View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8511_low_26 (Length: 436)
Name: NF8511_low_26
Description: NF8511
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8511_low_26 |
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Alignment Details
Target: chr8 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 28 - 415
Target Start/End: Original strand, 35645184 - 35645571
Alignment:
| Q |
28 |
cgtatgaaagaattgttttgaaannnnnnnngaataataaagaattgctttgaaatagttgaataaatattatttctttcgtatatttaactatgttatt |
127 |
Q |
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| T |
35645184 |
cgtatgaaagaattgttttgaaattttttttgaataataaagaattgctttgaaagagttgaataaatattatttttttcgtatatttaactatgttatt |
35645283 |
T |
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| Q |
128 |
ctgtgtaatttgattataatttatgttagtttatccgttttttcctattgcattcacatgttcaaattattttgtagattatataacatacggaaatata |
227 |
Q |
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| T |
35645284 |
ttgtgtaatttgattataatttatgtttgtttatctgttttttcctattgcattcacatgttcaaattattttgtagattatataacatacggaaacata |
35645383 |
T |
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| Q |
228 |
ctgataaattgtagagcactgtgtaaataattttcaatatatcgaagtgtgagatcaaatatatttatcgcgaagctaattgatacgtaaatcaccttat |
327 |
Q |
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| T |
35645384 |
ccgacaaattgtagagcactgtgtaaataatttctaatatatcgaagtgtgagatcaagtatatttatagcgaagctaattgatacgtaaatcaccttat |
35645483 |
T |
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| Q |
328 |
aaatttccgacataatggcaagcttggtttgatagagttctcaactcctcgtcctaccttaattttgatgttacttgatggttgtcga |
415 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
35645484 |
aaatttcggacataatggcaagcttggtttgatagagttctcaactcctcgtcctaccttaattttgatgttatctgatggttgtcga |
35645571 |
T |
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