View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8509_high_21 (Length: 274)
Name: NF8509_high_21
Description: NF8509
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8509_high_21 |
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Alignment Details
Target: chr5 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 2176391 - 2176646
Alignment:
| Q |
1 |
aattgatagtttcaaaattatgaataaacatacaaacaaattaaagggtaaaattaaaaattagttagatgttgaaaatacaaattatcagtcannnnnn |
100 |
Q |
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| T |
2176391 |
aattgatagtttcaaaattatgaataaacatacaaacaaattaaagggtaaaattaaaaattagttagatgttgaaaagacaaattatcagtcatttttt |
2176490 |
T |
|
| Q |
101 |
natgttgctaaaactactttcatattgaaattgataagatatcaaattagcatttctctgttcttgcaaaatgtgtagacaatatatacaatagtgtagt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2176491 |
tatgttgctaaaactactttcatattgaaattgataagatatcaaattagcatttctctgttcttgcaaaatgtgtagacaatatatacaatagtgtagt |
2176590 |
T |
|
| Q |
201 |
ccaagtacttttggaactccc-aagactcacacagaaacacactaacactgcatac |
255 |
Q |
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|||||||||||||| |||||| |||||||||| ||||||||||||||||| |||| |
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| T |
2176591 |
ccaagtacttttgggactcccaaagactcacaaggaaacacactaacactggatac |
2176646 |
T |
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