View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8509_high_16 (Length: 333)
Name: NF8509_high_16
Description: NF8509
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8509_high_16 |
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Alignment Details
Target: chr7 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 4 - 281
Target Start/End: Complemental strand, 6351385 - 6351108
Alignment:
| Q |
4 |
gcagatagttgagagttgagactggtcgaacattacctgctctttgaatatacaatttaaaaatattatcatttgagaagaattaaaaatttagatcaca |
103 |
Q |
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| T |
6351385 |
gcagatagttgagagttgagactggtcgaacattacttgctctttgaatatacaatttaaaaatattatcatttgagaagaattaaaaatttagatcaca |
6351286 |
T |
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| Q |
104 |
ttcagctctgaaaaaacataacaaaaatatagttacagagagagactaaataccaacacttatctttatgctcacctgccttgcttcttgtattccgggg |
203 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
6351285 |
ttcagctctgaaaaaacataacaaaaatatagttacagagagagactaaataccaacacttatctttatgctcacctgccttgcttcttgtatgccgggg |
6351186 |
T |
|
| Q |
204 |
ttcttgctttcgatactgctgcctttctaataaatagattagttatccccgttcttgctggcctggttatcttgattt |
281 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
6351185 |
ttcttgctttcgatactgctgcctttctaataaatagattagttatcccctttcttgctggcctggttatcttgattt |
6351108 |
T |
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