View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8509_low_40 (Length: 225)

Name: NF8509_low_40
Description: NF8509
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8509_low_40
NF8509_low_40
[»] chr1 (40 HSPs)
chr1 (38-172)||(32988476-32988610)
chr1 (38-172)||(48219769-48219903)
chr1 (38-172)||(25531778-25531912)
chr1 (38-172)||(39354391-39354525)
chr1 (38-172)||(50539260-50539394)
chr1 (41-172)||(48264941-48265072)
chr1 (38-172)||(50876364-50876498)
chr1 (38-171)||(49805379-49805512)
chr1 (38-177)||(52378984-52379123)
chr1 (38-172)||(38458729-38458864)
chr1 (38-172)||(30529177-30529311)
chr1 (38-167)||(45234972-45235101)
chr1 (38-172)||(32565746-32565880)
chr1 (38-177)||(37281087-37281226)
chr1 (38-172)||(3529176-3529310)
chr1 (38-172)||(16265033-16265167)
chr1 (41-172)||(23569804-23569935)
chr1 (38-172)||(24982351-24982485)
chr1 (38-157)||(1849714-1849834)
chr1 (38-153)||(16266181-16266296)
chr1 (38-153)||(26441656-26441771)
chr1 (39-155)||(29161859-29161976)
chr1 (84-157)||(42708519-42708592)
chr1 (38-150)||(16751580-16751692)
chr1 (38-150)||(38738105-38738217)
chr1 (38-172)||(3898698-3898832)
chr1 (87-153)||(47222233-47222299)
chr1 (38-155)||(31971514-31971631)
chr1 (38-172)||(43680069-43680204)
chr1 (82-172)||(50481278-50481368)
chr1 (86-155)||(48376175-48376244)
chr1 (38-150)||(23330474-23330586)
chr1 (87-173)||(4604997-4605083)
chr1 (38-143)||(14075764-14075868)
chr1 (41-141)||(38737508-38737608)
chr1 (82-144)||(31698759-31698821)
chr1 (38-131)||(41501734-41501828)
chr1 (108-169)||(23391260-23391321)
chr1 (137-172)||(45234849-45234884)
chr1 (38-70)||(27580978-27581010)
[»] chr4 (57 HSPs)
chr4 (38-175)||(5744210-5744347)
chr4 (38-177)||(46212477-46212616)
chr4 (38-172)||(3901266-3901400)
chr4 (38-172)||(5735271-5735405)
chr4 (38-172)||(6494588-6494722)
chr4 (38-172)||(28166274-28166408)
chr4 (38-172)||(45198467-45198601)
chr4 (38-178)||(3442471-3442611)
chr4 (38-172)||(46803631-46803766)
chr4 (38-172)||(4264134-4264268)
chr4 (38-172)||(26205831-26205965)
chr4 (38-172)||(47579287-47579420)
chr4 (38-170)||(28151993-28152125)
chr4 (38-170)||(49768447-49768579)
chr4 (38-173)||(21859046-21859181)
chr4 (38-173)||(21914909-21915044)
chr4 (38-167)||(37688160-37688289)
chr4 (38-172)||(7738946-7739080)
chr4 (38-172)||(39786484-39786617)
chr4 (38-173)||(18360100-18360235)
chr4 (38-173)||(36602693-36602828)
chr4 (41-172)||(55190844-55190975)
chr4 (38-155)||(1377049-1377166)
chr4 (38-172)||(23255935-23256069)
chr4 (42-167)||(20678719-20678843)
chr4 (41-172)||(5123287-5123418)
chr4 (38-172)||(4209363-4209496)
chr4 (38-152)||(53568374-53568488)
chr4 (38-175)||(3443514-3443651)
chr4 (38-153)||(25644378-25644493)
chr4 (38-172)||(6923067-6923201)
chr4 (38-143)||(39193941-39194046)
chr4 (42-150)||(50033042-50033150)
chr4 (42-150)||(50035561-50035669)
chr4 (38-153)||(19525841-19525956)
chr4 (38-150)||(19731293-19731404)
chr4 (38-144)||(42187106-42187212)
chr4 (41-150)||(19631330-19631439)
chr4 (38-172)||(26659840-26659973)
chr4 (38-172)||(39260259-39260391)
chr4 (84-172)||(19634021-19634109)
chr4 (38-172)||(19170666-19170800)
chr4 (38-140)||(55997146-55997248)
chr4 (38-147)||(55014287-55014396)
chr4 (84-172)||(19652428-19652516)
chr4 (105-172)||(39195675-39195742)
chr4 (38-141)||(50971491-50971593)
chr4 (47-143)||(10181017-10181113)
chr4 (89-144)||(23603825-23603880)
chr4 (38-121)||(27976697-27976780)
chr4 (113-150)||(14958030-14958067)
chr4 (47-144)||(51736822-51736919)
chr4 (88-147)||(51737130-51737189)
chr4 (40-73)||(29424775-29424808)
chr4 (37-73)||(30867371-30867407)
chr4 (106-150)||(31486308-31486352)
chr4 (105-141)||(35064025-35064061)
[»] chr5 (41 HSPs)
chr5 (38-172)||(29627268-29627402)
chr5 (38-174)||(40512807-40512943)
chr5 (38-172)||(38697963-38698097)
chr5 (38-172)||(42148307-42148441)
chr5 (38-173)||(35448124-35448259)
chr5 (38-171)||(5364421-5364554)
chr5 (38-172)||(39894781-39894915)
chr5 (38-172)||(32334765-32334901)
chr5 (38-172)||(32002141-32002275)
chr5 (38-172)||(4924965-4925099)
chr5 (38-172)||(5213049-5213183)
chr5 (38-172)||(35290286-35290420)
chr5 (38-172)||(39036410-39036544)
chr5 (84-172)||(23988579-23988667)
chr5 (38-172)||(37516144-37516279)
chr5 (38-178)||(37843702-37843842)
chr5 (38-172)||(970138-970272)
chr5 (38-155)||(43517187-43517304)
chr5 (84-172)||(41411331-41411419)
chr5 (38-153)||(22613836-22613951)
chr5 (38-153)||(43067248-43067363)
chr5 (82-172)||(4300003-4300093)
chr5 (84-165)||(14475407-14475488)
chr5 (84-172)||(1830654-1830742)
chr5 (41-178)||(30779876-30780012)
chr5 (84-172)||(40316121-40316209)
chr5 (38-174)||(19889652-19889787)
chr5 (82-152)||(16048103-16048173)
chr5 (38-172)||(39405764-39405898)
chr5 (38-143)||(21961256-21961361)
chr5 (38-150)||(25563522-25563634)
chr5 (84-150)||(42421707-42421773)
chr5 (38-139)||(24520242-24520342)
chr5 (82-144)||(15268138-15268200)
chr5 (38-144)||(19868813-19868918)
chr5 (113-172)||(16954690-16954749)
chr5 (82-153)||(32300589-32300660)
chr5 (82-150)||(19087941-19088009)
chr5 (137-172)||(5212922-5212957)
chr5 (38-73)||(37272814-37272849)
chr5 (127-172)||(37304361-37304406)
[»] chr2 (41 HSPs)
chr2 (38-172)||(18718239-18718373)
chr2 (38-175)||(27559572-27559709)
chr2 (38-172)||(23671376-23671510)
chr2 (38-177)||(42038518-42038657)
chr2 (38-172)||(34826912-34827046)
chr2 (38-173)||(3987359-3987494)
chr2 (38-169)||(14707661-14707792)
chr2 (38-178)||(20517413-20517552)
chr2 (38-172)||(14372077-14372211)
chr2 (38-172)||(41172884-41173018)
chr2 (38-175)||(16941938-16942075)
chr2 (38-175)||(17012603-17012740)
chr2 (38-178)||(44330378-44330518)
chr2 (38-172)||(4045360-4045494)
chr2 (38-172)||(40425376-40425510)
chr2 (38-174)||(7443018-7443154)
chr2 (38-172)||(30708728-30708862)
chr2 (38-172)||(44283406-44283540)
chr2 (38-157)||(36199078-36199197)
chr2 (47-178)||(41463653-41463784)
chr2 (38-172)||(9877210-9877344)
chr2 (38-172)||(32776027-32776161)
chr2 (94-165)||(38588072-38588143)
chr2 (38-172)||(40598128-40598263)
chr2 (38-172)||(38963519-38963653)
chr2 (38-122)||(30776320-30776404)
chr2 (87-150)||(4083229-4083292)
chr2 (38-144)||(4045878-4045984)
chr2 (171-211)||(8794010-8794050)
chr2 (38-150)||(39418147-39418259)
chr2 (88-150)||(38137707-38137769)
chr2 (84-150)||(40898662-40898728)
chr2 (38-172)||(332278-332411)
chr2 (38-150)||(42951362-42951474)
chr2 (84-155)||(24283131-24283202)
chr2 (82-121)||(43925252-43925291)
chr2 (105-155)||(5030465-5030515)
chr2 (82-178)||(25786556-25786653)
chr2 (84-150)||(13399278-13399344)
chr2 (41-73)||(8924640-8924672)
chr2 (137-173)||(40425248-40425284)
[»] chr7 (36 HSPs)
chr7 (38-172)||(36819696-36819830)
chr7 (38-174)||(42086765-42086901)
chr7 (38-172)||(19072769-19072903)
chr7 (38-172)||(32619069-32619203)
chr7 (38-172)||(2400285-2400419)
chr7 (38-172)||(28185535-28185669)
chr7 (38-172)||(37951072-37951206)
chr7 (38-172)||(47080980-47081114)
chr7 (38-173)||(47713629-47713764)
chr7 (38-172)||(36859335-36859469)
chr7 (38-172)||(36905526-36905660)
chr7 (40-172)||(23474098-23474230)
chr7 (38-172)||(31466485-31466619)
chr7 (38-172)||(4612214-4612348)
chr7 (38-171)||(31110625-31110756)
chr7 (38-172)||(42834419-42834553)
chr7 (38-172)||(44479848-44479981)
chr7 (38-173)||(21392017-21392152)
chr7 (38-144)||(48531350-48531456)
chr7 (38-172)||(10464242-10464376)
chr7 (106-173)||(47713774-47713841)
chr7 (38-172)||(34478138-34478272)
chr7 (38-172)||(35500874-35501008)
chr7 (38-155)||(47537940-47538057)
chr7 (38-172)||(37231690-37231825)
chr7 (38-138)||(39982241-39982341)
chr7 (38-153)||(36643181-36643296)
chr7 (38-147)||(31497831-31497939)
chr7 (41-150)||(4033313-4033422)
chr7 (38-150)||(38198503-38198615)
chr7 (82-153)||(42493801-42493872)
chr7 (82-172)||(2450689-2450779)
chr7 (107-150)||(33613238-33613281)
chr7 (82-144)||(40348438-40348500)
chr7 (137-178)||(34478002-34478043)
chr7 (105-149)||(3680530-3680574)
[»] chr3 (45 HSPs)
chr3 (38-172)||(18659052-18659186)
chr3 (38-177)||(7459947-7460086)
chr3 (38-172)||(54840255-54840389)
chr3 (38-172)||(8559132-8559266)
chr3 (38-172)||(37832900-37833034)
chr3 (38-172)||(43137851-43137985)
chr3 (38-172)||(21906996-21907130)
chr3 (38-169)||(10571271-10571402)
chr3 (38-157)||(45167314-45167433)
chr3 (38-172)||(1327311-1327446)
chr3 (38-178)||(38492046-38492185)
chr3 (38-165)||(38833671-38833797)
chr3 (42-163)||(51062399-51062520)
chr3 (42-174)||(52668617-52668748)
chr3 (38-172)||(29728225-29728359)
chr3 (49-167)||(51392430-51392548)
chr3 (38-172)||(25097314-25097448)
chr3 (38-172)||(48706971-48707104)
chr3 (38-172)||(27848952-27849085)
chr3 (38-172)||(46483551-46483684)
chr3 (85-172)||(34827322-34827409)
chr3 (38-172)||(17052864-17052998)
chr3 (42-172)||(53066375-53066504)
chr3 (39-172)||(49057856-49057989)
chr3 (38-148)||(32285303-32285413)
chr3 (38-172)||(32951263-32951397)
chr3 (39-172)||(28690516-28690649)
chr3 (38-167)||(47638060-47638189)
chr3 (38-150)||(10437304-10437416)
chr3 (84-172)||(15503025-15503113)
chr3 (38-153)||(4238747-4238862)
chr3 (38-173)||(7671440-7671575)
chr3 (38-153)||(10435153-10435268)
chr3 (38-144)||(35717982-35718088)
chr3 (38-172)||(3547548-3547681)
chr3 (38-150)||(9145524-9145636)
chr3 (85-144)||(45093748-45093807)
chr3 (38-150)||(36665041-36665152)
chr3 (47-172)||(39435171-39435296)
chr3 (38-73)||(3817850-3817885)
chr3 (87-153)||(48143784-48143849)
chr3 (82-143)||(9794346-9794407)
chr3 (137-173)||(7459819-7459855)
chr3 (137-173)||(34827479-34827515)
chr3 (38-70)||(52550744-52550776)
[»] scaffold0092 (1 HSPs)
scaffold0092 (38-174)||(44235-44371)
[»] chr6 (18 HSPs)
chr6 (38-173)||(643558-643693)
chr6 (38-172)||(31854818-31854952)
chr6 (38-178)||(22020270-22020410)
chr6 (38-172)||(11114565-11114699)
chr6 (38-172)||(24150741-24150875)
chr6 (38-147)||(29986285-29986394)
chr6 (38-153)||(7098000-7098115)
chr6 (38-178)||(25435406-25435545)
chr6 (38-178)||(29403638-29403778)
chr6 (38-174)||(18991902-18992037)
chr6 (38-172)||(20662186-20662321)
chr6 (38-173)||(33121541-33121676)
chr6 (38-172)||(8796050-8796183)
chr6 (38-175)||(30237162-30237301)
chr6 (38-150)||(13207080-13207192)
chr6 (38-153)||(25163183-25163298)
chr6 (82-172)||(16434699-16434789)
chr6 (137-175)||(29979021-29979059)
[»] chr8 (35 HSPs)
chr8 (38-172)||(29790942-29791076)
chr8 (38-172)||(38739657-38739791)
chr8 (38-172)||(40013651-40013785)
chr8 (39-172)||(37709899-37710032)
chr8 (38-177)||(2805603-2805742)
chr8 (38-172)||(30289924-30290058)
chr8 (38-172)||(45081812-45081946)
chr8 (38-172)||(1580892-1581026)
chr8 (38-176)||(43066123-43066260)
chr8 (38-172)||(3293228-3293363)
chr8 (38-172)||(6470845-6470979)
chr8 (38-172)||(13138259-13138393)
chr8 (38-172)||(30380530-30380664)
chr8 (82-172)||(38845200-38845290)
chr8 (38-170)||(23248779-23248911)
chr8 (38-172)||(8351007-8351141)
chr8 (84-172)||(2986339-2986426)
chr8 (38-175)||(39361125-39361259)
chr8 (38-144)||(12893559-12893665)
chr8 (41-172)||(14522380-14522511)
chr8 (42-150)||(44123695-44123803)
chr8 (38-153)||(31127932-31128047)
chr8 (41-150)||(9302483-9302592)
chr8 (38-153)||(18809295-18809410)
chr8 (38-172)||(45253749-45253883)
chr8 (84-150)||(886240-886306)
chr8 (84-153)||(25256353-25256422)
chr8 (87-174)||(14847208-14847295)
chr8 (82-172)||(11854524-11854614)
chr8 (42-150)||(10658000-10658107)
chr8 (38-73)||(38845706-38845741)
chr8 (84-173)||(23764624-23764714)
chr8 (38-143)||(25173796-25173902)
chr8 (137-173)||(30290150-30290186)
chr8 (82-150)||(42785920-42785988)
[»] scaffold0459 (1 HSPs)
scaffold0459 (38-172)||(12752-12886)
[»] scaffold0366 (2 HSPs)
scaffold0366 (38-172)||(10393-10527)
scaffold0366 (38-172)||(14059-14193)
[»] scaffold0051 (1 HSPs)
scaffold0051 (41-172)||(41347-41478)
[»] scaffold0027 (1 HSPs)
scaffold0027 (38-172)||(117321-117455)
[»] scaffold0007 (1 HSPs)
scaffold0007 (38-172)||(15343-15477)
[»] scaffold0294 (1 HSPs)
scaffold0294 (48-131)||(12583-12666)
[»] scaffold0111 (1 HSPs)
scaffold0111 (38-144)||(38487-38593)
[»] scaffold0340 (1 HSPs)
scaffold0340 (87-173)||(14344-14430)


Alignment Details
Target: chr1 (Bit Score: 103; Significance: 2e-51; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 32988476 - 32988610
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  32988476 ctcgatgagtatttttaaaatattaaatttttataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 32988575  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||||||||||||||||||||||||||    
T  32988576 tcaactaggtcatttatttagagacggagggagta 32988610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 48219769 - 48219903
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  48219769 ctcgatgagtatttttaaaatattaaatttttataattatttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 48219868  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||||| |||||||||||||    
T  48219869 tcaactaggtcatttatttagggacggagggagta 48219903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 25531912 - 25531778
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  25531912 ctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 25531813  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||||| |||||||||||||    
T  25531812 tcaactaggtcatttatttagggacggagggagta 25531778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 39354391 - 39354525
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  39354391 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 39354490  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||||| |||| ||||||||    
T  39354491 tcaactaggtcatttatttagggacgtagggagta 39354525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 50539394 - 50539260
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  50539394 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 50539295  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||| |||||||||||| |||||||||||||    
T  50539294 tcaactagatcatttatttagggacggagggagta 50539260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 41 - 172
Target Start/End: Original strand, 48264941 - 48265072
Alignment:
Q  41 gatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtca 140  Q
    |||||||||||||||||||||||||||||||||        | ||||||||||||||||| || |||||||||||||||||| |||||||||||||||||    
T  48264941 gatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatattaaagataaaacatatgcattggtatgtgtgtcagagtca 48265040  T
Q  141 actaggtcatttatttagagacggagggagta 172  Q
    |||||||||||||||||| |||||||||||||    
T  48265041 actaggtcatttatttagggacggagggagta 48265072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 50876498 - 50876364
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||| ||||| ||||    
T  50876498 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatatgtgttagag 50876399  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||||| |||||||||||||    
T  50876398 tcaactaggtcatttatttagggacggagggagta 50876364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 38 - 171
Target Start/End: Original strand, 49805379 - 49805512
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        |||| ||||||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  49805379 ctcgatgagtatttttaaaatattaaatttttataattttttttaataaagaattgaagatatcaaagataaaacatatgcattggtatgtttgtcagag 49805478  T
Q  138 tcaactaggtcatttatttagagacggagggagt 171  Q
    |||||||| |||||||||||| ||||||||||||    
T  49805479 tcaactagatcatttatttagggacggagggagt 49805512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 38 - 177
Target Start/End: Complemental strand, 52379123 - 52378984
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||| ||||||||||||||||||||||| |||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  52379123 ctcgataagtatttttaaaatattaaatttatataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 52379024  T
Q  138 tcaactaggtcatttatttagagacggagggagtactatt 177  Q
    |||||||| |||||||||||| ||||||||||||| ||||    
T  52379023 tcaactagatcatttatttagggacggagggagtagtatt 52378984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 38458864 - 38458729
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaa-tagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcaga 136  Q
    ||||||||||||||||||||||||||||||||||||         | |||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  38458864 ctcgatgagtatttttaaaatattaaatttttataatttttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcaga 38458765  T
Q  137 gtcaactaggtcatttatttagagacggagggagta 172  Q
     |||||||||||||||||| || |||||||| ||||    
T  38458764 atcaactaggtcatttattgagggacggaggaagta 38458729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 30529177 - 30529311
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | |||| ||||||||||||| | |||||||||||||||||| ||  ||||||||||    
T  30529177 ctcgatgaatatttttaaaatattaaatttttataattttttttagtagaaaattgaagatatctaagataaaacatatgcattggtacttgtgtcagag 30529276  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||||||||| || |||||||||||||    
T  30529277 tcaactaggtcatttattgagggacggagggagta 30529311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 38 - 167
Target Start/End: Original strand, 45234972 - 45235101
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | || ||||||||||||||||| |||||||||||||||||| || |||||||||||    
T  45234972 ctcgatgaatatttttaaaatattaaatttttataattttttttagtaaagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagag 45235071  T
Q  138 tcaactaggtcatttatttagagacggagg 167  Q
    ||||||| |||| ||||| |||||||||||    
T  45235072 tcaactaagtcacttattcagagacggagg 45235101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 32565880 - 32565746
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | |||||||||||||||||||| || ||||||||||||||| || |||||||||||    
T  32565880 ctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagagaaaacatatgcattggtacgtgtgtcagag 32565781  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||| ||||| |||| |  |||||||||||||    
T  32565780 tcaactaagtcatctattgaaggacggagggagta 32565746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 38 - 177
Target Start/End: Complemental strand, 37281226 - 37281087
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | ||||||||||||||||| || ||||||||| |||||||  ||||| ||||||||    
T  37281226 ctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatataaaagataaaacacatgcatttgtatgtttgtcagag 37281127  T
Q  138 tcaactaggtcatttatttagagacggagggagtactatt 177  Q
    ||||||||||||| |||| || |||  |||||||||||||    
T  37281126 tcaactaggtcatctattgagggacaaagggagtactatt 37281087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 3529310 - 3529176
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||| | |||||||||||||||||||||| ||||        | |||||||||||| ||||||| |||||||||||||||||| || |||||||||||    
T  3529310 ctcgatcaatatttttaaaatattaaattttcataaattgttttagtagagaattgaatatatcaaagataaaacatatgcattggtacgtgtgtcagag 3529211  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||| ||||| ||| || |||||||||||||    
T  3529210 tcaactagatcattaattaagggacggagggagta 3529176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 16265167 - 16265033
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| ||||||||||||||||| |||| ||||        |||||||||||||||||||||| |||||||||||||||||| || |||||||  ||    
T  16265167 ctcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaag 16265068  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||| ||||||| |  |||||||||||||||    
T  16265067 tcaactagatcatttaatatgagacggagggagta 16265033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 41 - 172
Target Start/End: Original strand, 23569804 - 23569935
Alignment:
Q  41 gatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtca 140  Q
    ||||| |||||||||||||||||||||| ||||          |||||||||||||||||||| |||||||||||||||||| || |||||||  |||||    
T  23569804 gatgaatatttttaaaatattaaattttcataattttttttggtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtca 23569903  T
Q  141 actaggtcatttatttagagacggagggagta 172  Q
    ||||| ||||||||| || |||||||||||||    
T  23569904 actagatcatttattgagggacggagggagta 23569935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 24982485 - 24982351
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| ||||||||||||||||| |||| ||||        ||||||||||||||||||||||  ||||||||||||||||| || |||||||  ||    
T  24982485 ctcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatatcaaatataaaacatatgcattggtacgtgtgtcgaag 24982386  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||| ||||||| |  |||||||||||||||    
T  24982385 tcaactagatcatttaatatgagacggagggagta 24982351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 1849834 - 1849714
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaa-tagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcaga 136  Q
    ||||||||||||||||||||||||||||||||||||         | || ||||||||||||||||| |||||||||||||||||| ||| ||||| |||    
T  1849834 ctcgatgagtatttttaaaatattaaatttttataatttttttttagtatagaattgaagatatcaaagataaaacatatgcattggtatatgtgttaga 1849735  T
Q  137 gtcaactaggtcatttattta 157  Q
    ||||||||| ||| |||||||    
T  1849734 gtcaactagatcacttattta 1849714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 16266296 - 16266181
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| ||||||||||||||||| |||| ||||        |||||||||||||||||||||| |||||||||||||||||| || |||||||  ||    
T  16266296 ctcgatgaatatttttaaaatattaagttttcataaatttttttaatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaag 16266197  T
Q  138 tcaactaggtcattta 153  Q
    |||||||| |||||||    
T  16266196 tcaactagatcattta 16266181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 26441771 - 26441656
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| ||||||||||||||||| |||| ||||        |||||||||||||||||||||| |||||||||||||||||| || |||||||  ||    
T  26441771 ctcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaag 26441672  T
Q  138 tcaactaggtcattta 153  Q
    |||||||| |||||||    
T  26441671 tcaactagatcattta 26441656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 155
Target Start/End: Complemental strand, 29161976 - 29161859
Alignment:
Q  39 tcgatgagtatttttaaaatattaaatttttataannnnnnnnaa-tagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||| |||||||||||||||||||||||||||         | |||| ||||||||||||||| ||||||||||||| |||| || |||||||||||    
T  29161976 tcgatgaatatttttaaaatattaaatttttataaaaaaaaattagtagaaaattgaagatatcaaagataaaacatatgaattggtacgtgtgtcagag 29161877  T
Q  138 tcaactaggtcatttatt 155  Q
    |||||||| |||||||||    
T  29161876 tcaactagatcatttatt 29161859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 84 - 157
Target Start/End: Complemental strand, 42708592 - 42708519
Alignment:
Q  84 tagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttattta 157  Q
    ||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||  |||||||||||    
T  42708592 tagagaattgaagatatcaaatataaaacatatgcattggtatgtgtgtcagagtcaactaaatcatttattta 42708519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 38 - 150
Target Start/End: Original strand, 16751580 - 16751692
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||| ||||        |  |||||||| |||||||||| |||||||||||||||||| || ||||||| |||    
T  16751580 ctcgatgaatatttttaaaatattaaattttcataattgtgtttagaagagaattaaagatatcaaagataaaacatatgcattggtacgtgtgtcggag 16751679  T
Q  138 tcaactaggtcat 150  Q
    |||||||||||||    
T  16751680 tcaactaggtcat 16751692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 38 - 150
Target Start/End: Original strand, 38738105 - 38738217
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||| ||||        | | |||||||||| ||||||| |||||||||||||||||| || ||||||| |||    
T  38738105 ctcgatgaatatttttaaaatattaaattttcataattttttttacttgagaattgaacatatcaaagataaaacatatgcattggtacgtgtgtcggag 38738204  T
Q  138 tcaactaggtcat 150  Q
    |||||||||||||    
T  38738205 tcaactaggtcat 38738217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 3898698 - 3898832
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| ||||||||||||||||| |||| ||||        |||||| ||||||||||||||| |||||||||||||||||| || || ||||  ||    
T  3898698 ctcgatgaatatttttaaaatattaagttttcataattttttttaatagaaaattgaagatatcaaagataaaacatatgcattggtacgtctgtcgaag 3898797  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||| ||||||| |  | |||||||||||||    
T  3898798 tcaactagatcatttaatatgggacggagggagta 3898832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 153
Target Start/End: Complemental strand, 47222299 - 47222233
Alignment:
Q  87 agaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcattta 153  Q
    ||||||||||||||||| |||||||||||||||||| || ||||||| |||||||||||||||||||    
T  47222299 agaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaactaggtcattta 47222233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 38 - 155
Target Start/End: Original strand, 31971514 - 31971631
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||| ||||        | |||||| ||||| ||||||| |||||||||||||||||| ||  ||||||||||    
T  31971514 ctcgatgaatatttttaaaatattaaattttcataattttttttagtagagagttgaatatatcaaagataaaacatatgcattggtacatgtgtcagag 31971613  T
Q  138 tcaactaggtcatttatt 155  Q
    |||||||| |||| ||||    
T  31971614 tcaactagatcatctatt 31971631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 43680204 - 43680069
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnn-aatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcaga 136  Q
    |||||||| ||||||||||||||||| |||| ||||         |||||||||||||||||||||| |||||||||||||||||| || | |||||  |    
T  43680204 ctcgatgaatatttttaaaatattaagttttcataatttttttttaatagagaattgaagatatcaaagataaaacatatgcattggtacgcgtgtcgaa 43680105  T
Q  137 gtcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||| ||||||| |  | |||||||||||||    
T  43680104 gtcaactagatcatttaatatgggacggagggagta 43680069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 82 - 172
Target Start/End: Complemental strand, 50481368 - 50481278
Alignment:
Q  82 aatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||||||||||||| |||||||||||||||||| || ||||||| || ||||||| ||||| || |  | |||||||||||||    
T  50481368 aatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggaatcaactaagtcatctaatatgggacggagggagta 50481278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 86 - 155
Target Start/End: Complemental strand, 48376244 - 48376175
Alignment:
Q  86 gagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatt 155  Q
    |||||||||||||||||| |||||||||||||||||| || |||||||| ||| ||||||||||| ||||    
T  48376244 gagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcaaagttaactaggtcatctatt 48376175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 38 - 150
Target Start/End: Complemental strand, 23330586 - 23330474
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||| | |||||||||||||||||||||| ||||        ||||||||||||||||||| || |||||||||||||||||||||  | |||| ||     
T  23330586 ctcgataaatatttttaaaatattaaattttcataattttttttaatagagaattgaagatatgaaagataaaacatatgcattgatacatatgtcggaa 23330487  T
Q  138 tcaactaggtcat 150  Q
    |||||||| ||||    
T  23330486 tcaactagatcat 23330474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 173
Target Start/End: Complemental strand, 4605083 - 4604997
Alignment:
Q  87 agaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagagacggagggagtac 173  Q
    |||||| |||||||||| |||||||||||||||||| || ||||||| ||||||||||| |||| |||  || ||||||||| ||||    
T  4605083 agaattaaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaactagatcatctatcgagggacggagggggtac 4604997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 143
Target Start/End: Complemental strand, 14075868 - 14075764
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||| ||||        | || | |||||||||||||||  ||||||||||||||||| |||||||||| |||    
T  14075868 ctcgatgaatatttttaaaatattaaattttcataattttttt-agtaaataattgaagatatcaaatataaaacatatgcattggtatgtgtgtcggag 14075770  T
Q  138 tcaact 143  Q
    ||||||    
T  14075769 tcaact 14075764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 141
Target Start/End: Original strand, 38737508 - 38737608
Alignment:
Q  41 gatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtca 140  Q
    ||||||||||||||| |||||||||||| ||||        |||| |||||| ||||||| ||  |||||| |||||||||||||| |||||||||||||    
T  38737508 gatgagtatttttaatatattaaattttcataattttttttaataaagaattaaagatattaaatataaaaaatatgcattgatatatgtgtcagagtca 38737607  T
Q  141 a 141  Q
    |    
T  38737608 a 38737608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 31698759 - 31698821
Alignment:
Q  82 aatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaacta 144  Q
    |||||| |||| || |||| || ||| ||| ||||||||||||||||||||||||||||||||    
T  31698759 aatagataattaaatatattaaagattaaatatatgcattgatatgtgtgtcagagtcaacta 31698821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 131
Target Start/End: Original strand, 41501734 - 41501828
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaa-tagagaattgaagatatcaatgataaaacatatgcattgatatgtgtg 131  Q
    |||||||| |||||||||||||| ||||||||||||         | |||||||||||| ||||||| |||||||||||||||||| || |||||    
T  41501734 ctcgatgaatatttttaaaatatcaaatttttataatttttttttagtagagaattgaatatatcaaagataaaacatatgcattggtacgtgtg 41501828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 23391321 - 23391260
Alignment:
Q  108 aaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagagacggaggga 169  Q
    |||| |||||||||||||||||| ||| ||||||||||||||| || | | |||||||||||    
T  23391321 aaaaaatatgcattgatatgtgtatcatagtcaactaggtcatctaataaaagacggaggga 23391260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 172
Target Start/End: Complemental strand, 45234884 - 45234849
Alignment:
Q  137 gtcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||| ||||||||||||||||    
T  45234884 gtcaactaggtcatttattaagagacggagggagta 45234849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 70
Target Start/End: Complemental strand, 27581010 - 27580978
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaattttta 70  Q
    |||||||| ||||||||||||||||||||||||    
T  27581010 ctcgatgaatatttttaaaatattaaattttta 27580978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 8e-51; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 38 - 175
Target Start/End: Original strand, 5744210 - 5744347
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  5744210 ctcgatgagtatttttaaaatattaaatttttataattttttttaatagagaattgaagatatcaaagataaaacatatacattgatatgtgtgtcagag 5744309  T
Q  138 tcaactaggtcatttatttagagacggagggagtacta 175  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  5744310 tcaactaggtcatttatttagggacggagggagtacta 5744347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 38 - 177
Target Start/End: Original strand, 46212477 - 46212616
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  46212477 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 46212576  T
Q  138 tcaactaggtcatttatttagagacggagggagtactatt 177  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  46212577 tcaactaggtcatttatttagggacggagggagtattatt 46212616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 3901266 - 3901400
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  3901266 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 3901365  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||||| |||||||||||||    
T  3901366 tcaactaggtcatttatttagggacggagggagta 3901400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 5735405 - 5735271
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  5735405 ctcgatgagtatttttaaaatattaaatttttataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 5735306  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||| |||||||||||| |||||||||||||    
T  5735305 tcaactagatcatttatttagggacggagggagta 5735271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 6494722 - 6494588
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | ||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  6494722 ctcgatgagtatttttaaaatattaaatttttataaatttttttagtagagaattgaagatattaaagataaaacatatgcattgatatgtgtgtcagag 6494623  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||||| |||||||| ||||    
T  6494622 tcaactaggtcatttatttagggacggaggaagta 6494588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 28166408 - 28166274
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  28166408 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 28166309  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||| |||||||||||| |||||||||||||    
T  28166308 tcaactagatcatttatttagggacggagggagta 28166274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 45198467 - 45198601
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  45198467 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 45198566  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||| |||||||||||| |||||||||||||    
T  45198567 tcaactagatcatttatttagggacggagggagta 45198601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 38 - 178
Target Start/End: Original strand, 3442471 - 3442611
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||| ||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  3442471 ctcgatgagtatttttaaaatattaaaattttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 3442570  T
Q  138 tcaactaggtcatttatttagagacggagggagtactattt 178  Q
    ||||||| ||||||||||||| ||||||||||||| |||||    
T  3442571 tcaactatgtcatttatttagggacggagggagtagtattt 3442611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 46803766 - 46803631
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaa-tagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcaga 136  Q
    ||||||||||||||||||||||||||||||||||||         | |||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  46803766 ctcgatgagtatttttaaaatattaaatttttataatttttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcaga 46803667  T
Q  137 gtcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||||||||||||| |||||||||||||    
T  46803666 gtcaactaggtcatttatttagggacggagggagta 46803631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 4264268 - 4264134
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  4264268 ctcgatgagtatttttaaaatattaaatttttataattttttttactagataattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 4264169  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||||||||| || |||||||||||||    
T  4264168 tcaactaggtcatttattgagggacggagggagta 4264134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 26205831 - 26205965
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  26205831 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtaagag 26205930  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||| |||||||||||| |||||||||||||    
T  26205931 tcaactagatcatttatttagggacggagggagta 26205965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 47579420 - 47579287
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  47579420 ctcgatgagtatttttaaaatattaaatttttataattttttt-agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtaagag 47579322  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||||| |||||||||||||    
T  47579321 tcaactaggtcatttatttagggacggagggagta 47579287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 38 - 170
Target Start/End: Complemental strand, 28152125 - 28151993
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | ||||||||||||||||||||  ||||||||||||||||| ||||||||||||||    
T  28152125 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaatataaaacatatgcattggtatgtgtgtcagag 28152026  T
Q  138 tcaactaggtcatttatttagagacggagggag 170  Q
    ||||||||||||||||||||  |||||||||||    
T  28152025 tcaactaggtcatttatttaaggacggagggag 28151993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 38 - 170
Target Start/End: Complemental strand, 49768579 - 49768447
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||||||||| ||||| ||    
T  49768579 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattgatatgtatgtcatag 49768480  T
Q  138 tcaactaggtcatttatttagagacggagggag 170  Q
    ||||||| ||||||||||||| |||||||||||    
T  49768479 tcaactaagtcatttatttagggacggagggag 49768447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 38 - 173
Target Start/End: Original strand, 21859046 - 21859181
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||| ||||||| ||||||||||||| |||| ||||||||||||||    
T  21859046 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaaaatatcaaagataaaacatatgtattggtatgtgtgtcagag 21859145  T
Q  138 tcaactaggtcatttatttagagacggagggagtac 173  Q
    |||||||||| |||||||||| ||||||||||||||    
T  21859146 tcaactaggttatttatttagggacggagggagtac 21859181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 38 - 173
Target Start/End: Original strand, 21914909 - 21915044
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||| ||||||| ||||||||||||| |||| ||||||||||||||    
T  21914909 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaaaatatcaaagataaaacatatgtattggtatgtgtgtcagag 21915008  T
Q  138 tcaactaggtcatttatttagagacggagggagtac 173  Q
    |||||||||| |||||||||| ||||||||||||||    
T  21915009 tcaactaggttatttatttagggacggagggagtac 21915044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 38 - 167
Target Start/End: Original strand, 37688160 - 37688289
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  37688160 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 37688259  T
Q  138 tcaactaggtcatttatttagagacggagg 167  Q
    ||| |||| |||||||||||| ||||||||    
T  37688260 tcatctagatcatttatttagggacggagg 37688289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 7738946 - 7739080
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | |||||||||||| ||||||| ||||||||||||||||||||| ||||||| |||    
T  7738946 ctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaatatatcaaagataaaacatatgcattgatacgtgtgtcggag 7739045  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||||| |||||| ||||||    
T  7739046 tcaactaggtcatttatttagggacggatggagta 7739080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 39786484 - 39786617
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | |||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  39786484 ctcgatgaatatttttaaaatattaaatttttataattttttt-agtagagaattgaagatatcaaagataaaacatatgcattgatacgtgtgtcagag 39786582  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||| |||| || |||||||||||||    
T  39786583 tcaactaggtcatctattgagggacggagggagta 39786617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 38 - 173
Target Start/End: Original strand, 18360100 - 18360235
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| ||||||||||||||| |||||||||||        | |||||||||||||||||||| |||||||||||||||||| || ||| |||||||    
T  18360100 ctcgatgaatatttttaaaatattgaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgcgtcagag 18360199  T
Q  138 tcaactaggtcatttatttagagacggagggagtac 173  Q
    ||||||||||||| |||| || ||||||||||||||    
T  18360200 tcaactaggtcatctattgagggacggagggagtac 18360235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 38 - 173
Target Start/End: Complemental strand, 36602828 - 36602693
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| ||||||||||||||| |||||||||||        | |||||||||||||||||||| |||||||||||||||||| || ||| |||||||    
T  36602828 ctcgatgaatatttttaaaatattgaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgcgtcagag 36602729  T
Q  138 tcaactaggtcatttatttagagacggagggagtac 173  Q
    ||||||||||||| |||| || ||||||||||||||    
T  36602728 tcaactaggtcatctattgagggacggagggagtac 36602693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 41 - 172
Target Start/End: Original strand, 55190844 - 55190975
Alignment:
Q  41 gatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtca 140  Q
    ||||| |||||||||||||||||||||||||||        |||||| ||||||||||||||| |||||||||||||||||| || ||||||||||||||    
T  55190844 gatgaatatttttaaaatattaaatttttataattttttttaatagataattgaagatatcaaagataaaacatatgcattggtaagtgtgtcagagtca 55190943  T
Q  141 actaggtcatttatttagagacggagggagta 172  Q
    |||||||||| |||| || |||||||| ||||    
T  55190944 actaggtcatctattgagggacggaggaagta 55190975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 38 - 155
Target Start/End: Complemental strand, 1377166 - 1377049
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||| ||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||||| ||    
T  1377166 ctcgatgagtatttttaaaatataaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcatag 1377067  T
Q  138 tcaactaggtcatttatt 155  Q
    ||||||| ||||||||||    
T  1377066 tcaactacgtcatttatt 1377049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 23256069 - 23255935
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| ||||||||||||||| |||||||||||        | ||||||||||||||||||||  |||||| |||||||||| || |||||||||||    
T  23256069 ctcgatgaatatttttaaaatattgaatttttataatttattttagtagagaattgaagatatcaaatataaaatatatgcattggtacgtgtgtcagag 23255970  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||| |||| || |||||||||||||    
T  23255969 tcaactaggtcatctattgagggacggagggagta 23255935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 42 - 167
Target Start/End: Original strand, 20678719 - 20678843
Alignment:
Q  42 atgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaa 141  Q
    ||||||||||||||| ||||||||||||||||        | |||||||||||| ||||||| ||||||| |||||||||||||| ||||||||||||||    
T  20678719 atgagtatttttaaa-tattaaatttttataattttttttagtagagaattgaaaatatcaaagataaaatatatgcattgatatatgtgtcagagtcaa 20678817  T
Q  142 ctaggtcatttatttagagacggagg 167  Q
    |||| |||||||||||| ||||||||    
T  20678818 ctagatcatttatttagggacggagg 20678843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 41 - 172
Target Start/End: Original strand, 5123287 - 5123418
Alignment:
Q  41 gatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtca 140  Q
    ||||| |||||||||||||||||||||||||||        | |||| ||||||||||||||| |||||||||||||||||| || ||||||||||||||    
T  5123287 gatgaatatttttaaaatattaaatttttataattttttttagtagataattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtca 5123386  T
Q  141 actaggtcatttatttagagacggagggagta 172  Q
    |||| ||||| |||| || || ||||||||||    
T  5123387 actaagtcatctattgagggatggagggagta 5123418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 4209496 - 4209363
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||| ||||||||||||        | |||||||||||||||||||| ||||||||||||| |||| || |||||||||||    
T  4209496 ctcgatgaatatttttaaaatataaaatttttataattttttt-agtagagaattgaagatatcaaagataaaacatatgtattggtacgtgtgtcagag 4209398  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||| |||| |||| || |||||||||||||    
T  4209397 tcaactagatcatctattgagggacggagggagta 4209363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 38 - 152
Target Start/End: Complemental strand, 53568488 - 53568374
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| ||||||| |||||||||||||| ||||        | || ||||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  53568488 ctcgatgaatattttttaaatattaaattttcataaaattttttagtaaagaattgaagatatcaaagataaaacatatgcattgatatgtgtgtcggag 53568389  T
Q  138 tcaactaggtcattt 152  Q
    ||||||||| |||||    
T  53568388 tcaactaggacattt 53568374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 38 - 175
Target Start/End: Original strand, 3443514 - 3443651
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||  || |||||||||||    
T  3443514 ctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcatttgtacgtgtgtcagag 3443613  T
Q  138 tcaactaggtcatttatttagagacggagggagtacta 175  Q
    |||| ||  ||| ||||| |||  |||| |||||||||    
T  3443614 tcaattaaatcacttattcagaaccggacggagtacta 3443651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 25644493 - 25644378
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| ||||||||||||| |||||||| ||||        |||||||||||||||||||||| |||||||||||||||||| || |||||||  ||    
T  25644493 ctcgatgaatatttttaaaatagtaaattttcataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaag 25644394  T
Q  138 tcaactaggtcattta 153  Q
    |||||||| |||||||    
T  25644393 tcaactagatcattta 25644378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 6923067 - 6923201
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||| || |         ||||||||||||||||||||| |||||||||||||||||| || |||||||  ||    
T  6923067 ctcgatgaatatttttaaaatattaaattttcattatttttttttatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaag 6923166  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||| ||||||| |   ||||||||||||||    
T  6923167 tcaactagatcatttaatataagacggagggagta 6923201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 38 - 143
Target Start/End: Complemental strand, 39194046 - 39193941
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||| ||||        ||||||||||  ||||||| || ||||||| |||||||||||||| ||||||||||    
T  39194046 ctcgatgagtatttttaaaatattaaattttcataattgtttttaatagagaatgaaagatattaaagataaaagatatgcattgatatatgtgtcagag 39193947  T
Q  138 tcaact 143  Q
    ||||||    
T  39193946 tcaact 39193941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 50033150 - 50033042
Alignment:
Q  42 atgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaa 141  Q
    |||| |||||||||||||||||||||| ||||        | |||||||||||||||||||| |||||||||||||||||| || ||||||| |||||||    
T  50033150 atgaatatttttaaaatattaaattttcataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaa 50033051  T
Q  142 ctaggtcat 150  Q
    ||| |||||    
T  50033050 ctaagtcat 50033042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 50035669 - 50035561
Alignment:
Q  42 atgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaa 141  Q
    |||| |||||||||||||||||||||| ||||        | ||||||||||||||| |||| ||||||||||||||||||||| ||||||| |||||||    
T  50035669 atgaatatttttaaaatattaaattttcataattttttttagtagagaattgaagatttcaaagataaaacatatgcattgatacgtgtgtcggagtcaa 50035570  T
Q  142 ctaggtcat 150  Q
    |||| ||||    
T  50035569 ctagatcat 50035561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 153
Target Start/End: Original strand, 19525841 - 19525956
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| ||||||||||||||||| |||| ||||        | || ||||||||||||||||| |||||||||||||||||| || |||||||  ||    
T  19525841 ctcgatgaatatttttaaaatattaagttttcataattttttttagtaaagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaag 19525940  T
Q  138 tcaactaggtcattta 153  Q
    ||||||||||||||||    
T  19525941 tcaactaggtcattta 19525956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 150
Target Start/End: Original strand, 19731293 - 19731404
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||| ||||        | ||||| |||||||||||||| |||||||||||||||||| || ||||||| |||    
T  19731293 ctcgatgaatatttttaaaatattaaattttcataattgtttt-agtagagcattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggag 19731391  T
Q  138 tcaactaggtcat 150  Q
    |||||||||||||    
T  19731392 tcaactaggtcat 19731404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 38 - 144
Target Start/End: Original strand, 42187106 - 42187212
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | ||||||||| |||||||||| ||||||| |||||||||| || || ||||||||    
T  42187106 ctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattaaagatatcaaagataaaatatatgcattggtacgtatgtcagag 42187205  T
Q  138 tcaacta 144  Q
    |||||||    
T  42187206 tcaacta 42187212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 41 - 150
Target Start/End: Complemental strand, 19631439 - 19631330
Alignment:
Q  41 gatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtca 140  Q
    ||||| |||||| ||||||||||||||| ||||        |||||||||||||||||||||| |||||||||||||||||| || ||||||| ||||||    
T  19631439 gatgaatattttaaaaatattaaattttcataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtca 19631340  T
Q  141 actaggtcat 150  Q
    | || |||||    
T  19631339 attaagtcat 19631330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 26659973 - 26659840
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||| ||||        | |||||||||||||||||||| | ||||||||||||| |||||  |||||| |||    
T  26659973 ctcgatgaatatttttaaaatattaaattttcataattttttt-attagagaattgaagatatcaaagctaaaacatatgcagtgatacatgtgtcggag 26659875  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||| || |  |||||| ||||||||    
T  26659874 tcaactaggtcatataatatgagacgcagggagta 26659840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 39260259 - 39260391
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | |||||||||||||||||||| ||||||| ||||| |||| ||  ||||||||||    
T  39260259 ctcgatgaatatttttaaaatattaaatttttataattttttt-agtagagaattgaagatatcaaagataaaatatatgtattggtacatgtgtcagag 39260357  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||| |||| |||| || ||| |||||||||    
T  39260358 tcaactagatcatctattgagggac-gagggagta 39260391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 84 - 172
Target Start/End: Original strand, 19634021 - 19634109
Alignment:
Q  84 tagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||||||||||| ||||||||||||| |||| || ||||||| ||||||||||| |||| |||| || |||| ||||||||    
T  19634021 tagagaattgaagatatcaaagataaaacatatgaattggtacgtgtgtcggagtcaactagatcatctattaagggacgaagggagta 19634109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 19170666 - 19170800
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||| ||||          ||||||||||||||||| || ||||||| |||||||||| ||  ||||||  ||    
T  19170666 ctcgatgaatatttttaaaatattaaattttcataattttttttggtagagaattgaagatattaaagataaaatatatgcattggtacatgtgtcgaag 19170765  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||| |||| || ||||||| |||||    
T  19170766 tcaactaggtcatctattgagggacggagcgagta 19170800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 38 - 140
Target Start/End: Complemental strand, 55997248 - 55997146
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||| ||||||| ||||        |||||||||||||||||||||| |||||||| ||||||||| || ||||||| |||    
T  55997248 ctcgatgaatatttttaaaatataaaattttcataattttttttaatagagaattgaagatatcaaagataaaacgtatgcattggtacgtgtgtcggag 55997149  T
Q  138 tca 140  Q
    |||    
T  55997148 tca 55997146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 38 - 147
Target Start/End: Complemental strand, 55014396 - 55014287
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||| ||||        |||| | ||||||| ||||||| |||||||||||||||||  || ||||||| |||    
T  55014396 ctcgatgaatatttttaaaatattaaattttcataatttttcttaatacacaattgaatatatcaaagataaaacatatgcattagtacgtgtgtcggag 55014297  T
Q  138 tcaactaggt 147  Q
    ||||||||||    
T  55014296 tcaactaggt 55014287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 84 - 172
Target Start/End: Original strand, 19652428 - 19652516
Alignment:
Q  84 tagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||||||||||| ||||||||||||| |||| || || |||| ||||||||||| |||| |||| || |||||||| ||||    
T  19652428 tagagaattgaagatatcaaagataaaacatatgaattggtacgtatgtcggagtcaactagatcatatattgagggacggaggaagta 19652516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 39195675 - 39195742
Alignment:
Q  105 gataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| || | || |||| ||||||||    
T  39195675 gataaaaaatatgcattgatatgtgtgtcagagtcaactaggtcatctaataagggacgaagggagta 39195742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 38 - 141
Target Start/End: Complemental strand, 50971593 - 50971491
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | ||||||||| || |||||||  ||||||||||||||||| || |||||||||||    
T  50971593 ctcgatgaatatttttaaaatattaaatttttataatattttttagtagagaattaaatatatcaa-aataaaacatatgcattggtacgtgtgtcagag 50971495  T
Q  138 tcaa 141  Q
    ||||    
T  50971494 tcaa 50971491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 143
Target Start/End: Complemental strand, 10181113 - 10181017
Alignment:
Q  47 tatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaact 143  Q
    |||||||||||||||||||||| ||||        |||||| ||||||| |||| || ||||||||||||| |||| |||||||| |||||||||||    
T  10181113 tatttttaaaatattaaattttcataattttttctaatagataattgaaaatattaaagataaaacatatgtattggtatgtgtgacagagtcaact 10181017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 23603825 - 23603880
Alignment:
Q  89 aattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaacta 144  Q
    ||||||||||||||| ||||||||| |||||||| || ||||||||||||||||||    
T  23603825 aattgaagatatcaaagataaaacagatgcattggtacgtgtgtcagagtcaacta 23603880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 121
Target Start/End: Original strand, 27976697 - 27976780
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcatt 121  Q
    |||||| | |||||||||||||||||||||| ||||        || |||||||||||||||| || |||||||||||||||||    
T  27976697 ctcgataaatatttttaaaatattaaattttcataattttttataaaagagaattgaagatattaaagataaaacatatgcatt 27976780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 150
Target Start/End: Complemental strand, 14958067 - 14958030
Alignment:
Q  113 atatgcattgatatgtgtgtcagagtcaactaggtcat 150  Q
    |||||||||| |||||||||||||||||||||||||||    
T  14958067 atatgcattggtatgtgtgtcagagtcaactaggtcat 14958030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 51736919 - 51736822
Alignment:
Q  47 tatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaacta 144  Q
    |||||||||||||||||||||| | ||        |||||| |||| || |||| || ||| ||| ||||||||| ||||||||||||||||||||||    
T  51736919 tatttttaaaatattaaattttcaaaaaaatttcaaatagataattaaacatattaaagatcaaatatatgcattaatatgtgtgtcagagtcaacta 51736822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 51737130 - 51737189
Alignment:
Q  88 gaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggt 147  Q
    |||||||| |||| || |||||||||||||||||| || ||||||| |||||||| ||||    
T  51737130 gaattgaaaatataaaagataaaacatatgcattggtacgtgtgtcggagtcaacaaggt 51737189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 29424775 - 29424808
Alignment:
Q  40 cgatgagtatttttaaaatattaaatttttataa 73  Q
    ||||||||||||||||||||||||||||| ||||    
T  29424775 cgatgagtatttttaaaatattaaattttcataa 29424808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 30867371 - 30867407
Alignment:
Q  37 actcgatgagtatttttaaaatattaaatttttataa 73  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  30867371 actcgatgaatatttttaaaatatcaaatttttataa 30867407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 31486352 - 31486308
Alignment:
Q  106 ataaaacatatgcattgatatgtgtgtcagagtcaactaggtcat 150  Q
    |||||| |||||||||  ||||||||| |||||||||||||||||    
T  31486352 ataaaagatatgcattagtatgtgtgttagagtcaactaggtcat 31486308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 141
Target Start/End: Complemental strand, 35064061 - 35064025
Alignment:
Q  105 gataaaacatatgcattgatatgtgtgtcagagtcaa 141  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  35064061 gataaaaaatatgcattgatatatgtgtcagagtcaa 35064025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 5e-49; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 29627402 - 29627268
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29627402 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattgatatgtgtgtcagag 29627303  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||||| |||||||||||||    
T  29627302 tcaactaggtcatttatttagggacggagggagta 29627268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 38 - 174
Target Start/End: Original strand, 40512807 - 40512943
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  40512807 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 40512906  T
Q  138 tcaactaggtcatttatttagagacggagggagtact 174  Q
    |||||||||||| |||||||| |||||||||||||||    
T  40512907 tcaactaggtcacttatttagggacggagggagtact 40512943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 38698097 - 38697963
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  38698097 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 38697998  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||| |||||||||||||||| |||||||||||||    
T  38697997 tcaattaggtcatttatttagggacggagggagta 38697963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 42148441 - 42148307
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  42148441 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 42148342  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||| |||||||||||| |||||||||||||    
T  42148341 tcaactagatcatttatttagggacggagggagta 42148307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 38 - 173
Target Start/End: Original strand, 35448124 - 35448259
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||  ||        | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  35448124 ctcgatgagtatttttaaaatattaaattttttaaaaaaaatttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 35448223  T
Q  138 tcaactaggtcatttatttagagacggagggagtac 173  Q
    ||||||||||||||||||||| ||||||||||||||    
T  35448224 tcaactaggtcatttatttagggacggagggagtac 35448259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 38 - 171
Target Start/End: Complemental strand, 5364554 - 5364421
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  5364554 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaatatatcaaagataaaacatatgcattggtatgtgtgtcagag 5364455  T
Q  138 tcaactaggtcatttatttagagacggagggagt 171  Q
    |||||||||||| |||||||| ||||||||||||    
T  5364454 tcaactaggtcacttatttagggacggagggagt 5364421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 39894915 - 39894781
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  39894915 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcagag 39894816  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||| ||| |||||||| |||||||||||||    
T  39894815 tcaactagatcacttatttagggacggagggagta 39894781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 32334765 - 32334901
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnn--aatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcag 135  Q
    ||||||||||||||||||||||||||||||||||||          ||| |||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  32334765 ctcgatgagtatttttaaaatattaaatttttataattttttttttaatggagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcag 32334864  T
Q  136 agtcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  32334865 agtcaactaggtcatttatttagggacagagggagta 32334901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 32002141 - 32002275
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  32002141 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcagag 32002240  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||| ||| |||||||||||  |||||||||||||    
T  32002241 tcaagtagatcatttatttaaggacggagggagta 32002275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 4924965 - 4925099
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| || ||||||||| |    
T  4924965 ctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcaggg 4925064  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||| |||| || |||||||||||||    
T  4925065 tcaactaggtcatctattgagggacggagggagta 4925099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 5213049 - 5213183
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | ||||||||||||||||| || |||||||||||||||||| || |||||||||||    
T  5213049 ctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatattaaagataaaacatatgcattggtacgtgtgtcagag 5213148  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||| ||||| || |||||||||||||    
T  5213149 tcaactaggtcacttattcagggacggagggagta 5213183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 35290420 - 35290286
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | |||||||||||||||||||| ||||||| |||||||||| || |||||||||||    
T  35290420 ctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaatatatgcattggtacgtgtgtcagag 35290321  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||| |||| || |||||||||||||    
T  35290320 tcaactaggtcatctattgagggacggagggagta 35290286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 39036544 - 39036410
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||| ||||| || |||||||||||    
T  39036544 ctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatacattggtacgtgtgtcagag 39036445  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||| ||||| |||| ||||||||||||||||    
T  39036444 tcaactatgtcatctattgagagacggagggagta 39036410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 84 - 172
Target Start/End: Complemental strand, 23988667 - 23988579
Alignment:
Q  84 tagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagagacggagggagta 172  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  23988667 tagataattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 23988579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 37516279 - 37516144
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaa-tagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcaga 136  Q
    |||||||| |||||||||||||||||| ||||||||         | |||||||||||||||||||| |||||||||||||||||| || ||||||||||    
T  37516279 ctcgatgaatatttttaaaatattaaacttttataaaaaaaaattagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcaga 37516180  T
Q  137 gtcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||| |||| |||| || |||||||||||||    
T  37516179 gtcaactagatcatctattgagggacggagggagta 37516144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 38 - 178
Target Start/End: Original strand, 37843702 - 37843842
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||| ||||          ||||||||||||||||||||  ||||||||||||||||| || |||||||||||    
T  37843702 ctcgatgaatatttttaaaatattaaattttcataatttttttttgtagagaattgaagatatcaaatataaaacatatgcattggtacgtgtgtcagag 37843801  T
Q  138 tcaactaggtcatttatttagagacggagggagtactattt 178  Q
    ||||||||||||| |||| || |||| || ||||| |||||    
T  37843802 tcaactaggtcatctattgagggacgaagagagtattattt 37843842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 970272 - 970138
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| ||||||||||||||||| |||| ||||        |||||||||||||||||| ||| |||||||||||||||||| || |||||||  ||    
T  970272 ctcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagataacaaagataaaacatatgcattggtacgtgtgtcgaag 970173  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||| ||||||| |  |||||||||||||||    
T  970172 tcaactagatcatttaatatgagacggagggagta 970138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 38 - 155
Target Start/End: Original strand, 43517187 - 43517304
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| ||||||||||||||||| |||||||||        | ||||||||||| |||||||| |||||||||||||||||  || |||||||||||    
T  43517187 ctcgatgaatatttttaaaatattaattttttataattttttttagtagagaattgatgatatcaaagataaaacatatgcattagtacgtgtgtcagag 43517286  T
Q  138 tcaactaggtcatttatt 155  Q
    ||||||||||||| ||||    
T  43517287 tcaactaggtcatctatt 43517304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 84 - 172
Target Start/End: Original strand, 41411331 - 41411419
Alignment:
Q  84 tagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||||||||||| |||||||||||||||||| || |||||||  ||||||||| ||||| |||| || |||||||||||||    
T  41411331 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactaagtcatctattgagggacggagggagta 41411419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 153
Target Start/End: Original strand, 22613836 - 22613951
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| ||||||||||||||||| |||| ||||        |||||| ||||||||||||||| |||||||||||||||||| || |||||||  ||    
T  22613836 ctcgatgaatatttttaaaatattaagttttcataattttttttaatagaaaattgaagatatcaaagataaaacatatgcattggtacgtgtgtctaag 22613935  T
Q  138 tcaactaggtcattta 153  Q
    |||||||| |||||||    
T  22613936 tcaactagatcattta 22613951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 43067363 - 43067248
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| ||||||||||||||||| |||| ||||        |||| ||||||||||||||||| |||||||||||||||||| || |||||||  ||    
T  43067363 ctcgatgaatatttttaaaatattaagttttcataattttttttaataaagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaag 43067264  T
Q  138 tcaactaggtcattta 153  Q
    |||||||| |||||||    
T  43067263 tcaactagatcattta 43067248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 82 - 172
Target Start/End: Original strand, 4300003 - 4300093
Alignment:
Q  82 aatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||||||||||||| |||||||||||||||||| || |||||||  |||||||||| ||||||| |  |||||||||| ||||    
T  4300003 aatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgagacggaggaagta 4300093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 84 - 165
Target Start/End: Original strand, 14475407 - 14475488
Alignment:
Q  84 tagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagagacgga 165  Q
    |||||||||||||||||||| |||||||||||||||||  || ||||||| |||||||||||||||| |||| || ||||||    
T  14475407 tagagaattgaagatatcaaagataaaacatatgcatttgtacgtgtgtcggagtcaactaggtcatctattaagggacgga 14475488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 84 - 172
Target Start/End: Complemental strand, 1830742 - 1830654
Alignment:
Q  84 tagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||||||||||| |||||||||||||||||| ||  ||||||  ||||||||| ||||| |||| || |||||||||||||    
T  1830742 tagagaattgaagatatcaaagataaaacatatgcattggtacatgtgtcgaagtcaactaagtcatctattgagggacggagggagta 1830654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 41 - 178
Target Start/End: Original strand, 30779876 - 30780012
Alignment:
Q  41 gatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtca 140  Q
    ||||| |||||||||||||||||||||| ||||        | ||| ||||||||||||| || ||||||||||||| |||| || ||||||| ||||||    
T  30779876 gatgaatatttttaaaatattaaattttcataattttttt-agtagtgaattgaagatatgaaagataaaacatatgtattggtacgtgtgtcggagtca 30779974  T
Q  141 actaggtcatttatttagagacggagggagtactattt 178  Q
    |||||||||| |||| ||  |||||||||||| |||||    
T  30779975 actaggtcatctattgaggaacggagggagtaatattt 30780012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 84 - 172
Target Start/End: Complemental strand, 40316209 - 40316121
Alignment:
Q  84 tagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||||||||||| |||||||||||||||||| ||  ||||||  ||||||||| ||||| |||| || |||||||||||||    
T  40316209 tagagaattgaagatatcaaagataaaacatatgcattggtacatgtgtcgaagtcaactaagtcatctattgagggacggagggagta 40316121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 38 - 174
Target Start/End: Complemental strand, 19889787 - 19889652
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| ||||||||||||||| |||||| ||||        | |||||||||||||||||||| |||||||||||||||||| || |||| || |||    
T  19889787 ctcgatgaatatttttaaaatattcaattttcataattttttt-agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtatcggag 19889689  T
Q  138 tcaactaggtcatttatttagagacggagggagtact 174  Q
    ||||||||||| | || |  ||||| |||||||||||    
T  19889688 tcaactaggtcctctaatatgagacagagggagtact 19889652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 82 - 152
Target Start/End: Complemental strand, 16048173 - 16048103
Alignment:
Q  82 aatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcattt 152  Q
    |||||||||||||||||||||| |||||||||||||||||| || |||||||  |||||||||| ||||||    
T  16048173 aatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcattt 16048103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 39405898 - 39405764
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| | ||||||||||||||| |||| ||||        ||||||||||||||||||| || |||||||||||||||||| || |||| ||  ||    
T  39405898 ctcgatgaatctttttaaaatattaagttttcataattttttttaatagagaattgaagatattaaagataaaacatatgcattggtacgtgtctcgaag 39405799  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||| ||||||| |  | |||||||||||||    
T  39405798 tcaactagatcatttaatatgggacggagggagta 39405764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 38 - 143
Target Start/End: Complemental strand, 21961361 - 21961256
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||| ||||||||||||||| ||||        |||||| |||| ||||||| || ||||||||||||| ||||||||||||| |||||    
T  21961361 ctcgatgaatattttcaaaatattaaattttaataattttttctaatagataattaaagatattaaagataaaacatatgaattgatatgtgtgacagag 21961262  T
Q  138 tcaact 143  Q
    ||||||    
T  21961261 tcaact 21961256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 38 - 150
Target Start/End: Complemental strand, 25563634 - 25563522
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | || | ||||||||||||||| ||||||||||||||||||  | ||||||   ||    
T  25563634 ctcgatgaatatttttaaaatattaaatttttataatttgttttagtataaaattgaagatatcaaagataaaacatatgcattggaacgtgtgttgaag 25563535  T
Q  138 tcaactaggtcat 150  Q
    |||||||||||||    
T  25563534 tcaactaggtcat 25563522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 42421773 - 42421707
Alignment:
Q  84 tagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcat 150  Q
    |||||||||||||||||||| |||||||||||||||| | || ||||||| ||||||||||| ||||    
T  42421773 tagagaattgaagatatcaaagataaaacatatgcataggtacgtgtgtcggagtcaactagatcat 42421707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 38 - 139
Target Start/End: Complemental strand, 24520342 - 24520242
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||| | |||||||||||||||||||||| ||||        ||||||||||||||||||||||  ||||||||||| |||||||| ||||||| |||    
T  24520342 ctcgataaatatttttaaaatattaaattttcataaaaaattttaatagagaattgaagatatcaaa-ataaaacatatacattgatacgtgtgtcggag 24520244  T
Q  138 tc 139  Q
    ||    
T  24520243 tc 24520242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 15268200 - 15268138
Alignment:
Q  82 aatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaacta 144  Q
    ||||||||||||||||||| ||  |||||||||||||||| ||| ||||||| ||||||||||    
T  15268200 aatagagaattgaagatattaaaaataaaacatatgcattaatacgtgtgtcggagtcaacta 15268138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 144
Target Start/End: Original strand, 19868813 - 19868918
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||| ||||        | |||| ||||||| ||| ||| |||||||||||||||||| || ||||||| |||    
T  19868813 ctcgatgaatatttttaaaatattaaattttcataatattttt-agtagacaattgaaaatagcaaagataaaacatatgcattggtacgtgtgtcggag 19868911  T
Q  138 tcaacta 144  Q
    |||||||    
T  19868912 tcaacta 19868918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 172
Target Start/End: Complemental strand, 16954749 - 16954690
Alignment:
Q  113 atatgcattgatatgtgtgtcagagtcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||| || |||||||||||||||||| ||||| |||| || |||||||||||||    
T  16954749 atatgcattggtacgtgtgtcagagtcaactaagtcatctattgagggacggagggagta 16954690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 32300660 - 32300589
Alignment:
Q  82 aatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcattta 153  Q
    |||||| |||| ||||||| || ||||||| |||||||||||||| |||| |||||||||||  ||||||||    
T  32300660 aatagataattaaagatattaaagataaaaaatatgcattgatatttgtgacagagtcaactgtgtcattta 32300589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 150
Target Start/End: Original strand, 19087941 - 19088009
Alignment:
Q  82 aatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcat 150  Q
    |||| ||||||||||||||||   ||||||| ||||||||| || ||||||| |||||||||| |||||    
T  19087941 aataaagaattgaagatatcataaataaaacttatgcattggtacgtgtgtcggagtcaactacgtcat 19088009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 172
Target Start/End: Complemental strand, 5212957 - 5212922
Alignment:
Q  137 gtcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||| ||||||||||||||||    
T  5212957 gtcaactaggtcatttattaagagacggagggagta 5212922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 37272814 - 37272849
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataa 73  Q
    |||||||| |||||||||||||||||||||||||||    
T  37272814 ctcgatgaatatttttaaaatattaaatttttataa 37272849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 37304361 - 37304406
Alignment:
Q  127 gtgtgtcagagtcaactaggtcatttatttagagacggagggagta 172  Q
    |||| |||||||||||||||||| ||||| || |||||||||||||    
T  37304361 gtgtatcagagtcaactaggtcacttattcagggacggagggagta 37304406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 5e-49; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 18718373 - 18718239
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18718373 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattgatatgtgtgtcagag 18718274  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||||| |||||||||||||    
T  18718273 tcaactaggtcatttatttagggacggagggagta 18718239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 38 - 175
Target Start/End: Complemental strand, 27559709 - 27559572
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  27559709 ctcgatgagtatttttaaaatattaaatttttataattttttttaatagagaattgaagatatcaaagataaaacatatacattgatatgtgtgtcagag 27559610  T
Q  138 tcaactaggtcatttatttagagacggagggagtacta 175  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  27559609 tcaactagatcatttatttagggacggagggagtacta 27559572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 23671510 - 23671376
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  23671510 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 23671411  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||||| |||||||||||||    
T  23671410 tcaactaggtcatttatttagggacggagggagta 23671376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 38 - 177
Target Start/End: Complemental strand, 42038657 - 42038518
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  42038657 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 42038558  T
Q  138 tcaactaggtcatttatttagagacggagggagtactatt 177  Q
    |||||||||||| |||||||| ||||||||||||| ||||    
T  42038557 tcaactaggtcacttatttagggacggagggagtattatt 42038518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 34827046 - 34826912
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||||||||||||||||||| |||||||||||        |||||||||||||||||||||| |||||||||||||||||  ||||||||||||||    
T  34827046 ctcgatgagtatttttaaaatattgaatttttataattttttttaatagagaattgaagatatcaaagataaaacatatgcattagtatgtgtgtcagag 34826947  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||||| |||||||||||||    
T  34826946 tcaactaggtcatttatttagggacggagggagta 34826912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 38 - 173
Target Start/End: Original strand, 3987359 - 3987494
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  3987359 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgtattggtatgtgtgtcagag 3987458  T
Q  138 tcaactaggtcatttatttagagacggagggagtac 173  Q
    |||||||| |||||||||||| ||||||||||||||    
T  3987459 tcaactagatcatttatttagggacggagggagtac 3987494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 38 - 169
Target Start/End: Original strand, 14707661 - 14707792
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | || ||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  14707661 ctcgatgagtatttttaaaatattaaatttttataattttttttagtaaagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 14707760  T
Q  138 tcaactaggtcatttatttagagacggaggga 169  Q
    ||||||||||||||||||||| ||||||||||    
T  14707761 tcaactaggtcatttatttagggacggaggga 14707792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 38 - 178
Target Start/End: Complemental strand, 20517552 - 20517413
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  20517552 ctcgatgagtatttttaaaatattaaatttttataattttttt-agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 20517454  T
Q  138 tcaactaggtcatttatttagagacggagggagtactattt 178  Q
    |||| || ||||||||||||||||||||||||||| |||||    
T  20517453 tcaattatgtcatttatttagagacggagggagtattattt 20517413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 14372211 - 14372077
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||| |||||||||||||||||||||||||| ||        | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  14372211 ctcgataagtatttttaaaatattaaatttttaaaattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 14372112  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||||| |||||||||||||    
T  14372111 tcaactaggtcatttatttagggacggagggagta 14372077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 41172884 - 41173018
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  41172884 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagaaaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 41172983  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||| |||||||||||||||| |||||||||||||    
T  41172984 tcaagtaggtcatttatttagggacggagggagta 41173018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 38 - 175
Target Start/End: Original strand, 16941938 - 16942075
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  16941938 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaatatatcaaagataaaacatatgcattggtatgtgtgtcagag 16942037  T
Q  138 tcaactaggtcatttatttagagacggagggagtacta 175  Q
    |||||||| |||||||||||| |||||||| |||||||    
T  16942038 tcaactagatcatttatttagcgacggaggaagtacta 16942075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 38 - 175
Target Start/End: Original strand, 17012603 - 17012740
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  17012603 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaatatatcaaagataaaacatatgcattggtatgtgtgtcagag 17012702  T
Q  138 tcaactaggtcatttatttagagacggagggagtacta 175  Q
    |||||||| |||||||||||| |||||||| |||||||    
T  17012703 tcaactagatcatttatttagcgacggaggaagtacta 17012740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 38 - 178
Target Start/End: Complemental strand, 44330518 - 44330378
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||| ||||        |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  44330518 ctcgatgagtatttttaaaatattaaattttgataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 44330419  T
Q  138 tcaactaggtcatttatttagagacggagggagtactattt 178  Q
    ||||||||||||||||||||   ||||| |||||| |||||    
T  44330418 tcaactaggtcatttatttaagaacggaaggagtagtattt 44330378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 4045360 - 4045494
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  4045360 ctcgatgaatatttttaaaatattaaatttttataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 4045459  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||| |  |||||||||||| |||||||||||||    
T  4045460 tcaaccaaatcatttatttagggacggagggagta 4045494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 40425376 - 40425510
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||| |||||||||||||||||||| ||||||||        | |||||||||||||||||||| |||||||||||||||||| |||||||||||||     
T  40425376 ctcgataagtatttttaaaatattaaaattttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagaa 40425475  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||||| |||||||||||||    
T  40425476 tcaactaggtcatttatttagggacggagggagta 40425510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 38 - 174
Target Start/End: Original strand, 7443018 - 7443154
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| || |||||||||||    
T  7443018 ctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagag 7443117  T
Q  138 tcaactaggtcatttatttagagacggagggagtact 174  Q
    |||||||||||| ||||| || |||||||||||||||    
T  7443118 tcaactaggtcacttattcagggacggagggagtact 7443154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 30708862 - 30708728
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| || |||||||| ||    
T  30708862 ctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcaaag 30708763  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||| ||||| ||||||||||||||||    
T  30708762 tcaactaggtcacttattcagagacggagggagta 30708728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 44283406 - 44283540
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||| | |||||||||||||||||||||||||||        | |||||||||||||||||||| ||||||| |||||||||| |||||||||||||     
T  44283406 ctcgataaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaatatatgcattggtatgtgtgtcagaa 44283505  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||||  |||||||||||||    
T  44283506 tcaactaggtcatttatttaaggacggagggagta 44283540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 36199078 - 36199197
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||| ||||||||||| |||||||||||||||||  ||||||||||||||    
T  36199078 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaatcgaagatatcaaagataaaacatatgcattagtatgtgtgtcagag 36199177  T
Q  138 tcaactaggtcatttattta 157  Q
    |||||||| |||||||||||    
T  36199178 tcaactagatcatttattta 36199197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 47 - 178
Target Start/End: Original strand, 41463653 - 41463784
Alignment:
Q  47 tatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactagg 146  Q
    |||||||||||||||||||||| ||||        | |||||||||||||||||||| |||||||||||||||||| || ||||||| ||||||||||||    
T  41463653 tatttttaaaatattaaattttcataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaactagg 41463752  T
Q  147 tcatttatttagagacggagggagtactattt 178  Q
    ||||||||| || |||||||||||| ||||||    
T  41463753 tcatttattgagggacggagggagtgctattt 41463784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 9877210 - 9877344
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||| ||||||||||||||||||||||        | ||||||||| |||||||||| ||||||||||||||||| | | |||||||||||    
T  9877210 ctcgatgaatattgttaaaatattaaatttttataatattttttagtagagaattaaagatatcaaagataaaacatatgcattcacacgtgtgtcagag 9877309  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||| |||| || |||||||||||||    
T  9877310 tcaactaggtcatctattgagggacggagggagta 9877344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 32776027 - 32776161
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||| ||||          |||||||||||||||||||| |||||||||||||||||| || |||| || |||    
T  32776027 ctcgatgaatatttttaaaatattaaattttcataatttatttttgtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtatcggag 32776126  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||| |||| || |||||||||||||    
T  32776127 tcaactaggtcatctattaagggacggagggagta 32776161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 38588072 - 38588143
Alignment:
Q  94 aagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagagacgga 165  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||||||||| |||||||||||| ||||||    
T  38588072 aagatatcaaagataaaacatatgcattggtatgtgtatcagagtcaactagatcatttatttagggacgga 38588143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 40598263 - 40598128
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnn-aatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcaga 136  Q
    |||||||| ||||||||||||||||| |||| ||||         |||||||||||||||||||||| |||||||||||||||||| || |||||||  |    
T  40598263 ctcgatgaatatttttaaaatattaagttttcataatttttttttaatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaa 40598164  T
Q  137 gtcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||| ||||||| |  | |||||||||||||    
T  40598163 gtcaactagatcatttaatatgggacggagggagta 40598128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 38963653 - 38963519
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||| ||||          |||||||||||||| ||||| |||||||||||||||||| || |||||||  ||    
T  38963653 ctcgatgaatatttttaaaatattaaattttcataatttttttttgtagagaattgaagaaatcaaagataaaacatatgcattggtacgtgtgtcgaag 38963554  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    | ||||||||||| |||| ||  ||||||||||||    
T  38963553 ttaactaggtcatctattaaggaacggagggagta 38963519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 38 - 122
Target Start/End: Original strand, 30776320 - 30776404
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattg 122  Q
    |||||||| |||||||||||||||||||||||||||        | |||||||||||||||||||| ||||||||||||||||||    
T  30776320 ctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattg 30776404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 150
Target Start/End: Complemental strand, 4083292 - 4083229
Alignment:
Q  87 agaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcat 150  Q
    |||||| ||||||| || ||||||||||||||||||||||||||||| ||||||||||| ||||    
T  4083292 agaattaaagatattaaagataaaacatatgcattgatatgtgtgtcggagtcaactagctcat 4083229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 144
Target Start/End: Complemental strand, 4045984 - 4045878
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | |||| |||| |||||||||| |||||||||||||||||  || || |||||||     
T  4045984 ctcgatgaatatttttaaaatattaaatttttataattttttttagtagaaaattaaagatatcaaagataaaacatatgcattagtacgtatgtcagaa 4045885  T
Q  138 tcaacta 144  Q
    |||||||    
T  4045884 tcaacta 4045878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 8794010 - 8794050
Alignment:
Q  171 tactatttcaacttactgaaactagcatatatgttggattt 211  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  8794010 tactatttcaacttactgaaactagcatatatgttggattt 8794050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 150
Target Start/End: Original strand, 39418147 - 39418259
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||| ||||        | |||| ||||||||||||||| ||||||| ||||| |||| || |||||||  ||    
T  39418147 ctcgatgaatatttttaaaatattaaattttcataattttttttagtagataattgaagatatcaaagataaaatatatgtattggtaagtgtgtcgaag 39418246  T
Q  138 tcaactaggtcat 150  Q
    |||||||| ||||    
T  39418247 tcaactagatcat 39418259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 38137707 - 38137769
Alignment:
Q  88 gaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcat 150  Q
    |||||||||||||||| |||||||||||||||||  || ||||||| ||||||||||| ||||    
T  38137707 gaattgaagatatcaaagataaaacatatgcatttgtacgtgtgtcggagtcaactagatcat 38137769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 40898728 - 40898662
Alignment:
Q  84 tagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcat 150  Q
    |||||||||||||||||||| |||||||||||| ||||  || ||||||| ||||||||||| ||||    
T  40898728 tagagaattgaagatatcaaagataaaacatatacattagtacgtgtgtcggagtcaactagatcat 40898662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 332411 - 332278
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaa-tagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcaga 136  Q
    |||||||| |||||||||||||||||||||| ||||         | |||||||||||||||||||| |||||||||||||| ||| ||   ||||| ||    
T  332411 ctcgatgaatatttttaaaatattaaattttcataatttttttttagtagagaattgaagatatcaaagataaaacatatgcgttggta--cgtgtcgga 332314  T
Q  137 gtcaactaggtcatttatttagagacggagggagta 172  Q
    ||||| |||||||| || |  | |||||||||||||    
T  332313 gtcaaataggtcatctaatatgggacggagggagta 332278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 150
Target Start/End: Complemental strand, 42951474 - 42951362
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||| ||| |||||||||||||||||||||| ||||        | || ||||| ||| |||||||  ||||||||||| |||||||| ||||||| |||    
T  42951474 ctcgttgaatatttttaaaatattaaattttcataatttttattagtaaagaatagaaaatatcaaaaataaaacatatacattgatacgtgtgtcggag 42951375  T
Q  138 tcaactaggtcat 150  Q
    |||||||| ||||    
T  42951374 tcaactagatcat 42951362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 155
Target Start/End: Original strand, 24283131 - 24283202
Alignment:
Q  84 tagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatt 155  Q
    |||||||||||||||||||| ||||||||||||||||   || ||||||| ||  |||||||||||| ||||    
T  24283131 tagagaattgaagatatcaaagataaaacatatgcatcagtacgtgtgtcggaaacaactaggtcatctatt 24283202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 121
Target Start/End: Original strand, 43925252 - 43925291
Alignment:
Q  82 aatagagaattgaagatatcaatgataaaacatatgcatt 121  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  43925252 aatagagaattgaagatatcaaagataaaacatatgcatt 43925291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 155
Target Start/End: Original strand, 5030465 - 5030515
Alignment:
Q  105 gataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatt 155  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||| ||||    
T  5030465 gataaaaaatatgcattggtatgtgtgtcaaagtcaactaggtcatctatt 5030515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 178
Target Start/End: Complemental strand, 25786653 - 25786556
Alignment:
Q  82 aatagagaattgaagatatcaatgataaaaca-tatgcattgatatgtgtgtcagagtcaactaggtcatttatttagagacggagggagtactattt 178  Q
    ||||||||||||||||||| || ||||||| | ||||||||| |||||| | |||||||||||  |||||||| |  |||||| | |||||| |||||    
T  25786653 aatagagaattgaagatattaaggataaaaaaatatgcattggtatgtgggacagagtcaactgtgtcatttaatatgagacgaatggagtattattt 25786556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 13399278 - 13399344
Alignment:
Q  84 tagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcat 150  Q
    ||||||||||||||||| ||  ||||||| ||||||||| ||  ||| ||||||||||||| |||||    
T  13399278 tagagaattgaagatataaaaaataaaacgtatgcattggtacatgtatcagagtcaactaagtcat 13399344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 8924672 - 8924640
Alignment:
Q  41 gatgagtatttttaaaatattaaatttttataa 73  Q
    |||||||||||||||||||| ||||||||||||    
T  8924672 gatgagtatttttaaaatatcaaatttttataa 8924640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 173
Target Start/End: Complemental strand, 40425284 - 40425248
Alignment:
Q  137 gtcaactaggtcatttatttagagacggagggagtac 173  Q
    ||||||||||||||||||| || ||||||||||||||    
T  40425284 gtcaactaggtcatttattaagggacggagggagtac 40425248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 1e-46; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 36819830 - 36819696
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  36819830 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 36819731  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||||| |||||||||||||    
T  36819730 tcaactaggtcatttatttagggacggagggagta 36819696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 38 - 174
Target Start/End: Original strand, 42086765 - 42086901
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  42086765 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 42086864  T
Q  138 tcaactaggtcatttatttagagacggagggagtact 174  Q
    ||||||||||||||||||||| || ||||||||||||    
T  42086865 tcaactaggtcatttatttagggatggagggagtact 42086901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 19072903 - 19072769
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| |||||||||||||     
T  19072903 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagaa 19072804  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||||| |||||||||||||    
T  19072803 tcaactaggtcatttatttagggacggagggagta 19072769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 32619069 - 32619203
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | ||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  32619069 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaaaataaaacatatgcattgatatgtgtgtcagag 32619168  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||| ||||||||||||| |||||||||||||    
T  32619169 tcaactaagtcatttatttagggacggagggagta 32619203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 2400419 - 2400285
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||| ||||||||||| |||||||||||||||||| ||| ||||||||||    
T  2400419 ctcgatgagtatttttaaaatattaaatttttataatattttttagtagagaatggaagatatcaaagataaaacatatgcattggtatatgtgtcagag 2400320  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||||| |||||||||||||    
T  2400319 tcaactaggtcatttatttagggacggagggagta 2400285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 28185535 - 28185669
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | ||||||||| |||||||||| ||||||||||||| |||| ||||||||||||||    
T  28185535 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattaaagatatcaaagataaaacatatgtattggtatgtgtgtcagag 28185634  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||||| |||||||||||||    
T  28185635 tcaactaggtcatttatttagggacggagggagta 28185669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 37951072 - 37951206
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| |||||| |||||||    
T  37951072 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgcgtcagag 37951171  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||||  |||||||||||||    
T  37951172 tcaactaggtcatttatttatggacggagggagta 37951206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 47081114 - 47080980
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | ||||||||| |||||||||| |||||||||||||||||| ||||||||||||||    
T  47081114 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaatttaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 47081015  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||||| |||||| |||||||||||||    
T  47081014 tcaactaggtcattcatttagggacggagggagta 47080980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 38 - 173
Target Start/End: Original strand, 47713629 - 47713764
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||| ||||||||||||||||||||||||||||        | |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  47713629 ctcgatgggtatttttaaaatattaaatttttataattttttttagtagaaaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 47713728  T
Q  138 tcaactaggtcatttatttagagacggagggagtac 173  Q
    |||||||||||| |||||||| ||||||||||||||    
T  47713729 tcaactaggtcacttatttagggacggagggagtac 47713764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 36859335 - 36859469
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  36859335 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgttagag 36859434  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||| ||||||||||||||||  ||||||||||||    
T  36859435 tcaattaggtcatttatttaggaacggagggagta 36859469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 36905660 - 36905526
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  36905660 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgtattggtatgtgtgtcagag 36905561  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||  |||||||||||| |||||||||||||    
T  36905560 tcaactaaatcatttatttagggacggagggagta 36905526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 40 - 172
Target Start/End: Original strand, 23474098 - 23474230
Alignment:
Q  40 cgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtc 139  Q
    |||||| |||||||||||||||||||||||||||        | |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  23474098 cgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattgatacgtgtgtcagagtc 23474197  T
Q  140 aactaggtcatttatttagagacggagggagta 172  Q
    |||||||||| |||||||| |||||| ||||||    
T  23474198 aactaggtcacttatttagggacggaaggagta 23474230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 31466485 - 31466619
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | || ||||||||||||||||| |||||||||||||||||| || |||||||||||    
T  31466485 ctcgatgaatatttttaaaatattaaatttttataattttttttagtatagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagag 31466584  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||| |||||||| |||||||||||||    
T  31466585 tcaactaggtcacttatttagggacggagggagta 31466619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 4612214 - 4612348
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        |||| |||||||||||||||||  |||||| |||||||||| ||| ||||||||||    
T  4612214 ctcgatgagtatttttaaaatattaaatttttataattttttttaataaagaattgaagatatcaaacataaaatatatgcattggtatttgtgtcagag 4612313  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||| |||||||||||||| |||| ||||||||    
T  4612314 tcaactgggtcatttatttagggacgtagggagta 4612348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 38 - 171
Target Start/End: Complemental strand, 31110756 - 31110625
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | |||||||||||| ||||||| ||||||||||||||||||| ||||||  |||||    
T  31110756 ctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaaaatatcaaagataaaacatatgcattgagatgtgt--cagag 31110659  T
Q  138 tcaactaggtcatttatttagagacggagggagt 171  Q
    ||||||||||||||||||||| ||||||||||||    
T  31110658 tcaactaggtcatttatttagggacggagggagt 31110625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 42834419 - 42834553
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | || ||||||||||||||||| |||||||||||| ||||| ||||||| ||| ||    
T  42834419 ctcgatgaatatttttaaaatattaaatttttataattttttttagtaaagaattgaagatatcaaagataaaacatatacattggtatgtgtatcaaag 42834518  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||| ||||||||||||||||||||||||||||||    
T  42834519 tcaaataggtcatttatttagagacggagggagta 42834553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 44479848 - 44479981
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||          | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  44479848 ctcgatgagtatttttaaaatattaaatttttatt-tttttttaagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 44479946  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||| |||||||| |||||||| ||||    
T  44479947 tcaactaggtcacttatttagggacggaggaagta 44479981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 38 - 173
Target Start/End: Complemental strand, 21392152 - 21392017
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | ||||||||| |||||||||| |||||||||||||||||| || |||||||||||    
T  21392152 ctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattaaagatatcaaagataaaacatatgcattggtacgtgtgtcagag 21392053  T
Q  138 tcaactaggtcatttatttagagacggagggagtac 173  Q
    |||||||| |||| |||| |  ||| ||||||||||    
T  21392052 tcaactagatcatctattgaaggacagagggagtac 21392017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 144
Target Start/End: Complemental strand, 48531456 - 48531350
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | |||||||||||||||||||| ||||||| ||||||||||||| |||||||||||    
T  48531456 ctcgatgaatatttttaaaatattaaatttttataatattttttagtagagaattgaagatatcaaagataaaatatatgcattgatacgtgtgtcagag 48531357  T
Q  138 tcaacta 144  Q
    |||||||    
T  48531356 tcaacta 48531350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 10464242 - 10464376
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| ||||||||||||||||| |||| ||||        |||||||||||||||||||||| |||||||||||||||||| || |||||||| ||    
T  10464242 ctcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcaaag 10464341  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||  ||||||| |  | |||||||||||||    
T  10464342 tcaactatatcatttaatatgggacggagggagta 10464376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 47713774 - 47713841
Alignment:
Q  106 ataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagagacggagggagtac 173  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  47713774 ataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacggagggagtac 47713841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 34478138 - 34478272
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| ||||||||||||||||| |||| ||||        | |||||||||||||||||||| |||||||||||||||||| || |||||||  ||    
T  34478138 ctcgatgaatatttttaaaatattaagttttcataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaag 34478237  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||| ||||| |  | |||||||||||||    
T  34478238 tcaactaggttatttaatatgggacggagggagta 34478272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 35500874 - 35501008
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| ||||||||||||||||| |||| ||||        |||||||||||||||||||||| |||||||||||||||||| || |||||||  ||    
T  35500874 ctcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaag 35500973  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    | |||||| ||||||| |  | |||||||||||||    
T  35500974 ttaactagatcatttaatatgggacggagggagta 35501008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 38 - 155
Target Start/End: Complemental strand, 47538057 - 47537940
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| || || | |||||     
T  47538057 ctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtatatcagaa 47537958  T
Q  138 tcaactaggtcatttatt 155  Q
    |||| ||| |||||||||    
T  47537957 tcaattagatcatttatt 47537940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 37231690 - 37231825
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnn-aatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcaga 136  Q
    |||||||| ||||||||||||||||| |||| ||||         |||||||||||||||||||||| |||||||||||||||||| || |||||||  |    
T  37231690 ctcgatgaatatttttaaaatattaagttttcataatttttttttaatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaa 37231789  T
Q  137 gtcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||| ||||||| |  | |||||||||||||    
T  37231790 gtcaactagatcatttaatatgggacggagggagta 37231825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 38 - 138
Target Start/End: Original strand, 39982241 - 39982341
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| ||||||||||||||||||||||||||         ||||||||||||||||||| || |||||||||||||||||  |||||||| |||||    
T  39982241 ctcgatgaatatttttaaaatattaaatttttatatatttttctaatagagaattgaagatattaaagataaaacatatgcattattatgtgtgacagag 39982340  T
Q  138 t 138  Q
    |    
T  39982341 t 39982341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 36643296 - 36643181
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||| | ||||||||||||||||| |||| ||||        |||||||||||||||||||||| |||||||||||||||||| || |||||||  ||    
T  36643296 ctcgataaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaag 36643197  T
Q  138 tcaactaggtcattta 153  Q
    |||| ||| |||||||    
T  36643196 tcaattagatcattta 36643181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 38 - 147
Target Start/End: Original strand, 31497831 - 31497939
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||| ||||        | |||| ||||||||||||||| ||||||||||||| |||  |||||||||| |||    
T  31497831 ctcgatgaatatttttaaaatattaaattttcataactttttt-agtagataattgaagatatcaaagataaaacatatgtattagtatgtgtgtcggag 31497929  T
Q  138 tcaactaggt 147  Q
    ||||||||||    
T  31497930 tcaactaggt 31497939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 41 - 150
Target Start/End: Complemental strand, 4033422 - 4033313
Alignment:
Q  41 gatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtca 140  Q
    ||||| |||||| |||||| |||||||| ||||        |||||| |||| || |||| || ||||||| ||||||||||||||||||||||||||||    
T  4033422 gatgaatattttcaaaatactaaattttcataatttttttaaatagataattaaatatattaaagataaaaaatatgcattgatatgtgtgtcagagtca 4033323  T
Q  141 actaggtcat 150  Q
    ||||| ||||    
T  4033322 actagatcat 4033313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 150
Target Start/End: Complemental strand, 38198615 - 38198503
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||| | ||||||| |||||||||||||| ||||        |||| | |||| || |||| || ||||||| |||||||||||||||||| ||||||    
T  38198615 ctcgattaatatttttcaaatattaaattttcataattttttcaaatacataattaaatatattaaagataaaaaatatgcattgatatgtgtatcagag 38198516  T
Q  138 tcaactaggtcat 150  Q
    |||||||||||||    
T  38198515 tcaactaggtcat 38198503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 153
Target Start/End: Original strand, 42493801 - 42493872
Alignment:
Q  82 aatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcattta 153  Q
    |||| |||||| ||||||| || ||||||| |||| |||||||||||||| |||||||||||  ||||||||    
T  42493801 aatatagaattaaagatattaaagataaaaaatatacattgatatgtgtgacagagtcaactgtgtcattta 42493872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 172
Target Start/End: Complemental strand, 2450779 - 2450689
Alignment:
Q  82 aatagagaattgaagatatcaatgat-aaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||| || ||| ||||||||||||||| ||   ||||| |||| ||||||||| || || || ||||||||||||||    
T  2450779 aatagagaattgaagatattaaagataaaaacatatgcattggtacaggtgtcggagtaaactaggtctttaatata-agacggagggagta 2450689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 150
Target Start/End: Complemental strand, 33613281 - 33613238
Alignment:
Q  107 taaaacatatgcattgatatgtgtgtcagagtcaactaggtcat 150  Q
    |||||||||||||||| |||| ||||| ||||||||||||||||    
T  33613281 taaaacatatgcattggtatgcgtgtcggagtcaactaggtcat 33613238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 40348500 - 40348438
Alignment:
Q  82 aatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaacta 144  Q
    |||||| |||| || |||| || ||||||| ||||||||||||||| ||||| ||||||||||    
T  40348500 aatagataattaaatatattaaagataaaaaatatgcattgatatgagtgtctgagtcaacta 40348438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 34478043 - 34478002
Alignment:
Q  137 gtcaactaggtcatttatttagagacggagggagtactattt 178  Q
    ||||||||||||||||||| || ||||||||||||| |||||    
T  34478043 gtcaactaggtcatttattgagggacggagggagtaatattt 34478002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 149
Target Start/End: Original strand, 3680530 - 3680574
Alignment:
Q  105 gataaaacatatgcattgatatgtgtgtcagagtcaactaggtca 149  Q
    |||||||||||||||||||||||||||  ||| ||||||| ||||    
T  3680530 gataaaacatatgcattgatatgtgtgatagaatcaactatgtca 3680574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 1e-46; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 18659186 - 18659052
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  18659186 ctcgatgagtatttttaaaatattaaatttttataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 18659087  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||| |||||||||||| |||||||||||||    
T  18659086 tcaactagatcatttatttagggacggagggagta 18659052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 38 - 177
Target Start/End: Original strand, 7459947 - 7460086
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  7459947 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 7460046  T
Q  138 tcaactaggtcatttatttagagacggagggagtactatt 177  Q
    ||||||||||||||||||||| |||||||| |||| ||||    
T  7460047 tcaactaggtcatttatttagggacggaggaagtagtatt 7460086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 54840255 - 54840389
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        |||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  54840255 ctcgatgagtatttttaaaatattaaatttttataattttttttaataaagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 54840354  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||||| || ||||||||||    
T  54840355 tcaactaggtcatttatttagggatggagggagta 54840389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 8559132 - 8559266
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | ||||||||||||||||| || |||||||||||||||||| ||||||||||||||    
T  8559132 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatattaaagataaaacatatgcattggtatgtgtgtcagag 8559231  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||||| |||||| ||||||    
T  8559232 tcaactaggtcatttatttagggacggatggagta 8559266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 37833034 - 37832900
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | ||||||||||||||||||||  ||||||||||||||||| ||||||||||||||    
T  37833034 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaaaataaaacatatgcattggtatgtgtgtcagag 37832935  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||| ||||||||||||| |||||||||||||    
T  37832934 tcaactatgtcatttatttagggacggagggagta 37832900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 43137985 - 43137851
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  43137985 ctcgatgagtatttttaaaatattaaatttttataattatttttagtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagag 43137886  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||| |||||||||||| |||||||||||||    
T  43137885 tcaactagatcatttatttagggacggagggagta 43137851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 21907130 - 21906996
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  21907130 ctcgatgagtatttttaaaatattaaatttttataattttttttactagataattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 21907031  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||| ||||||||| || |||||||||||||    
T  21907030 tcaactagatcatttattgagggacggagggagta 21906996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 38 - 169
Target Start/End: Original strand, 10571271 - 10571402
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  10571271 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgtattggtatgtgtgtcagag 10571370  T
Q  138 tcaactaggtcatttatttagagacggaggga 169  Q
    |||||||||||||||||  || ||||||||||    
T  10571371 tcaactaggtcatttatcgagggacggaggga 10571402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 45167433 - 45167314
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||| ||||||||||||||||||||        |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  45167433 ctcgatgattattttaaaaatattaaatttttataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 45167334  T
Q  138 tcaactaggtcatttattta 157  Q
    ||||||||||||||||||||    
T  45167333 tcaactaggtcatttattta 45167314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 1327446 - 1327311
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaa-tagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcaga 136  Q
    ||||||||||||||||||||||||||||||||||||         | |||||||||||||||||||| |||||||||||||||||| ||||| ||| |||    
T  1327446 ctcgatgagtatttttaaaatattaaatttttataatttttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtaaga 1327347  T
Q  137 gtcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||| |||||||||||| |||||||||||||    
T  1327346 gtcaactagatcatttatttagggacggagggagta 1327311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 38 - 178
Target Start/End: Complemental strand, 38492185 - 38492046
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | ||||||||||||||||| || |||||||||||||||||| || |||||||||||    
T  38492185 ctcgatgaatatttttaaaatattaaatttttataattttttt-agtagagaattgaagatattaaagataaaacatatgcattggtacgtgtgtcagag 38492087  T
Q  138 tcaactaggtcatttatttagagacggagggagtactattt 178  Q
    |||||||||||| ||||| || |||||||||||||||||||    
T  38492086 tcaactaggtcacttattcagggacggagggagtactattt 38492046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 38 - 165
Target Start/End: Complemental strand, 38833797 - 38833671
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||||||||||||||||||||||||||||||         | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  38833797 ctcgatgagtatttttaaaatattaaatttttata-ttttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 38833699  T
Q  138 tcaactaggtcatttatttagagacgga 165  Q
    |||||||||||| |||||||| ||||||    
T  38833698 tcaactaggtcacttatttagggacgga 38833671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 42 - 163
Target Start/End: Complemental strand, 51062520 - 51062399
Alignment:
Q  42 atgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaa 141  Q
    |||||||||||||||||||||||||||||||         | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  51062520 atgagtatttttaaaatattaaatttttatatttttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaa 51062421  T
Q  142 ctaggtcatttatttagagacg 163  Q
    |||||||| |||||||| ||||    
T  51062420 ctaggtcacttatttagggacg 51062399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 174
Target Start/End: Original strand, 52668617 - 52668748
Alignment:
Q  42 atgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaa 141  Q
    ||||||||||||||| ||||||||||||||||        | | |||||||||| ||||||| ||||||| ||||||||||||||||||||||||| |||    
T  52668617 atgagtatttttaaa-tattaaatttttataattttttttagtggagaattgaaaatatcaaagataaaatatatgcattgatatgtgtgtcagagccaa 52668715  T
Q  142 ctaggtcatttatttagagacggagggagtact 174  Q
    ||||||||||||||||| |||||||||||||||    
T  52668716 ctaggtcatttatttagggacggagggagtact 52668748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 29728225 - 29728359
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | |||| ||||||||||||| | |||||||||||||||||| ||  ||||||||||    
T  29728225 ctcgatgaatatttttaaaatattaaatttttataattttttttagtagaaaattgaagatatctaagataaaacatatgcattggtacttgtgtcagag 29728324  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||||||||| || |||||||||||||    
T  29728325 tcaactaggtcatttattgagggacggagggagta 29728359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 51392430 - 51392548
Alignment:
Q  49 tttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtc 148  Q
    |||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||    
T  51392430 tttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtaagagtcaactaggtc 51392529  T
Q  149 atttatttagagacggagg 167  Q
    |||||||||| ||| ||||    
T  51392530 atttatttagggacagagg 51392548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 25097314 - 25097448
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| || |||||| ||||    
T  25097314 ctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgttagag 25097413  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||| ||||| |||| ||  ||||||||||||    
T  25097414 tcaactaagtcatctattgaggtacggagggagta 25097448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 48706971 - 48707104
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||||||||||||||||||||||||||||||         | |||||||||||||||||||| |||||||||||||||||| ||||| |||||||     
T  48706971 ctcgatgagtatttttaaaatattaaatttttata-ttttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcagaa 48707069  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||  ||| |||||||| |||||||||||||    
T  48707070 tcaactaaatcacttatttagggacggagggagta 48707104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 27849085 - 27848952
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||| ||||| ||    
T  27849085 ctcgatgaatatttttaaaatattaaatttttataattttttt-agtagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcaaag 27848987  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||| || | || |||||||||||||    
T  27848986 tcaactaggtcatctaatgagggacggagggagta 27848952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 46483684 - 46483551
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||| ||||||||        | |||||||||||||||||||| |||||||||||||||||| || |||||||||||    
T  46483684 ctcgatgaatatttttaaaatattaaaattttataattttttt-agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagag 46483586  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||| |||| || |||||| ||||||    
T  46483585 tcaactaggtcatctattgagggacggatggagta 46483551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 34827409 - 34827322
Alignment:
Q  85 agagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||| ||||| || |||||||||||||    
T  34827409 agagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcacttattcagggacggagggagta 34827322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 17052998 - 17052864
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||| ||||        |||||| ||||||||||||||| |||||||||||||||||| || |||||||  ||    
T  17052998 ctcgatgaatatttttaaaatattaaattttcataattttttttaatagaaaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaag 17052899  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||| ||||||| |  |||||||||||||||    
T  17052898 tcaactagatcatttaatatgagacggagggagta 17052864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 172
Target Start/End: Complemental strand, 53066504 - 53066375
Alignment:
Q  42 atgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaa 141  Q
    |||| |||||||||| ||||||||||||||||        |||||| ||||||||||||||| |||||||||||||||||| || |||||||||||||||    
T  53066504 atgaatatttttaaactattaaatttttataattttttttaatagataattgaagatatcaaagataaaacatatgcattggtaagtgtgtcagagtcaa 53066405  T
Q  142 ctaggtcatttatttagagacggagggagta 172  Q
    ||| ||||| |||| || |||||||||||||    
T  53066404 cta-gtcatctattgagggacggagggagta 53066375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 39 - 172
Target Start/End: Complemental strand, 49057989 - 49057856
Alignment:
Q  39 tcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagt 138  Q
    ||||||| |||||||||||||||||||||| ||||          |||||||||||||||||||| |||||||||||||||||| || |||||||  |||    
T  49057989 tcgatgaatatttttaaaatattaaattttcataattttttttggtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagt 49057890  T
Q  139 caactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||| || |||||||| ||||    
T  49057889 caactaggtcatttattgagggacggaggaagta 49057856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 38 - 148
Target Start/End: Original strand, 32285303 - 32285413
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| ||||||||||||||||||| |||||||        | |||||||||||||||||||| ||||||||||||| |||| || |||||||||||    
T  32285303 ctcgatgaatatttttaaaatattaaatctttataagtttttttagtagagaattgaagatatcaaagataaaacatatgtattggtacgtgtgtcagag 32285402  T
Q  138 tcaactaggtc 148  Q
    |||||||||||    
T  32285403 tcaactaggtc 32285413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 32951263 - 32951397
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| ||||||||||||||||| |||| ||||        |||||||||||||||||| ||| |||||||||||||||||| ||||||||||  ||    
T  32951263 ctcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagataccaaagataaaacatatgcattggtatgtgtgtcgaag 32951362  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||| ||||||| |  | |||||||||||||    
T  32951363 tcaactagatcatttaatatgggacggagggagta 32951397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 172
Target Start/End: Complemental strand, 28690649 - 28690516
Alignment:
Q  39 tcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagt 138  Q
    ||||||| ||||||| ||| |||||||||| ||||        | ||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||    
T  28690649 tcgatgaatattttttaaaaattaaattttcataattttttttagtagagcattgaagatatcaaagataaaacatatgcattggtatgtgtgtcggagt 28690550  T
Q  139 caactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||| || |  | |||||||||||||    
T  28690549 caactaggtcatctaatatgtgacggagggagta 28690516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 38 - 167
Target Start/End: Complemental strand, 47638189 - 47638060
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | ||||||||||||||||| || |||||||||||||||||| || |||| |||||     
T  47638189 ctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatattaaagataaaacatatgcattggtacgtgtatcagaa 47638090  T
Q  138 tcaactaggtcatttatttagagacggagg 167  Q
    |||| || ||||| |||| || ||||||||    
T  47638089 tcaattaagtcatctattgagtgacggagg 47638060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 38 - 150
Target Start/End: Complemental strand, 10437416 - 10437304
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | || ||||||||||||||||| ||||||||||||  |||| || |||||||||||    
T  10437416 ctcgatgaatatttttaaaatattaaatttttataagtttttttagtaaagaattgaagatatcaaagataaaacatataaattggtacgtgtgtcagag 10437317  T
Q  138 tcaactaggtcat 150  Q
    ||||||| |||||    
T  10437316 tcaactaagtcat 10437304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 84 - 172
Target Start/End: Complemental strand, 15503113 - 15503025
Alignment:
Q  84 tagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||| ||||||| ||||||||||||||||||||| || |||| ||||||| |||||||| |||| || |||||||||||||    
T  15503113 tagagaattgaatatatcaaagataaaacatatgcattgatacgtatgtcggagtcaattaggtcatctattgagggacggagggagta 15503025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 153
Target Start/End: Original strand, 4238747 - 4238862
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| ||||||||||||||||| |||| ||||        ||||||||||||||||||| || |||||||||||||||||| || |||||||  ||    
T  4238747 ctcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatattaaagataaaacatatgcattggtacgtgtgtcgaag 4238846  T
Q  138 tcaactaggtcattta 153  Q
    |||||||| |||||||    
T  4238847 tcaactagatcattta 4238862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 173
Target Start/End: Original strand, 7671440 - 7671575
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||| ||||| ||||        | |||||||||||||||||||| |||||||||||||||||||||  || ||| ||     
T  7671440 ctcgatgaatatttttaaaatattatattttcataattttttttagtagagaattgaagatatcaaagataaaacatatgcattgatacatgcgtctgaa 7671539  T
Q  138 tcaactaggtcatttatttagagacggagggagtac 173  Q
    ||||||||||||| || |  |||||||| |||||||    
T  7671540 tcaactaggtcatctaatatgagacggacggagtac 7671575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 10435268 - 10435153
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| ||||||||||||||||| |||| ||||        ||||||||||||||||||| || |||||||||||||||||| || |||||||  ||    
T  10435268 ctcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatattaaagataaaacatatgcattggtacgtgtgtcgaag 10435169  T
Q  138 tcaactaggtcattta 153  Q
    |||||||| |||||||    
T  10435168 tcaactagatcattta 10435153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 38 - 144
Target Start/End: Original strand, 35717982 - 35718088
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| || ||||||||||||||||||| ||||        | |||| ||||||||||||||| |||||||||||||||||| || |||||||||||    
T  35717982 ctcgatgaatacttttaaaatattaaattttcataatattttttagtagaaaattgaagatatcaaggataaaacatatgcattggtacgtgtgtcagag 35718081  T
Q  138 tcaacta 144  Q
    |||||||    
T  35718082 tcaacta 35718088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 3547548 - 3547681
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||| ||||        | |||| ||||||||||||||| |||||||||||||||||| || ||||||| |||    
T  3547548 ctcgatgaatatttttaaaatattaaattttcataattttttt-agtagataattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggag 3547646  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||| |||||||| || |  | |||||||||||||    
T  3547647 tcaattaggtcatctaatatgggacggagggagta 3547681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 38 - 150
Target Start/End: Complemental strand, 9145636 - 9145524
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| ||||||||||||||||||| || ||||        | |||| |||| |||||||||| |||||||||||||||||| || ||||||| |||    
T  9145636 ctcgatgaatatttttaaaatattaaatcttcataattttttttagtagaaaattcaagatatcaaagataaaacatatgcattggtacgtgtgtcggag 9145537  T
Q  138 tcaactaggtcat 150  Q
    |||||||||||||    
T  9145536 tcaactaggtcat 9145524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 144
Target Start/End: Complemental strand, 45093807 - 45093748
Alignment:
Q  85 agagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaacta 144  Q
    ||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||    
T  45093807 agagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaacta 45093748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 38 - 150
Target Start/End: Complemental strand, 36665152 - 36665041
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||| ||||| ||||        ||||||||| |||||||||||| |||||||||||||||||| || |||| || |||    
T  36665152 ctcgatgaatatttttaaaatattatattttcataattttttt-aatagagaaatgaagatatcaaagataaaacatatgcattggtacgtgtatcggag 36665054  T
Q  138 tcaactaggtcat 150  Q
    |||| || |||||    
T  36665053 tcaattaagtcat 36665041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 172
Target Start/End: Original strand, 39435171 - 39435296
Alignment:
Q  47 tatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactagg 146  Q
    |||||| ||||||||||||||| ||||        |||||| |||| || |||| |  ||||||| ||||| |||| ||| ||||||||| |||||||||    
T  39435171 tattttcaaaatattaaattttcataattttttaaaatagataattaaaaatattacagataaaaaatatgtattggtatatgtgtcagaatcaactagg 39435270  T
Q  147 tcatttatttagagacggagggagta 172  Q
    |||| || | || |||||||||||||    
T  39435271 tcatctaataagggacggagggagta 39435296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 3817850 - 3817885
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataa 73  Q
    ||||||||||||||| ||||||||||||||||||||    
T  3817850 ctcgatgagtattttaaaaatattaaatttttataa 3817885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 153
Target Start/End: Complemental strand, 48143849 - 48143784
Alignment:
Q  87 agaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcattta 153  Q
    ||||||||| ||||||| |||||| |||||| |||| |||| ||||| ||||||||||| |||||||    
T  48143849 agaattgaa-atatcaaagataaaccatatgtattggtatgagtgtcggagtcaactagatcattta 48143784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 143
Target Start/End: Original strand, 9794346 - 9794407
Alignment:
Q  82 aatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaact 143  Q
    |||||| |||||||||||| || |||||||  ||| ||||||||||||||  ||||||||||    
T  9794346 aatagataattgaagatattaaagataaaaattattcattgatatgtgtgatagagtcaact 9794407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 173
Target Start/End: Complemental strand, 7459855 - 7459819
Alignment:
Q  137 gtcaactaggtcatttatttagagacggagggagtac 173  Q
    ||||||||||||||||||| || ||||||||||||||    
T  7459855 gtcaactaggtcatttattaagggacggagggagtac 7459819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 173
Target Start/End: Original strand, 34827479 - 34827515
Alignment:
Q  137 gtcaactaggtcatttatttagagacggagggagtac 173  Q
    ||||||||||||||||||| || ||||||||||||||    
T  34827479 gtcaactaggtcatttattaagggacggagggagtac 34827515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 70
Target Start/End: Original strand, 52550744 - 52550776
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaattttta 70  Q
    |||||||| ||||||||||||||||||||||||    
T  52550744 ctcgatgaatatttttaaaatattaaattttta 52550776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 38 - 174
Target Start/End: Original strand, 44235 - 44371
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  44235 ctcgatgagtatttttaaaatattaaatttttataaatttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgcgtgtcagag 44334  T
Q  138 tcaactaggtcatttatttagagacggagggagtact 174  Q
    ||||||||||||||||||||| |||||||||||||||    
T  44335 tcaactaggtcatttatttagggacggagggagtact 44371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 8e-45; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 38 - 173
Target Start/End: Original strand, 643558 - 643693
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  643558 ctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 643657  T
Q  138 tcaactaggtcatttatttagagacggagggagtac 173  Q
    ||||||||||||||||||||| ||||||||||||||    
T  643658 tcaactaggtcatttatttagggacggagggagtac 643693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 31854952 - 31854818
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||    
T  31854952 ctcgatgagtatttttaaaatattaaatttttataattttttataatagagaattgaagatatcaaagataaaacatatgcattggtatgtgtatcagag 31854853  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||| |||||||||||||| |||||||||||||    
T  31854852 tcaactgggtcatttatttagggacggagggagta 31854818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 38 - 178
Target Start/End: Complemental strand, 22020410 - 22020270
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||| ||||        |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  22020410 ctcgatgagtatttttaaaatattaaattttgataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 22020311  T
Q  138 tcaactaggtcatttatttagagacggagggagtactattt 178  Q
    ||||||||||||||||||||   ||||| |||||| |||||    
T  22020310 tcaactaggtcatttatttaagaacggaaggagtagtattt 22020270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 11114699 - 11114565
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||| ||||||||||| |||||||||||||||||| |||||||||||||     
T  11114699 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaatcgaagatatcaaagataaaacatatgcattggtatgtgtgtcagaa 11114600  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||||||||| || |||||||||||||    
T  11114599 tcaactaggtcatttattgagggacggagggagta 11114565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 24150875 - 24150741
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| ||||||| |||||||||| ||||||||||||||    
T  24150875 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaatatatgcattggtatgtgtgtcagag 24150776  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||||||||||||  ||||| ||||||    
T  24150775 tcaactaggtcatttatttaggaacggatggagta 24150741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 38 - 147
Target Start/End: Original strand, 29986285 - 29986394
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  29986285 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 29986384  T
Q  138 tcaactaggt 147  Q
    ||||||||||    
T  29986385 tcaactaggt 29986394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 38 - 153
Target Start/End: Original strand, 7098000 - 7098115
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  7098000 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagaaaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 7098099  T
Q  138 tcaactaggtcattta 153  Q
    |||||||| |||||||    
T  7098100 tcaactagatcattta 7098115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 38 - 178
Target Start/End: Complemental strand, 25435545 - 25435406
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||| ||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||||| ||    
T  25435545 ctcgatgaatatttttaaaatattatatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtca-ag 25435447  T
Q  138 tcaactaggtcatttatttagagacggagggagtactattt 178  Q
    |||||||| ||||||||| ||  |||||||||||| |||||    
T  25435446 tcaactagatcatttattgaggaacggagggagtattattt 25435406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 38 - 178
Target Start/End: Complemental strand, 29403778 - 29403638
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||| | ||||||||||||        | |||||||||||||||||||| ||||||||||| |||||| ||||||||||||||    
T  29403778 ctcgatgagtatttttaaaatttaaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatacgcattggtatgtgtgtcagag 29403679  T
Q  138 tcaactaggtcatttatttagagacggagggagtactattt 178  Q
    ||||||| |||||||||| |  ||||||| ||||| |||||    
T  29403678 tcaactaagtcatttattaaaggacggagagagtaatattt 29403638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 38 - 174
Target Start/End: Complemental strand, 18992037 - 18991902
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | |||| |||||||||||||||  ||||||||||||||||| || |||||||||||    
T  18992037 ctcgatgaatatttttaaaatattaaatttttataattttttt-agtagaaaattgaagatatcaaaaataaaacatatgcattggtacgtgtgtcagag 18991939  T
Q  138 tcaactaggtcatttatttagagacggagggagtact 174  Q
    |||||||||||| ||||| || |||||||||||||||    
T  18991938 tcaactaggtcacttattcagggacggagggagtact 18991902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 20662186 - 20662321
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||| ||||||||        | ||||||||||||||||| || |||||||||||||||||| ||||| ||||||||    
T  20662186 ctcgatgagtatttttaaaatattaaacttttataattttttttagtagagaattgaagatattaaagataaaacatatgcattggtatgtatgtcagag 20662285  T
Q  138 tcaactaggtcatttattt-agagacggagggagta 172  Q
     |||||||||||||||||| || |||||||| ||||    
T  20662286 gcaactaggtcatttatttgagggacggaggaagta 20662321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 38 - 173
Target Start/End: Complemental strand, 33121676 - 33121541
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||| ||||          |||||||||||||||||||| |||||||||||||||||| || |||||||  ||    
T  33121676 ctcgatgaatatttttaaaatattaaattttcataattttttttggtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaag 33121577  T
Q  138 tcaactaggtcatttatttagagacggagggagtac 173  Q
    |||||||||||||||||| || ||||||||||||||    
T  33121576 tcaactaggtcatttattaagggacggagggagtac 33121541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 8796183 - 8796050
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||| |||||||||||||||||||||||||||||        | ||||||||| |||||||||| |||||||||||| ||||| ||||||||||||||    
T  8796183 ctcgataagtatttttaaaatattaaatttttataattttttt-agtagagaattaaagatatcaaagataaaacatatacattggtatgtgtgtcagag 8796085  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||| | |||||||||| ||||||| |||||    
T  8796084 tcaactagatgatttatttagggacggagtgagta 8796050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 38 - 175
Target Start/End: Complemental strand, 30237301 - 30237162
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaa-tagagaattgaagatatcaatgataaaa-catatgcattgatatgtgtgtcag 135  Q
    |||||||| |||||||||||||||||||||||||||         | |||||||| ||||||||||| ||||||| ||||||||||| || |||||||||    
T  30237301 ctcgatgaatatttttaaaatattaaatttttataatttttttttagtagagaatcgaagatatcaaagataaaaacatatgcattggtacgtgtgtcag 30237202  T
Q  136 agtcaactaggtcatttatttagagacggagggagtacta 175  Q
    ||||||||||||||| |||| || ||||||||||||||||    
T  30237201 agtcaactaggtcatctattgagggacggagggagtacta 30237162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 38 - 150
Target Start/End: Original strand, 13207080 - 13207192
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||| ||||||| ||||          |||||||||||||||||||| |||||||||||||||||| || |||||||||||    
T  13207080 ctcgatgaatatttttaaaatataaaattttcataatttttttttgtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagag 13207179  T
Q  138 tcaactaggtcat 150  Q
    |||||||||||||    
T  13207180 tcaactaggtcat 13207192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 25163298 - 25163183
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| ||||||||||||||||| |||| ||||        || ||||||||||||||||||| |||||||||||||||||| || |||||||  |     
T  25163298 ctcgatgaatatttttaaaatattaagttttcataattttttttaacagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaaa 25163199  T
Q  138 tcaactaggtcattta 153  Q
    |||||||| |||||||    
T  25163198 tcaactagatcattta 25163183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 172
Target Start/End: Original strand, 16434699 - 16434789
Alignment:
Q  82 aatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagagacggagggagta 172  Q
    |||||| |||| ||||||| || ||||| | |||||||||| |||| ||||| ||||||||||| |||| || |  | |||||||||||||    
T  16434699 aatagataattaaagatattaaagataagaaatatgcattggtatgagtgtctgagtcaactagttcatctaatatgggacggagggagta 16434789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 29979059 - 29979021
Alignment:
Q  137 gtcaactaggtcatttatttagagacggagggagtacta 175  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  29979059 gtcaactaggtcatttattaagggacggagggagtacta 29979021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 3e-44; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 29791076 - 29790942
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  29791076 ctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 29790977  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||||| |||||||||||||    
T  29790976 tcaactaggtcatttatttagggacggagggagta 29790942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 38739791 - 38739657
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        ||||||||||||||||||| || |||||||||||||||||| ||||||||||||||    
T  38739791 ctcgatgagtatttttaaaatattaaatttttataattttttttaatagagaattgaagatattaaagataaaacatatgcattggtatgtgtgtcagag 38739692  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||||  |||||||||||||    
T  38739691 tcaactaggtcatttatttaaggacggagggagta 38739657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 40013785 - 40013651
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  40013785 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 40013686  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||||||||| || |||||||||||||    
T  40013685 tcaactaggtcatttattaagggacggagggagta 40013651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 39 - 172
Target Start/End: Complemental strand, 37710032 - 37709899
Alignment:
Q  39 tcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagt 138  Q
    |||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||||||||| ||||| ||||||||| |||||    
T  37710032 tcgatgagtatttttaaaatattaaatttttataagtttttttaatagagaattgaagatatcaaagataaaacatatacattggtatgtgtgttagagt 37709933  T
Q  139 caactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||||||||||| |||||||||||||    
T  37709932 caactaggtcatttatttagggacggagggagta 37709899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 38 - 177
Target Start/End: Original strand, 2805603 - 2805742
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  2805603 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcagag 2805702  T
Q  138 tcaactaggtcatttatttagagacggagggagtactatt 177  Q
    |||||| |||||||||||||| ||||||||||||| ||||    
T  2805703 tcaactgggtcatttatttagggacggagggagtattatt 2805742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 30290058 - 30289924
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||| |||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  30290058 ctcgatcagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcagag 30289959  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||||| |||||||||||||    
T  30289958 tcaactaggtcatttatttagggacggagggagta 30289924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 45081946 - 45081812
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||| ||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  45081946 ctcgatgggtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 45081847  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||| |||||||||| |||||||||||||    
T  45081846 tcaactaggttatttatttagggacggagggagta 45081812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 1580892 - 1581026
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | |||||||||||||||||||| ||||||| ||||||||||||| |||||||||||    
T  1580892 ctcgatgaatatttttaaaatattaaatttttataaatttttttagtagagaattgaagatatcaaagataaaatatatgcattgatacgtgtgtcagag 1580991  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||||||||| || |||||||||||||    
T  1580992 tcaactaggtcatttattcagggacggagggagta 1581026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 38 - 176
Target Start/End: Complemental strand, 43066260 - 43066123
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | || ||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  43066260 ctcgatgaatatttttaaaatattaaatttttataattttttt-agtaaagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 43066162  T
Q  138 tcaactaggtcatttatttagagacggagggagtactat 176  Q
    ||||||||||||||||||||| |||||||| ||||||||    
T  43066161 tcaactaggtcatttatttagggacggaggtagtactat 43066123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 3293228 - 3293363
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaa-tagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcaga 136  Q
    ||||||||||||||||||||||||||||||||||||         | |||||||||||||||||||| |||||||||||||||||| ||| |||||||||    
T  3293228 ctcgatgagtatttttaaaatattaaatttttataatttttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatatgtgtcaga 3293327  T
Q  137 gtcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||| |||||||||||| |||||||||||||    
T  3293328 gtcaactagatcatttatttagggacggagggagta 3293363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 6470979 - 6470845
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | |||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  6470979 ctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattgatacgtgtgtcagag 6470880  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||| |||| || ||||| |||||||    
T  6470879 tcaactaggtcatatattgagggacggtgggagta 6470845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 13138259 - 13138393
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||| || |||||||||||    
T  13138259 ctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagag 13138358  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||||||||| || ||| |||||||||    
T  13138359 tcaactaggtcatttattgagggacagagggagta 13138393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 30380664 - 30380530
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||||||||||||||||||||||||||| |||        | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  30380664 ctcgatgagtatttttaaaatattaaatttttttaattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagag 30380565  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||| ||| ||| |||||||| |||||||||||||    
T  30380564 tcaattagatcacttatttagggacggagggagta 30380530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 82 - 172
Target Start/End: Complemental strand, 38845290 - 38845200
Alignment:
Q  82 aatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  38845290 aatagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 38845200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 38 - 170
Target Start/End: Complemental strand, 23248911 - 23248779
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||| ||||||| |||||||||||||||||||||| ||||| ||||    
T  23248911 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaatatatcaaagataaaacatatgcattgatatatgtgttagag 23248812  T
Q  138 tcaactaggtcatttatttagagacggagggag 170  Q
    ||||||||||||||||||||  || ||||||||    
T  23248811 tcaactaggtcatttatttaaggagggagggag 23248779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 8351007 - 8351141
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | |||||||||||||||||||| ||||||||||||||| || || |||||||||||    
T  8351007 ctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcactggtacgtgtgtcagag 8351106  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||| ||| |||||||| |||||||||||||    
T  8351107 tcaactagatcacttatttagggacggagggagta 8351141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 84 - 172
Target Start/End: Complemental strand, 2986426 - 2986339
Alignment:
Q  84 tagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  2986426 tagagaattgaagatatcaa-gataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttattcagagacggagggagta 2986339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 38 - 175
Target Start/End: Complemental strand, 39361259 - 39361125
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | ||||||||||||||||||||  ||||||||||||||||| ||||||||||||||    
T  39361259 ctcgatgagtatttttaaaatattaaatttttataaaattttttagtagagaattgaagatatcaaaaataaaacatatgcattggtatgtgtgtcagag 39361160  T
Q  138 tcaactaggtcatttatttagagacggagggagtacta 175  Q
    |   |||| ||||||||||||  |||||| ||||||||    
T  39361159 t---ctagatcatttatttaggaacggagagagtacta 39361125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 38 - 144
Target Start/End: Complemental strand, 12893665 - 12893559
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||| ||||        | |||||||||||||||||||| ||||||||||||||||||||| ||||||| |||    
T  12893665 ctcgatgaatatttttaaaatattaaattttcataattttttttagtagagaattgaagatatcaaagataaaacatatgcattgatacgtgtgtcggag 12893566  T
Q  138 tcaacta 144  Q
    |||||||    
T  12893565 tcaacta 12893559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 41 - 172
Target Start/End: Complemental strand, 14522511 - 14522380
Alignment:
Q  41 gatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtca 140  Q
    ||||| |||||||||||||||||||||||||||        | |||||||||||||||||||| ||||||||||||||||||||| |||||| | | |||    
T  14522511 gatgaatatttttaaaatattaaatttttataaatttttttagtagagaattgaagatatcaaagataaaacatatgcattgatacgtgtgttaaaatca 14522412  T
Q  141 actaggtcatttatttagagacggagggagta 172  Q
    ||||| |||| |||| || || | ||||||||    
T  14522411 actagatcatctattgagggatgaagggagta 14522380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 44123803 - 44123695
Alignment:
Q  42 atgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaa 141  Q
    |||| |||||||||||||||||||||| ||||        | ||||||||||||||| |||| ||||||||||||||||||||| ||||||| |||||||    
T  44123803 atgaatatttttaaaatattaaattttcataattttttttagtagagaattgaagatttcaaagataaaacatatgcattgatacgtgtgtcggagtcaa 44123704  T
Q  142 ctaggtcat 150  Q
    |||| ||||    
T  44123703 ctagatcat 44123695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 153
Target Start/End: Original strand, 31127932 - 31128047
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| ||||||||||||||||| |||| ||||        |||||||||||||||||||||| |||||||||||||||||| || |||||||  ||    
T  31127932 ctcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaag 31128031  T
Q  138 tcaactaggtcattta 153  Q
    |||||||  |||||||    
T  31128032 tcaactaaatcattta 31128047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 41 - 150
Target Start/End: Original strand, 9302483 - 9302592
Alignment:
Q  41 gatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtca 140  Q
    ||||| |||||||||||||||||||||| ||||        | | |||||||||||||||||| |||||||||||| |||| ||||||||| ||||||||    
T  9302483 gatgaatatttttaaaatattaaattttcataaatttttttagttgagaattgaagatatcaaagataaaacatatacatttatatgtgtgccagagtca 9302582  T
Q  141 actaggtcat 150  Q
    | ||||||||    
T  9302583 attaggtcat 9302592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 18809410 - 18809295
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||| |||| |||| ||||        |||||||||||||||||||||| |||||||||||||||||| || |||||||  |     
T  18809410 ctcgatgaatatttttaaaatgttaagttttcataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaac 18809311  T
Q  138 tcaactaggtcattta 153  Q
    |||||||| |||||||    
T  18809310 tcaactagatcattta 18809295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 45253883 - 45253749
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgt-gtcaga 136  Q
    |||||||| |||||||||||||||||||||| ||||          ||||||||||||||||||||  ||||||||||||||||| || |||| ||| ||    
T  45253883 ctcgatgaatatttttaaaatattaaattttcataattttttttg-tagagaattgaagatatcaaaaataaaacatatgcattggtacgtgtcgtcgga 45253785  T
Q  137 gtcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||| |||| |||| || ||| |||||||||    
T  45253784 gtcaactagatcatctattaagggacagagggagta 45253749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 886240 - 886306
Alignment:
Q  84 tagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcat 150  Q
    ||||||||| |||||||||| |||||||||||||||||| || ||||||| |||||||| |||||||    
T  886240 tagagaattaaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaaccaggtcat 886306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 25256422 - 25256353
Alignment:
Q  84 tagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcattta 153  Q
    |||||||||||||||||||| |||||||||| ||||||| |||  ||||| ||||||||||| |||||||    
T  25256422 tagagaattgaagatatcaaagataaaacatttgcattggtataagtgtcggagtcaactagatcattta 25256353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 174
Target Start/End: Complemental strand, 14847295 - 14847208
Alignment:
Q  87 agaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagagacggagggagtact 174  Q
    |||||| |||||||||| |||||||||||||||||| |  ||||||| || ||||||||||||| |||  || |||| ||||||||||    
T  14847295 agaattaaagatatcaaagataaaacatatgcattggtgcgtgtgtcggaatcaactaggtcatctatcgagggacgtagggagtact 14847208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 172
Target Start/End: Complemental strand, 11854614 - 11854524
Alignment:
Q  82 aatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||||||||||  |||||| |||||||||| || |||||||  |||||||||| || |||| |  | |||||||||||||    
T  11854614 aatagagaattgaagatatcaaaaataaaatatatgcattggtacgtgtgtcgaagtcaactagatcgtttaatatgggacggagggagta 11854524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 10658107 - 10658000
Alignment:
Q  42 atgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaa 141  Q
    |||| |||||||||||||||||||||| ||||        | |||||||||||||||||||| |||||||||||||  ||| ||  |||||| |||||||    
T  10658107 atgaatatttttaaaatattaaatttt-ataattttttttagtagagaattgaagatatcaaagataaaacatatgtgttggtacatgtgtcggagtcaa 10658009  T
Q  142 ctaggtcat 150  Q
    ||| |||||    
T  10658008 ctaagtcat 10658000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 73
Target Start/End: Complemental strand, 38845741 - 38845706
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataa 73  Q
    ||||||||||||||||||||||||||||||||||||    
T  38845741 ctcgatgagtatttttaaaatattaaatttttataa 38845706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 173
Target Start/End: Original strand, 23764624 - 23764714
Alignment:
Q  84 tagagaattgaagatatcaatgataaaacatatgcattgatatg-tgtgtcagagtcaactaggtcatttatttagagacggagggagtac 173  Q
    |||||||||||| |||||||  ||||||||||||||||| || | ||||||  |||||||||| | ||||||  || ||||||| ||||||    
T  23764624 tagagaattgaatatatcaaatataaaacatatgcattggtacgttgtgtcgaagtcaactagattatttatcgagggacggagagagtac 23764714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 143
Target Start/End: Original strand, 25173796 - 25173902
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaattttt-ataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcaga 136  Q
    |||||||| ||||||||||||| |||| |||| ||||        |||||| |||||||||||| || ||||||||||||| |||| |||| ||| ||||    
T  25173796 ctcgatgaatatttttaaaataataaaattttcataaatttttttaatagaaaattgaagatattaaagataaaacatatgtattggtatgcgtgacaga 25173895  T
Q  137 gtcaact 143  Q
     ||||||    
T  25173896 atcaact 25173902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 173
Target Start/End: Original strand, 30290150 - 30290186
Alignment:
Q  137 gtcaactaggtcatttatttagagacggagggagtac 173  Q
    ||||||||||||||||||| || ||||||||||||||    
T  30290150 gtcaactaggtcatttattaagggacggagggagtac 30290186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 150
Target Start/End: Complemental strand, 42785988 - 42785920
Alignment:
Q  82 aatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcat 150  Q
    |||||| |||| ||| ||| || ||||||  |||||||||| ||| |||||| ||||||||||||||||    
T  42785988 aatagataattaaagttattaaagataaataatatgcattggtatatgtgtctgagtcaactaggtcat 42785920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 12886 - 12752
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||  ||||||||||||||    
T  12886 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattagtatgtgtgtcagag 12787  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||| |||||||| |||||||||||||    
T  12786 tcaactaggtcacttatttagggacggagggagta 12752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 87; Significance: 7e-42; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 10527 - 10393
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||| |||||||||||||||||  ||||||||||||||    
T  10527 ctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattagtatgtgtgtcagag 10428  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||| |||||||| |||||||||||||    
T  10427 tcaactaggtcacttatttagggacggagggagta 10393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 14193 - 14059
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||||||||||||||||||||||| |||||||        | |||||||||||||||||||| |||||||||||||||||| || |||| ||||||    
T  14193 ctcgatgagtatttttaaaatattaaatatttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtatcagag 14094  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||| |||||||| |||||||||||||    
T  14093 tcaactaggtcacttatttagggacggagggagta 14059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 41 - 172
Target Start/End: Original strand, 41347 - 41478
Alignment:
Q  41 gatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtca 140  Q
    ||||||||||||||||||||||||| |||||||        | |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  41347 gatgagtatttttaaaatattaaatatttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtca 41446  T
Q  141 actaggtcatttatttagagacggagggagta 172  Q
    ||||||||||||||| || |||||||||||||    
T  41447 actaggtcatttattgagggacggagggagta 41478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 117455 - 117321
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    ||||||||||||||||||||||||||||||||||||        | || | |||||||||||| || |||||||||||||||||||||||||||||||||    
T  117455 ctcgatgagtatttttaaaatattaaatttttataattttttttagtaaataattgaagatattaaagataaaacatatgcattgatatgtgtgtcagag 117356  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||| |||||||||||| |||||||||||||    
T  117355 tcaactagatcatttatttagggacggagggagta 117321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 38 - 172
Target Start/End: Original strand, 15343 - 15477
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||||||||        | ||||||||||||||||||||   |||| ||||||||||| || |||||| ||||    
T  15343 ctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaacagtaaatcatatgcattggtacgtgtgttagag 15442  T
Q  138 tcaactaggtcatttatttagagacggagggagta 172  Q
    |||||||||||| ||||| || ||| |||||||||    
T  15443 tcaactaggtcagttattcagggaccgagggagta 15477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 131
Target Start/End: Original strand, 12583 - 12666
Alignment:
Q  48 atttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtg 131  Q
    ||||||||||||||||||||| ||||        ||||||||||||||||||| || |||||||||||||||||| ||| ||||    
T  12583 atttttaaaatattaaattttcataattttttctaatagagaattgaagatattaacgataaaacatatgcattggtatatgtg 12666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 144
Target Start/End: Original strand, 38487 - 38593
Alignment:
Q  38 ctcgatgagtatttttaaaatattaaatttttataannnnnnnnaatagagaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagag 137  Q
    |||||||| |||||||||||||||||||||| |||         | |||| ||||||||||||||| |||||||||||||||||| || || ||||  ||    
T  38487 ctcgatgaatatttttaaaatattaaattttcatagttttttttagtagataattgaagatatcaaagataaaacatatgcattggtacgtatgtcgaag 38586  T
Q  138 tcaacta 144  Q
    |||||||    
T  38587 tcaacta 38593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 173
Target Start/End: Complemental strand, 14430 - 14344
Alignment:
Q  87 agaattgaagatatcaatgataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagagacggagggagtac 173  Q
    ||||||||||||||||| ||||||||||||| |||  || || |||| || |||||||| | ||||||| || ||| ||||||||||    
T  14430 agaattgaagatatcaaagataaaacatatgtattagtaagtatgtcggaatcaactagattatttattgagggaccgagggagtac 14344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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