View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8511_low_30 (Length: 411)
Name: NF8511_low_30
Description: NF8511
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8511_low_30 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 364; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 12 - 411
Target Start/End: Original strand, 26434320 - 26434719
Alignment:
| Q |
12 |
tcatcatgaatcacttgtaaaactaaaagtaatatctgattttctaagaaaaagtgttcgtggcatggtaaataatccacgtatgaagatctaaaatttt |
111 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
26434320 |
tcattatgaatcacttgtaaaactaaaagtaatatctgattttctaagaaaaagtgtttgtggcatggtaaataatccacgtatgaagatctaaaatttt |
26434419 |
T |
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| Q |
112 |
tacaaagcatgagagatctacatggatatccaagtgggaccaaatagtcaattttctacataaatttgcctcactagattccataaagggtcttatactt |
211 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
26434420 |
tacaaagcatgagagatctacatagatatccaagtgggaccaaatagtcaattttctacagaaatttgcctcactagattccataaagggtcttatactt |
26434519 |
T |
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| Q |
212 |
tcttttcatttagtaataagaacaaatgggaaacctacaaagtactaaattcagaatcatgtgcaaaagctagtaacacagattttcagtggaatccaag |
311 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||| |
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| T |
26434520 |
tcttttcatttagtaataagaacaaatggcaaacctacaaagtactaaattcagaatcatgtgcagaagctagcaacacagattttcagtggaatgcaag |
26434619 |
T |
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| Q |
312 |
ttcataagataagtggaagaaataattcaaattgtacattttagacgcttatggatgtagtatcgtatcataaacagaacttccaaattactttgaggtc |
411 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
26434620 |
ttcataagataagtggaagaaataattcaaattgtacattttagacgcttatggatgtagtatcgtatcataaacagaacttccaaattactttggggtc |
26434719 |
T |
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