View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8509_high_27 (Length: 241)
Name: NF8509_high_27
Description: NF8509
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8509_high_27 |
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Alignment Details
Target: chr7 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 46973494 - 46973272
Alignment:
| Q |
1 |
catcatttccaattttttaaaattattacaagtgagtattgtgtctcatagaattaaaacggcaatattgagacgcatttagcataataaagtgagggat |
100 |
Q |
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| T |
46973494 |
catcatttctaattttttaaaattattacaagtgagtattgtgtctcatagaattaaaacggcaatattgagacgcatttagcataataaagtgagggat |
46973395 |
T |
|
| Q |
101 |
aatagaatgaaacctgttaggaggagcacagggagtacgaatccaggtgtaaacctaaccatgatgtaagtataatcgctatttcatatgaaaaactaga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46973394 |
aatagaatgaaacctgttaggaggagcacagggagtacgaatccaggtgtaaacctaaccatgatgtaagtataatcgctatttcatatgaaaaactaga |
46973295 |
T |
|
| Q |
201 |
atcggtagctacattgtagtgtg |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
46973294 |
atcggtagctacattgtagtgtg |
46973272 |
T |
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