View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8510_low_37 (Length: 241)
Name: NF8510_low_37
Description: NF8510
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8510_low_37 |
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Alignment Details
Target: chr2 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 26278717 - 26278494
Alignment:
| Q |
1 |
tagtcttcttttccaaatgtagttgacttaaaataactgccatcatcttatatatcattgtacacccatcaaacatacatagaaaagtttaaaacagatc |
100 |
Q |
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| T |
26278717 |
tagtcttcttttccaaatgtagttgacttaaaataactgccatcatcttatatatcattgtacacccatcaaacatacatagaaaagttaaaaacagatc |
26278618 |
T |
|
| Q |
101 |
aataatgtgcacttgttttgtggcaggcaatacaaaataaacttcaacaagatataacaaattcagcagggctctctgactcacacgaagaaagaaagnn |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26278617 |
aataatgtgcacttgttttgtggcaggcaatacaaaataaacttcaacaagatataacaaattcagcagggctctctgactcacacgaagaaagaaagaa |
26278518 |
T |
|
| Q |
201 |
nnnnntggagcaagtgtgaagggt |
224 |
Q |
| |
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||||||||||||||||||| |
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| T |
26278517 |
aaaaatggagcaagtgtgaagggt |
26278494 |
T |
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