctaa 46  Q
    |||||||||||||||||||||||||||||||    
T  10347517 taaaatggttgtacaaatatcatttctctaa 10347547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 10811174 - 10811132
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    ||||| || ||||||||||||||| ||||||||||||||||||    
T  10811174 caaaagttgtcataaaatggttgttcaaatatcatttctctaa 10811132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 43
Target Start/End: Original strand, 19418198 - 19418228
Alignment:
Q  13 tcataaaatggttgtacaaatatcatttctc 43  Q
    |||||||||||||||||||||||||||||||    
T  19418198 tcataaaatggttgtacaaatatcatttctc 19418228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 20893275 - 20893313
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  20893275 aaaaattatcacaaaatggttgtacaaatattatttctc 20893313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 29525272 - 29525222
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctctaagaaaaaat 54  Q
    ||||| || ||||||||||  ||||||||||||||||||| ||||||||||    
T  29525272 caaaagttgtcataaaatgaatgtacaaatatcatttctcaaagaaaaaat 29525222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 31176473 - 31176511
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  31176473 aaaaattatcacaaagtggttgtacaaatatcatttctc 31176511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 37134639 - 37134677
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||| ||||||||| |||||||||||||||||||||    
T  37134639 aaaaattgtcataaaatagttgtacaaatatcatttctc 37134677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 37754489 - 37754447
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||||||||| ||||||| | |||||||||||||||||||    
T  37754489 gtccaaaaattattataaaatagatgtacaaatatcatttctc 37754447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 41349011 - 41349045
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatt 39  Q
    ||||||||||| |||||||||||||||||||||||    
T  41349011 aaaaattatcacaaaatggttgtacaaatatcatt 41349045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 44910736 - 44910694
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    ||||| |||||||||||||  ||||||||||||||||||||||    
T  44910736 caaaagttatcataaaatgaatgtacaaatatcatttctctaa 44910694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 46952982 - 46952948
Alignment:
Q  10 ttatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||| ||||||||||||||||||||||||||||    
T  46952982 ttatcaaaaaatggttgtacaaatatcatttctct 46952948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 52564668 - 52564706
Alignment:
Q  6 aaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||| ||| ||||||||||||||||||||||||||||    
T  52564668 aaaattgtcacaaaatggttgtacaaatatcatttctct 52564706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 55344334 - 55344368
Alignment:
Q  10 ttatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||| ||||||||||||||||||||||||||||    
T  55344334 ttatcacaaaatggttgtacaaatatcatttctct 55344368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 55466996 - 55466958
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||| | |||||||||||||||||||||||||||||    
T  55466996 aaaaattcttataaaatggttgtacaaatatcatttctc 55466958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 45
Target Start/End: Complemental strand, 2280204 - 2280175
Alignment:
Q  16 taaaatggttgtacaaatatcatttctcta 45  Q
    ||||||||||||||||||||||||||||||    
T  2280204 taaaatggttgtacaaatatcatttctcta 2280175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 7351670 - 7351711
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    ||||||||||   |||||||||||||||||||||||||||||    
T  7351670 caaaaattatacaaaaatggttgtacaaatatcatttctcta 7351711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 23869001 - 23869038
Alignment:
Q  6 aaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    |||||| | |||||||||||||||||||||||||||||    
T  23869001 aaaattgttataaaatggttgtacaaatatcatttctc 23869038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 27646540 - 27646495
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    |||||||||||||   |||||| |||||||||||||||||||||||    
T  27646540 gtccaaaaattattgcaaaatgattgtacaaatatcatttctctaa 27646495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 28300689 - 28300722
Alignment:
Q  13 tcataaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||| ||||||||||||||||||||||||||    
T  28300689 tcataaagtggttgtacaaatatcatttctctaa 28300722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 44
Target Start/End: Complemental strand, 30592365 - 30592336
Alignment:
Q  15 ataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||||||||||||||||||||||    
T  30592365 ataaaatggttgtacaaatatcatttctct 30592336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 34145571 - 34145612
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    |||||||||  |||||| ||||||||||||||||||||||||    
T  34145571 aaaaattatactaaaatagttgtacaaatatcatttctctaa 34145612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 40419675 - 40419712
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttct 42  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  40419675 aaaaattatcacaaaatgattgtacaaatatcatttct 40419712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 47392461 - 47392498
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttct 42  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  47392461 aaaaattatcataaaatagttgttcaaatatcatttct 47392498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 47683827 - 47683798
Alignment:
Q  17 aaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||||||||||||||||||||||||||    
T  47683827 aaaatggttgtacaaatatcatttctctaa 47683798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 51032669 - 51032706
Alignment:
Q  17 aaaatggttgtacaaatatcatttctcta-agaaaaaa 53  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  51032669 aaaatggttgtacaaatatcatttctctatagaaaaaa 51032706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 16139327 - 16139363
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcattt 40  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  16139327 caaaagttatcataaaatggttgtacaaatattattt 16139363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 23183640 - 23183604
Alignment:
Q  10 ttatcataaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  23183640 ttatcattaaatggatgtacaaatatcatttctctaa 23183604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 26550276 - 26550236
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||||| | ||||||||||| ||||||||||||||||    
T  26550276 caaaaattattaaaaaatggttgtgcaaatatcatttctct 26550236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 27168714 - 27168754
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||||| | ||||||||||| ||||||||||||||||    
T  27168714 caaaaattattaaaaaatggttgttcaaatatcatttctct 27168754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 28920082 - 28920122
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||||| || |||| ||||||||||||||||||||||    
T  28920082 caaaaattattatcaaatagttgtacaaatatcatttctct 28920122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 29222432 - 29222468
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcattt 40  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  29222432 caaaaattatcataaaatgattgtataaatatcattt 29222468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 34607953 - 34607993
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    ||||||| ||| ||| |||||||||||||||||||||||||    
T  34607953 aaaaattgtcacaaagtggttgtacaaatatcatttctcta 34607993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Original strand, 36869882 - 36869910
Alignment:
Q  17 aaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||    
T  36869882 aaaatggttgtacaaatatcatttctcta 36869910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Original strand, 41448221 - 41448249
Alignment:
Q  17 aaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||    
T  41448221 aaaatggttgtacaaatatcatttctcta 41448249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 43883350 - 43883314
Alignment:
Q  6 aaaattatcataaaatggttgtacaaatatcatttct 42  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  43883350 aaaattgtcaaaaaatggttgtacaaatatcatttct 43883314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 46315996 - 46316028
Alignment:
Q  13 tcataaaatggttgtacaaatatcatttctcta 45  Q
    ||||||| |||||||||||||||||||||||||    
T  46315996 tcataaagtggttgtacaaatatcatttctcta 46316028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 48405449 - 48405409
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||| || ||| ||||||||||||||||||||||||||||    
T  48405449 caaaagttgtcacaaaatggttgtacaaatatcatttctct 48405409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 49761218 - 49761258
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||| | | ||||||||||||||||||||||||||||    
T  49761218 caaaaattgttagaaaatggttgtacaaatatcatttctct 49761258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Complemental strand, 49886720 - 49886692
Alignment:
Q  17 aaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||    
T  49886720 aaaatggttgtacaaatatcatttctcta 49886692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 50025743 - 50025775
Alignment:
Q  17 aaaatggttgtacaaatatcatttctctaagaa 49  Q
    |||||||||||||||||||||||||||| ||||    
T  50025743 aaaatggttgtacaaatatcatttctcttagaa 50025775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 50657135 - 50657099
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcattt 40  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  50657135 caaaaattatcataaaattgttgtacaagtatcattt 50657099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 53871055 - 53871091
Alignment:
Q  6 aaaattatcataaaatggttgtacaaatatcatttct 42  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  53871055 aaaattgtcataaaatggttgttcaaatatcatttct 53871091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000006; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13553189 - 13553145
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||    
T  13553189 gtccaaaaattatcacaaagtggttgtacaaatatcatttctcta 13553145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 33559681 - 33559629
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcatttctc-taagaaaaa 52  Q
    |||||||||||||  |||||||||||||||||||||||||||| |||||||||    
T  33559681 gtccaaaaattatactaaaatggttgtacaaatatcatttctcataagaaaaa 33559629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 12784431 - 12784470
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  12784431 caaaaattattataaaatggttgtacaaatatcatttctc 12784470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 34442151 - 34442112
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  34442151 aaaaattatcataaagtggttgtacaaatatcatttctct 34442112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 4319808 - 4319766
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    |||||||||| ||||||| ||||||||||||||||||||||||    
T  4319808 caaaaattattataaaatagttgtacaaatatcatttctctaa 4319766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5095982 - 5096024
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  5095982 gtccaaaaattatcacaaaatgattgtacaaatatcatttctc 5096024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 9634468 - 9634508
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||||||||||||||| ||| ||||||||||||||||    
T  9634468 caaaaattatcataaaatggatgttcaaatatcatttctct 9634508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 10288188 - 10288148
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  10288188 aaaaattatcacaaaatagttgtacaaatatcatttctcta 10288148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 18508117 - 18508077
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  18508117 caaaagttatcataaaatggatgtacaaatatcatttctct 18508077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 36909872 - 36909916
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    |||||||| || ||| |||||||||||||||||||||||||||||    
T  36909872 gtccaaaagttgtcacaaaatggttgtacaaatatcatttctcta 36909916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 44
Target Start/End: Original strand, 3299146 - 3299177
Alignment:
Q  13 tcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||||||||||||||||||||||||    
T  3299146 tcataaaatggttgtacaaatatcatttctct 3299177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 5954512 - 5954555
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||| |||||| | ||||||||||||||||||||||||||    
T  5954512 gtccaaaagttatcacataatggttgtacaaatatcatttctct 5954555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 8805272 - 8805233
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcattt 40  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  8805272 gtccaaaaattatcataaaatagttgtacatatatcattt 8805233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 48
Target Start/End: Original strand, 9834111 - 9834146
Alignment:
Q  13 tcataaaatggttgtacaaatatcatttctctaaga 48  Q
    |||||||||||||||| |||||||||||||||||||    
T  9834111 tcataaaatggttgtataaatatcatttctctaaga 9834146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 44
Target Start/End: Original strand, 10749720 - 10749751
Alignment:
Q  13 tcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||||||||||||||||||||||||    
T  10749720 tcataaaatggttgtacaaatatcatttctct 10749751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 21738648 - 21738687
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  21738648 caaaaattattagaaaatggttgtacaaatatcatttctc 21738687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 35334559 - 35334520
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||| |||| |||||||||||||||||||||||||||||    
T  35334559 caaaagttattataaaatggttgtacaaatatcatttctc 35334520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 41353530 - 41353569
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||||||| || |||||||||||||||||||||    
T  41353530 aaaaattatcataaattgattgtacaaatatcatttctct 41353569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 43994046 - 43994085
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||| ||||||||||||||||||| ||||||||||||    
T  43994046 aaaaattgtcataaaatggttgtacaactatcatttctct 43994085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 44484688 - 44484731
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctctaag 47  Q
    |||||||| | | |||||||||||||||||||||||||||||||    
T  44484688 caaaaattgttacaaaatggttgtacaaatatcatttctctaag 44484731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 694317 - 694279
Alignment:
Q  6 aaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||| ||| ||||||||||||||||||||||||||||    
T  694317 aaaattgtcaaaaaatggttgtacaaatatcatttctct 694279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 1095859 - 1095897
Alignment:
Q  6 aaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  1095859 aaaattgtcataaaatggatgtacaaatatcatttctct 1095897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Complemental strand, 3839436 - 3839402
Alignment:
Q  17 aaaatggttgtacaaatatcatttctctaagaaaa 51  Q
    |||||||||||||||||||||||||||||| ||||    
T  3839436 aaaatggttgtacaaatatcatttctctaacaaaa 3839402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 7502460 - 7502498
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttct 42  Q
    |||||||| ||| ||||||||||||||||||||||||||    
T  7502460 caaaaattgtcaaaaaatggttgtacaaatatcatttct 7502498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9695090 - 9695132
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||||||||||  | |||||||||||||||||||||||||    
T  9695090 gtccaaaaattatctcataatggttgtacaaatatcatttctc 9695132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 48
Target Start/End: Original strand, 14891116 - 14891154
Alignment:
Q  10 ttatcataaaatggttgtacaaatatcatttctctaaga 48  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  14891116 ttatcacaaaatagttgtacaaatatcatttctctaaga 14891154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 26290883 - 26290925
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    |||||||||| | ||||||||||||||||||| ||||||||||    
T  26290883 caaaaattattaaaaaatggttgtacaaatataatttctctaa 26290925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 35171260 - 35171298
Alignment:
Q  6 aaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||| ||| ||||||||||||||||||||||||||||    
T  35171260 aaaattgtcacaaaatggttgtacaaatatcatttctct 35171298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 36816449 - 36816487
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  36816449 aaaaattatcataaaatagttgtataaatatcatttctc 36816487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 38724341 - 38724379
Alignment:
Q  6 aaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  38724341 aaaattatactaaaatggttgtacaaatatcatttctct 38724379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 39247496 - 39247534
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    |||| |||||| |||||||||||||||||||||||||||    
T  39247496 aaaagttatcacaaaatggttgtacaaatatcatttctc 39247534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 41840614 - 41840648
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatt 39  Q
    |||||||||||||||||||||||| ||||||||||    
T  41840614 aaaaattatcataaaatggttgtataaatatcatt 41840648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 6365224 - 6365183
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||| ||| ||| ||||||||||||||||||||||||||    
T  6365224 aaaaattgtcacaaagtggttgtacaaatatcatttctctaa 6365183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 44
Target Start/End: Complemental strand, 6666048 - 6666019
Alignment:
Q  15 ataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||||||||||||||||||||||    
T  6666048 ataaaatggttgtacaaatatcatttctct 6666019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 44
Target Start/End: Original strand, 7498034 - 7498063
Alignment:
Q  15 ataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||||||||||||||||||||||    
T  7498034 ataaaatggttgtacaaatatcatttctct 7498063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 9202549 - 9202586
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttct 42  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  9202549 aaaaattgtcataaaatggttgtagaaatatcatttct 9202586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 11442710 - 11442669
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||| | || |||||||||||||||||||||||||||||    
T  11442710 aaaaattgtaatgaaatggttgtacaaatatcatttctctaa 11442669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 12600085 - 12600048
Alignment:
Q  6 aaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  12600085 aaaattatcacaaagtggttgtacaaatatcatttctc 12600048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 14499056 - 14499097
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    |||||||| | ||||||||||||||||||||||| |||||||    
T  14499056 caaaaattgttataaaatggttgtacaaatatcaattctcta 14499097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 14871679 - 14871638
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    |||||||| | | |||||||||||||||||||||||||||||    
T  14871679 caaaaattgtaagaaaatggttgtacaaatatcatttctcta 14871638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 46
Target Start/End: Original strand, 22296163 - 22296192
Alignment:
Q  17 aaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||||||||||||||||||||||||||    
T  22296163 aaaatggttgtacaaatatcatttctctaa 22296192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 26321730 - 26321767
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttct 42  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  26321730 aaaagttatcacaaaatggttgtacaaatatcatttct 26321767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 26321898 - 26321935
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttct 42  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  26321898 aaaagttatcacaaaatggttgtacaaatatcatttct 26321935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 35203794 - 35203831
Alignment:
Q  17 aaaatggttgtacaaatatcatttctctaagaaaaaat 54  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  35203794 aaaatggttgtacaaatatcatttctcaaagtaaaaat 35203831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 43791834 - 43791883
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctctaagaaaaaa 53  Q
    ||||| || ||||||||||| |||||||||||||||| ||||| ||||||    
T  43791834 caaaagttgtcataaaatggatgtacaaatatcatttatctaaaaaaaaa 43791883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 43
Target Start/End: Complemental strand, 1040542 - 1040514
Alignment:
Q  15 ataaaatggttgtacaaatatcatttctc 43  Q
    |||||||||||||||||||||||||||||    
T  1040542 ataaaatggttgtacaaatatcatttctc 1040514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 4114453 - 4114493
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||| |||| ||||||||||||||||||||| ||||||||    
T  4114453 caaaagttataataaaatggttgtacaaatataatttctct 4114493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 5962680 - 5962640
Alignment:
Q  1 gtccaaaaattatcataaaatggttgtacaaatatcatttc 41  Q
    ||||||||||||||| | |||| ||||||||||||||||||    
T  5962680 gtccaaaaattatcacataatgattgtacaaatatcatttc 5962640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 18531640 - 18531600
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||| ||| ||||| ||||||||||||||||||||||    
T  18531640 caaaaattgtcaaaaaatagttgtacaaatatcatttctct 18531600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 20534087 - 20534123
Alignment:
Q  8 aattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  20534087 aattatcacaaaatggttgtgcaaatatcatttctct 20534123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 22966825 - 22966785
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||| |||||| ||| ||||||||||||||||||||||||    
T  22966825 caaaagttatcaaaaagtggttgtacaaatatcatttctct 22966785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 23045119 - 23045083
Alignment:
Q  17 aaaatggttgtacaaatatcatttctctaagaaaaaa 53  Q
    ||||| |||||||||||||||||||||||| ||||||    
T  23045119 aaaatagttgtacaaatatcatttctctaaaaaaaaa 23045083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 24766191 - 24766151
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||| |||| | ||||||||||||||||||||||||||||    
T  24766191 caaaagttattaaaaaatggttgtacaaatatcatttctct 24766151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 25086365 - 25086333
Alignment:
Q  13 tcataaaatggttgtacaaatatcatttctcta 45  Q
    ||||||||| |||||||||||||||||||||||    
T  25086365 tcataaaattgttgtacaaatatcatttctcta 25086333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 29168764 - 29168724
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||| || ||| ||||||||||||||||||||||||||||    
T  29168764 caaaagttgtcaaaaaatggttgtacaaatatcatttctct 29168724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 34144583 - 34144623
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||| ||| ||| ||||||||||||||||||||||||    
T  34144583 caaaaattgtcacaaattggttgtacaaatatcatttctct 34144623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 36517235 - 36517195
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||||||||||||| | ||| ||||||||||||||||    
T  36517235 caaaaattatcataaaatagatgttcaaatatcatttctct 36517195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 37105680 - 37105644
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcattt 40  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  37105680 caaaaattatcataaaatggatgttcaaatatcattt 37105644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 38821405 - 38821365
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||| || ||||||||||||||| ||||||||||||||||    
T  38821405 caaaagttgtcataaaatggttgttcaaatatcatttctct 38821365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 40371158 - 40371118
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||||||||||||| | |||||||||| |||||||||    
T  40371158 caaaaattatcataaaatagatgtacaaataacatttctct 40371118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 42223975 - 42224023
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctctaagaaaaa 52  Q
    ||||||||||||  |||||| ||| |||||||||||||||||| |||||    
T  42223975 caaaaattatcactaaatggatgttcaaatatcatttctctaaaaaaaa 42224023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 44050054 - 44050014
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||| || ||||||||||||||||||| ||||||||||||    
T  44050054 caaaagttgtcataaaatggttgtacaagtatcatttctct 44050014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 45420173 - 45420133
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    ||||||||| | |||||||||||||||||||| ||||||||    
T  45420173 aaaaattattaaaaaatggttgtacaaatatcgtttctcta 45420133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 25742 - 25702
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||| ||||||| ||||||||||||||||||||||||    
T  25742 caaaaattgtcataaagtggttgtacaaatatcatttctct 25702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 9815 - 9776
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  9815 caaaaattataaaaaaatggttgtacaaatatcatttctc 9776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 4074 - 4040
Alignment:
Q  10 ttatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||| ||||||||||||||||||||||||||||    
T  4074 ttatcacaaaatggttgtacaaatatcatttctct 4040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 24014 - 23980
Alignment:
Q  10 ttatcataaaatggttgtacaaatatcatttctct 44  Q
    |||||||||||||||||| ||||||||||||||||    
T  24014 ttatcataaaatggttgttcaaatatcatttctct 23980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 16425 - 16387
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctc 43  Q
    ||||||||| ||||| |||||||||||||||||||||||    
T  16425 aaaaattataataaagtggttgtacaaatatcatttctc 16387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 47
Target Start/End: Original strand, 49398 - 49428
Alignment:
Q  17 aaaatggttgtacaaatatcatttctctaag 47  Q
    |||||||||||||||||||||||||||||||    
T  49398 aaaatggttgtacaaatatcatttctctaag 49428  T

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Target: scaffold1956 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1956
Description:

Target: scaffold1956; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 810 - 769
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||| ||||||| ||| |||||||||||||||||    
T  810 caaaaattatcaaaaaatggatgttcaaatatcatttctcta 769  T

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Target: scaffold0148 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 9489 - 9452
Alignment:
Q  7 aaattatcataaaatggttgtacaaatatcatttctct 44  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  9489 aaattgtcataaagtggttgtacaaatatcatttctct 9452  T

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Target: scaffold0148; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 43
Target Start/End: Original strand, 21488 - 21516
Alignment:
Q  15 ataaaatggttgtacaaatatcatttctc 43  Q
    |||||||||||||||||||||||||||||    
T  21488 ataaaatggttgtacaaatatcatttctc 21516  T

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Target: scaffold0032 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 17462 - 17433
Alignment:
Q  17 aaaatggttgtacaaatatcatttctctaa 46  Q
    ||||||||||||||||||||||||||||||    
T  17462 aaaatggttgtacaaatatcatttctctaa 17433  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 44
Target Start/End: Complemental strand, 60497 - 60468
Alignment:
Q  15 ataaaatggttgtacaaatatcatttctct 44  Q
    ||||||||||||||||||||||||||||||    
T  60497 ataaaatggttgtacaaatatcatttctct 60468  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 337157 - 337116
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    ||||| || ||| |||||||||||||||||||||||||||||    
T  337157 caaaagttgtcagaaaatggttgtacaaatatcatttctcta 337116  T

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Target: scaffold0651 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Original strand, 4891 - 4919
Alignment:
Q  17 aaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||    
T  4891 aaaatggttgtacaaatatcatttctcta 4919  T

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Target: scaffold0576 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Complemental strand, 9455 - 9427
Alignment:
Q  17 aaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||    
T  9455 aaaatggttgtacaaatatcatttctcta 9427  T

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Target: scaffold0504 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 10768 - 10808
Alignment:
Q  5 aaaaattatcataaaatggttgtacaaatatcatttctcta 45  Q
    ||||||| | ||||| |||||||||||||||||||||||||    
T  10768 aaaaattgtaataaagtggttgtacaaatatcatttctcta 10808  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 43
Target Start/End: Complemental strand, 155934 - 155906
Alignment:
Q  15 ataaaatggttgtacaaatatcatttctc 43  Q
    |||||||||||||||||||||||||||||    
T  155934 ataaaatggttgtacaaatatcatttctc 155906  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Complemental strand, 72392 - 72364
Alignment:
Q  17 aaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||    
T  72392 aaaatggttgtacaaatatcatttctcta 72364  T

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Target: scaffold0014 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Complemental strand, 145087 - 145059
Alignment:
Q  17 aaaatggttgtacaaatatcatttctcta 45  Q
    |||||||||||||||||||||||||||||    
T  145087 aaaatggttgtacaaatatcatttctcta 145059  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 469670 - 469702
Alignment:
Q  4 caaaaattatcataaaatggttgtacaaatatc 36  Q
    |||||||||||| ||||||||||||||||||||    
T  469670 caaaaattatcaaaaaatggttgtacaaatatc 469702  T

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