View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8511_low_102 (Length: 234)
Name: NF8511_low_102
Description: NF8511
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8511_low_102 |
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Alignment Details
Target: chr7 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 34 - 209
Target Start/End: Original strand, 44540650 - 44540828
Alignment:
| Q |
34 |
taaaatgctcggactaaagaggatagggatagcagacaagcatttcgacttcttactttcccttttttacttgtaaaacgttccatttattcttttatat |
133 |
Q |
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| T |
44540650 |
taaagtgctcggtataatgaggatagggttagcagacgagcattctgaattctttcttttccttttttacttgtaaaaagttccatttcttcttttatat |
44540749 |
T |
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| Q |
134 |
acataattttagtttattgaaatgcagattctggg---atatttgcctccattatcttaatccggttgtattgcctaac |
209 |
Q |
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| T |
44540750 |
acataattttagtttattgaaatgcagattctgggaatatatttgcctccattatcttaatccggttgtattgcctaac |
44540828 |
T |
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