View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8511_low_4 (Length: 627)

Name: NF8511_low_4
Description: NF8511
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8511_low_4
NF8511_low_4
[»] chr4 (90 HSPs)
chr4 (128-262)||(35124347-35124481)
chr4 (126-257)||(38345819-38345949)
chr4 (129-271)||(23297399-23297538)
chr4 (129-271)||(29877600-29877742)
chr4 (126-257)||(948030-948162)
chr4 (133-234)||(3564185-3564286)
chr4 (126-271)||(43699464-43699611)
chr4 (171-271)||(48591407-48591507)
chr4 (171-271)||(52274103-52274203)
chr4 (171-262)||(28074368-28074458)
chr4 (136-260)||(1374356-1374481)
chr4 (125-271)||(33533885-33534031)
chr4 (128-271)||(40699316-40699463)
chr4 (153-271)||(41228888-41229006)
chr4 (171-271)||(7148775-7148875)
chr4 (126-271)||(12495627-12495773)
chr4 (191-271)||(17222852-17222932)
chr4 (131-271)||(18424261-18424400)
chr4 (125-260)||(42611862-42611997)
chr4 (133-271)||(15184512-15184649)
chr4 (126-268)||(19725251-19725393)
chr4 (171-271)||(23335645-23335745)
chr4 (171-271)||(896973-897073)
chr4 (132-271)||(7206569-7206708)
chr4 (128-262)||(35405644-35405778)
chr4 (126-240)||(8130446-8130560)
chr4 (153-271)||(46704253-46704370)
chr4 (153-250)||(212952-213048)
chr4 (172-261)||(27368145-27368234)
chr4 (172-268)||(4603318-4603413)
chr4 (171-271)||(36740907-36741007)
chr4 (172-256)||(39932752-39932836)
chr4 (128-268)||(47202786-47202925)
chr4 (124-257)||(32628737-32628867)
chr4 (132-271)||(42617213-42617351)
chr4 (128-259)||(46175974-46176104)
chr4 (128-271)||(52700527-52700669)
chr4 (201-263)||(28663606-28663668)
chr4 (173-271)||(55638064-55638162)
chr4 (171-271)||(488367-488467)
chr4 (136-269)||(22273761-22273881)
chr4 (128-271)||(15179778-15179920)
chr4 (171-262)||(22397297-22397388)
chr4 (127-257)||(10794907-10795036)
chr4 (217-271)||(18630878-18630932)
chr4 (128-198)||(34633359-34633429)
chr4 (134-271)||(22117320-22117456)
chr4 (134-258)||(2494396-2494520)
chr4 (135-258)||(2702711-2702834)
chr4 (134-198)||(3564319-3564383)
chr4 (203-271)||(36255019-36255087)
chr4 (171-262)||(825685-825776)
chr4 (171-258)||(2141644-2141731)
chr4 (191-258)||(21216324-21216391)
chr4 (173-268)||(46650276-46650371)
chr4 (133-262)||(3966695-3966823)
chr4 (129-198)||(42153066-42153135)
chr4 (214-266)||(10046278-10046330)
chr4 (171-262)||(8601204-8601295)
chr4 (128-262)||(30956643-30956777)
chr4 (191-262)||(35010234-35010305)
chr4 (217-268)||(39931530-39931581)
chr4 (135-250)||(43415293-43415408)
chr4 (133-236)||(4331300-4331405)
chr4 (173-271)||(26206337-26206435)
chr4 (129-187)||(30956808-30956866)
chr4 (128-198)||(48687047-48687116)
chr4 (126-187)||(48591325-48591386)
chr4 (193-257)||(2405213-2405276)
chr4 (129-197)||(7148886-7148953)
chr4 (126-262)||(9201609-9201744)
chr4 (220-271)||(9319100-9319151)
chr4 (128-167)||(28663402-28663441)
chr4 (225-260)||(31022457-31022492)
chr4 (154-209)||(31736431-31736486)
chr4 (171-262)||(43983374-43983465)
chr4 (191-254)||(45018556-45018619)
chr4 (221-271)||(2548030-2548080)
chr4 (153-271)||(8057071-8057189)
chr4 (127-257)||(10796345-10796474)
chr4 (221-271)||(11256644-11256693)
chr4 (133-187)||(12495552-12495606)
chr4 (135-212)||(29996681-29996758)
chr4 (125-198)||(35405796-35405869)
chr4 (202-255)||(48238135-48238188)
chr4 (133-198)||(48667783-48667848)
chr4 (152-196)||(11298697-11298741)
chr4 (135-187)||(17222953-17223005)
chr4 (135-187)||(36741028-36741080)
chr4 (132-198)||(38345730-38345795)
[»] scaffold0370 (2 HSPs)
scaffold0370 (275-577)||(13779-14092)
scaffold0370 (479-577)||(8704-8802)
[»] chr2 (67 HSPs)
chr2 (146-271)||(4026904-4027028)
chr2 (131-271)||(38215986-38216122)
chr2 (128-271)||(29774705-29774848)
chr2 (131-271)||(4090452-4090592)
chr2 (127-271)||(25836695-25836839)
chr2 (152-268)||(33321298-33321414)
chr2 (135-256)||(2790068-2790190)
chr2 (191-275)||(36501494-36501578)
chr2 (130-268)||(21788419-21788557)
chr2 (128-271)||(755724-755867)
chr2 (172-271)||(4004823-4004922)
chr2 (128-271)||(11776944-11777087)
chr2 (141-271)||(13056310-13056440)
chr2 (125-239)||(33321418-33321532)
chr2 (153-243)||(34913401-34913491)
chr2 (126-271)||(38471774-38471919)
chr2 (128-271)||(37409603-37409746)
chr2 (171-258)||(887415-887502)
chr2 (171-271)||(12223855-12223955)
chr2 (273-365)||(38638830-38638921)
chr2 (152-271)||(29133650-29133769)
chr2 (121-238)||(2757087-2757202)
chr2 (135-268)||(5903500-5903633)
chr2 (126-269)||(13097874-13098019)
chr2 (125-262)||(32522038-32522174)
chr2 (135-271)||(12683589-12683725)
chr2 (273-365)||(38634705-38634796)
chr2 (173-257)||(43787800-43787884)
chr2 (128-271)||(2401605-2401747)
chr2 (135-271)||(7480882-7481021)
chr2 (135-262)||(32366117-32366243)
chr2 (191-262)||(42839313-42839383)
chr2 (152-268)||(5516059-5516176)
chr2 (126-198)||(755612-755684)
chr2 (203-271)||(23956247-23956315)
chr2 (189-269)||(39592270-39592350)
chr2 (135-262)||(22898349-22898475)
chr2 (190-252)||(12442835-12442897)
chr2 (173-246)||(30995908-30995984)
chr2 (128-198)||(33321215-33321285)
chr2 (499-573)||(38691434-38691508)
chr2 (133-198)||(8832570-8832635)
chr2 (171-262)||(12238478-12238566)
chr2 (201-262)||(16108114-16108175)
chr2 (146-271)||(27880980-27881105)
chr2 (195-271)||(735991-736067)
chr2 (127-187)||(4533446-4533506)
chr2 (128-231)||(37419987-37420089)
chr2 (178-271)||(8832464-8832560)
chr2 (152-274)||(9140710-9140831)
chr2 (152-210)||(27703502-27703560)
chr2 (128-198)||(36501418-36501488)
chr2 (128-165)||(9140647-9140684)
chr2 (133-237)||(11072911-11073015)
chr2 (133-262)||(24438984-24439113)
chr2 (130-231)||(40301314-40301414)
chr2 (125-197)||(5903729-5903801)
chr2 (155-231)||(8441460-8441536)
chr2 (129-212)||(25836617-25836698)
chr2 (172-232)||(41554602-41554662)
chr2 (135-198)||(5903651-5903714)
chr2 (172-271)||(15155817-15155916)
chr2 (128-167)||(18276905-18276944)
chr2 (217-271)||(17546473-17546527)
chr2 (137-187)||(38010582-38010632)
chr2 (201-271)||(42064884-42064954)
chr2 (173-262)||(8342992-8343080)
[»] chr7 (71 HSPs)
chr7 (135-271)||(38372525-38372661)
chr7 (171-271)||(29378648-29378748)
chr7 (131-271)||(34922894-34923036)
chr7 (134-251)||(30181516-30181633)
chr7 (133-262)||(22575551-22575680)
chr7 (133-262)||(29390543-29390671)
chr7 (153-257)||(44613470-44613574)
chr7 (133-262)||(22319283-22319412)
chr7 (127-262)||(16958775-16958909)
chr7 (128-231)||(40629440-40629542)
chr7 (171-258)||(47511046-47511133)
chr7 (141-267)||(19308478-19308604)
chr7 (125-258)||(14675956-14676087)
chr7 (125-262)||(16932922-16933058)
chr7 (125-262)||(16938305-16938441)
chr7 (126-274)||(37779262-37779405)
chr7 (172-271)||(41677378-41677478)
chr7 (176-271)||(14691282-14691378)
chr7 (135-271)||(22032729-22032865)
chr7 (126-257)||(23119917-23120048)
chr7 (214-270)||(6406856-6406912)
chr7 (135-271)||(47654397-47654533)
chr7 (133-236)||(7098118-7098221)
chr7 (128-259)||(35809050-35809181)
chr7 (173-258)||(20888578-20888664)
chr7 (173-262)||(41094223-41094310)
chr7 (162-267)||(14593142-14593250)
chr7 (218-271)||(46744003-46744056)
chr7 (135-262)||(19913912-19914039)
chr7 (172-270)||(23356475-23356573)
chr7 (128-187)||(29378769-29378828)
chr7 (201-270)||(39279462-39279532)
chr7 (214-271)||(16012744-16012801)
chr7 (172-257)||(43391725-43391810)
chr7 (135-235)||(18837189-18837289)
chr7 (135-187)||(26331778-26331830)
chr7 (128-267)||(35246632-35246768)
chr7 (204-271)||(12473389-12473456)
chr7 (191-250)||(14536905-14536964)
chr7 (125-187)||(22032886-22032948)
chr7 (135-198)||(29390461-29390524)
chr7 (178-261)||(31613658-31613741)
chr7 (128-187)||(35331102-35331161)
chr7 (273-348)||(40766697-40766772)
chr7 (135-257)||(48895264-48895390)
chr7 (223-257)||(14730019-14730053)
chr7 (201-271)||(17944686-17944756)
chr7 (191-257)||(21027510-21027576)
chr7 (129-187)||(25908418-25908476)
chr7 (131-268)||(23137149-23137285)
chr7 (217-262)||(48949769-48949814)
chr7 (172-268)||(991504-991599)
chr7 (201-261)||(7774740-7774799)
chr7 (220-271)||(18765095-18765147)
chr7 (123-258)||(24414478-24414614)
chr7 (136-260)||(28004552-28004675)
chr7 (175-271)||(32917575-32917671)
chr7 (126-198)||(33204947-33205019)
chr7 (132-268)||(44799368-44799502)
chr7 (145-212)||(21249133-21249200)
chr7 (128-231)||(24371430-24371532)
chr7 (125-184)||(40629333-40629392)
chr7 (152-271)||(48021631-48021749)
chr7 (124-198)||(26331878-26331952)
chr7 (191-271)||(9024787-9024868)
chr7 (129-198)||(34923046-34923115)
chr7 (125-186)||(38372683-38372744)
chr7 (152-212)||(12473190-12473250)
chr7 (136-168)||(22515593-22515625)
chr7 (171-235)||(41037756-41037819)
chr7 (132-212)||(42609163-42609243)
[»] chr1 (89 HSPs)
chr1 (133-271)||(4068080-4068218)
chr1 (125-271)||(26435158-26435303)
chr1 (128-271)||(26946087-26946231)
chr1 (137-271)||(35590099-35590233)
chr1 (127-257)||(28689961-28690093)
chr1 (173-271)||(15515330-15515428)
chr1 (132-261)||(18327488-18327617)
chr1 (171-271)||(6337739-6337839)
chr1 (135-271)||(37712035-37712170)
chr1 (173-271)||(37329395-37329493)
chr1 (134-262)||(26988123-26988242)
chr1 (171-271)||(48819302-48819402)
chr1 (171-271)||(3069837-3069937)
chr1 (177-269)||(16888951-16889042)
chr1 (146-269)||(49971229-49971352)
chr1 (128-269)||(13038907-13039048)
chr1 (126-268)||(15791342-15791483)
chr1 (125-271)||(17814148-17814293)
chr1 (126-268)||(32497258-32497399)
chr1 (171-269)||(36422966-36423064)
chr1 (191-268)||(41196696-41196773)
chr1 (153-271)||(9572767-9572886)
chr1 (155-262)||(51162256-51162363)
chr1 (136-261)||(1321510-1321635)
chr1 (133-271)||(16225474-16225610)
chr1 (127-268)||(17628411-17628551)
chr1 (171-271)||(45267468-45267569)
chr1 (171-271)||(1005343-1005443)
chr1 (127-271)||(5347114-5347257)
chr1 (127-262)||(5243396-5243530)
chr1 (152-271)||(20169248-20169367)
chr1 (133-271)||(46473059-46473197)
chr1 (173-262)||(50919493-50919581)
chr1 (135-271)||(26542940-26543076)
chr1 (134-268)||(15631870-15632004)
chr1 (201-271)||(18317034-18317104)
chr1 (153-271)||(46689533-46689651)
chr1 (135-232)||(1265715-1265812)
chr1 (196-257)||(23544819-23544880)
chr1 (125-257)||(35282591-35282722)
chr1 (129-224)||(391129-391225)
chr1 (172-271)||(10082254-10082354)
chr1 (130-262)||(10365133-10365264)
chr1 (152-271)||(10850049-10850173)
chr1 (171-271)||(22593390-22593490)
chr1 (136-259)||(37156915-37157036)
chr1 (130-198)||(37712180-37712248)
chr1 (136-271)||(41003356-41003490)
chr1 (130-259)||(1565376-1565504)
chr1 (171-262)||(3116054-3116144)
chr1 (171-262)||(31378743-31378834)
chr1 (136-235)||(37148112-37148211)
chr1 (201-260)||(39658317-39658376)
chr1 (128-198)||(28690117-28690187)
chr1 (128-198)||(37329315-37329385)
chr1 (133-198)||(35897527-35897592)
chr1 (173-262)||(36259283-36259372)
chr1 (129-197)||(6900625-6900693)
chr1 (134-258)||(16708765-16708889)
chr1 (125-262)||(19284853-19284992)
chr1 (171-271)||(22103114-22103212)
chr1 (220-271)||(14461024-14461075)
chr1 (171-262)||(28122619-28122710)
chr1 (174-245)||(39941516-39941587)
chr1 (128-187)||(41196613-41196672)
chr1 (135-198)||(47413485-47413548)
chr1 (208-262)||(1683893-1683947)
chr1 (153-259)||(25485733-25485839)
chr1 (136-198)||(26435086-26435148)
chr1 (195-261)||(29333444-29333510)
chr1 (174-236)||(39941447-39941509)
chr1 (156-262)||(42591370-42591476)
chr1 (134-231)||(35897646-35897743)
chr1 (173-258)||(46500997-46501082)
chr1 (129-198)||(48819412-48819481)
chr1 (128-196)||(4068230-4068298)
chr1 (172-268)||(13412439-13412534)
chr1 (131-198)||(18317114-18317181)
chr1 (135-186)||(26988273-26988324)
chr1 (220-271)||(38781130-38781181)
chr1 (191-258)||(41130017-41130084)
chr1 (136-198)||(23544904-23544965)
chr1 (146-271)||(12256585-12256709)
chr1 (126-187)||(42367074-42367135)
chr1 (134-198)||(1565284-1565347)
chr1 (126-198)||(46500901-46500973)
chr1 (196-256)||(47413400-47413460)
chr1 (191-271)||(49738284-49738363)
chr1 (171-231)||(51409730-51409790)
[»] chr8 (71 HSPs)
chr8 (127-271)||(32131399-32131543)
chr8 (173-271)||(10298909-10299007)
chr8 (126-268)||(42102065-42102206)
chr8 (136-271)||(16972339-16972475)
chr8 (156-271)||(19327855-19327969)
chr8 (171-271)||(32975690-32975790)
chr8 (171-271)||(34286547-34286646)
chr8 (171-246)||(35453413-35453488)
chr8 (190-260)||(35168435-35168505)
chr8 (133-271)||(42363300-42363437)
chr8 (133-271)||(13131395-13131542)
chr8 (171-249)||(28879061-28879139)
chr8 (127-268)||(12607039-12607179)
chr8 (157-268)||(19925546-19925657)
chr8 (128-271)||(38338834-38338976)
chr8 (152-258)||(16706096-16706202)
chr8 (173-271)||(24350502-24350600)
chr8 (171-257)||(35285931-35286017)
chr8 (133-262)||(19925381-19925509)
chr8 (194-271)||(24866934-24867011)
chr8 (133-262)||(30973954-30974083)
chr8 (127-271)||(14709520-14709663)
chr8 (171-271)||(38895662-38895762)
chr8 (171-258)||(2669651-2669738)
chr8 (171-262)||(9131120-9131211)
chr8 (173-268)||(11988202-11988296)
chr8 (154-262)||(8216895-8217005)
chr8 (152-258)||(32924208-32924314)
chr8 (145-262)||(43577198-43577315)
chr8 (126-262)||(3664094-3664229)
chr8 (130-198)||(28879168-28879236)
chr8 (134-257)||(2563324-2563447)
chr8 (135-262)||(14942391-14942518)
chr8 (128-271)||(37410896-37411038)
chr8 (128-198)||(13131556-13131626)
chr8 (126-198)||(16706001-16706073)
chr8 (135-196)||(16972266-16972327)
chr8 (214-271)||(25333715-25333771)
chr8 (171-271)||(41145379-41145481)
chr8 (171-247)||(28280712-28280788)
chr8 (132-268)||(38195451-38195586)
chr8 (126-262)||(36907636-36907776)
chr8 (133-187)||(2019716-2019770)
chr8 (173-271)||(8752811-8752909)
chr8 (172-262)||(14262330-14262420)
chr8 (171-233)||(32213043-32213105)
chr8 (173-262)||(32751143-32751232)
chr8 (126-196)||(32975802-32975872)
chr8 (173-262)||(218246-218333)
chr8 (173-262)||(694806-694893)
chr8 (173-262)||(699015-699102)
chr8 (173-262)||(731869-731956)
chr8 (173-262)||(855765-855852)
chr8 (130-187)||(24350424-24350481)
chr8 (195-262)||(9782210-9782277)
chr8 (131-198)||(10298833-10298899)
chr8 (173-231)||(13265489-13265547)
chr8 (129-187)||(15763212-15763270)
chr8 (130-196)||(24087286-24087352)
chr8 (134-196)||(34286473-34286535)
chr8 (230-271)||(10213757-10213798)
chr8 (131-168)||(11460791-11460828)
chr8 (130-167)||(18396912-18396949)
chr8 (214-271)||(25465830-25465886)
chr8 (133-198)||(32212923-32212988)
chr8 (156-212)||(7638511-7638567)
chr8 (135-187)||(10213819-10213871)
chr8 (171-271)||(14724948-14725047)
chr8 (132-187)||(24866858-24866913)
chr8 (171-235)||(29243083-29243146)
chr8 (217-268)||(35055468-35055522)
[»] chr3 (69 HSPs)
chr3 (140-271)||(40581059-40581191)
chr3 (136-271)||(53218023-53218158)
chr3 (129-262)||(22809185-22809319)
chr3 (129-269)||(29270322-29270462)
chr3 (171-271)||(43079917-43080017)
chr3 (130-271)||(34707696-34707837)
chr3 (171-271)||(52021249-52021350)
chr3 (134-261)||(10272088-10272213)
chr3 (152-256)||(51409377-51409481)
chr3 (126-268)||(29614152-29614293)
chr3 (133-262)||(584985-585114)
chr3 (171-268)||(40240563-40240660)
chr3 (134-255)||(2086690-2086811)
chr3 (174-271)||(48597850-48597947)
chr3 (135-271)||(28741197-28741333)
chr3 (171-271)||(52421124-52421224)
chr3 (126-268)||(3645261-3645402)
chr3 (175-271)||(42956162-42956258)
chr3 (135-258)||(10448741-10448864)
chr3 (127-271)||(33946533-33946669)
chr3 (130-271)||(1516081-1516221)
chr3 (135-252)||(3845822-3845939)
chr3 (135-240)||(21296733-21296838)
chr3 (171-271)||(3870209-3870309)
chr3 (171-259)||(45331290-45331378)
chr3 (136-250)||(7292649-7292762)
chr3 (126-268)||(20894461-20894602)
chr3 (201-271)||(23816154-23816224)
chr3 (172-257)||(24842104-24842189)
chr3 (125-254)||(4974268-4974397)
chr3 (126-258)||(30383726-30383858)
chr3 (172-268)||(4257286-4257383)
chr3 (172-271)||(32901131-32901230)
chr3 (129-196)||(40240482-40240548)
chr3 (215-271)||(7300410-7300466)
chr3 (125-205)||(23555441-23555521)
chr3 (174-246)||(30473151-30473223)
chr3 (201-253)||(43069079-43069131)
chr3 (179-271)||(43971830-43971922)
chr3 (176-271)||(10521162-10521257)
chr3 (172-271)||(10667402-10667501)
chr3 (220-271)||(20685837-20685888)
chr3 (134-233)||(36266210-36266309)
chr3 (137-198)||(242019-242081)
chr3 (153-247)||(3876270-3876364)
chr3 (217-271)||(37778182-37778236)
chr3 (152-257)||(11528875-11528980)
chr3 (221-262)||(20174932-20174973)
chr3 (217-271)||(29830622-29830680)
chr3 (129-198)||(52895309-52895378)
chr3 (206-262)||(19307979-19308035)
chr3 (135-187)||(20685909-20685961)
chr3 (136-212)||(30499934-30500010)
chr3 (126-186)||(35480303-35480362)
chr3 (127-187)||(43079836-43079896)
chr3 (215-245)||(50021977-50022007)
chr3 (221-271)||(53787735-53787785)
chr3 (201-262)||(20365427-20365488)
chr3 (230-271)||(29830741-29830782)
chr3 (127-261)||(47403755-47403888)
chr3 (130-187)||(53261814-53261871)
chr3 (130-166)||(15444056-15444092)
chr3 (223-271)||(17752114-17752162)
chr3 (223-271)||(19053434-19053482)
chr3 (135-231)||(29830793-29830889)
chr3 (231-271)||(38631056-38631095)
chr3 (217-261)||(48816764-48816808)
chr3 (127-167)||(50540514-50540554)
chr3 (136-196)||(53261678-53261738)
[»] chr5 (99 HSPs)
chr5 (171-270)||(28625483-28625582)
chr5 (130-271)||(42851984-42852124)
chr5 (128-271)||(13060585-13060728)
chr5 (135-271)||(12467231-12467368)
chr5 (137-257)||(14243792-14243913)
chr5 (173-261)||(41534628-41534716)
chr5 (133-271)||(1576596-1576733)
chr5 (133-271)||(1608082-1608219)
chr5 (129-257)||(1473317-1473445)
chr5 (135-271)||(24030182-24030317)
chr5 (128-271)||(12986997-12987140)
chr5 (146-262)||(22201924-22202044)
chr5 (147-257)||(29922186-29922296)
chr5 (201-271)||(41419534-41419604)
chr5 (175-270)||(1868853-1868948)
chr5 (135-262)||(15413959-15414086)
chr5 (172-271)||(17657246-17657345)
chr5 (135-268)||(1371980-1372112)
chr5 (135-248)||(3520509-3520621)
chr5 (171-271)||(35536845-35536948)
chr5 (128-260)||(15122505-15122636)
chr5 (128-268)||(26002957-26003097)
chr5 (171-271)||(41059772-41059872)
chr5 (171-260)||(42706799-42706890)
chr5 (152-271)||(2878660-2878778)
chr5 (190-261)||(31637087-31637158)
chr5 (122-271)||(7364292-7364441)
chr5 (132-253)||(341954-342075)
chr5 (152-233)||(2670059-2670140)
chr5 (128-233)||(11163290-11163395)
chr5 (140-233)||(17128250-17128343)
chr5 (171-271)||(40452460-40452561)
chr5 (146-271)||(43318981-43319106)
chr5 (171-271)||(28357355-28357455)
chr5 (191-269)||(5559904-5559985)
chr5 (135-257)||(40415969-40416091)
chr5 (153-238)||(10537235-10537320)
chr5 (174-271)||(11912085-11912182)
chr5 (171-271)||(13625503-13625604)
chr5 (125-271)||(780551-780696)
chr5 (127-261)||(20458551-20458684)
chr5 (126-198)||(1576743-1576816)
chr5 (126-198)||(1607999-1608072)
chr5 (176-244)||(3977483-3977551)
chr5 (179-271)||(6144749-6144841)
chr5 (157-257)||(11706915-11707015)
chr5 (136-268)||(11991273-11991404)
chr5 (214-262)||(28357187-28357235)
chr5 (127-259)||(33667388-33667519)
chr5 (125-257)||(33757045-33757176)
chr5 (131-235)||(42558740-42558842)
chr5 (171-231)||(43268644-43268704)
chr5 (171-257)||(40697004-40697095)
chr5 (125-257)||(7110984-7111112)
chr5 (127-212)||(35536945-35537028)
chr5 (179-268)||(38461268-38461357)
chr5 (214-271)||(39154744-39154801)
chr5 (126-198)||(17868105-17868177)
chr5 (191-271)||(40152859-40152939)
chr5 (155-262)||(6025977-6026083)
chr5 (172-271)||(7984109-7984208)
chr5 (170-269)||(29418737-29418836)
chr5 (129-187)||(2577482-2577540)
chr5 (133-228)||(6150346-6150437)
chr5 (129-198)||(27806028-27806098)
chr5 (140-250)||(27981916-27982026)
chr5 (135-197)||(41125671-41125733)
chr5 (171-271)||(29659065-29659163)
chr5 (173-234)||(30852176-30852237)
chr5 (172-257)||(39990580-39990665)
chr5 (126-246)||(4728804-4728923)
chr5 (127-187)||(14243949-14244009)
chr5 (191-271)||(23087762-23087842)
chr5 (136-212)||(40452388-40452463)
chr5 (220-271)||(9477388-9477439)
chr5 (173-268)||(16722032-16722126)
chr5 (135-198)||(40697119-40697182)
chr5 (195-262)||(42808878-42808945)
chr5 (202-271)||(2577411-2577481)
chr5 (133-198)||(2878584-2878650)
chr5 (125-235)||(17668357-17668466)
chr5 (130-196)||(42558622-42558688)
chr5 (131-184)||(1868968-1869021)
chr5 (125-198)||(3977586-3977659)
chr5 (172-269)||(6125291-6125387)
chr5 (135-196)||(6125401-6125462)
chr5 (129-258)||(15709888-15710016)
chr5 (152-233)||(22573637-22573718)
chr5 (214-271)||(27805961-27806018)
chr5 (173-231)||(33803814-33803874)
chr5 (125-198)||(41059689-41059762)
chr5 (171-231)||(1943013-1943073)
chr5 (127-199)||(3520409-3520481)
chr5 (231-271)||(6150855-6150895)
chr5 (126-198)||(12467381-12467453)
chr5 (135-187)||(13739243-13739295)
chr5 (133-197)||(13739343-13739407)
chr5 (135-231)||(25332261-25332357)
chr5 (172-228)||(43010639-43010695)
[»] chr6 (59 HSPs)
chr6 (126-261)||(21891331-21891466)
chr6 (135-257)||(25430762-25430882)
chr6 (171-260)||(2034223-2034312)
chr6 (153-270)||(2255719-2255836)
chr6 (130-259)||(7267737-7267866)
chr6 (122-271)||(8014743-8014891)
chr6 (128-271)||(17914906-17915048)
chr6 (128-254)||(24625811-24625937)
chr6 (171-271)||(2027159-2027259)
chr6 (171-267)||(21025214-21025310)
chr6 (135-268)||(3210982-3211120)
chr6 (173-271)||(16589756-16589854)
chr6 (173-271)||(16605526-16605624)
chr6 (153-271)||(29623460-29623578)
chr6 (135-257)||(10873952-10874073)
chr6 (125-268)||(32615401-32615543)
chr6 (153-271)||(6758612-6758730)
chr6 (134-271)||(10687273-10687413)
chr6 (171-261)||(29052336-29052426)
chr6 (152-234)||(30533964-30534046)
chr6 (130-235)||(9894728-9894833)
chr6 (171-271)||(6776811-6776911)
chr6 (172-271)||(32675872-32675971)
chr6 (171-271)||(34801033-34801132)
chr6 (152-271)||(3829902-3830021)
chr6 (172-269)||(1240595-1240693)
chr6 (171-271)||(10755266-10755363)
chr6 (171-271)||(10054384-10054482)
chr6 (135-247)||(6632626-6632738)
chr6 (155-271)||(21610032-21610148)
chr6 (135-267)||(21871271-21871402)
chr6 (220-268)||(32165247-32165295)
chr6 (136-262)||(4808540-4808665)
chr6 (135-262)||(10184322-10184448)
chr6 (141-253)||(10619202-10619312)
chr6 (201-258)||(13429488-13429545)
chr6 (193-269)||(6958649-6958725)
chr6 (132-262)||(1468140-1468268)
chr6 (173-271)||(4272387-4272485)
chr6 (127-262)||(8011036-8011173)
chr6 (215-257)||(9202396-9202438)
chr6 (133-271)||(23239212-23239350)
chr6 (179-257)||(34413331-34413408)
chr6 (175-271)||(991265-991362)
chr6 (132-185)||(11795524-11795577)
chr6 (129-198)||(12816805-12816874)
chr6 (190-255)||(34509934-34509999)
chr6 (133-210)||(35111379-35111456)
chr6 (203-262)||(18078238-18078297)
chr6 (135-198)||(35071338-35071401)
chr6 (153-231)||(2040209-2040287)
chr6 (136-198)||(10755194-10755256)
chr6 (172-230)||(12817116-12817174)
chr6 (133-198)||(21025127-21025192)
chr6 (173-271)||(22816568-22816666)
chr6 (137-198)||(2027089-2027149)
chr6 (158-210)||(6752809-6752861)
chr6 (206-262)||(15054577-15054633)
chr6 (137-197)||(20776468-20776528)
[»] scaffold0024 (2 HSPs)
scaffold0024 (146-271)||(97192-97314)
scaffold0024 (125-194)||(97106-97175)
[»] scaffold0157 (2 HSPs)
scaffold0157 (126-271)||(24704-24850)
scaffold0157 (133-187)||(24871-24925)
[»] scaffold0048 (1 HSPs)
scaffold0048 (152-271)||(58851-58970)
[»] scaffold0012 (1 HSPs)
scaffold0012 (128-262)||(178460-178595)
[»] scaffold0332 (2 HSPs)
scaffold0332 (171-271)||(14729-14829)
scaffold0332 (171-259)||(14848-14937)
[»] scaffold0057 (3 HSPs)
scaffold0057 (146-262)||(24381-24496)
scaffold0057 (152-235)||(43835-43918)
scaffold0057 (130-197)||(24293-24361)
[»] scaffold0004 (2 HSPs)
scaffold0004 (171-262)||(227709-227801)
scaffold0004 (125-262)||(242632-242768)
[»] scaffold0041 (1 HSPs)
scaffold0041 (173-262)||(108986-109073)
[»] scaffold1088 (1 HSPs)
scaffold1088 (141-262)||(1267-1388)
[»] scaffold1367 (1 HSPs)
scaffold1367 (172-271)||(1062-1161)
[»] scaffold0015 (1 HSPs)
scaffold0015 (133-198)||(48536-48601)
[»] scaffold0512 (1 HSPs)
scaffold0512 (179-271)||(4076-4167)
[»] scaffold0006 (1 HSPs)
scaffold0006 (172-268)||(278978-279073)
[»] scaffold0299 (1 HSPs)
scaffold0299 (172-271)||(11283-11382)
[»] scaffold0100 (1 HSPs)
scaffold0100 (173-262)||(38445-38533)
[»] scaffold0071 (1 HSPs)
scaffold0071 (130-166)||(18099-18135)


Alignment Details
Target: chr4 (Bit Score: 91; Significance: 9e-44; HSPs: 90)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 128 - 262
Target Start/End: Original strand, 35124347 - 35124481
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 227  Q
    ||||||| ||||||||||||||| |||||||||||||||||  ||||||||||||| |||  ||||||||||||||||||||| | ||||||||||||||    
T  35124347 agggcccatttggattgacttatttttgagcttatgcaaaacagcttatgcaaatatataaccttttatgtactattcataagcttgtcaaggtagttta 35124446  T
Q  228 tgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    |||||||||||||||||||||||||| ||| ||||    
T  35124447 tgaaaaaacagcttatgaagatacaaattttgtta 35124481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 38345949 - 38345819
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 225  Q
    |||||| |||||||||||||||||| |||||||||||||||||  |||||| ||||||||||  |||||||||| |||||||||||| ||||| ||||||    
T  38345949 ttagggtccgtttggattgacttatgtttgagcttatgcaaaacagcttatccaaataaataagcttttatgtagtattcataagtt-gtcaaagtagtt 38345851  T
Q  226 tatgaaaaaacagcttatgaagatacaatttt 257  Q
    |||||||||||| |||||||||||||||||||    
T  38345850 tatgaaaaaacaacttatgaagatacaatttt 38345819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 129 - 271
Target Start/End: Original strand, 23297399 - 23297538
Alignment:
Q  129 gggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttat 228  Q
    ||||| |||||||||| ||||| |||||||||||||||||  |||||||||||||||||  |||||||||| |||||||||||| |||||||||||||||    
T  23297399 gggcctgtttggattggcttatttttgagcttatgcaaaatagcttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttat 23297498  T
Q  229 gaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |   ||||||||||||||||||||||||| ||||  |||||||    
T  23297499 g---aaacagcttatgaagatacaatttttgttagcgagaact 23297538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 129 - 271
Target Start/End: Original strand, 29877600 - 29877742
Alignment:
Q  129 gggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttat 228  Q
    ||||| |||||||||| ||||| |||||||||||||||||    |||||||||||||||  |||||||||| |||||||||| | |  ||||||||||||    
T  29877600 gggcctgtttggattggcttatttttgagcttatgcaaaacaatttatgcaaataaataagcttttatgtattattcataagcttgctaaggtagtttat 29877699  T
Q  229 gaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||| |||||||||||||||||||||| |||| ||||||||    
T  29877700 gaaaaagcagcttatgaagatacaatttttgttagtgagaact 29877742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 948030 - 948162
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 225  Q
    |||||||||||||||| |||||||  ||| |||||||||||||  ||||||| |||||||||  |||||||||| ||||||||| || ||||||||||||    
T  948030 ttagggcccgtttggaatgacttactttttagcttatgcaaaatagcttatgaaaataaataagcttttatgtattattcataactttgtcaaggtagtt 948129  T
Q  226 tatg-aaaaaacagcttatgaagatacaatttt 257  Q
    |||| |||||||||||||| |||||||||||||    
T  948130 tatgaaaaaaacagcttataaagatacaatttt 948162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 133 - 234
Target Start/End: Original strand, 3564185 - 3564286
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 232  Q
    |||||||||||||||| | |||||||||||||||||  ||||||| ||||||||| |||||||| || |||||||||||| |||||||||||||||||||    
T  3564185 ccgtttggattgacttgtttttgagcttatgcaaaacagcttatgaaaataaataaacttttatatattattcataagtttgtcaaggtagtttatgaaa 3564284  T
Q  233 aa 234  Q
    ||    
T  3564285 aa 3564286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 126 - 271
Target Start/End: Complemental strand, 43699611 - 43699464
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 225  Q
    |||| |||||||||||||| ||||| |||||||||||| ||||   ||||| ||||||||||  |||||||||  |||||||||| | ||||| ||||||    
T  43699611 ttagtgcccgtttggattggcttatttttgagcttatgaaaaacaacttatacaaataaataagcttttatgtcttattcataagcttgtcaatgtagtt 43699512  T
Q  226 tatgaaaaaacag--cttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||||||  |||||||||||||||||||| ||| || |||||    
T  43699511 tatgaaaaaacagctcttatgaagatacaattttcattagtgggaact 43699464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 48591507 - 48591407
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    |||||||||||||||||   |||||| || |||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  48591507 gcttatgcaaataaataagtttttatatattattcatacgcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttaatgagaac 48591408  T
Q  271 t 271  Q
    |    
T  48591407 t 48591407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 52274203 - 52274103
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    ||||||||||||||||| ||||||||||| |||| ||||| |  ||||||||||||| |||||||||||||||||||||||||||||||| | |||||||    
T  52274203 gcttatgcaaataaataaacttttatgtattattgataagcttatcaaggtagtttacgaaaaaacagcttatgaagatacaattttcgtcagtgagaac 52274104  T
Q  271 t 271  Q
    |    
T  52274103 t 52274103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 171 - 262
Target Start/End: Original strand, 28074368 - 28074458
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    |||||||||||||||||  |||||||||| |||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28074368 gcttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa-agcttatgaagatacaattttcgtta 28074458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 136 - 260
Target Start/End: Complemental strand, 1374481 - 1374356
Alignment:
Q  136 tttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa 235  Q
    ||||||||| ||||| ||||||||||||||||||  |||||||||||||| |   ||||||| |  ||||||||| | |||| |||||||||||||||||    
T  1374481 tttggattggcttatttttgagcttatgcaaaaaaacttatgcaaataaaaaagtttttatgcatgattcataagcttgtcatggtagtttatgaaaaaa 1374382  T
Q  236 -cagcttatgaagatacaattttcgt 260  Q
     |||||||||||||||||||||||||    
T  1374381 ccagcttatgaagatacaattttcgt 1374356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 125 - 271
Target Start/End: Original strand, 33533885 - 33534031
Alignment:
Q  125 tttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 224  Q
    |||||| ||||||||||||||||||  |||||| |||| |||||   |||||||||||  |||  |||  | ||| |||||||||||| |||||||||||    
T  33533885 tttaggtcccgtttggattgacttaattttgagtttatacaaaacaacttatgcaaatttataagcttcaaggtattattcataagttagtcaaggtagt 33533984  T
Q  225 ttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||||||||  | ||| ||||||||||||||| ||||||||    
T  33533985 ttatgaaaaaacagcccacgaatatacaattttcgttagtgagaact 33534031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 128 - 271
Target Start/End: Original strand, 40699316 - 40699463
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 227  Q
    ||||||||| ||||||| |||||  ||||||||||||||||  ||||||||||||||||| | ||||||||| |   |||||| | ||||||||||||||    
T  40699316 agggcccgtctggattggcttattattgagcttatgcaaaacagcttatgcaaataaataaatttttatgtagtgcgcataagcttgtcaaggtagttta 40699415  T
Q  228 tgaaaaaacag----cttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||||     |||||||||||||| ||||||| | ||||||||    
T  40699416 tgaaaaaacaaacatcttatgaagatacagttttcgtaagtgagaact 40699463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 153 - 271
Target Start/End: Original strand, 41228888 - 41229006
Alignment:
Q  153 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 252  Q
    ||||||||||||||||  |||||||||  ||||||| ||||||| || |||||||||| | || ||||||||||||||||||||| || |||||||||||    
T  41228888 ttgagcttatgcaaaacagcttatgcaggtaaataggcttttatttattattcataagcttgttaaggtagtttatgaaaaaacaactgatgaagataca 41228987  T
Q  253 attttcgttattgagaact 271  Q
    |||||| ||| | ||||||    
T  41228988 attttcattagttagaact 41229006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 7148775 - 7148875
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    |||||||||||||||||  |||||||||| |||||||||| | ||||||||||||| |||||||||||||||| || ||||||||||| ||| | |||||    
T  7148775 gcttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttttgaaaaaacagcttataaaaatacaattttctttagtcagaac 7148874  T
Q  271 t 271  Q
    |    
T  7148875 t 7148875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 126 - 271
Target Start/End: Complemental strand, 12495773 - 12495627
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaa--ggtag 223  Q
    |||||||| ||||||||||  |||| ||  |||||| ||||||  |||||||||||||||||  |||||||||| |||||||||| | |||||  |||||    
T  12495773 ttagggcctgtttggattgg-ttattttatagcttaagcaaaacagcttatgcaaataaataagcttttatgtattattcataagcttgtcaaaaggtag 12495675  T
Q  224 tttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||||||||||| || |||||||||| ||| ||| ||||||||    
T  12495674 tttatgaaaaaacagctaatcaagatacaatattcattagtgagaact 12495627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 17222852 - 17222932
Alignment:
Q  191 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||| |||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||    
T  17222852 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagattatgaagatacaattttcgttagttagaact 17222932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 131 - 271
Target Start/End: Complemental strand, 18424400 - 18424261
Alignment:
Q  131 gcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatga 230  Q
    ||||||||| |||||| ||| |||||||||||||||||    |||| ||||||||||  |||||||||| |||||||||  | || ||||||||||||||    
T  18424400 gcccgtttgaattgacatatttttgagcttatgcaaaacaatttatacaaataaataagcttttatgtattattcataaacttgtgaaggtagtttatga 18424301  T
Q  231 aaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
     ||||||  |||||||||||||||||| |||||||| ||||    
T  18424300 -aaaacaatttatgaagatacaatttttgttattgaaaact 18424261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 125 - 260
Target Start/End: Complemental strand, 42611997 - 42611862
Alignment:
Q  125 tttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttt-tatgtactattcataagttggtcaaggtag 223  Q
    |||||| || |||||||||| ||||| ||| |||||||||||||   ||||||||||||||||  |||| |||||| |||||||||| | ||| || |||    
T  42611997 tttaggccctgtttggattggcttattttttagcttatgcaaaacaacttatgcaaataaataagctttatatgtattattcataagcttgtcgag-tag 42611899  T
Q  224 tttatgaaaaaacagcttatgaagatacaattttcgt 260  Q
    |||||||||||||| |||||||||||||| |||||||    
T  42611898 tttatgaaaaaacaacttatgaagatacagttttcgt 42611862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 133 - 271
Target Start/End: Original strand, 15184512 - 15184649
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 232  Q
    ||||||||||| |||||| || ||||||||  ||||  ||||||| |||||||||   ||||||||| |||| |||| ||  | ||| ||||||||||||    
T  15184512 ccgtttggattaacttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataattttttaaag-tagtttatgaaa 15184610  T
Q  233 aaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  15184611 aaacagtttatgaagatacaattttcgttagtgagaact 15184649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 126 - 268
Target Start/End: Original strand, 19725251 - 19725393
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 225  Q
    |||||| ||||||||| | |||||| || |||||||| |||||  |||||||||| ||||||   ||||||||| |||| ||||||| || |||||| ||    
T  19725251 ttagggtccgtttggaataacttattttagagcttatacaaaacagcttatgcaattaaatacgtttttatgtattatttataagtttgttaaggtattt 19725350  T
Q  226 tatgaaaaaacagcttatgaagatacaattttcgttattgaga 268  Q
    |||||||||||||  |||||||||| ||||||| ||| |||||    
T  19725351 tatgaaaaaacagtctatgaagatataattttcattagtgaga 19725393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 23335645 - 23335745
Alignment:
Q  171 gcttatgcaaataaat-agacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaa 269  Q
    |||||||||||||||| ||| ||||||||| ||||||||||    |||||||||||||||||||||||||||||||||||||||||||| | | ||||||    
T  23335645 gcttatgcaaataaatgaga-ttttatgtattattcataagcatatcaaggtagtttatgaaaaaacagcttatgaagatacaattttcataagtgagaa 23335743  T
Q  270 ct 271  Q
    ||    
T  23335744 ct 23335745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 896973 - 897073
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    ||||||||||||||||| ||||||||||| |||||||||| | ||||| ||||||||||||||||||  ||| | |||||| |||||||||| ||| |||    
T  896973 gcttatgcaaataaataaacttttatgtattattcataagcttgtcaatgtagtttatgaaaaaacaatttacgtagatacgattttcgttagtgaaaac 897072  T
Q  271 t 271  Q
    |    
T  897073 t 897073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 132 - 271
Target Start/End: Complemental strand, 7206708 - 7206569
Alignment:
Q  132 cccgtttggattga-cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatga 230  Q
    |||||||||||||| ||||| |||||||||||||| ||  |||||||||||| ||||  ||||||| || ||||||  ||   || ||||||||||||||    
T  7206708 cccgtttggattgagcttat-tttgagcttatgcagaacagcttatgcaaatgaataagcttttatttattattcacgagcctgttaaggtagtttatga 7206610  T
Q  231 aaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||| |||||||||||| | ||||||||| ||||||||    
T  7206609 aaaaacaacttatgaagataaagttttcgttagtgagaact 7206569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 128 - 262
Target Start/End: Original strand, 35405644 - 35405778
Alignment:
Q  128 agggcccgttt-ggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttt 226  Q
    ||||||||||| |||||||||||| |||||||||||||||||   ||||| ||||||| || |  |||||||| ||| | |||  | ||||||  |||||    
T  35405644 agggcccgttttggattgacttatttttgagcttatgcaaaacaacttatacaaataacta-agatttatgtattatacttaatcttgtcaagacagttt 35405742  T
Q  227 atgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    |||||||||||||||||||||||| |||||||||||    
T  35405743 atgaaaaaacagcttatgaagatagaattttcgtta 35405778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 126 - 240
Target Start/End: Original strand, 8130446 - 8130560
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 225  Q
    |||||||| | |||||||| ||||| ||| ||| |||||||||  |||||||||||||||||  |||||||| | |||||||||||| |||| ||||| |    
T  8130446 ttagggcctggttggattggcttattttttagcatatgcaaaacagcttatgcaaataaataagcttttatgcattattcataagtttgtcagggtagct 8130545  T
Q  226 tatgaaaaaacagct 240  Q
    |||||| ||||||||    
T  8130546 tatgaacaaacagct 8130560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 153 - 271
Target Start/End: Complemental strand, 46704370 - 46704253
Alignment:
Q  153 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 252  Q
    ||||||||||| ||||   |||||||||||||  || ||||||| || ||||||| || | || |||||||||||||||||||||||||||||||||| |    
T  46704370 ttgagcttatgtaaaacaacttatgcaaataataag-cttttatttattattcatgagcttgttaaggtagtttatgaaaaaacagcttatgaagataaa 46704272  T
Q  253 attttcgttattgagaact 271  Q
    |||||| ||| ||||||||    
T  46704271 attttcattagtgagaact 46704253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 153 - 250
Target Start/End: Complemental strand, 213048 - 212952
Alignment:
Q  153 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagata 250  Q
    ||||||||||||||||   |||||||||||||||| | |||||| || |||||||||| | || ||||||||||||||||||||| ||||||||||||    
T  213048 ttgagcttatgcaaaacaacttatgcaaataaata-agttttatttattattcataagcttgttaaggtagtttatgaaaaaacaacttatgaagata 212952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 172 - 261
Target Start/End: Complemental strand, 27368234 - 27368145
Alignment:
Q  172 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtt 261  Q
    ||||||||||||||||  ||||||| || |||||||||||| ||||| |||| |||||||||||||| |||| ||||||||||| |||||    
T  27368234 cttatgcaaataaataagcttttatatattattcataagtttgtcaatgtagcttatgaaaaaacagtttataaagatacaattatcgtt 27368145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 172 - 268
Target Start/End: Complemental strand, 4603413 - 4603318
Alignment:
Q  172 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgaga 268  Q
    ||||||||||||||||   ||||||||| |||| |||| ||  | |||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  4603413 cttatgcaaataaataagtttttatgtattatttataatttttt-aaggtagtttatgaaaaaacagtttatgaagatacaattttcgttagtgaga 4603318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 36740907 - 36741007
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    |||||||||||||||||  ||||||| || ||| |||||| | ||||| |||||||||||||| |||| | ||||||||||||||||| ||| |||||||    
T  36740907 gcttatgcaaataaataagcttttatatattatgcataagcttgtcaaagtagtttatgaaaatacagttcatgaagatacaattttcattagtgagaac 36741006  T
Q  271 t 271  Q
    |    
T  36741007 t 36741007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 172 - 256
Target Start/End: Complemental strand, 39932836 - 39932752
Alignment:
Q  172 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattt 256  Q
    |||||||||||||||| ||||||||||| |||| ||||| | || |||||||| ||||||||||||  |||||||||||||||||    
T  39932836 cttatgcaaataaataaacttttatgtattatttataagattgttaaggtagtgtatgaaaaaacaatttatgaagatacaattt 39932752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 128 - 268
Target Start/End: Original strand, 47202786 - 47202925
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 227  Q
    |||||||||||||||| |||||| ||  |||||||  ||||  |||||||||||||||||   ||||||||| || | |||| ||  | |||||||||||    
T  47202786 agggcccgtttggattaacttattttatagcttatataaaacagcttatgcaaataaataagtttttatgtattacttataaattttt-aaggtagttta 47202884  T
Q  228 tgaaaaaacagcttatgaagatacaattttcgttattgaga 268  Q
    |||||||||   ||||||||||||||||||||||| |||||    
T  47202885 tgaaaaaaccatttatgaagatacaattttcgttagtgaga 47202925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 124 - 257
Target Start/End: Original strand, 32628737 - 32628867
Alignment:
Q  124 ctttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtag 223  Q
    |||| |||| ||||||||||| ||||| |||||||||||||||||  |||| || |||   |||  ||||| |||  |||||||||| | ||| |||||     
T  32628737 ctttggggctcgtttggattgtcttatttttgagcttatgcaaaacagcttttgaaaa---ataagcttttttgtgttattcataagcttgtcgaggtaa 32628833  T
Q  224 tttatgaaaaaacagcttatgaagatacaatttt 257  Q
    |||||||||||||||||| |||||||||||||||    
T  32628834 tttatgaaaaaacagcttgtgaagatacaatttt 32628867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 132 - 271
Target Start/End: Complemental strand, 42617351 - 42617213
Alignment:
Q  132 cccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 231  Q
    ||||||||||||  ||||| || |||||||| |||||  |||||||||||||||||   ||||| ||| |||| |||||||  | |||||||||||||||    
T  42617351 cccgtttggattagcttattttagagcttatacaaaacagcttatgcaaataaatacgtttttaagtattatttataagttttt-aaggtagtttatgaa 42617253  T
Q  232 aaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||| || |||||||||||  |||||||||| ||| ||||    
T  42617252 aaaatagtttatgaagatatgattttcgttagtgaaaact 42617213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 128 - 259
Target Start/End: Complemental strand, 46176104 - 46175974
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 227  Q
    ||||||| ||||||||  ||||| || ||||||||  ||||  |||||||||||||||||   ||||||||| |||| |||| ||  | |||||||||||    
T  46176104 agggcccatttggattagcttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataaattttt-aaggtagttta 46176006  T
Q  228 tgaaaaaacagcttatgaagatacaattttcg 259  Q
    |||||||| || ||||||||||||||||||||    
T  46176005 tgaaaaaatagtttatgaagatacaattttcg 46175974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 128 - 271
Target Start/End: Complemental strand, 52700669 - 52700527
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 227  Q
    |||| |||||||||||||||||| || ||||||||||||| |  |||||| |||||||||    |||||||| |||| ||||| | || || || |||||    
T  52700669 agggtccgtttggattgacttattttagagcttatgcaaacaa-cttatgtaaataaataagtctttatgtattatttataagcttgtaaaagtggttta 52700571  T
Q  228 tgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||| || |||||||||||| |||||||||| | ||||||    
T  52700570 tgaaaaaatagtttatgaagatacgattttcgttagtaagaact 52700527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 28663606 - 28663668
Alignment:
Q  201 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttat 263  Q
    |||||||||| | ||||||||||||||||||||||||| || |||||||||||||||||||||    
T  28663606 tattcataagcttgtcaaggtagtttatgaaaaaacagattctgaagatacaattttcgttat 28663668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 173 - 271
Target Start/End: Complemental strand, 55638162 - 55638064
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||||||| |  |||||||||| |||||||||||| || ||  |||||||||||||||||| |||| |||||||||| | ||||| ||||||||    
T  55638162 ttatgcaaataaacaagcttttatgtattattcataagtttgtaaatatagtttatgaaaaaacagtttataaagatacaatctccgttagtgagaact 55638064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 488467 - 488367
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    |||||||||||||| ||  |||||||||| |||| ||||| | ||||||||||||||||||||||  |||| | |||||||||||||  ||| |||||||    
T  488467 gcttatgcaaataagtaagcttttatgtattattaataagcttgtcaaggtagtttatgaaaaaattgcttgtaaagatacaatttttattagtgagaac 488368  T
Q  271 t 271  Q
    |    
T  488367 t 488367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 136 - 269
Target Start/End: Original strand, 22273761 - 22273881
Alignment:
Q  136 tttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa 235  Q
    ||||||||||||||| |||||||||||||| ||  |||||||||||||||||  ||||||          |||||||     ||||||||||||||||||    
T  22273761 tttggattgacttatttttgagcttatgcataatagcttatgcaaataaataagcttttaa---------ataagttt----aggtagtttatgaaaaaa 22273847  T
Q  236 cagcttatgaagatacaattttcgttattgagaa 269  Q
    |||||||||||||||||||||| |||| ||||||    
T  22273848 cagcttatgaagatacaatttttgttagtgagaa 22273881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 271
Target Start/End: Original strand, 15179778 - 15179920
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 227  Q
    ||||| ||||||||||  ||||| || ||| ||||  ||||  ||||||||||||||||| | ||||||||| |||| |||||||  | |||||||||||    
T  15179778 agggctcgtttggattagcttatattggagtttatataaaacagcttatgcaaataaatatatttttatgtattatttataagtt-tttaaggtagttta 15179876  T
Q  228 tgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||| |||  | ||||||| ||||||||||||||| | ||||||    
T  15179877 tgaagaaatggattatgaaaatacaattttcgttagtcagaact 15179920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 262
Target Start/End: Complemental strand, 22397388 - 22397297
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    |||||| |||||||||| |  || ||||| |||| ||||||  || ||||||||||||||||||||| |||||||| |||||||||||||||    
T  22397388 gcttatacaaataaataaatattaatgtattatttataagtctgttaaggtagtttatgaaaaaacaacttatgaatatacaattttcgtta 22397297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 127 - 257
Target Start/End: Complemental strand, 10795036 - 10794907
Alignment:
Q  127 tagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttt 226  Q
    ||||| ||||||| |||||||||| || ||||||||||||||  |||| || |||||||||   ||||||||| |||| | ||| | || ||||| ||||    
T  10795036 tagggtccgtttgaattgacttattttagagcttatgcaaaacagcttgtgtaaataaataagtttttatgtattatttaaaagctcgttaaggtggttt 10794937  T
Q  227 atgaaaaaacagcttatgaagatacaatttt 257  Q
    |||| |||| || ||||||||||||||||||    
T  10794936 atga-aaaatagtttatgaagatacaatttt 10794907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 18630932 - 18630878
Alignment:
Q  217 aaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||||||||||||||||||||||||||| | ||||||||| ||||||||    
T  18630932 aaggtagtttatgaaaaaacagcttatgaagataaagttttcgttagtgagaact 18630878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 34633359 - 34633429
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    ||||||||||||||||| ||||| ||| |||||||||||||   |||||||||||||||| ||||||||||    
T  34633359 agggcccgtttggattggcttattttttagcttatgcaaaacaacttatgcaaataaataaacttttatgt 34633429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 271
Target Start/End: Original strand, 22117320 - 22117456
Alignment:
Q  134 cgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 233  Q
    ||||||||||  ||||| || ||||||||  ||||   |||||||||||||||| | ||||||||| |||| |||||||  | |||||||||||||||||    
T  22117320 cgtttggattagcttattttagagcttatataaaacaacttatgcaaataaatacatttttatgtattatttataagtt-tttaaggtagtttatgaaaa 22117418  T
Q  234 aacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||  | ||||||| || |||||||||||| | ||||||    
T  22117419 aatgggttatgaaaatgcaattttcgttagtcagaact 22117456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 134 - 258
Target Start/End: Complemental strand, 2494520 - 2494396
Alignment:
Q  134 cgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 233  Q
    ||||||||||| ||||| || || |||||||||||  | ||||| ||||| |||  ||||||  || |||| ||||| | || |||||||||||||||||    
T  2494520 cgtttggattgccttatattagatcttatgcaaaatagtttatgtaaatagataagcttttacatattatttataagcttgtaaaggtagtttatgaaaa 2494421  T
Q  234 aacagcttatgaagatacaattttc 258  Q
    || || |||||||||||| ||||||    
T  2494420 aatagtttatgaagataccattttc 2494396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 135 - 258
Target Start/End: Complemental strand, 2702834 - 2702711
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagactttta-tgtactattcataagttggtcaaggtagtttatgaaaa 233  Q
    |||||||||| ||||| || |||||||||||||   ||||||||| ||||||| | | ||| |||| |||| ||||||| || ||||||||| |||||||    
T  2702834 gtttggattggcttattttagagcttatgcaaagcagcttatgcacataaata-agtattagtgtattatttataagtttgttaaggtagttaatgaaaa 2702736  T
Q  234 aacagcttatgaagatacaattttc 258  Q
     ||| |||||||| |||||||||||    
T  2702735 gacaacttatgaatatacaattttc 2702711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 3564383 - 3564319
Alignment:
Q  134 cgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    ||||||||||||||||| |||||||||||| ||||  |||||||||||||||||  |||||||||    
T  3564383 cgtttggattgacttatttttgagcttatgaaaaatagcttatgcaaataaataatcttttatgt 3564319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 203 - 271
Target Start/End: Complemental strand, 36255087 - 36255019
Alignment:
Q  203 ttcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||| | ||||| ||||||| ||||||||||||||||||||||||||||||  ||| ||||||||    
T  36255087 ttcataagcttgtcaacgtagtttgtgaaaaaacagcttatgaagatacaattttaattagtgagaact 36255019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 262
Target Start/End: Original strand, 825685 - 825776
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    |||||||||||||||||  ||||| | || ||||||||||   ||| || |||||||||||||||||||| ||||||||||| |||| ||||    
T  825685 gcttatgcaaataaataagcttttctatattattcataagcctgtctagttagtttatgaaaaaacagctcatgaagatacattttttgtta 825776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 258
Target Start/End: Original strand, 2141644 - 2141731
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttc 258  Q
    |||||||||||||||||  |||||||||  |||| |||| || || ||||||  |||| ||||||||| |||||||||||||||||||    
T  2141644 gcttatgcaaataaataagcttttatgtgttatttataactttgttaaggtatattataaaaaaacagtttatgaagatacaattttc 2141731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 191 - 258
Target Start/End: Complemental strand, 21216391 - 21216324
Alignment:
Q  191 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttc 258  Q
    ||||||||| |||||||||| | |||||||||||||||||||||  || |||||||| ||||||||||    
T  21216391 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaagtaggttatgaagctacaattttc 21216324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 46650276 - 46650371
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgaga 268  Q
    |||||||||||||||  |||| ||||| ||||||||| || || |  |||||||||||||||| || |||| |||| ||||||||||||| |||||    
T  46650276 ttatgcaaataaataagctttcatgtattattcataaatttgtaattgtagtttatgaaaaaatagtttataaagaaacaattttcgttagtgaga 46650371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 133 - 262
Target Start/End: Original strand, 3966695 - 3966823
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 232  Q
    |||||||||||  ||||| || | ||||||  ||||  ||||||||||||||||| | ||||||||| | ||||||||||  ||||| || |||||| ||    
T  3966695 ccgtttggattagcttattttagggcttatataaaatggcttatgcaaataaataaatttttatgtattgttcataagtt-ttcaagctattttatggaa 3966793  T
Q  233 aaacagcttatgaagatacaattttcgtta 262  Q
    |||||| |||||||||| |  |||||||||    
T  3966794 aaacaggttatgaagatgcggttttcgtta 3966823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 42153066 - 42153135
Alignment:
Q  129 gggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    |||||||||||||||| ||||| |||||||||| | ||||  |||||||||||||||||  |||||||||    
T  42153066 gggcccgtttggattggcttatttttgagcttacgtaaaatagcttatgcaaataaataagcttttatgt 42153135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 214 - 266
Target Start/End: Original strand, 10046278 - 10046330
Alignment:
Q  214 gtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattga 266  Q
    ||||| ||||||||| ||||||||| ||||||| |||||||||||||||||||    
T  10046278 gtcaatgtagtttataaaaaaacaggttatgaaaatacaattttcgttattga 10046330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 171 - 262
Target Start/End: Original strand, 8601204 - 8601295
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    ||||||||||||||||   ||||| | || |||| |||||   ||||| ||||||||||||||||| | |||||||||||||||||| ||||    
T  8601204 gcttatgcaaataaatgagcttttttctattatttataagcctgtcaatgtagtttatgaaaaaactggttatgaagatacaatttttgtta 8601295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 128 - 262
Target Start/End: Original strand, 30956643 - 30956777
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaat-agacttttatgtactattcataagttggtcaaggtagttt 226  Q
    ||||||||||||| ||||||||| ||| || |||||||||||  ||| | ||||||||| ||  ||||||||| || ||| ||| |  ||||||||||||    
T  30956643 agggcccgtttgggttgacttattttttagtttatgcaaaaa-acttgtacaaataaataagctttttatgtattactcacaagcttctcaaggtagttt 30956741  T
Q  227 atgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    |||||||||| | ||| |||||| || |||| ||||    
T  30956742 atgaaaaaacggtttacgaagatccagtttttgtta 30956777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 191 - 262
Target Start/End: Original strand, 35010234 - 35010305
Alignment:
Q  191 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    ||||||||| |||| ||||||| ||||| ||||||||||| |||| || |||| ||||||||| ||||||||    
T  35010234 ttttatgtattatttataagtttgtcaacgtagtttatgataaaatagtttataaagatacaagtttcgtta 35010305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 39931581 - 39931530
Alignment:
Q  217 aaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgaga 268  Q
    ||||||||||||||||||||   ||||||||||||||||||||||| |||||    
T  39931581 aaggtagtttatgaaaaaaccatttatgaagatacaattttcgttagtgaga 39931530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 135 - 250
Target Start/End: Complemental strand, 43415408 - 43415293
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 234  Q
    ||||| |||||||||| |||||||||| | ||||   ||| ||||||||||||   ||||||||| |||||||||| | || || |||||||| ||||||    
T  43415408 gtttgaattgacttatttttgagcttaagtaaaacaacttctgcaaataaataagtttttatgtattattcataaggttgttaatgtagtttacgaaaaa 43415309  T
Q  235 acagcttatgaagata 250  Q
    |||  |||| ||||||    
T  43415308 acaatttatcaagata 43415293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 236
Target Start/End: Original strand, 4331300 - 4331405
Alignment:
Q  133 ccgtttggattgacttatctttg--agcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatga 230  Q
    |||||||||||||||||| |||   ||||||| |||||  |||||  |  |||||||  ||||||| || ||||||||| || |||||||||||||||||    
T  4331300 ccgtttggattgacttatattttttagcttatacaaaacagcttacactgataaataagcttttatttattattcataactttgtcaaggtagtttatga 4331399  T
Q  231 aaaaac 236  Q
    ||||||    
T  4331400 aaaaac 4331405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 271
Target Start/End: Complemental strand, 26206435 - 26206337
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||||||||    |||||||| |||| ||||| | || || ||||||||||||||||||| |||||||  ||| |||||||||| | ||||||    
T  26206435 ttatgcaaataaatatgtctttatgtattatttataagattgttaacgtagtttatgaaaaaacagtttatgaatgtactattttcgttagtaagaact 26206337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 30956866 - 30956808
Alignment:
Q  129 gggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 187  Q
    |||||||| ||||||||||||| ||| |||||||| ||||  |||||||||||||||||    
T  30956866 gggcccgtatggattgacttattttttagcttatgaaaaatagcttatgcaaataaata 30956808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 48687116 - 48687047
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    |||||| |||||||||| ||||| |||||||||||| ||||  ||||||||||||||||| |||| |||||    
T  48687116 agggcctgtttggattgccttatttttgagcttatg-aaaatagcttatgcaaataaataaacttatatgt 48687047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 126 - 187
Target Start/End: Original strand, 48591325 - 48591386
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 187  Q
    |||||| || ||||||||| ||||| |||||||||||| ||||  |||||||||||||||||    
T  48591325 ttagggtccatttggattggcttatttttgagcttatgaaaaatagcttatgcaaataaata 48591386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 193 - 257
Target Start/End: Original strand, 2405213 - 2405276
Alignment:
Q  193 ttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaatttt 257  Q
    ||||||| |||| ||||| | ||||| |||||||||||||||| |||||||| ||||||||||||    
T  2405213 ttatgtattatt-ataagcttgtcaatgtagtttatgaaaaaatagcttatgtagatacaatttt 2405276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 7148953 - 7148886
Alignment:
Q  129 gggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatg 197  Q
    |||| ||||||||||||||||| | |||||||||| ||||  |||||||||||||||||  ||||||||    
T  7148953 gggctcgtttggattgacttatttctgagcttatg-aaaatagcttatgcaaataaataagcttttatg 7148886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 262
Target Start/End: Original strand, 9201609 - 9201744
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 225  Q
    |||||| |||||||||||  ||||| || ||| ||||  ||||   ||||||||||||||||   ||||||||| |||| |||||||  ||||| || ||    
T  9201609 ttagggtccgtttggattagcttattttagagtttatataaaataacttatgcaaataaataagtttttatgtattatttataagtt-ttcaagctattt 9201707  T
Q  226 tatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    |||| |||||||| ||||||||||   ||||||||||    
T  9201708 tatggaaaaacaggttatgaagatgtgattttcgtta 9201744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 9319100 - 9319151
Alignment:
Q  220 gtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||||||||||||| |||||||| |||||||||| ||| ||| ||||    
T  9319100 gtagtttatgaaaaaacagtttatgaagctacaattttcattactgaaaact 9319151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 28663402 - 28663441
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaa 167  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  28663402 agggtccgtttggattgacttatttttgagcttatgcaaa 28663441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 260
Target Start/End: Original strand, 31022457 - 31022492
Alignment:
Q  225 ttatgaaaaaacagcttatgaagatacaattttcgt 260  Q
    ||||||||||||||||||| ||||||||||||||||    
T  31022457 ttatgaaaaaacagcttataaagatacaattttcgt 31022492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 209
Target Start/End: Complemental strand, 31736486 - 31736431
Alignment:
Q  154 tgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataa 209  Q
    |||||||||||||||   |||||| ||||||||| | |||||||||||||||||||    
T  31736486 tgagcttatgcaaaacaacttatgtaaataaataaaattttatgtactattcataa 31736431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 262
Target Start/End: Complemental strand, 43983465 - 43983374
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    |||||| ||||||||||  | || ||||| |||| ||||| | || ||| |||||||| |||||||| ||||| || |||||||||||||||    
T  43983465 gcttatacaaataaataagcattaatgtattatttataagcttgttaagatagtttataaaaaaacaacttataaacatacaattttcgtta 43983374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 254
Target Start/End: Original strand, 45018556 - 45018619
Alignment:
Q  191 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaat 254  Q
    |||||| || ||||||| || | || || |||||||||||||||||| ||||||||||||||||    
T  45018556 ttttatttattattcatgagattgttaaagtagtttatgaaaaaacaacttatgaagatacaat 45018619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 271
Target Start/End: Complemental strand, 2548080 - 2548030
Alignment:
Q  221 tagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||||||||||  ||||||||||| |||||||| || ||||||||    
T  2548080 tagtttatgaaaaaacaatttatgaagataaaattttcgctaatgagaact 2548030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 153 - 271
Target Start/End: Complemental strand, 8057189 - 8057071
Alignment:
Q  153 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 252  Q
    ||||||||||| ||||   || ||||||| |||||   |||||| || |||||||||| | |||||||||| ||| ||||||||   |||||||||||||    
T  8057189 ttgagcttatgaaaaataactaatgcaaaaaaataagtttttatttattattcataagcttgtcaaggtagcttaagaaaaaacgatttatgaagataca 8057090  T
Q  253 attttcgttattgagaact 271  Q
    || || |||  ||||||||    
T  8057089 atatttgttcgtgagaact 8057071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 127 - 257
Target Start/End: Original strand, 10796345 - 10796474
Alignment:
Q  127 tagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttt 226  Q
    ||||| ||||||| |||| ||||| || ||||||||||||||   ||| || |||||||||   ||||||||| |||| | ||| | || ||| | ||||    
T  10796345 tagggtccgtttgaattggcttattttagagcttatgcaaaacaacttgtgtaaataaataagtttttatgtattatttaaaagctcgttaagatggttt 10796444  T
Q  227 atgaaaaaacagcttatgaagatacaatttt 257  Q
    ||| ||||| || ||||||||||||||||||    
T  10796445 atg-aaaaatagtttatgaagatacaatttt 10796474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 271
Target Start/End: Complemental strand, 11256693 - 11256644
Alignment:
Q  221 tagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||||||| |||||||||||||||||||||| ||||  |||||||    
T  11256693 tagtttatgaaaaa-cagcttatgaagatacaattttagttagcgagaact 11256644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 12495552 - 12495606
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 187  Q
    |||||||||||| ||||| |||||||||||| |||   |||||||||||||||||    
T  12495552 ccgtttggattgtcttatttttgagcttatgaaaagtagcttatgcaaataaata 12495606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 212
Target Start/End: Complemental strand, 29996758 - 29996681
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagtt 212  Q
    |||||| ||||||||| |||||| || |||||||    |||||||||||||||  ||||||| || ||||||||||||    
T  29996758 gtttggtttgacttatttttgagtttttgcaaaacaatttatgcaaataaataagcttttatatattattcataagtt 29996681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 198
Target Start/End: Complemental strand, 35405869 - 35405796
Alignment:
Q  125 tttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    |||||||||||||  || || ||||| ||| |||||||| ||||  |||||||||||||||||  |||||||||    
T  35405869 tttagggcccgttatgaatggcttattttttagcttatgaaaaatagcttatgcaaataaataagcttttatgt 35405796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 48238188 - 48238135
Alignment:
Q  202 attcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaatt 255  Q
    |||||||||||  |||| ||| |||||||||||||| |||||||| ||||||||    
T  48238188 attcataagtttatcaaagtattttatgaaaaaacaacttatgaaaatacaatt 48238135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 198
Target Start/End: Complemental strand, 48667848 - 48667783
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    |||||||||||| ||||| ||| |||| ||| ||||  |||||||||||||||||  |||||||||    
T  48667848 ccgtttggattggcttatttttaagctcatgaaaaatagcttatgcaaataaataagcttttatgt 48667783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 11298741 - 11298697
Alignment:
Q  152 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttat 196  Q
    |||||||||||| ||||  ||||||||||||||||| ||||||||    
T  11298741 tttgagcttatgaaaaatagcttatgcaaataaataaacttttat 11298697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 17223005 - 17222953
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 187  Q
    |||||||||| ||||| |||||||||||| ||||  |||||| ||||||||||    
T  17223005 gtttggattggcttatttttgagcttatgaaaaatagcttattcaaataaata 17222953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 36741080 - 36741028
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 187  Q
    |||||||||| ||||| ||| |||||||| ||||  |||||||||||||||||    
T  36741080 gtttggattggcttattttttagcttatgaaaaatagcttatgcaaataaata 36741028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 132 - 198
Target Start/End: Original strand, 38345730 - 38345795
Alignment:
Q  132 cccgtttggattgacttatctttgagcttatgcaaaaat-gcttatgcaaataaatagacttttatgt 198  Q
    ||||||||||||| ||||| |||||||||||  |||||| ||||||| |||||||||  |||||||||    
T  38345730 cccgtttggattggcttatttttgagcttat--aaaaatagcttatgtaaataaataagcttttatgt 38345795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370 (Bit Score: 89; Significance: 1e-42; HSPs: 2)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 275 - 577
Target Start/End: Original strand, 13779 - 14092
Alignment:
Q  275 gttagaatggaacaataatacggctttcccagaagattatgagtagaaggttctgcattcattagagagacgacaaactaagtggagatgg--------- 365  Q
    |||||||||||||| || || |||||||| ||||||||||||| ||||| |||| || |||||||||||||||||| ||||||||||||||             
T  13779 gttagaatggaacagtagtaaggctttccgagaagattatgagaagaagattctacaatcattagagagacgacaa-ctaagtggagatgggagaagaag 13877  T
Q  366 -----acaaatcatgtagtattatgcatttgtgatggtgggagcaaaaagttggaagattattaactgtacatgttattctgttaaaattataagcaacg 460  Q
         | ||||| || |||| ||||||| ||| |||||||||| |||  |||| || ||| | || |||||||||||||||| | ||||  ||||||||     
T  13878 acctgataaatcttgcagtactatgcatctgtaatggtgggaggaaat-gttgaaatattgt-aagtgtacatgttattctgctgaaatagtaagcaaca 13975  T
Q  461 atacattaacaaaatttgcatacatgaaaccatgttg--tatatggcttgctttctctttaacccctaaaccagttaagtataagatgaaggatcattat 558  Q
     ||||||||||||||||||||||||||||||||||||  ||||||||||||||| | |||||| || ||||| ||||||||||||| |||| ||| || |    
T  13976 gtacattaacaaaatttgcatacatgaaaccatgttgtatatatggcttgcttt-tttttaacacc-aaacctgttaagtataagacgaagaatcgttct 14073  T
Q  559 aatgtaaaaattgtagcat 577  Q
    |||||||||||||||||||    
T  14074 aatgtaaaaattgtagcat 14092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 479 - 577
Target Start/End: Original strand, 8704 - 8802
Alignment:
Q  479 catacatgaaaccatgttgtatat--ggcttgctttctctttaacccctaaaccagttaagtataagatgaaggatcattataatgtaaaaattgtagca 576  Q
    ||||||||||||||||||||||||  |||||||||| | |||||| || ||||| ||||||||||||| |||| ||| || |||||||||||||||||||    
T  8704 catacatgaaaccatgttgtatatatggcttgcttttt-tttaacacc-aaacctgttaagtataagacgaagaatcgttctaatgtaaaaattgtagca 8801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 2e-38; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 4026904 - 4027028
Alignment:
Q  146 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 245  Q
    ||||| ||||||||||||||||| ||||||||||||||||||  |||||||||| ||| |||||| | ||||||||||||||||||||||||||||||||    
T  4026904 cttatttttgagcttatgcaaaactgcttatgcaaataaataagcttttatgtattat-cataagcttgtcaaggtagtttatgaaaaaacagcttatga 4027002  T
Q  246 agatacaattttcgttattgagaact 271  Q
    |||||||||||| |||| ||||||||    
T  4027003 agatacaatttttgttagtgagaact 4027028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 131 - 271
Target Start/End: Original strand, 38215986 - 38216122
Alignment:
Q  131 gcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatga 230  Q
    |||||||||||||||||||| |||||||||||||||||  |||||||||||||||||     ||||||| |||||||||| | |||||||||||||| ||    
T  38215986 gcccgtttggattgacttatttttgagcttatgcaaaacagcttatgcaaataaataa----ttatgtattattcataagcttgtcaaggtagtttagga 38216081  T
Q  231 aaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||| ||| |||||||||||||||||||||| ||||||||    
T  38216082 aaaaatagcatatgaagatacaattttcgttagtgagaact 38216122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 128 - 271
Target Start/End: Original strand, 29774705 - 29774848
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 227  Q
    ||||||||||||| ||| ||||| ||| |||||||||| ||   |||||||||||||||| ||||||||| | ||||||| |||| || |||||||||||    
T  29774705 agggcccgtttgggttgtcttattttttagcttatgcataacaacttatgcaaataaataaacttttatgcattattcattagtttgttaaggtagttta 29774804  T
Q  228 tgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||| ||||||||| ||||||||||||||| ||||||||    
T  29774805 tgaaaaaacggcttatgaaaatacaattttcgttagtgagaact 29774848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 131 - 271
Target Start/End: Original strand, 4090452 - 4090592
Alignment:
Q  131 gcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatga 230  Q
    |||||| || |||| ||||| |||||||||||||||||  ||||||||||||||||| ||||| ||||| |||||||||  | |||||||||||  ||||    
T  4090452 gcccgtctgaattggcttatttttgagcttatgcaaaacagcttatgcaaataaataaactttgatgtattattcataatcttgtcaaggtagtcaatga 4090551  T
Q  231 aaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||||| |||||||||||||||||||  |||||||    
T  4090552 aaaaacagcttacgaagatacaattttcgttaccgagaact 4090592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 127 - 271
Target Start/End: Complemental strand, 25836839 - 25836695
Alignment:
Q  127 tagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttt 226  Q
    |||||||| |||| |||| ||||| ||||||| |  ||||||  |||||||||||||||||  |||||||||| |||||||||| | |||||||||||||    
T  25836839 tagggcccatttgaattgccttatttttgagcctgcgcaaaacagcttatgcaaataaatatgcttttatgtattattcataagcttgtcaaggtagttt 25836740  T
Q  227 atgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||| ||||||||||| |||||| |||||| ||||||||    
T  25836739 atgaaaaaacggcttatgaagacacaattatcgttagtgagaact 25836695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 152 - 268
Target Start/End: Complemental strand, 33321414 - 33321298
Alignment:
Q  152 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 251  Q
    |||||||||||||||||   ||| ||||||||||||  |||||||||  |||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  33321414 tttgagcttatgcaaaacaacttgtgcaaataaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatac 33321315  T
Q  252 aattttcgttattgaga 268  Q
    |||||| |||| |||||    
T  33321314 aatttttgttagtgaga 33321298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 135 - 256
Target Start/End: Complemental strand, 2790190 - 2790068
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaataga-cttttatgtactattcataagttggtcaaggtagtttatgaaaa 233  Q
    |||||| ||| ||||| |||||||||||||||||  ||||||||||||||||| | |||||||| | |||| ||||| | ||||||||| |||||||| |    
T  2790190 gtttgggttggcttatttttgagcttatgcaaaacagcttatgcaaataaataaagcttttatgcattattgataagcttgtcaaggtattttatgaata 2790091  T
Q  234 aacagcttatgaagatacaattt 256  Q
    |||||||||||||||||||||||    
T  2790090 aacagcttatgaagatacaattt 2790068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 191 - 275
Target Start/End: Complemental strand, 36501578 - 36501494
Alignment:
Q  191 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaactcatg 275  Q
    ||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||    
T  36501578 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagataaaatttgcgttagtgagaactcatg 36501494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 130 - 268
Target Start/End: Original strand, 21788419 - 21788557
Alignment:
Q  130 ggcccgtttggattga-cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttat 228  Q
    |||| ||||||||||| ||||| |||||| ||||||||||   ||||||||||||||||  ||||||| || |||||||||| | || ||| ||||||||    
T  21788419 ggcctgtttggattgagcttat-tttgagtttatgcaaaacatcttatgcaaataaataagcttttatttattattcataagcttgttaagatagtttat 21788517  T
Q  229 gaaaaaacagcttatgaagatacaattttcgttattgaga 268  Q
    ||||||||| |||||||||||| ||||||||||| |||||    
T  21788518 gaaaaaacaacttatgaagataaaattttcgttagtgaga 21788557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 128 - 271
Target Start/End: Complemental strand, 755867 - 755724
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 227  Q
    |||||||||||||||||  || | |||||||||||||||||   |||| |||||||| ||  |||||||||| |||||| ||| | || | |||||||||    
T  755867 agggcccgtttggattggatttt-tttgagcttatgcaaaacaacttacgcaaataattaagcttttatgtattattcagaagcttgttacggtagttta 755769  T
Q  228 tgaaaaaa-cagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||| |||||||||||||||||||||| |||| ||||||||    
T  755768 tgaaaaaaacagcttatgaagatacaatttttgttagtgagaact 755724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 172 - 271
Target Start/End: Original strand, 4004823 - 4004922
Alignment:
Q  172 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||||||||||  ||||||||||||||||||||| |  | || |||||||||||||| ||| ||||||||| |||||||||||||| ||||||||    
T  4004823 cttatgcaaataaataatcttttatgtactattcataagctttttaaagtagtttatgaaaatacaacttatgaagctacaattttcgttagtgagaact 4004922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 128 - 271
Target Start/End: Original strand, 11776944 - 11777087
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 227  Q
    |||||| |||||||||||||||| ||  |||  ||| ||||  ||||||||| |||||||  |||||||||| |||| ||||| | || ||| |||||||    
T  11776944 agggcctgtttggattgacttattttaaagcgcatgtaaaacagcttatgcatataaataagcttttatgtattatttataagcttgttaagttagttta 11777043  T
Q  228 tgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||| |||||||||||||||||| |||| |||| ||||||||    
T  11777044 tgaaaacacagcttatgaagatacactttttgttagtgagaact 11777087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 13056440 - 13056310
Alignment:
Q  141 attgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagct 240  Q
    |||| ||||| ||| |||| ||||||||  | ||||||||||| |||  |||||||||| | |||||||| | ||||||||||||||| |||||| ||||    
T  13056440 attggcttattttttagctcatgcaaaacggattatgcaaatagataagcttttatgtatttttcataagcttgtcaaggtagtttataaaaaaatagct 13056341  T
Q  241 tatgaagatacaattttcgttattgagaact 271  Q
    ||||||||| ||||||||||||  |||||||    
T  13056340 tatgaagatgcaattttcgttaacgagaact 13056310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 125 - 239
Target Start/End: Complemental strand, 33321532 - 33321418
Alignment:
Q  125 tttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 224  Q
    ||||||||| |||| ||||||||||| ||| |||||||||||||   ||||||||||||| ||   ||||||||| || ||||||| | |||||||||||    
T  33321532 tttagggcctgtttcgattgacttattttttagcttatgcaaaacaacttatgcaaataattaagtttttatgtattactcataagcttgtcaaggtagt 33321433  T
Q  225 ttatgaaaaaacagc 239  Q
    |||||||||||||||    
T  33321432 ttatgaaaaaacagc 33321418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 34913491 - 34913401
Alignment:
Q  153 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttat 243  Q
    ||||||||||||||||  |||||||||||||||||  |||||||||| |||||||||||| || ||| ||||||||||||||||| |||||    
T  34913491 ttgagcttatgcaaaacagcttatgcaaataaataagcttttatgtattattcataagtttgttaagatagtttatgaaaaaacaacttat 34913401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 126 - 271
Target Start/End: Complemental strand, 38471919 - 38471774
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 225  Q
    |||||||  |||||||||  ||||| || ||||||||||||||  |||||||||||||||||  |||||||||  |||  ||||| |  |  | ||||||    
T  38471919 ttagggcttgtttggattagcttattttcgagcttatgcaaaacagcttatgcaaataaatatgcttttatgtgttatgtataagcttcttgatgtagtt 38471820  T
Q  226 tatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||    
T  38471819 tatgaaaaaacagtttatgaaggtacaattttcgttagtgagaact 38471774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 128 - 271
Target Start/End: Original strand, 37409603 - 37409746
Alignment:
Q  128 agggcccgtttggatt-gacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttt 226  Q
    |||||||||||||||| | ||||| ||||||| |||||||||   ||||||||||||||||  |||||| ||| |||||   |||| ||||| |||||||    
T  37409603 agggcccgtttggattagtcttat-tttgagcgtatgcaaaacaacttatgcaaataaataagcttttaagtattattctctagtttgtcaatgtagttt 37409701  T
Q  227 atgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||||  ||||||| |||||||||| |||||||| ||||    
T  37409702 atgaaaaaacaatttatgaaaatacaatttttgttattgaaaact 37409746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 171 - 258
Target Start/End: Original strand, 887415 - 887502
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttc 258  Q
    |||||||||||||||||  ||||| |||| |||||||||| | |||||||||||||||| |||| | |||||||||||||||||||||    
T  887415 gcttatgcaaataaataagcttttttgtattattcataagcttgtcaaggtagtttatgtaaaacctgcttatgaagatacaattttc 887502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 12223855 - 12223955
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    |||| ||||||||| ||  |||| ||||| ||||||||||   ||||||||||||||||||||||||| |||||||||||| |||||| ||| |||||||    
T  12223855 gcttttgcaaataagtaacctttcatgtattattcataagcctgtcaaggtagtttatgaaaaaacagtttatgaagataccattttcattagtgagaac 12223954  T
Q  271 t 271  Q
    |    
T  12223955 t 12223955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 273 - 365
Target Start/End: Original strand, 38638830 - 38638921
Alignment:
Q  273 atgttagaatggaacaataatacggctttcccagaagattatgagtagaaggttctgcattcattagagagacgacaaactaagtggagatgg 365  Q
    |||||| ||||||| ||||||| |||||||  ||||||||||||| |||||||||| || |||||||||||||||  ||||||||||||||||    
T  38638830 atgttaaaatggaataataataaggctttcagagaagattatgagaagaaggttctacaatcattagagagacga-gaactaagtggagatgg 38638921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 152 - 271
Target Start/End: Complemental strand, 29133769 - 29133650
Alignment:
Q  152 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 251  Q
    |||||||||||  ||||  | |||||||||||||||  |||||||||| |||||||||||| ||||  || |||| || |||||||| |||| |||||||    
T  29133769 tttgagcttatataaaatagtttatgcaaataaataatcttttatgtattattcataagtttgtcactgtggtttgtggaaaaacagtttataaagatac 29133670  T
Q  252 aattttcgttattgagaact 271  Q
    ||||||||||| ||| ||||    
T  29133669 aattttcgttaatgaaaact 29133650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 2757202 - 2757087
Alignment:
Q  121 tagctttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaagg 220  Q
    |||||| |||||| |||||||||||||||| || ||||||||  ||||  ||||||||||||||||| | ||||||||| |||| |||||||  | || |    
T  2757202 tagcttgagggccagtttggattgacttattttagagcttatataaaacagcttatgcaaataaata-agttttatgtattatttataagtt-tttaaag 2757105  T
Q  221 tagtttatgaaaaaacag 238  Q
    ||||||||||||||||||    
T  2757104 tagtttatgaaaaaacag 2757087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 135 - 268
Target Start/End: Original strand, 5903500 - 5903633
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 234  Q
    ||||| || ||||||| |||||||| ||||||||   |||||||||||||| |  | ||  |||| || ||||||| | ||||| |||||| ||||||||    
T  5903500 gtttgaatcgacttatttttgagctaatgcaaaacaacttatgcaaataaacaagcattagtgtattactcataagcttgtcaaagtagttaatgaaaaa 5903599  T
Q  235 acagcttatgaagatacaattttcgttattgaga 268  Q
    ||| ||||||||||||||||||| |||| |||||    
T  5903600 acatcttatgaagatacaatttttgttagtgaga 5903633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 126 - 269
Target Start/End: Original strand, 13097874 - 13098019
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaataga-cttttatgtacta-ttcataagttggtcaaggtag 223  Q
    |||||||| |||||||||| ||||| |||||||||||||||||  ||||||| ||| ||| | | |||| ||||| || |||||||| | ||||| || |    
T  13097874 ttagggcctgtttggattggcttatttttgagcttatgcaaaacagcttatggaaaaaaaaaaagctttgatgtattatttcataagcttgtcaaagttg 13097973  T
Q  224 tttatgaaaaaacagcttatgaagatacaattttcgttattgagaa 269  Q
    |||||||||||||| |||||||||| | |||| | |||| ||||||    
T  13097974 tttatgaaaaaacaacttatgaagagaaaattattgttagtgagaa 13098019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 32522174 - 32522038
Alignment:
Q  125 tttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 224  Q
    ||||||| |||||||||||   |||| || ||||||||  ||||  ||||||| |||||||||   ||||||||| |||| |||| ||  | ||||||||    
T  32522174 tttagggtccgtttggattagtttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataatttttt-aaggtagt 32522076  T
Q  225 ttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    |||||||||||||| | |||||||||||||||||||||    
T  32522075 ttatgaaaaaacagttcatgaagatacaattttcgtta 32522038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 135 - 271
Target Start/End: Complemental strand, 12683725 - 12683589
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 234  Q
    ||||| |||| ||||| ||| |||| | ||||||  | |||||||||||||||   ||| ||||| |||||||||| | ||||  | | |||| ||||||    
T  12683725 gtttgtattggcttatttttaagctgacgcaaaacagattatgcaaataaataagttttaatgtattattcataagcttgtcagagaaatttacgaaaaa 12683626  T
Q  235 acagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  12683625 acagcttatgaagatacaattttggttactgagaact 12683589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 273 - 365
Target Start/End: Original strand, 38634705 - 38634796
Alignment:
Q  273 atgttagaatggaacaataatacggctttcccagaagattatgagtagaaggttctgcattcattagagagacgacaaactaagtggagatgg 365  Q
    ||||||||||||||||| |||| | |||||| ||||||||||||| | ||||||| ||| |||||||||||||| | |||||||| |||||||    
T  38634705 atgttagaatggaacaacaataagactttccgagaagattatgagaaaaaggttcggcaatcattagagagacggc-aactaagtagagatgg 38634796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 257
Target Start/End: Complemental strand, 43787884 - 43787800
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaatttt 257  Q
    |||| |||||||||| ||||||||||| |||||||||  | ||  |||||| ||||||||||||| |||||||||||||||||||    
T  43787884 ttatacaaataaataaacttttatgtattattcataaacttgtttaggtagcttatgaaaaaacaacttatgaagatacaatttt 43787800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 271
Target Start/End: Complemental strand, 2401747 - 2401605
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 227  Q
    ||||| ||||||||||  ||||| || ||||||||  ||||  ||||||||||||||||| | ||||||||| | || |||||||  | |||||||||||    
T  2401747 agggctcgtttggattagcttattttagagcttatataaaacagcttatgcaaataaatatatttttatgtattgtttataagtt-tttaaggtagttta 2401649  T
Q  228 tgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||  | ||||||| |||||||||| |||| | ||||||    
T  2401648 tgaaaaaatgggttatgaaaatacaatttttgttagtcagaact 2401605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 271
Target Start/End: Complemental strand, 7481021 - 7480882
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtact----attcataagttggtcaaggtagtttatga 230  Q
    |||||||| ||||||| ||||| |||||||||||   ||||||||||||||||   |||||| || |    ||||||||||| || |||||||||||| |    
T  7481021 gtttggatcgacttatttttgaacttatgcaaaacaacttatgcaaataaataatattttatatattattcattcataagtttgtgaaggtagtttat-a 7480923  T
Q  231 aaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||| |||| ||||||||||||||| ||| | ||||||    
T  7480922 aaaaacaacttaggaagatacaattttcattagtcagaact 7480882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 32366117 - 32366243
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 234  Q
    |||||||||  ||||| || ||||||||  ||||   ||||||||||||||||   ||||||||| |||| |||||||  | ||||||||||||||||||    
T  32366117 gtttggattagcttattttagagcttatataaaataacttatgcaaataaataagtttttatgtattatttataagttt-taaaggtagtttatgaaaaa 32366215  T
Q  235 acagcttatgaagatacaattttcgtta 262  Q
    |||| ||||||| |||| ||||||||||    
T  32366216 acagtttatgaatatacgattttcgtta 32366243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 42839383 - 42839313
Alignment:
Q  191 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    ||||||||| |||||||||||| |||||| ||||||||| |||| |||||||||||||| ||||||||||||    
T  42839383 ttttatgtattattcataagtttgtcaagttagtttatg-aaaaccagcttatgaagatgcaattttcgtta 42839313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 268
Target Start/End: Original strand, 5516059 - 5516176
Alignment:
Q  152 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg-aaaaaacagcttatgaagata 250  Q
    ||||||||| |||||||  ||||||| ||| |||||  ||| |||||  |||||||||||| || || |||||||||| ||||||||| |||| || |||    
T  5516059 tttgagcttttgcaaaacagcttatgtaaaaaaataagcttctatgtgttattcataagtttgtaaatgtagtttatgaaaaaaacagtttataaaaata 5516158  T
Q  251 caattttcgttattgaga 268  Q
    |||||||||||| |||||    
T  5516159 caattttcgttagtgaga 5516176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 755612 - 755684
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    |||||||| |||||||| |||||||||||||||||||| ||||  ||||||||||||||| |  |||||||||    
T  755612 ttagggcctgtttggatcgacttatctttgagcttatgaaaaatagcttatgcaaataaagaagcttttatgt 755684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 203 - 271
Target Start/End: Complemental strand, 23956315 - 23956247
Alignment:
Q  203 ttcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||| || || |||||||||| |||||||| |||| |||||||||||||||||| ||||||||    
T  23956315 ttcataagtttgtaaatgtagtttatggaaaaacagtttataaagatacaattttcgttaatgagaact 23956247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 39592270 - 39592350
Alignment:
Q  189 acttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaa 269  Q
    ||||||||| | |||||||||| | |||||||||||||||||||| | |||||| ||||||| ||||||| ||| ||||||    
T  39592270 acttttatgcattattcataagcttgtcaaggtagtttatgaaaataaagcttaagaagatataattttctttagtgagaa 39592350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 22898475 - 22898349
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 234  Q
    |||||||||  ||||| || ||||||||  ||||   |||||||||||||||| | ||||||||| |||| |||| ||  | ||||||||||||||||||    
T  22898475 gtttggattagcttattttagagcttatataaaataacttatgcaaataaatacatttttatgtattatttataaattttt-aaggtagtttatgaaaaa 22898377  T
Q  235 acagcttatgaagatacaattttcgtta 262  Q
    |  | ||||||| |||||||||||||||    
T  22898376 atgggttatgaaaatacaattttcgtta 22898349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 12442835 - 12442897
Alignment:
Q  190 cttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 252  Q
    |||||| ||| |||||||||| | |||||| |||||||||||||| |||||||||||||||||    
T  12442835 cttttaggtattattcataagcttgtcaagatagtttatgaaaaagcagcttatgaagataca 12442897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 30995984 - 30995908
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactatt---cataagttggtcaaggtagtttatgaaaaaacagcttatgaa 246  Q
    |||| |||||||||| ||||||||||| ||||   ||||||||| ||||| ||||||||||||||| ||||||||||    
T  30995984 ttatacaaataaataaacttttatgtattattattcataagttgatcaagatagtttatgaaaaaatagcttatgaa 30995908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 33321215 - 33321285
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    ||||||| ||||||||| ||||| |||||||||||| ||||  ||||||||||||||||| || |||||||    
T  33321215 agggcccatttggattggcttatttttgagcttatgtaaaatagcttatgcaaataaataaacctttatgt 33321285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 499 - 573
Target Start/End: Original strand, 38691434 - 38691508
Alignment:
Q  499 atatggcttgctttctctttaacccctaaaccagttaagtataagatgaaggatcattataatgtaaaaattgta 573  Q
    ||||| |||||||| ||||||||||||||||| ||||||| ||| ||||||| ||| | |||||| |||||||||    
T  38691434 atatgacttgctttgtctttaacccctaaacctgttaagtgtaacatgaagggtcaatttaatgttaaaattgta 38691508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 133 - 198
Target Start/End: Complemental strand, 8832635 - 8832570
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    |||||||||||||||||| ||| |||||||| ||||  |||||||||||||||||  |||||||||    
T  8832635 ccgtttggattgacttattttttagcttatgaaaaatagcttatgcaaataaataagcttttatgt 8832570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 171 - 262
Target Start/End: Complemental strand, 12238566 - 12238478
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    |||||||||||||||||  | || ||||| |||| ||||| | || |||||||||||||||||||   |||||||| |||||||||||||||    
T  12238566 gcttatgcaaataaataagcattaatgtattatttataagcttgttaaggtagtttatgaaaaaa---cttatgaacatacaattttcgtta 12238478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 201 - 262
Target Start/End: Complemental strand, 16108175 - 16108114
Alignment:
Q  201 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    |||| ||||||| || ||||||||||||||||||||| |||||||| |||||||||| ||||    
T  16108175 tatttataagtttgttaaggtagtttatgaaaaaacaacttatgaatatacaatttttgtta 16108114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 27881105 - 27880980
Alignment:
Q  146 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 245  Q
    ||||| || ||||||||||||||  |||||||||||||||||   | ||||||| |||| |||||||  | ||||||| |||||||||||||  ||||||    
T  27881105 cttattttagagcttatgcaaaatagcttatgcaaataaatatgttattatgtattatttataagtttattaaggtagcttatgaaaaaacaatttatga 27881006  T
Q  246 agatacaattttcgttattgagaact 271  Q
    |  || | ||||||||| ||| ||||    
T  27881005 aagtatacttttcgttaatgaaaact 27880980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 271
Target Start/End: Original strand, 735991 - 736067
Alignment:
Q  195 atgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||| |||| ||||| | || ||||| ||||||||||||| || ||||||||||| |||||| |||||||||||||    
T  735991 atgtattatttataagcttgttaaggtggtttatgaaaaaatagtttatgaagatataatttttgttattgagaact 736067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 4533506 - 4533446
Alignment:
Q  127 tagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 187  Q
    ||||| ||||||||||| |||||| |||||||||||| ||||  |||||||||||||||||    
T  4533506 tagggtccgtttggattaacttatttttgagcttatgaaaaatagcttatgcaaataaata 4533446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 37420089 - 37419987
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 227  Q
    ||||||| ||||||||| ||||| ||| |||||||| ||||    |||||||||||||||  |||||||||   |||||||| || ||||||||||||||    
T  37420089 agggcccatttggattggcttattttttagcttatgaaaaataatttatgcaaataaataagcttttatgtta-attcataattttgtcaaggtagttta 37419991  T
Q  228 tgaa 231  Q
    ||||    
T  37419990 tgaa 37419987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 271
Target Start/End: Original strand, 8832464 - 8832560
Alignment:
Q  178 caaataaatagacttttatgtactatt---cataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||||  |||||||||| ||||   |||||| |  ||||||||||||||||||| |||| |||  |||||||||||||||||| ||| ||||    
T  8832464 caaataaataagcttttatgtattattaatcataagcttttcaaggtagtttatgaaaacacaggttagaaagatacaattttcgttagtgaaaact 8832560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 274
Target Start/End: Complemental strand, 9140831 - 9140710
Alignment:
Q  152 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 251  Q
    ||||||||||| |||||   | ||||||||||||||  |||||||||| || ||||||  | ||||| |||||||||| |||||||| ||||||||||      
T  9140831 tttgagcttatacaaaacatcgtatgcaaataaataaccttttatgtatta-tcataaacttgtcaatgtagtttatgtaaaaacagtttatgaagatgt 9140733  T
Q  252 aattttcgttattgagaactcat 274  Q
    | ||||||||  ||| |||||||    
T  9140732 acttttcgttgatgaaaactcat 9140710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 27703560 - 27703502
Alignment:
Q  152 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataag 210  Q
    |||||||||||||||||  |||||||||||||||||  ||||||| || ||||||||||    
T  27703560 tttgagcttatgcaaaacagcttatgcaaataaataagcttttatatattattcataag 27703502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 36501418 - 36501488
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    |||||| |||||||||| ||||| ||||||||| || ||||  |||||||||||||||||  |||||||||    
T  36501418 agggcctgtttggattggcttatttttgagcttgtgaaaaatagcttatgcaaataaataagcttttatgt 36501488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 128 - 165
Target Start/End: Original strand, 9140647 - 9140684
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgca 165  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  9140647 agggcccgtttggattgacttatttttgagcttatgca 9140684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 11072911 - 11073015
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtact-attcataagttggtcaaggtagtttatgaa 231  Q
    |||||||||||| ||||| ||| || |||||| |||  |||||| |||| |||||  ||||| |||| | ||||||||| | ||||||||||||||||||    
T  11072911 ccgtttggattggcttattttttag-ttatgctaaacagcttatccaaacaaataagcttttttgtattcattcataagcttgtcaaggtagtttatgaa 11073009  T
Q  232 aaaaca 237  Q
    ||||||    
T  11073010 aaaaca 11073015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 133 - 262
Target Start/End: Original strand, 24438984 - 24439113
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 232  Q
    ||||||| |||| ||||| || |||||||||||||    | |||||||||| ||| || || ||||| |||| ||||  | || | ||||||||||||||    
T  24438984 ccgtttgaattggcttattttagagcttatgcaaagcaacatatgcaaatatataaacattaatgtattatttataatcttgttacggtagtttatgaaa 24439083  T
Q  233 aaacagcttatgaagatacaattttcgtta 262  Q
    ||||| ||||| || |||||||||| ||||    
T  24439084 aaacaacttataaacatacaatttttgtta 24439113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 130 - 231
Target Start/End: Original strand, 40301314 - 40301414
Alignment:
Q  130 ggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg 229  Q
    ||||||||||||||  ||||| || ||||||||  ||||  |||||||||||||||||   ||||||||| |||| |||||||  | |||||||||||||    
T  40301314 ggcccgtttggattagcttattttagagcttataaaaaacagcttatgcaaataaataagtttttatgtattatttataagtt-tttaaggtagtttatg 40301412  T
Q  230 aa 231  Q
    ||    
T  40301413 aa 40301414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 125 - 197
Target Start/End: Complemental strand, 5903801 - 5903729
Alignment:
Q  125 tttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatg 197  Q
    |||||| || |||||||||| ||||| |||||||| ||| ||||  |||||||||||||||||  ||||||||    
T  5903801 tttaggacctgtttggattggcttatttttgagctcatgaaaaatagcttatgcaaataaataagcttttatg 5903729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 8441460 - 8441536
Alignment:
Q  155 gagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 231  Q
    |||||||||||||   |||||||||||||||||   ||||||||| |||| ||||||| || || ||||||||||||    
T  8441460 gagcttatgcaaagcagcttatgcaaataaatatgtttttatgtattatttataagtttgttaatgtagtttatgaa 8441536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 212
Target Start/End: Original strand, 25836617 - 25836698
Alignment:
Q  129 gggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagtt 212  Q
    ||||| |||||||| ||||||| |||||||||||| | ||   ||||||||||||||||  |||||||||  ||||||||||||    
T  25836617 gggcctgtttggatcgacttatttttgagcttatgaagaataccttatgcaaataaataagcttttatgt--tattcataagtt 25836698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 41554662 - 41554602
Alignment:
Q  172 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 232  Q
    ||||| |||||||||| ||||||||||| ||||||||| || || || |||||||||||||    
T  41554662 cttatacaaataaataaacttttatgtattattcataaatttgttaaagtagtttatgaaa 41554602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 198
Target Start/End: Complemental strand, 5903714 - 5903651
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    |||||||||| ||||| |||||||| ||| ||||  |||||||||||||||||  |||||||||    
T  5903714 gtttggattggcttatttttgagctcatgaaaaatagcttatgcaaataaataagcttttatgt 5903651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 271
Target Start/End: Original strand, 15155817 - 15155916
Alignment:
Q  172 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||| |||||||||  |||||||||| |||| ||||  | || || | ||||||||||||||||  ||| |||| |||||||| ||||| ||||||||    
T  15155817 cttatgaaaataaatatgcttttatgtattatttataatcttgttaatgaagtttatgaaaaaacaatttaagaaggtacaatttccgttaatgagaact 15155916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 18276905 - 18276944
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaa 167  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  18276905 agggcccgcttggattgacttatttttgagcttatgcaaa 18276944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 271
Target Start/End: Original strand, 17546473 - 17546527
Alignment:
Q  217 aaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||||||||||||||| |||||||| |||  |||||||||| ||| ||||    
T  17546473 aaggtagtttatgaaaaaacaacttatgaatatatcattttcgttagtgaaaact 17546527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 38010582 - 38010632
Alignment:
Q  137 ttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 187  Q
    |||||||| |||||||||||||||||| ||||  |||||| ||||||||||    
T  38010582 ttggattgtcttatctttgagcttatgaaaaatagcttatacaaataaata 38010632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 42064884 - 42064954
Alignment:
Q  201 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||| | || |||||||||||| |||||| | ||||||||||||  |||||||||| | ||||||    
T  42064884 tattcataagcttgttaaggtagtttataaaaaaataacttatgaagatatcattttcgttagtaagaact 42064954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 8343080 - 8342992
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    ||||||||||| |||   ||||||||| |||| ||||| | ||||| ||| |||||| ||||| |  |||||||||||||||||||||||    
T  8343080 ttatgcaaatacatatttttttatgtattatt-ataagcttgtcaatgtattttatgcaaaaataatttatgaagatacaattttcgtta 8342992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 8e-38; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 135 - 271
Target Start/End: Original strand, 38372525 - 38372661
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 234  Q
    |||||||||||||||| |||||||||||||||||  |||||||||||||||||  || ||||||| |||||||||||| |||||||||||||| ||||||    
T  38372525 gtttggattgacttatttttgagcttatgcaaaacagcttatgcaaataaataagctcttatgtattattcataagtttgtcaaggtagtttacgaaaaa 38372624  T
Q  235 acagcttatgaagatacaattttcgttattgagaact 271  Q
     ||||| | ||||| ||||||||||||| ||||||||    
T  38372625 gcagctcaagaagaaacaattttcgttagtgagaact 38372661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 29378648 - 29378748
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    |||||||||||||||||  |||||||||| |||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  29378648 gcttatgcaaataaataagcttttatgtattatttatgagtttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtaagaac 29378747  T
Q  271 t 271  Q
    |    
T  29378748 t 29378748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 131 - 271
Target Start/End: Original strand, 34922894 - 34923036
Alignment:
Q  131 gcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttat-- 228  Q
    |||||||||||||| ||||| ||| |||| | ||||||   ||||||||||||||||  |||||||||| |||||||||||| |||||||||||||||      
T  34922894 gcccgtttggattggcttatttttcagctaacgcaaaacaacttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttataa 34922993  T
Q  229 gaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
     |||||||||||| |||||||||| ||||||||| ||||||||    
T  34922994 aaaaaaacagcttgtgaagatacacttttcgttagtgagaact 34923036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 134 - 251
Target Start/End: Original strand, 30181516 - 30181633
Alignment:
Q  134 cgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 233  Q
    ||||||||||||||||| ||||||||||||||| |   |||| ||||||||| |  |||||||||| |||||||||| | ||||||||||||||| ||||    
T  30181516 cgtttggattgacttatttttgagcttatgcaatacaacttaggcaaataaagaagcttttatgtattattcataagcttgtcaaggtagtttatcaaaa 30181615  T
Q  234 aacagcttatgaagatac 251  Q
    ||||||||||||||||||    
T  30181616 aacagcttatgaagatac 30181633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 133 - 262
Target Start/End: Original strand, 22575551 - 22575680
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 232  Q
    ||||||||||| |||||| || ||||||||| ||||   ||||||||||||||||   ||||||||| |||| ||||||| || ||| || |||||||||    
T  22575551 ccgtttggattaacttattttagagcttatgtaaaacatcttatgcaaataaatacgtttttatgtattatttataagtttgttaagatattttatgaaa 22575650  T
Q  233 aaacagcttatgaagatacaattttcgtta 262  Q
    |||||| |||||||||||||||||||||||    
T  22575651 aaacagtttatgaagatacaattttcgtta 22575680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 133 - 262
Target Start/End: Complemental strand, 29390671 - 29390543
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 232  Q
    |||||||||||| ||||| |||||| ||||| ||||   ||||||||||||||||  |||| ||||| |||||||||| | || |||||||||||||| |    
T  29390671 ccgtttggattggcttatttttgagtttatggaaaacaacttatgcaaataaataatctttgatgtattattcataagcttgtaaaggtagtttatga-a 29390573  T
Q  233 aaacagcttatgaagatacaattttcgtta 262  Q
    ||||| ||||||||||||||||||||||||    
T  29390572 aaacaacttatgaagatacaattttcgtta 29390543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 153 - 257
Target Start/End: Complemental strand, 44613574 - 44613470
Alignment:
Q  153 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 252  Q
    ||||||||||||||||  |||||||||||||||||  ||||||| || |||||||||| | || ||||||||||||||||||||| ||||||| ||||||    
T  44613574 ttgagcttatgcaaaacagcttatgcaaataaataagcttttatttattattcataagcttgttaaggtagtttatgaaaaaacaacttatgacgataca 44613475  T
Q  253 atttt 257  Q
    |||||    
T  44613474 atttt 44613470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 133 - 262
Target Start/End: Complemental strand, 22319412 - 22319283
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 232  Q
    |||||||||||| ||||| || ||| ||||||||| | | ||||||||||||||| || || ||||| |||||||||||| || ||  ||||||||||||    
T  22319412 ccgtttggattggcttattttagagtttatgcaaagaggtttatgcaaataaataaacattaatgtattattcataagtttgttaacatagtttatgaaa 22319313  T
Q  233 aaacagcttatgaagatacaattttcgtta 262  Q
     |||| |||||||| |||||||||||||||    
T  22319312 caacaacttatgaatatacaattttcgtta 22319283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 127 - 262
Target Start/End: Original strand, 16958775 - 16958909
Alignment:
Q  127 tagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttt 226  Q
    |||||| ||||||||||  ||||| |||||||||||  ||||   ||||||||| |||||| | ||||||||| |||| |||||||  | ||||||||||    
T  16958775 tagggctcgtttggattagcttatttttgagcttatataaaacaacttatgcaactaaataaatttttatgtattatttataagttttt-aaggtagttt 16958873  T
Q  227 atgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    |||||||||| | |||||||||||||||||||||||    
T  16958874 atgaaaaaaccgtttatgaagatacaattttcgtta 16958909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 40629542 - 40629440
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 227  Q
    |||||| |||||||||| ||||| |||||||||||||||||  |||||| |||||||||| || |||||||| |||||||||| | ||||||||||||||    
T  40629542 agggcctgtttggattggcttatttttgagcttatgcaaaacagcttatccaaataaataaac-tttatgtattattcataagcttgtcaaggtagttta 40629444  T
Q  228 tgaa 231  Q
    ||||    
T  40629443 tgaa 40629440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 171 - 258
Target Start/End: Original strand, 47511046 - 47511133
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttc 258  Q
    |||||||||||||||||  |||||||||| |||||||||| | || |||| ||| |||||||||||||||||||||||||||||||||    
T  47511046 gcttatgcaaataaataagcttttatgtattattcataagcttgttaaggaagtctatgaaaaaacagcttatgaagatacaattttc 47511133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 141 - 267
Target Start/End: Complemental strand, 19308604 - 19308478
Alignment:
Q  141 attgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagct 240  Q
    |||||| ||| |||||||| |||| ||| |||||||| ||||||||| | ||| ||||| |||||||||||| || | ||||||||||||||||  ||||    
T  19308604 attgacatatttttgagctaatgcgaaactgcttatgaaaataaataaaatttcatgtattattcataagtttgttagggtagtttatgaaaaattagct 19308505  T
Q  241 tatgaagatacaattttcgttattgag 267  Q
    ||||||||| ||||||| |||| ||||    
T  19308504 tatgaagatccaatttttgttagtgag 19308478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 125 - 258
Target Start/End: Complemental strand, 14676087 - 14675956
Alignment:
Q  125 tttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 224  Q
    |||||||||||||||||||  ||||| || ||||||||  ||||   |||||||||||||||||   |||||||| |||| |||||||  | ||||||||    
T  14676087 tttagggcccgtttggattagcttat-ttagagcttatataaaacaacttatgcaaataaataggtgtttatgtattatttataagttttt-aaggtagt 14675990  T
Q  225 ttatgaaaaaacagcttatgaagatacaattttc 258  Q
    |||||||||||||| |||||||||||||||||||    
T  14675989 ttatgaaaaaacagtttatgaagatacaattttc 14675956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 16933058 - 16932922
Alignment:
Q  125 tttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 224  Q
    |||||||| ||||||||||  ||||| |||||||||||  ||||   ||||||||| |||||| | ||||||||| |||| |||||||  | ||||||||    
T  16933058 tttagggctcgtttggattagcttatttttgagcttatataaaataacttatgcaactaaataaatttttatgtattatttataagttttt-aaggtagt 16932960  T
Q  225 ttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    ||||||||||||   |||||||||||||||||||||||    
T  16932959 ttatgaaaaaaccatttatgaagatacaattttcgtta 16932922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 16938441 - 16938305
Alignment:
Q  125 tttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 224  Q
    |||||||| ||||||||||  ||||| |||||||||||  ||||   ||||||||| |||||| | ||||||||| |||| |||||||  | ||||||||    
T  16938441 tttagggctcgtttggattagcttatttttgagcttatataaaataacttatgcaactaaataaatttttatgtattatttataagttttt-aaggtagt 16938343  T
Q  225 ttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    ||||||||||||   |||||||||||||||||||||||    
T  16938342 ttatgaaaaaaccatttatgaagatacaattttcgtta 16938305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 126 - 274
Target Start/End: Complemental strand, 37779405 - 37779262
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 225  Q
    |||||| || ||||||||| ||||| ||| ||||||| |||||  |||||||||||||||||  |||||||      |||||||| | ||||||||||||    
T  37779405 ttaggggccatttggattggcttattttt-agcttatacaaaacagcttatgcaaataaataagcttttat------ttcataagcttgtcaaggtagtt 37779313  T
Q  226 tatgaaaaaa--cagcttatgaagatacaattttcgttattgagaactcat 274  Q
    ||||||||||  ||||||||||| |||||| |||||||| |||||||||||    
T  37779312 tatgaaaaaaaacagcttatgaaaatacaactttcgttagtgagaactcat 37779262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 172 - 271
Target Start/End: Original strand, 41677378 - 41677478
Alignment:
Q  172 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa-cagcttatgaagatacaattttcgttattgagaac 270  Q
    |||||||||||||||| | ||||||||| |||||||||||| ||||| ||||||||| |||||| ||| |||||||||||||||||| |||  |||||||    
T  41677378 cttatgcaaataaataaatttttatgtattattcataagtttgtcaatgtagtttattaaaaaaccagattatgaagatacaattttagtttgtgagaac 41677477  T
Q  271 t 271  Q
    |    
T  41677478 t 41677478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 176 - 271
Target Start/End: Complemental strand, 14691378 - 14691282
Alignment:
Q  176 tgcaaataaataga-cttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||||| | |||||||||| |||||||||| | ||||| ||| ||||||||||||||  ||||||||||| ||||||||||| ||||||||    
T  14691378 tgcaaataaataaagcttttatgtattattcataagcttgtcaatgtaatttatgaaaaaacaatttatgaagatataattttcgttagtgagaact 14691282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 135 - 271
Target Start/End: Original strand, 22032729 - 22032865
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 234  Q
    |||||||||  ||||| || ||||||||| ||||   ||||||||||||||||   ||||||||| |||| |||||   || || |||||||||||||||    
T  22032729 gtttggattagcttattttagagcttatgtaaaacaacttatgcaaataaatatgtttttatgtattatttataagcatgttaatgtagtttatgaaaaa 22032828  T
Q  235 acagcttatgaagatacaattttcgttattgagaact 271  Q
    |||  |||||||| |||||||||||||| ||||||||    
T  22032829 acaatttatgaaggtacaattttcgttagtgagaact 22032865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 23120048 - 23119917
Alignment:
Q  126 ttagggcccgtttggatt-gacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 224  Q
    |||||||||||||||||  | ||||| |||||||||||||||||   | ||||||||||||||  |||| | ||| |||||||||||| ||||| |||||    
T  23120048 ttagggcccgtttggataaggcttat-tttgagcttatgcaaaacaacctatgcaaataaataatctttaaagtattattcataagtttgtcaatgtagt 23119950  T
Q  225 ttatgaaaaaacagcttatgaagatacaatttt 257  Q
    ||| |||| ||||| || |||||||||||||||    
T  23119949 ttaagaaataacagtttgtgaagatacaatttt 23119917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 6406912 - 6406856
Alignment:
Q  214 gtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| || |||||||    
T  6406912 gtcaaggtagtttatgaaaaaacagcttatgaagatgcaattttcgctaatgagaac 6406856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 135 - 271
Target Start/End: Complemental strand, 47654533 - 47654397
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 234  Q
    |||||||||  ||||| || |||||| |||||||  ||||||| |||||||||  |  | ||||| |||  ||||| | || || |||||||||||||||    
T  47654533 gtttggattagcttattttagagcttttgcaaaacagcttatgtaaataaatatgccctgatgtattatatataagcttgttaatgtagtttatgaaaaa 47654434  T
Q  235 acagcttatgaagatacaattttcgttattgagaact 271  Q
    |||| |||||||| |||||||||||||| ||||||||    
T  47654433 acagtttatgaaggtacaattttcgttagtgagaact 47654397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 236
Target Start/End: Complemental strand, 7098221 - 7098118
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 232  Q
    |||||||||||||||| | || |||||| |||||||  | |||| ||||||||||   ||||||| | |||||||||||| |||||| ||||||||||||    
T  7098221 ccgtttggattgacttgttttcgagcttgtgcaaaatagtttatacaaataaataagattttatgaattattcataagtttgtcaagatagtttatgaaa 7098122  T
Q  233 aaac 236  Q
    ||||    
T  7098121 aaac 7098118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 259
Target Start/End: Original strand, 35809050 - 35809181
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 227  Q
    |||| |||||||||||| ||||| || |||||||| ||||    ||||||||||||||||  | || ||||| |||| ||||| | || || ||||||||    
T  35809050 agggtccgtttggattggcttattttagagcttatacaaagcatcttatgcaaataaataagcattaatgtattatttataagcttgttaacgtagttta 35809149  T
Q  228 tgaaaaaacagcttatgaagatacaattttcg 259  Q
    |||||||||| |||| ||| ||||||||||||    
T  35809150 tgaaaaaacaacttaagaatatacaattttcg 35809181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 173 - 258
Target Start/End: Original strand, 20888578 - 20888664
Alignment:
Q  173 ttatgcaaataaatagactttt-atgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttc 258  Q
    |||||||||||||||  ||||| ||||| |||||||||| | |  |||||||||||||||||||||  |||||||||||||||||||    
T  20888578 ttatgcaaataaataagctttttatgtattattcataagcttgcaaaggtagtttatgaaaaaacaatttatgaagatacaattttc 20888664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 173 - 262
Target Start/End: Original strand, 41094223 - 41094310
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    |||||||||||||||  | |||||||| || ||||||| | |||||||| ||||||||||||  | ||||||||||||||||||||||||    
T  41094223 ttatgcaaataaataagcctttatgtattactcataagcttgtcaaggtggtttatgaaaaa--aacttatgaagatacaattttcgtta 41094310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 267
Target Start/End: Original strand, 14593142 - 14593250
Alignment:
Q  162 tgcaaaaatgcttatgcaaataaatagacttttatgtactattcata--agttggtcaaggtagtttatgaaaaaa-cagcttatgaagatacaattttc 258  Q
    |||||||  ||||||||||||||||| |  |||||||| ||||||||  || | ||||| |||||||||||||||| | |||| ||||||||||||||||    
T  14593142 tgcaaaatagcttatgcaaataaataaaagtttatgtattattcatataagcttgtcaaagtagtttatgaaaaaaactgcttgtgaagatacaattttc 14593241  T
Q  259 gttattgag 267  Q
    |||| ||||    
T  14593242 gttagtgag 14593250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 46744003 - 46744056
Alignment:
Q  218 aggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||| ||||||||||||| |||||||||||||||||||||| ||||||||    
T  46744003 aggtagttaatgaaaaaacagcatatgaagatacaattttcgttagtgagaact 46744056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 19913912 - 19914039
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 234  Q
    |||||||||  ||||| || ||||||||  ||||   |||||| ||||||||| | |||||||| ||||| |||| || || || |||||||||||||||    
T  19913912 gtttggattagcttattttagagcttatataaaataacttatgtaaataaataaatttttatgtgctatttataaatttgttaatgtagtttatgaaaaa 19914011  T
Q  235 acagcttatgaagatacaattttcgtta 262  Q
    || | ||||||||| | |||||||||||    
T  19914012 acggtttatgaagagataattttcgtta 19914039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 270
Target Start/End: Complemental strand, 23356573 - 23356475
Alignment:
Q  172 cttatgcaaataaata-gacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    |||||| ||||||||| | ||||| |||| |||||| ||||| ||||||||| ||||||||||||||| ||||||| |||| ||||| |||| |||||||    
T  23356573 cttatgaaaataaataaggctttt-tgtattattcacaagtttgtcaaggtaatttatgaaaaaacagtttatgaaaatactatttttgttagtgagaac 23356475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 29378828 - 29378769
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 187  Q
    ||||||||||||||||||||||| |||||| ||||| ||||  |||||||||||||||||    
T  29378828 agggcccgtttggattgacttatttttgagtttatgaaaaatagcttatgcaaataaata 29378769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 39279462 - 39279532
Alignment:
Q  201 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtt-attgagaac 270  Q
    |||||||||| | || ||||| |||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  39279462 tattcataagcttgttaaggtggtttatgaaaaatcagcttaggaagatacaattttcgttaattgagaac 39279532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 16012744 - 16012801
Alignment:
Q  214 gtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||| ||||||||||||||||| |||| |||||||||||||||||||| ||| ||||    
T  16012744 gtcaaagtagtttatgaaaaaactgcttctgaagatacaattttcgttagtgaaaact 16012801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 172 - 257
Target Start/End: Original strand, 43391725 - 43391810
Alignment:
Q  172 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaatttt 257  Q
    |||||| ||||||||| |||| | | || |||||||||||| || ||||||||||||||||||| |  ||||||||||| ||||||    
T  43391725 cttatgtaaataaataaacttatgtttattattcataagtttgttaaggtagtttatgaaaaaataatttatgaagatataatttt 43391810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 135 - 235
Target Start/End: Original strand, 18837189 - 18837289
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 234  Q
    |||||||||| ||||| |||||||||||||||||  || ||||||||||||||  ||| | |||| |||||||||| | || |||||| || || |||||    
T  18837189 gtttggattggcttatttttgagcttatgcaaaacagcatatgcaaataaataagcttatgtgtattattcataagcttgtaaaggtacttaataaaaaa 18837288  T
Q  235 a 235  Q
    |    
T  18837289 a 18837289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 26331778 - 26331830
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 187  Q
    |||||||||||||||| |||||||||||||||||  ||||||| |||||||||    
T  26331778 gtttggattgacttatgtttgagcttatgcaaaatagcttatgtaaataaata 26331830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 267
Target Start/End: Original strand, 35246632 - 35246768
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 227  Q
    ||||||||||||||||  ||||| || |||| |||  ||||   ||||||||||||||||   ||||||||| |||| | |||||  | |||||||||||    
T  35246632 agggcccgtttggattagcttattttagagcctatataaaacaacttatgcaaataaataagtttttatgtattatttaaaagttttt-aaggtagttta 35246730  T
Q  228 tgaaaaaacagcttatgaagatacaattttcgttattgag 267  Q
    |||||||||   |||||| |||||||||||||||| ||||    
T  35246731 tgaaaaaac--tttatgaggatacaattttcgttagtgag 35246768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 12473389 - 12473456
Alignment:
Q  204 tcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||| || || ||||||||||||||||||| |||| |||| ||||||||||||  ||||||||    
T  12473389 tcataagtttgtaaatgtagtttatgaaaaaacagtttataaagaaacaattttcgtttgtgagaact 12473456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 191 - 250
Target Start/End: Original strand, 14536905 - 14536964
Alignment:
Q  191 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagata 250  Q
    ||||||||| |||||||||| | |||||| |||||||||||||||||  |||||||||||    
T  14536905 ttttatgtattattcataagattgtcaagatagtttatgaaaaaacactttatgaagata 14536964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 125 - 187
Target Start/End: Complemental strand, 22032948 - 22032886
Alignment:
Q  125 tttagggcccgtttggattga-cttatctttgagcttatgcaaaaatgcttatgcaaataaata 187  Q
    |||||| |||||||||||||| ||||| |||||||||||| ||||| |||||||||||||||||    
T  22032948 tttaggccccgtttggattgagcttat-tttgagcttatgaaaaaaagcttatgcaaataaata 22032886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 135 - 198
Target Start/End: Original strand, 29390461 - 29390524
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    |||||||||||||||| |||||||||||| ||||  | |||||||||||||||  |||||||||    
T  29390461 gtttggattgacttatttttgagcttatgaaaaatagtttatgcaaataaataagcttttatgt 29390524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 178 - 261
Target Start/End: Complemental strand, 31613741 - 31613658
Alignment:
Q  178 caaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtt 261  Q
    |||||||||| | || |||||| ||||||| || | ||||| |||||||||||||||||| | |||||||| || |||||||||    
T  31613741 caaataaataaatttgtatgtattattcattagcttgtcaatgtagtttatgaaaaaacaacctatgaagaaaccattttcgtt 31613658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 35331102 - 35331161
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 187  Q
    |||||| |||||||||||||||| ||  |||||||||||||  |||||||||||||||||    
T  35331102 agggccagtttggattgacttattttgtagcttatgcaaaacagcttatgcaaataaata 35331161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 40766772 - 40766697
Alignment:
Q  273 atgttagaatggaacaataatacggctttcccagaagattatgagtagaaggttctgcattcattagagagacgac 348  Q
    |||||||||||||||||||||| ||||||   | ||||||||||| |||| ||| |||||||||  ||||||||||    
T  40766772 atgttagaatggaacaataataaggctttttgaaaagattatgagaagaatgttgtgcattcatccgagagacgac 40766697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 135 - 257
Target Start/End: Original strand, 48895264 - 48895390
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatga---- 230  Q
    ||||||||| | |||| |||||||||||||||||  | || ||||||||||||  | || || || |||||||||| |  ||||||||||||||||        
T  48895264 gtttggattaatttatttttgagcttatgcaaaaccgttt-tgcaaataaataagcattcatatattattcataagcttatcaaggtagtttatgagaca 48895362  T
Q  231 -aaaaacagcttatgaagatacaatttt 257  Q
     |||||||| ||||||||||||||||||    
T  48895363 aaaaaacagtttatgaagatacaatttt 48895390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 257
Target Start/End: Original strand, 14730019 - 14730053
Alignment:
Q  223 gtttatgaaaaaacagcttatgaagatacaatttt 257  Q
    |||||||||||||||||||||||||||||||||||    
T  14730019 gtttatgaaaaaacagcttatgaagatacaatttt 14730053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 17944686 - 17944756
Alignment:
Q  201 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||| | |||||||||||||||  ||||||| ||||||||||||||| || | ||| ||||||||    
T  17944686 tattcataagcttgtcaaggtagtttatagaaaaacaacttatgaagatacaaattacattagtgagaact 17944756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 257
Target Start/End: Complemental strand, 21027576 - 21027510
Alignment:
Q  191 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaatttt 257  Q
    ||||||||| |||| |||||||  | ||||| |||||||||||||||| || |||||||||||||||    
T  21027576 ttttatgtattatttataagtttattaaggtggtttatgaaaaaacagtttttgaagatacaatttt 21027510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 25908476 - 25908418
Alignment:
Q  129 gggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 187  Q
    |||||||||||||||| ||||| |||||| ||||| ||||  |||||||||||||||||    
T  25908476 gggcccgtttggattggcttatttttgaggttatgaaaaatggcttatgcaaataaata 25908418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 268
Target Start/End: Complemental strand, 23137285 - 23137149
Alignment:
Q  131 gcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatga 230  Q
    |||||||| ||||  ||||| || ||||||||  ||||   ||||| |||| ||||| | ||||||||| |||| |||||||  | |||||||||||||     
T  23137285 gcccgttttgattagcttattttagagcttatataaaataacttatacaaacaaataaatttttatgtattatttataagttttt-aaggtagtttatgt 23137187  T
Q  231 aaaaacagcttatgaagatacaattttcgttattgaga 268  Q
    |||||  | ||||||||||||||||||| ||| |||||    
T  23137186 aaaaatcgtttatgaagatacaattttcattagtgaga 23137149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 48949769 - 48949814
Alignment:
Q  217 aaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    |||||||||||||||||||||| ||||||||||| ||| |||||||    
T  48949769 aaggtagtttatgaaaaaacagtttatgaagatataatattcgtta 48949814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 172 - 268
Target Start/End: Original strand, 991504 - 991599
Alignment:
Q  172 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgaga 268  Q
    |||||||| |||||||   ||||||| | |||| |||||||  | ||||||||||||||||||||   ||||||||||||| ||||||||| |||||    
T  991504 cttatgcacataaataagtttttatgcattatttataagttttt-aaggtagtttatgaaaaaaccatttatgaagatacacttttcgttagtgaga 991599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 201 - 261
Target Start/End: Complemental strand, 7774799 - 7774740
Alignment:
Q  201 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtt 261  Q
    |||| ||||||| ||||| ||| ||||||||||||||  ||||||||||||||||||||||    
T  7774799 tatttataagtttgtcaacgtactttatgaaaaaacat-ttatgaagatacaattttcgtt 7774740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 18765147 - 18765095
Alignment:
Q  220 gtagtttatgaaaaaac-agcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||||||||||| | ||||||||||||||||||| |||| ||||||||    
T  18765147 gtagtttatgaaaaaactaacttatgaagatacaatttttgttagtgagaact 18765095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 123 - 258
Target Start/End: Original strand, 24414478 - 24414614
Alignment:
Q  123 gctttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggta 222  Q
    |||||| || || |||| |||||| ||| | |||| |||||||||||   ||||| ||||||||| || |||||||| ||| |||||| | |||||| ||    
T  24414478 gctttatggtccatttgaattgacgtatttatgaggttatgcaaaaaaatttatgtaaataaataaacatttatgtattatccataagcttgtcaagata 24414577  T
Q  223 gtttat-gaaaaaacagcttatgaagatacaattttc 258  Q
    | ||||  |||||||| |||||| || ||||||||||    
T  24414578 gcttataaaaaaaacaacttatggagttacaattttc 24414614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 260
Target Start/End: Original strand, 28004552 - 28004675
Alignment:
Q  136 tttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa 235  Q
    ||||||||  ||||| || ||||||||  ||||  |||||||||||||||||   ||||||||| |||| |||| ||  | ||| |||||||||||||||    
T  28004552 tttggattagcttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataatttttttaag-tagtttatgaaaaaa 28004650  T
Q  236 cagcttatgaagatacaattttcgt 260  Q
    |   |||||||||||||| ||||||    
T  28004651 ccatttatgaagatacaaatttcgt 28004675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 175 - 271
Target Start/End: Complemental strand, 32917671 - 32917575
Alignment:
Q  175 atgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||||||   |||||||||  ||||||||| |  |||  || ||||| ||||||||| |||||||||||| |||||| |||| ||||||||    
T  32917671 atgcaaataaataagtttttatgtatcattcataagcttatcatagtggtttacgaaaaaacaacttatgaagatataatttttgttagtgagaact 32917575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 33205019 - 33204947
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    |||||| |||||||||||| ||||| ||| |||||||| ||||   ||||||||||||||||  |||||||||    
T  33205019 ttagggtccgtttggattggcttattttttagcttatgaaaaatatcttatgcaaataaataagcttttatgt 33204947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 268
Target Start/End: Original strand, 44799368 - 44799502
Alignment:
Q  132 cccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 231  Q
    |||||||||||| |||||| || || |||||  ||||  | |||||||||||||||   |||||| || |||| |||||||  | |||||||||| ||||    
T  44799368 cccgtttggattaacttattttagaacttatataaaatagtttatgcaaataaataagtttttat-tattatttataagttttt-aaggtagtttttgaa 44799465  T
Q  232 aaaacagcttatgaagatacaattttcgttattgaga 268  Q
    |||| || ||||||||||| ||| ||||||| |||||    
T  44799466 aaaatagtttatgaagatagaatattcgttagtgaga 44799502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 21249133 - 21249200
Alignment:
Q  145 acttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagtt 212  Q
    |||||| |||| | |||||||||| | ||||||||||||||||   ||||||||| ||||||||||||    
T  21249133 acttatttttgcgtttatgcaaaactacttatgcaaataaataagtttttatgtattattcataagtt 21249200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 24371532 - 24371430
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 227  Q
    ||||||||||||||||  ||||| || ||||||||  ||||  |||||||||||||||||   ||| ||||| |||| |||||||  | |||||||||||    
T  24371532 agggcccgtttggattagcttattttagagcttatataaaacagcttatgcaaataaataagttttaatgtattatttataagtt-tttaaggtagttta 24371434  T
Q  228 tgaa 231  Q
    ||||    
T  24371433 tgaa 24371430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 184
Target Start/End: Original strand, 40629333 - 40629392
Alignment:
Q  125 tttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataa 184  Q
    ||||||||| |||||||||| ||||| |||||||||||| ||||  ||||| ||||||||    
T  40629333 tttagggcctgtttggattggcttatttttgagcttatgaaaaatagcttaggcaaataa 40629392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 271
Target Start/End: Complemental strand, 48021749 - 48021631
Alignment:
Q  152 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 251  Q
    ||||||||||| |||||    |||||||||||||||  || |||| || |||||||||| | || || ||||||||||| |||| | || ||||||||||    
T  48021749 tttgagcttatacaaaacaatttatgcaaataaataagctcttatttattattcataagcttgttaaagtagtttatga-aaaataactaatgaagatac 48021651  T
Q  252 aattttcgttattgagaact 271  Q
    ||||||| ||| ||| ||||    
T  48021650 aattttcattagtgaaaact 48021631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 124 - 198
Target Start/End: Complemental strand, 26331952 - 26331878
Alignment:
Q  124 ctttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    |||||||||||||||| |||| |||||   ||| |||||| ||||  |||||||||||||||||  |||||||||    
T  26331952 ctttagggcccgtttgtattggcttattaatgaacttatgaaaaatagcttatgcaaataaataagcttttatgt 26331878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 9024787 - 9024868
Alignment:
Q  191 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaa-cagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||| |||| ||| ||  || || |||||||||||||||| ||| |||||||| |||||||||||||  ||||||||    
T  9024787 ttttatgtattatttatacgtgtgttaatgtagtttatgaaaaaaacagtttatgaaggtacaattttcgttgatgagaact 9024868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 198
Target Start/End: Complemental strand, 34923115 - 34923046
Alignment:
Q  129 gggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    |||| |||||| |||| ||||| |||||||||||  ||||  |||||||||||||||||  |||||||||    
T  34923115 gggcacgtttgaattggcttatttttgagcttataaaaaatagcttatgcaaataaataagcttttatgt 34923046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 186
Target Start/End: Complemental strand, 38372744 - 38372683
Alignment:
Q  125 tttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaat 186  Q
    ||||| ||||||||||||||  |||| |||||||||||| ||||  ||| ||||||||||||    
T  38372744 tttagtgcccgtttggattgggttatttttgagcttatgaaaaatagctaatgcaaataaat 38372683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 12473190 - 12473250
Alignment:
Q  152 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagtt 212  Q
    |||||||||||||||||   |||||||||| |||||   ||||||||| ||||||||||||    
T  12473190 tttgagcttatgcaaaacaacttatgcaaacaaataagtttttatgtattattcataagtt 12473250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 136 - 168
Target Start/End: Complemental strand, 22515625 - 22515593
Alignment:
Q  136 tttggattgacttatctttgagcttatgcaaaa 168  Q
    ||||||||||||||| |||||||||||||||||    
T  22515625 tttggattgacttatatttgagcttatgcaaaa 22515593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 171 - 235
Target Start/End: Original strand, 41037756 - 41037819
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa 235  Q
    |||||||||||||||||  |||||||||| |||||| ||| | ||||||||| ||||||| ||||    
T  41037756 gcttatgcaaataaataagcttttatgtattattca-aagcttgtcaaggtaatttatgataaaa 41037819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 132 - 212
Target Start/End: Complemental strand, 42609243 - 42609163
Alignment:
Q  132 cccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagtt 212  Q
    |||||||||||||| | || ||||||||||| || ||  ||| ||| |||| |||| |||||||| || ||||||||||||    
T  42609243 cccgtttggattgagtgatttttgagcttatacataacagctcatgtaaatcaatacacttttatttattattcataagtt 42609163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 1e-36; HSPs: 89)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 133 - 271
Target Start/End: Original strand, 4068080 - 4068218
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 232  Q
    |||||||||||| ||||| ||| ||||| |||||||  |||| ||||||||||||  |||||||||| |||||||||| | |||||||||||||||||||    
T  4068080 ccgtttggattggcttattttttagcttttgcaaaatagcttgtgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaa 4068179  T
Q  233 aaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||| ||||||||||||| |||||||||| ||||||||    
T  4068180 aaacaacttatgaagatactattttcgttagtgagaact 4068218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 125 - 271
Target Start/End: Complemental strand, 26435303 - 26435158
Alignment:
Q  125 tttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 224  Q
    |||||||||||||| ||||||| ||| ||||||||||| |||||  ||||||||||||||||| | ||||||||| ||||  |||||| ||||| |||||    
T  26435303 tttagggcccgttttgattgacatatttttgagcttatacaaaacagcttatgcaaataaata-agttttatgtattatttttaagtttgtcaaagtagt 26435205  T
Q  225 ttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||||| | ||||||||||||| ||||||||| ||||||||    
T  26435204 ttatgaaaaaactgtttatgaagatacatttttcgttactgagaact 26435158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 128 - 271
Target Start/End: Complemental strand, 26946231 - 26946087
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagactttt-atgtactattcataagttggtcaaggtagttt 226  Q
    ||||||| ||||||||||||||| |||||||||||||||||  ||||||| |||||||||  ||||| ||||  |||||||||| | || ||||||||||    
T  26946231 agggcccatttggattgacttatttttgagcttatgcaaaacggcttatgtaaataaataagctttttatgtgttattcataagcttgttaaggtagttt 26946132  T
Q  227 atgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||||| |||||||||||||||||||| ||| ||| ||||    
T  26946131 atgaaaaaacaacttatgaagatacaattttccttagtgacaact 26946087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 137 - 271
Target Start/End: Original strand, 35590099 - 35590233
Alignment:
Q  137 ttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaac 236  Q
    |||||||||||||| ||| |||||||| ||||   ||||||||||||||||  ||||||||||   |||||||| | |||||||| ||||||||||||||    
T  35590099 ttggattgacttattttttagcttatgtaaaacaacttatgcaaataaataagcttttatgtatagttcataagcttgtcaaggttgtttatgaaaaaac 35590198  T
Q  237 agcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||||||||||||||||| | ||||||||    
T  35590199 agcttatgaagatacaattttcgtcagtgagaact 35590233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 127 - 257
Target Start/End: Original strand, 28689961 - 28690093
Alignment:
Q  127 tagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagac--ttttatgtactattcataagttggtcaaggtagt 224  Q
    |||||||| ||||||||| ||||| ||| || ||||||| ||  ||||||||||||||||| |   ||||||||| |||||||||||| |||||||||||    
T  28689961 tagggcccatttggattggcttattttttagtttatgcagaacagcttatgcaaataaatataaggttttatgtattattcataagtttgtcaaggtagt 28690060  T
Q  225 ttatgaaaaaacagcttatgaagatacaatttt 257  Q
    ||||||| |||||||||||||||||||||||||    
T  28690061 ttatgaacaaacagcttatgaagatacaatttt 28690093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 173 - 271
Target Start/End: Complemental strand, 15515428 - 15515330
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||| ||||||||  |||||||||| |||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  15515428 ttatgctaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaagagcttatgaagatacaattttcgttagtgagaact 15515330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 132 - 261
Target Start/End: Original strand, 18327488 - 18327617
Alignment:
Q  132 cccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 231  Q
    ||||||||||||||||||| || ||  |||| |||||  |||||||||||||||||  |||||||||| || ||||||| | |||||| |||||||||||    
T  18327488 cccgtttggattgacttattttggaatttattcaaaacagcttatgcaaataaataagcttttatgtattactcataagcttgtcaagatagtttatgaa 18327587  T
Q  232 aaaacagcttatgaagatacaattttcgtt 261  Q
    ||||||||||||||| | ||||||||||||    
T  18327588 aaaacagcttatgaacacacaattttcgtt 18327617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 6337839 - 6337739
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    ||||||| |||||||||  |||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||    
T  6337839 gcttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttagcgagaac 6337740  T
Q  271 t 271  Q
    |    
T  6337739 t 6337739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 135 - 271
Target Start/End: Original strand, 37712035 - 37712170
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 234  Q
    ||||||||||| |||| |||||||| ||| ||||  | |||||||||| ||||  |||||||||| |||||||||| | |||||||||||||||||||||    
T  37712035 gtttggattgatttatttttgagctaatgaaaaacagtttatgcaaatgaataagcttttatgta-tattcataagcttgtcaaggtagtttatgaaaaa 37712133  T
Q  235 acagcttatgaagatacaattttcgttattgagaact 271  Q
    ||| ||||||||||||||| |||||||| | ||||||    
T  37712134 acaacttatgaagatacaactttcgttagtaagaact 37712170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 173 - 271
Target Start/End: Complemental strand, 37329493 - 37329395
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||||||||   |||||||||| |||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  37329493 ttatgcaaataaatgagcttttatgtattattcataaacttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttggtgagaact 37329395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 134 - 262
Target Start/End: Original strand, 26988123 - 26988242
Alignment:
Q  134 cgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 233  Q
    |||||||||||| |||| |||||||||||||||||         ||||||||||  |||||||||  |||||||||| | ||||||||||||||||||||    
T  26988123 cgtttggattgaattatttttgagcttatgcaaaa---------caaataaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaa 26988213  T
Q  234 aacagcttatgaagatacaattttcgtta 262  Q
    |||||||||||||||||||||| ||||||    
T  26988214 aacagcttatgaagatacaattgtcgtta 26988242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 48819302 - 48819402
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    ||||||||||||||||   |||| ||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||    
T  48819302 gcttatgcaaataaatgagctttaatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacattttttgttagtgagaac 48819401  T
Q  271 t 271  Q
    |    
T  48819402 t 48819402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 3069937 - 3069837
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    |||||| ||||||| ||  |||| ||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||  || |||||||    
T  3069937 gcttatacaaataagtaagctttaatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcactagtgagaac 3069838  T
Q  271 t 271  Q
    |    
T  3069837 t 3069837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 177 - 269
Target Start/End: Complemental strand, 16889042 - 16888951
Alignment:
Q  177 gcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaa 269  Q
    |||||||||||  |||||||||| |||||||||| | || |||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  16889042 gcaaataaataagcttttatgtattattcataagcttgt-aaggtagtttatgaaaaaacagcttatgaagatacaattttcattagtgagaa 16888951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 146 - 269
Target Start/End: Original strand, 49971229 - 49971352
Alignment:
Q  146 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 245  Q
    ||||| || ||||||||||||||   ||||||||||||||||  | ||||| || |||| ||||| | || || ||||||||||||||||||||||| ||    
T  49971229 cttattttagagcttatgcaaaacaacttatgcaaataaatattcctttatttattatttataagcttgttaatgtagtttatgaaaaaacagcttacga 49971328  T
Q  246 agatacaattttcgttattgagaa 269  Q
    ||||||||||||||||| ||||||    
T  49971329 agatacaattttcgttagtgagaa 49971352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 128 - 269
Target Start/End: Original strand, 13038907 - 13039048
Alignment:
Q  128 agggcccgtttggattga-cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttt 226  Q
    |||| ||||||||||||| ||||| || ||| ||||||||||  ||| |||||||||||||  ||||||| || ||||||| || | || ||||||||||    
T  13038907 agggaccgtttggattgagcttatgtt-gaggttatgcaaaacggctgatgcaaataaataagcttttatatattattcatgagcttgttaaggtagttt 13039005  T
Q  227 atgaaaaaacagcttatgaagatacaattttcgttattgagaa 269  Q
    ||||||||||| |||||||||||| | ||||||||| ||||||    
T  13039006 atgaaaaaacaacttatgaagataaagttttcgttagtgagaa 13039048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 126 - 268
Target Start/End: Original strand, 15791342 - 15791483
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 225  Q
    |||||||||||||||||| |||||| || ||||||||  ||||  ||||||| |||||||||   ||||||||| |||| |||||||  | |||||||||    
T  15791342 ttagggcccgtttggattaacttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataagtt-tttaaggtagtt 15791440  T
Q  226 tatgaaaaaacagcttatgaagatacaattttcgttattgaga 268  Q
    ||||||||||  | | ||||||||||||||||||||| |||||    
T  15791441 tatgaaaaaatcgttaatgaagatacaattttcgttaatgaga 15791483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 125 - 271
Target Start/End: Original strand, 17814148 - 17814293
Alignment:
Q  125 tttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 224  Q
    |||||||| |||||||||  |||||| || ||||||||  ||||  ||||||||||||||||| | ||||||||| |||| |||||||  | ||||||||    
T  17814148 tttagggctcgtttggataaacttattttagagcttatataaaacagcttatgcaaataaatacatttttatgtattatttataagtt-tttaaggtagt 17814246  T
Q  225 ttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||||  | ||||||| ||||||||||||||| | ||||||    
T  17814247 ttatgaaaaaatgggttatgaaaatacaattttcgttagtcagaact 17814293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 126 - 268
Target Start/End: Complemental strand, 32497399 - 32497258
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 225  Q
    |||| |||| ||||||||  ||||| || ||||||||  ||||  |||||||||||||||||   ||||||||| |||| |||||||  | |||||||||    
T  32497399 ttagagcccatttggattagcttattttggagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataagttttt-aaggtagtt 32497301  T
Q  226 tatgaaaaaacagcttatgaagatacaattttcgttattgaga 268  Q
    ||||||||||||| |||||| |||||||||||||||| |||||    
T  32497300 tatgaaaaaacagtttatgaggatacaattttcgttagtgaga 32497258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 171 - 269
Target Start/End: Complemental strand, 36423064 - 36422966
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaa 269  Q
    |||||||||||||||||  ||||||| || |||||||||||| || ||||||||||||||| ||||| |||||||||||| || |||||||| ||||||    
T  36423064 gcttatgcaaataaataagcttttatttattattcataagtttgttaaggtagtttatgaataaacaacttatgaagataaaaatttcgttagtgagaa 36422966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 191 - 268
Target Start/End: Complemental strand, 41196773 - 41196696
Alignment:
Q  191 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgaga 268  Q
    ||||||||| |||||||||| | ||||| |||||||||||||||||||||||||||||||||||||| |||| |||||    
T  41196773 ttttatgtattattcataagcttgtcaatgtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgaga 41196696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 153 - 271
Target Start/End: Complemental strand, 9572886 - 9572767
Alignment:
Q  153 ttgagcttatgcaaaaatgcttatgcaaataaatagactttt-atgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 251  Q
    ||||||||||||||||  |||| ||||||||||||  ||||| || || |||||||||||| || |||||||||||||||||||||  |||||||||||     
T  9572886 ttgagcttatgcaaaacagcttttgcaaataaataagctttttatttattattcataagtttgttaaggtagtttatgaaaaaacaatttatgaagataa 9572787  T
Q  252 aattttcgttattgagaact 271  Q
    | |||| |||| ||||||||    
T  9572786 agtttttgttagtgagaact 9572767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 155 - 262
Target Start/End: Original strand, 51162256 - 51162363
Alignment:
Q  155 gagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaat 254  Q
    |||||||||||||   |||||||||||||||||  | || ||||| |||| | ||||| || ||||||||||||||||||||| |||||||| |||||||    
T  51162256 gagcttatgcaaagtagcttatgcaaataaataagcattaatgtattatttacaagtttgttaaggtagtttatgaaaaaacaacttatgaatatacaat 51162355  T
Q  255 tttcgtta 262  Q
    ||||||||    
T  51162356 tttcgtta 51162363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 136 - 261
Target Start/End: Original strand, 1321510 - 1321635
Alignment:
Q  136 tttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcat-aagttggtcaaggtagtttatgaaaaa 234  Q
    ||||||||||||||| |||||||||| ||||||  ||||||||||||||||| |  || ||||| ||||||| ||||| ||||||||||| |||||||||    
T  1321510 tttggattgacttatttttgagcttacgcaaaatggcttatgcaaataaata-agcttgatgtattattcataaagtttgtcaaggtagtgtatgaaaaa 1321608  T
Q  235 acagcttatgaagatacaattttcgtt 261  Q
     ||||||||  | |||||| |||||||    
T  1321609 gcagcttattgaaatacaactttcgtt 1321635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 133 - 271
Target Start/End: Original strand, 16225474 - 16225610
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 232  Q
    |||||||||||||||||| || ||||||||||||||  | ||||| |||||||||   ||||||||| || | ||||||| || |||||| |||| ||||    
T  16225474 ccgtttggattgacttattttagagcttatgcaaaacagtttatgtaaataaataagtttttatgtattaattataagtt-gttaaggtaatttaggaaa 16225572  T
Q  233 aaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||| ||||||||||||| | |||||||| ||||||||    
T  16225573 aaacaacttatgaagatac-agtttcgttagtgagaact 16225610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 127 - 268
Target Start/End: Complemental strand, 17628551 - 17628411
Alignment:
Q  127 tagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttt 226  Q
    |||||| ||||||||||   |||| || ||||||||  ||||  |||||| ||||||||||   ||||||||| |||| |||||||  | ||||||||||    
T  17628551 tagggctcgtttggattagattattttagagcttatataaaacagcttatacaaataaataagtttttatgtattatttataagttttt-aaggtagttt 17628453  T
Q  227 atgaaaaaacagcttatgaagatacaattttcgttattgaga 268  Q
    |||||||||| | ||||||||||||||||||||||| |||||    
T  17628452 atgaaaaaaccgtttatgaagatacaattttcgttagtgaga 17628411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 45267468 - 45267569
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa-aacagcttatgaagatacaattttcgttattgagaa 269  Q
    |||||||||||||||||  |||||  ||| |||| || || | |||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||    
T  45267468 gcttatgcaaataaataagctttttagtattatttattagcttgtcaaggtagtttatgaaaaaaacagcttatgaagatacaattttcgttagtaagaa 45267567  T
Q  270 ct 271  Q
    ||    
T  45267568 ct 45267569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 1005343 - 1005443
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    |||||||||||||||||  |||||| ||| |||||||||| | ||| |||||||| ||||||||||  ||||||||||||||||||| | || |||||||    
T  1005343 gcttatgcaaataaataagcttttacgtattattcataagcttgtctaggtagttaatgaaaaaactacttatgaagatacaatttttgatagtgagaac 1005442  T
Q  271 t 271  Q
    |    
T  1005443 t 1005443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 127 - 271
Target Start/End: Original strand, 5347114 - 5347257
Alignment:
Q  127 tagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttt 226  Q
    |||||| ||||||||||  ||||| || ||||||||  ||||   |||||||||||||||| | ||||||||| |||| |||||||  | ||||||||||    
T  5347114 tagggctcgtttggattagcttattttagagcttatataaaataacttatgcaaataaatacatttttatgtattatttataagttttt-aaggtagttt 5347212  T
Q  227 atgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||  | ||||||| ||||||||||||||| | ||||||    
T  5347213 atgaaaaaatgggttatgaaaatacaattttcgttaatcagaact 5347257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 127 - 262
Target Start/End: Complemental strand, 5243530 - 5243396
Alignment:
Q  127 tagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttt 226  Q
    ||||||| ||||| |||  ||||| || ||||||||  ||||  |||||||||||||||||   |||| |||| |||| |||||||  | ||||||||||    
T  5243530 tagggcctgtttgaattagcttattttagagcttatataaaacagcttatgcaaataaataagtttttgtgtattatttataagttttt-aaggtagttt 5243432  T
Q  227 atgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    ||||||||| || |||||||||||||||||||||||    
T  5243431 atgaaaaaatagtttatgaagatacaattttcgtta 5243396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 152 - 271
Target Start/End: Original strand, 20169248 - 20169367
Alignment:
Q  152 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 251  Q
    |||||||||||| ||||  |||||||||||||||||  |||||||||| |||| |||||||  | ||  |||||||||||||||||| |||| || ||||    
T  20169248 tttgagcttatgaaaaacagcttatgcaaataaataagcttttatgtattatttataagtttttaaatatagtttatgaaaaaacagtttataaatatac 20169347  T
Q  252 aattttcgttattgagaact 271  Q
    ||||| ||| | ||||||||    
T  20169348 aatttccgtcaatgagaact 20169367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 133 - 271
Target Start/End: Original strand, 46473059 - 46473197
Alignment:
Q  133 ccgtttggattga-cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 231  Q
    ||||||||||||| ||||| |||||||||||||||||  |||| || |||||||||  ||||||| || ||||||| || |  | |||||||| ||||||    
T  46473059 ccgtttggattgagcttat-tttgagcttatgcaaaacagcttgtgtaaataaataagcttttatttattattcatgaggtttttaaggtagtatatgaa 46473157  T
Q  232 aaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||| |||||||||||| | ||||||||| | ||||||    
T  46473158 aaaacaacttatgaagataaagttttcgttaataagaact 46473197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 173 - 262
Target Start/End: Original strand, 50919493 - 50919581
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    |||||||||||||| || |||| | || |||| ||||||| ||||| ||||||||| ||||||||| |||||||||||||||||||||||    
T  50919493 ttatgcaaataaat-gagttttttatattatttataagtttgtcaatgtagtttataaaaaaacaggttatgaagatacaattttcgtta 50919581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 135 - 271
Target Start/End: Original strand, 26542940 - 26543076
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 234  Q
    |||||||||||||||| |  ||||| ||  ||||   ||||||||||||||||  |||||||||| |||  ||||||| || || |||||||||||||||    
T  26542940 gtttggattgacttatttgagagctgatataaaacaacttatgcaaataaatatgcttttatgtattatatataagtttgttaatgtagtttatgaaaaa 26543039  T
Q  235 acagcttatgaagatacaattttcgttattgagaact 271  Q
    ||| |||| |||  |||||||||||||| ||| ||||    
T  26543040 acaacttaagaaagtacaattttcgttagtgaaaact 26543076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 134 - 268
Target Start/End: Original strand, 15631870 - 15632004
Alignment:
Q  134 cgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 233  Q
    |||||| ||| | |||| || |||||||| |||||   ||||| ||||||||||   ||||||||| |||| ||||||| || || ||| ||||||||||    
T  15631870 cgtttgaattaatttattttagagcttatacaaaacaacttatacaaataaataagtttttatgtattatttataagtttgttaatgtattttatgaaaa 15631969  T
Q  234 aacagcttatgaagatacaattttcgttattgaga 268  Q
    ||| | ||||||| ||||||||||||||| |||||    
T  15631970 aactgtttatgaaaatacaattttcgttagtgaga 15632004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 18317034 - 18317104
Alignment:
Q  201 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||| | |||||||||| ||||||||||||| | |||||||||||||| ||||||| ||||||||    
T  18317034 tattcataagattgtcaaggtaggttatgaaaaaacatcctatgaagatacaatattcgttaatgagaact 18317104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 153 - 271
Target Start/End: Complemental strand, 46689651 - 46689533
Alignment:
Q  153 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 252  Q
    ||||||||||||||||  | ||||||||||||| |  ||||||| || ||||||| || | || |||||| ||||| | |||||| |||||||| ||| |    
T  46689651 ttgagcttatgcaaaacagtttatgcaaataaaaaagcttttatttattattcatgagcttgttaaggtattttataataaaacaacttatgaaaataaa 46689552  T
Q  253 attttcgttattgagaact 271  Q
    |||||||||| ||||||||    
T  46689551 attttcgttagtgagaact 46689533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 232
Target Start/End: Complemental strand, 1265812 - 1265715
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 232  Q
    ||||| |||||||||| |||||||||||||||||   ||||| |||| | |||   ||||||||| ||||||||| || |||||||||||||||||||    
T  1265812 gtttgaattgacttatttttgagcttatgcaaaacaacttatacaaacagataagattttatgtattattcataattttgtcaaggtagtttatgaaa 1265715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 196 - 257
Target Start/End: Original strand, 23544819 - 23544880
Alignment:
Q  196 tgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaatttt 257  Q
    |||| |||||||||| | ||||||||||||||||||||||||||||||||| ||||| ||||    
T  23544819 tgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaaaatacattttt 23544880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 257
Target Start/End: Complemental strand, 35282722 - 35282591
Alignment:
Q  125 tttagggcccgtttggattga-cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtag 223  Q
    |||||||||||||||||| || ||||| ||||| ||| |||||||  |||||||||||||||||  | ||||| || |||| ||||    || |||||||    
T  35282722 tttagggcccgtttggatggagcttat-tttgaactt-tgcaaaacagcttatgcaaataaataagcgtttatttattatttataaacatgttaaggtag 35282625  T
Q  224 tttatgaaaaaacagcttatgaagatacaatttt 257  Q
    |||||||||||||| |||||||||||| ||||||    
T  35282624 tttatgaaaaaacaacttatgaagataaaatttt 35282591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 129 - 224
Target Start/End: Original strand, 391129 - 391225
Alignment:
Q  129 gggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaat-agacttttatgtactattcataagttggtcaaggtagt 224  Q
    |||||||||||||||| ||||| |||||| ||||||||||  |||||||||||||||| ||  |||||| || |||||||||| | ||||| |||||    
T  391129 gggcccgtttggattggcttatttttgaggttatgcaaaacagcttatgcaaataaataagctttttatatattattcataagcttgtcaatgtagt 391225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 172 - 271
Target Start/End: Original strand, 10082254 - 10082354
Alignment:
Q  172 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg-aaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    ||||||||||||||||   ||||||||  |||| ||||||| |||||||||||||||| |||||||| |||||||| ||||| |||| |||  |||||||    
T  10082254 cttatgcaaataaataagtttttatgtgttattgataagtttgtcaaggtagtttatgaaaaaaacaacttatgaaaatacatttttggttcgtgagaac 10082353  T
Q  271 t 271  Q
    |    
T  10082354 t 10082354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 130 - 262
Target Start/End: Original strand, 10365133 - 10365264
Alignment:
Q  130 ggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg 229  Q
    |||| |||||||||| || || ||| |||||||| ||||    |||||||||| |||| ||||||||||| |||| ||||| | ||||| ||||||||||    
T  10365133 ggcctgtttggattgcctaatttttcagcttatgtaaaataatttatgcaaatgaataaacttttatgtattattaataagcttgtcaaagtagtttatg 10365232  T
Q  230 aaaaaacagcttatgaagatacaattttcgtta 262  Q
     ||||||| |  ||||| |||||||||||||||    
T  10365233 -aaaaacaaccgatgaatatacaattttcgtta 10365264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 152 - 271
Target Start/End: Complemental strand, 10850173 - 10850049
Alignment:
Q  152 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaaca-----gcttatgaa 246  Q
    |||||||||||||||||  | || ||||||||||||  |||||||||| |||||||||| | ||||| |||||||||| ||||| |     | |||||||    
T  10850173 tttgagcttatgcaaaatagtttttgcaaataaataagcttttatgtattattcataaggttgtcaacgtagtttatggaaaaaaaaacttgtttatgaa 10850074  T
Q  247 gatacaattttcgttattgagaact 271  Q
     ||||||||||||||| ||| ||||    
T  10850073 aatacaattttcgttaatgaaaact 10850049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 22593490 - 22593390
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    ||||||||||||||||| | ||||||||| |||||||||| | || || | |||||| |||||| ||  |||| ||||||||||||| |||| |||||||    
T  22593490 gcttatgcaaataaataaatttttatgtattattcataagcttgtaaatgcagtttacgaaaaatcactttataaagatacaatttttgttagtgagaac 22593391  T
Q  271 t 271  Q
    |    
T  22593390 t 22593390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 136 - 259
Target Start/End: Complemental strand, 37157036 - 37156915
Alignment:
Q  136 tttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa 235  Q
    ||||||||||||||| ||  ||||||||||||   |||||||||||||||||  | || ||||| |||| ||||||  || ||||||||||||||||||     
T  37157036 tttggattgacttattttaaagcttatgcaaagcagcttatgcaaataaataagcattaatgtattatttataagtatgttaaggtagtttatgaaaaa- 37156938  T
Q  236 cagcttatgaagatacaattttcg 259  Q
     | | |||||| ||||||||||||    
T  37156937 -aacctatgaatatacaattttcg 37156915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 130 - 198
Target Start/End: Complemental strand, 37712248 - 37712180
Alignment:
Q  130 ggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    |||| |||||||||||||||| |||||||||| | ||||  ||||||||||||||||| ||||||||||    
T  37712248 ggcctgtttggattgacttatttttgagcttacgaaaaatagcttatgcaaataaataaacttttatgt 37712180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 136 - 271
Target Start/End: Original strand, 41003356 - 41003490
Alignment:
Q  136 tttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtc-aaggtagtttatgaaaaa 234  Q
    |||||| || ||||| |||| |||| ||||||||  ||||||||||||||||   ||||||||| |||| ||||||| ||| ||||||||||||| ||||    
T  41003356 tttggaatgtcttatttttg-gcttgtgcaaaaaaacttatgcaaataaataagtttttatgtattatttataagtttgtcaaaggtagtttatg-aaaa 41003453  T
Q  235 acagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||  |||||| ||||||  ||| ||||||||    
T  41003454 acagcttactaagatataatttttattagtgagaact 41003490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 259
Target Start/End: Complemental strand, 1565504 - 1565376
Alignment:
Q  130 ggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg 229  Q
    ||||| ||||||||||||||  | |||||||||| || |  ||||||| ||||||| |  |||||||| | ||||| |||| | ||||||||||||||||    
T  1565504 ggcccatttggattgacttacttctgagcttatgaaaca--gcttatgtaaataaacaagcttttatgcattattcgtaagcttgtcaaggtagtttatg 1565407  T
Q  230 aa-aaaacagcttatgaagatacaattttcg 259  Q
    || |||| | | |||||||||||||||||||    
T  1565406 aaaaaaataacatatgaagatacaattttcg 1565376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 262
Target Start/End: Complemental strand, 3116144 - 3116054
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    ||||||||||||||||| | ||||||||  | || |||||||  | ||||||||||||||||||||   |||||||||||||||||||||||    
T  3116144 gcttatgcaaataaataaatttttatgttttgtttataagttttt-aaggtagtttatgaaaaaaccatttatgaagatacaattttcgtta 3116054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 262
Target Start/End: Complemental strand, 31378834 - 31378743
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    |||||||||||||||||  ||||||| || |||| | ||| | ||||||||||||||||||||||  | |||| ||||||||||||| ||||    
T  31378834 gcttatgcaaataaataagcttttatatattattaacaagcttgtcaaggtagtttatgaaaaaaacgtttataaagatacaatttttgtta 31378743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 37148211 - 37148112
Alignment:
Q  136 tttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa 235  Q
    ||||||||||||||| ||  ||||||||||||   |||||||||||||||||  | || ||||| |||| ||||||  || |||||||||||||||||||    
T  37148211 tttggattgacttattttaaagcttatgcaaagcagcttatgcaaataaataagcattaatgtattatttataagtatgttaaggtagtttatgaaaaaa 37148112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 39658376 - 39658317
Alignment:
Q  201 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgt 260  Q
    |||||||||| | | ||||||| |||||||||||||||||||||||| ||||||||||||    
T  39658376 tattcataagcttgccaaggtaatttatgaaaaaacagcttatgaaggtacaattttcgt 39658317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 28690187 - 28690117
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    |||| |||||||||||||||| | |||||||||||| ||||  |||||||||||||||||  |||||||||    
T  28690187 aggggccgtttggattgacttgtttttgagcttatgaaaaatagcttatgcaaataaataagcttttatgt 28690117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 37329315 - 37329385
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    ||||||||||||||| ||||||| |||||||||||| ||||   ||||||||||||||||  |||||||||    
T  37329315 agggcccgtttggatcgacttatttttgagcttatgaaaaataacttatgcaaataaataagcttttatgt 37329385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 133 - 198
Target Start/End: Original strand, 35897527 - 35897592
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    |||||||||||||||||| ||||| |||||| ||||  ||||||| ||||||||| ||||||||||    
T  35897527 ccgtttggattgacttatttttgaacttatgaaaaatagcttatgtaaataaataaacttttatgt 35897592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 36259372 - 36259283
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    ||||| ||||||||| | ||||||||| ||||| ||| || || |  ||||||||||||||||||| |||| || |||||||||||||||    
T  36259372 ttatgtaaataaataaatttttatgtattattcttaactttgtaagtgtagtttatgaaaaaacagtttataaacatacaattttcgtta 36259283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 6900693 - 6900625
Alignment:
Q  129 gggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatg 197  Q
    ||||| |||||||||||||||  |||||| ||||||||||   |||||||||||||||| |||||||||    
T  6900693 gggcctgtttggattgacttacttttgagattatgcaaaacgacttatgcaaataaatacacttttatg 6900625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 258
Target Start/End: Original strand, 16708765 - 16708889
Alignment:
Q  134 cgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 233  Q
    ||||||||||||||||  || ||||||||  |||   ||||||||||||||| | |  || |||||||||| |||| |  || ||||| |||||||||||    
T  16708765 cgtttggattgacttaatttagagcttatataaaccggcttatgcaaataaagaaatattaatgtactatttataaatctgttaaggttgtttatgaaaa 16708864  T
Q  234 aacagcttatgaagatacaattttc 258  Q
    ||||  ||||||| |||||||||||    
T  16708865 aacaatttatgaatatacaattttc 16708889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 19284853 - 19284992
Alignment:
Q  125 tttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 224  Q
    |||| |||||||||| ||| |||||  || ||||||||  ||||  ||||||  |||||||||  || ||||||| |||| ||||||| || ||| || |    
T  19284853 tttatggcccgtttgaattaacttactttagagcttatataaaacagcttatataaataaataagctattatgtattatttataagtttgttaagatatt 19284952  T
Q  225 ttatgaaaaaa--cagcttatgaagatacaattttcgtta 262  Q
    |||| ||||||  ||| |||||||||||||||||||||||    
T  19284953 ttataaaaaaaaacagtttatgaagatacaattttcgtta 19284992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 22103114 - 22103212
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    ||||||| ||||||||| | ||||||||| |||| |||||||  | ||||||||||||||||||  || ||||||| ||||||||||||||| | |||||    
T  22103114 gcttatgtaaataaatacatttttatgtattatttataagttttt-aaggtagtttatgaaaaatgag-ttatgaaaatacaattttcgttagttagaac 22103211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 14461075 - 14461024
Alignment:
Q  220 gtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||||||||||||| |||| |||||||||||||| ||| ||||||||    
T  14461075 gtagtttatgaaaaaacagtttataaagatacaattttcattagtgagaact 14461024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 171 - 262
Target Start/End: Original strand, 28122619 - 28122710
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    ||||||||||||||||   ||||||| || ||||||| || |  | ||||||||||||||||||| | ||||| |||||| |||||||||||    
T  28122619 gcttatgcaaataaattagcttttatttattattcatgagcttcttaaggtagtttatgaaaaaataacttataaagataaaattttcgtta 28122710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 174 - 245
Target Start/End: Original strand, 39941516 - 39941587
Alignment:
Q  174 tatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 245  Q
    |||||||||||||  | ||||||||| |||||||||| | ||||| |||||| ||||||||||| |||||||    
T  39941516 tatgcaaataaatgaatttttatgtattattcataagcttgtcaaagtagttaatgaaaaaacaacttatga 39941587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 41196613 - 41196672
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 187  Q
    ||||||| ||||||||| ||||| |||||||||||| ||||  |||||||||||||||||    
T  41196613 agggcccatttggattggcttatttttgagcttatgtaaaatagcttatgcaaataaata 41196672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 135 - 198
Target Start/End: Complemental strand, 47413548 - 47413485
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    |||||||||| ||||| |||||||||||| ||||  |||||||||||||||||  |||||||||    
T  47413548 gtttggattggcttatttttgagcttatgaaaaatagcttatgcaaataaataagcttttatgt 47413485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 1683947 - 1683893
Alignment:
Q  208 aagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    ||||| ||||||||||||||||||||||||| |||| ||  ||||||||||||||    
T  1683947 aagtttgtcaaggtagtttatgaaaaaacagtttataaaactacaattttcgtta 1683893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 259
Target Start/End: Original strand, 25485733 - 25485839
Alignment:
Q  153 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 252  Q
    |||| ||||| |||||  ||||||||||||||||| | |||||| |  ||||||| |  |  | |||||||||||||||||||||  ||||||||||| |    
T  25485733 ttgaacttatacaaaagagcttatgcaaataaataaatttttatttgttattcatgaccttattaaggtagtttatgaaaaaacaatttatgaagataaa 25485832  T
Q  253 attttcg 259  Q
    |||||||    
T  25485833 attttcg 25485839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 198
Target Start/End: Original strand, 26435086 - 26435148
Alignment:
Q  136 tttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    ||||||||||||||| ||| |||||||| ||||  | |||||||||||||||||||| |||||    
T  26435086 tttggattgacttatttttaagcttatgaaaaatagtttatgcaaataaatagacttatatgt 26435148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 261
Target Start/End: Original strand, 29333444 - 29333510
Alignment:
Q  195 atgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtt 261  Q
    ||||| |||| ||||||| || ||| ||| ||||||||||||| |||||||| ||||||||||||||    
T  29333444 atgtattatttataagtttgttaagatagcttatgaaaaaacaacttatgaatatacaattttcgtt 29333510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 39941447 - 39941509
Alignment:
Q  174 tatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaac 236  Q
    |||||||||||||  ||||||||||| |||||||||| | |||||  ||||||||||||||||    
T  39941447 tatgcaaataaatgaacttttatgtattattcataagcttgtcaaaatagtttatgaaaaaac 39941509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 262
Target Start/End: Original strand, 42591370 - 42591476
Alignment:
Q  156 agcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaatt 255  Q
    ||||||| |||||  |||| | ||| ||||||  ||||||  || |||| ||||||| || |||||| |||||||||||| || ||||||||||||| ||    
T  42591370 agcttatacaaaacagcttgtacaagtaaataagcttttacatattatttataagtttgttaaggtattttatgaaaaaatagtttatgaagatacactt 42591469  T
Q  256 ttcgtta 262  Q
    |||||||    
T  42591470 ttcgtta 42591476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 134 - 231
Target Start/End: Complemental strand, 35897743 - 35897646
Alignment:
Q  134 cgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 231  Q
    |||||||||||| |||| ||| || ||||||||||   ||||||||||||||||   |||||| || |||||||||| |  |||| ||||||||||||    
T  35897743 cgtttggattgatttatttttaaggttatgcaaaacaacttatgcaaataaataagtttttatttattattcataagcttttcaaagtagtttatgaa 35897646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 173 - 258
Target Start/End: Complemental strand, 46501082 - 46500997
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttc 258  Q
    ||||| ||||||||   ||||| |||| |||| ||||| | ||||  |||||||||||||||| || |||||||||||||||||||    
T  46501082 ttatgtaaataaatgagcttttttgtattatttataagcttgtcattgtagtttatgaaaaaataggttatgaagatacaattttc 46500997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 129 - 198
Target Start/End: Complemental strand, 48819481 - 48819412
Alignment:
Q  129 gggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    ||||| |||||||||| ||||| ||| |||||||| ||||  |||||||||||||||||  |||||||||    
T  48819481 gggccggtttggattggcttattttttagcttatgaaaaatagcttatgcaaataaataagcttttatgt 48819412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 4068298 - 4068230
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttat 196  Q
    ||||||||||||||||| ||||| ||| || ||||| |||   ||||||||||||||||| ||||||||    
T  4068298 agggcccgtttggattggcttattttttagtttatgaaaagtagcttatgcaaataaataaacttttat 4068230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 172 - 268
Target Start/End: Complemental strand, 13412534 - 13412439
Alignment:
Q  172 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgaga 268  Q
    |||||||||||| ||| | ||||||||| |||| |||||||  | ||||||||||||||||||||   | |||||||||||| ||| |||| |||||    
T  13412534 cttatgcaaatacataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccattcatgaagatacaaattttgttagtgaga 13412439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 18317181 - 18317114
Alignment:
Q  131 gcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    ||||||||||||||||||| ||||||||||| | ||| |  ||||||| |||||||| || |||||||    
T  18317181 gcccgtttggattgacttagctttgagcttaagaaaataaacttatgccaataaataaacgtttatgt 18317114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 26988324 - 26988273
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaat 186  Q
    |||||||||||||||| |||||||||||| ||||  | ||||||||||||||    
T  26988324 gtttggattgacttatttttgagcttatgaaaaatagtttatgcaaataaat 26988273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 38781130 - 38781181
Alignment:
Q  220 gtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||||||||| ||||||||||||  |||||||| |||| ||||||||    
T  38781130 gtagtttatgaaaaatcagcttatgaagccacaattttggttagtgagaact 38781181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 258
Target Start/End: Original strand, 41130017 - 41130084
Alignment:
Q  191 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttc 258  Q
    ||||||||| |||||||||| |  || |||| |||||||  |||||| ||||||||||||||||||||    
T  41130017 ttttatgtattattcataagcttctctaggtggtttatgtcaaaacaacttatgaagatacaattttc 41130084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 136 - 198
Target Start/End: Complemental strand, 23544965 - 23544904
Alignment:
Q  136 tttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    |||||||||| |||| |||||||| ||| |||| ||||||||||||||||||  |||||||||    
T  23544965 tttggattgatttatttttgagctcatg-aaaattgcttatgcaaataaataagcttttatgt 23544904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 12256585 - 12256709
Alignment:
Q  146 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 245  Q
    ||||| || ||||||||||||||   |||||| |||||| ||  ||||||| || |||| ||||| | ||  | |||||||||| |||||||  ||||||    
T  12256585 cttattttagagcttatgcaaaacaacttatgtaaataattatgcttttatatattatttataagattgttgatgtagtttatg-aaaaacaatttatga 12256683  T
Q  246 agatacaattttcgttattgagaact 271  Q
    || |||||||||||||| | ||||||    
T  12256684 aggtacaattttcgttagtaagaact 12256709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 187
Target Start/End: Complemental strand, 42367135 - 42367074
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 187  Q
    |||| |||||||||||||  ||||| ||| |||||||| ||||  |||||||||||||||||    
T  42367135 ttagagcccgtttggatttgcttatttttaagcttatgaaaaatagcttatgcaaataaata 42367074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 1565284 - 1565347
Alignment:
Q  134 cgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    ||||||||||| ||||| |||||||||||| ||||  |||| ||||||||||||  |||||||||    
T  1565284 cgtttggattggcttatttttgagcttatgaaaaatagctt-tgcaaataaataagcttttatgt 1565347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 46500901 - 46500973
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    |||| |||||||||||||||||||| ||| | |||||  ||||   ||||||||||||||||  |||||||||    
T  46500901 ttagagcccgtttggattgacttattttttatcttataaaaaataacttatgcaaataaataagcttttatgt 46500973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 47413400 - 47413460
Alignment:
Q  196 tgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattt 256  Q
    |||| |||| ||||| | ||||| ||||||||||||| ||||| ||||||||||| |||||    
T  47413400 tgtattatttataagcttgtcaatgtagtttatgaaataacaggttatgaagatataattt 47413460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 49738363 - 49738284
Alignment:
Q  191 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||| | |||||||||||| |||||  |||||| | |||||| |  ||||||| ||||||||||||||| ||||||||    
T  49738363 ttttatgaattattcataagtttgtcaaaatagtttgttaaaaaaaat-ttatgaaaatacaattttcgttagtgagaact 49738284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 51409790 - 51409730
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 231  Q
    |||||||||||||||||   || |||||| |||||||||||| || || ||||||||||||    
T  51409790 gcttatgcaaataaataagtttgtatgtattattcataagtttgtaaatgtagtttatgaa 51409730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 2e-35; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 127 - 271
Target Start/End: Original strand, 32131399 - 32131543
Alignment:
Q  127 tagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttt 226  Q
    |||| ||| ||||||||||||||| |||||||||||||||||  |||||||||||||||||  |||||||| | ||||| |||||| |||||||||||||    
T  32131399 taggacccatttggattgacttatttttgagcttatgcaaaacagcttatgcaaataaataagcttttatgcattattcctaagtttgtcaaggtagttt 32131498  T
Q  227 atgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||| ||||| | ||||||||||||||||||  || ||||||||    
T  32131499 atgaataaacaacctatgaagatacaattttcaatagtgagaact 32131543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 173 - 271
Target Start/End: Complemental strand, 10299007 - 10298909
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||||||||  |||||| ||||  ||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  10299007 ttatgcaaataaattaacttttttgtatcattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttaatgagaact 10298909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 126 - 268
Target Start/End: Original strand, 42102065 - 42102206
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 225  Q
    |||||||||||||||||| |||||| || ||||||||  ||||  |||||||||||||||||   ||||||||| |||| |||||||  | |||||||||    
T  42102065 ttagggcccgtttggattaacttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataagtt-tttaaggtagtt 42102163  T
Q  226 tatgaaaaaacagcttatgaagatacaattttcgttattgaga 268  Q
    ||||||||||| | | ||||||||||||||||||||| |||||    
T  42102164 tatgaaaaaaccgttaatgaagatacaattttcgttaatgaga 42102206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 136 - 271
Target Start/End: Complemental strand, 16972475 - 16972339
Alignment:
Q  136 tttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtc-aaggtagtttatgaaaaa 234  Q
    |||||||||  |||| ||| |||||||||||||    || ||||||||||||  ||| |||||| |||||||||||| ||| ||||||||| ||||||||    
T  16972475 tttggattgttttattttttagcttatgcaaaacaatttttgcaaataaataagcttgtatgtattattcataagtttgtctaaggtagttcatgaaaaa 16972376  T
Q  235 acagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||||||||||||||||||||| ||| ||||    
T  16972375 acagcttatgaagatacaattttcgttagtgataact 16972339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 156 - 271
Target Start/End: Original strand, 19327855 - 19327969
Alignment:
Q  156 agcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaatt 255  Q
    |||||||||||||   |||||||||||||||| ||||||||||| |||||||||||| || || |||||||||| |||||||| |||| |||||||||||    
T  19327855 agcttatgcaaaacaacttatgcaaataaataaacttttatgtattattcataagtttgt-aatgtagtttatggaaaaacagtttataaagatacaatt 19327953  T
Q  256 ttcgttattgagaact 271  Q
    || |||| ||||||||    
T  19327954 tttgttaatgagaact 19327969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 32975690 - 32975790
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    |||||||||||||||||  ||||||| || |||||||||| | |||||||||||||||||||| ||| ||||||||||||||||||| |||  |||||||    
T  32975690 gcttatgcaaataaataagcttttatatattattcataagcttgtcaaggtagtttatgaaaacacaacttatgaagatacaatttttgtttgtgagaac 32975789  T
Q  271 t 271  Q
    |    
T  32975790 t 32975790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 34286646 - 34286547
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    ||||||| |||||||||  |||||||||| |||||||||| | ||||||||||||| || ||||||||||||||||||||||||||||||||  ||||||    
T  34286646 gcttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttgtg-aaaaacagcttatgaagatacaattttcgttagggagaac 34286548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 35453413 - 35453488
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaa 246  Q
    |||||||||||||||||  |||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||    
T  35453413 gcttatgcaaataaataagcttttatgtattattcataagtttatcaaggtagtttatgaaaaaacagcttatgaa 35453488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 35168505 - 35168435
Alignment:
Q  190 cttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgt 260  Q
    |||||||||| |||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||    
T  35168505 cttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattttcgt 35168435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 133 - 271
Target Start/End: Complemental strand, 42363437 - 42363300
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 232  Q
    |||||||||||  ||||| || ||||||||  ||||  |||||||||||||||||   ||||||||| |||| |||||||  | ||||||||||||||||    
T  42363437 ccgtttggattagcttattttagagcttatataaaatagcttatgcaaataaataagtttttatgtattatttataagttttt-aaggtagtttatgaaa 42363339  T
Q  233 aaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||| | |||||||||||||||||| |||| ||||||||    
T  42363338 aaaccgtttatgaagatacaatttttgttagtgagaact 42363300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 133 - 271
Target Start/End: Original strand, 13131395 - 13131542
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtca---------aggtag 223  Q
    |||||||||||  ||||| ||| |||||||||||||    |||||||||||||||  |||||||||| |||||||||||| ||||         ||||||    
T  13131395 ccgtttggatttgcttattttttagcttatgcaaaacaaattatgcaaataaataagcttttatgtattattcataagtttgtcatgtcaaggtaggtag 13131494  T
Q  224 tttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||||||||||||||||| |||||||||| |||  ||||||||    
T  13131495 tttatgaaaaaacagcttatgaaaatacaatttttgtttgtgagaact 13131542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 171 - 249
Target Start/End: Original strand, 28879061 - 28879139
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagat 249  Q
    |||||||||||||||||  |||||||||| |||||||||| | ||||||||||||||||||| |||| |||||||||||    
T  28879061 gcttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaataacaacttatgaagat 28879139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 127 - 268
Target Start/End: Original strand, 12607039 - 12607179
Alignment:
Q  127 tagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttt 226  Q
    ||||||||||||| |||  ||||| || ||||||||  ||||  || ||||||||||||||   ||||||||| |||| |||||||  | ||||||||||    
T  12607039 tagggcccgtttgaattagcttattttagagcttatataaaacagcatatgcaaataaataagtttttatgtattatttataagttttt-aaggtagttt 12607137  T
Q  227 atgaaaaaacagcttatgaagatacaattttcgttattgaga 268  Q
    |||||||||| | ||||||||||||||||| ||||| |||||    
T  12607138 atgaaaaaacggtttatgaagatacaatttccgttagtgaga 12607179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 157 - 268
Target Start/End: Original strand, 19925546 - 19925657
Alignment:
Q  157 gcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattt 256  Q
    |||||| |||||  |||||||||||||||||  ||||||  || |||| ||||||| || |||||| |||| |||||||||  |||||||||||||||||    
T  19925546 gcttatacaaaacagcttatgcaaataaataagcttttaattattatttataagtttgttaaggtattttacgaaaaaacaatttatgaagatacaattt 19925645  T
Q  257 tcgttattgaga 268  Q
    |||||| |||||    
T  19925646 tcgttagtgaga 19925657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 128 - 271
Target Start/End: Complemental strand, 38338976 - 38338834
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 227  Q
    ||||||||||||||||  ||||| || ||||||||  ||||  |||||||||||||||||   |||||  || |||| |||||||  | |||||||||||    
T  38338976 agggcccgtttggattagcttattttagagcttatataaaacagcttatgcaaataaataagtttttaaatattatttataagttttt-aaggtagttta 38338878  T
Q  228 tgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||| || |||||||||||  |||||||||| ||||||||    
T  38338877 tgaaaaaatagtttatgaagatatgattttcgttagtgagaact 38338834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 152 - 258
Target Start/End: Complemental strand, 16706202 - 16706096
Alignment:
Q  152 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 251  Q
    |||||||||||||||||  |||||||||||||||||   ||||||||| |||||||||||| |  || |||||||||||||||||| | || ||| ||||    
T  16706202 tttgagcttatgcaaaacggcttatgcaaataaatatgtttttatgtattattcataagtttgaaaatgtagtttatgaaaaaacaacatacgaatatac 16706103  T
Q  252 aattttc 258  Q
    || ||||    
T  16706102 aactttc 16706096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 173 - 271
Target Start/End: Complemental strand, 24350600 - 24350502
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||||| ||  ||||||| || |||||||||| | ||||| ||| |||||||||||| |||||||||||||| ||||||||||| | ||||||    
T  24350600 ttatgcaaataattaagcttttatatattattcataagcttgtcaacgtaatttatgaaaaaatagcttatgaagatataattttcgttagtaagaact 24350502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 171 - 257
Target Start/End: Original strand, 35285931 - 35286017
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaatttt 257  Q
    |||||||||||||||||  ||||| |||  |||||||||| | ||||| ||||||||||||||||  ||||||||||||||||||||    
T  35285931 gcttatgcaaataaataagcttttgtgtgttattcataagctcgtcaaagtagtttatgaaaaaaatgcttatgaagatacaatttt 35286017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 133 - 262
Target Start/End: Complemental strand, 19925509 - 19925381
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 232  Q
    |||||||||||||||||| || ||||||||||| ||  | |||||||||||||||  | || ||||| |||| ||||  | || ||||||| ||||||||    
T  19925509 ccgtttggattgacttattttagagcttatgcataacagtttatgcaaataaataagcattaatgtattatttataaacttgttaaggtag-ttatgaaa 19925411  T
Q  233 aaacagcttatgaagatacaattttcgtta 262  Q
     |||| |||||||| |||||||||||||||    
T  19925410 taacaacttatgaatatacaattttcgtta 19925381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 24867011 - 24866934
Alignment:
Q  194 tatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||| |||| ||||| | || || |||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  24867011 tatgtattatttataagattgttaatgtagtttatgaaaaaacagcttatgaaggtacaattttcgttatcgagaact 24866934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 133 - 262
Target Start/End: Original strand, 30973954 - 30974083
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 232  Q
    |||||||||||| ||||| || |||||||||||||   ||||||| ||||||| |  | || ||||| |||| |||| || || |||| |||||||||||    
T  30973954 ccgtttggattggcttattttagagcttatgcaaagcagcttatgtaaataaagaagcattaatgtattatttataaatttgttaaggcagtttatgaaa 30974053  T
Q  233 aaacagcttatgaagatacaattttcgtta 262  Q
    ||||| ||||||||  ||||||||||||||    
T  30974054 aaacaacttatgaatttacaattttcgtta 30974083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 271
Target Start/End: Complemental strand, 14709663 - 14709520
Alignment:
Q  127 tagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttt 226  Q
    ||||||| ||||||||||| |||| |||||   ||  |||||  | |||||||| ||||||  |||||| |||| ||||||||| | |||||| ||||||    
T  14709663 tagggcctgtttggattgaattatttttgaatctacacaaaacagtttatgcaactaaataagcttttaagtacaattcataagcttgtcaagctagttt 14709564  T
Q  227 atgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||||||| ||||| |||||||||| |||| ||| ||||    
T  14709563 atgaaaaaacagctcatgaa-atacaattttagttagtgaaaact 14709520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 38895662 - 38895762
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    ||||||||||| ||||| |||||||| || |||||||||| | || ||||||||||||||||||| |  ||||||||||||||| || |||| ||| |||    
T  38895662 gcttatgcaaaaaaataaacttttatttattattcataagcttgttaaggtagtttatgaaaaaataatttatgaagatacaatatttgttagtgaaaac 38895761  T
Q  271 t 271  Q
    |    
T  38895762 t 38895762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 258
Target Start/End: Original strand, 2669651 - 2669738
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttc 258  Q
    |||||||||||||||||  || | ||||| |||| ||||||| || ||||||||||||||||||||| |||||||| ||||| |||||    
T  2669651 gcttatgcaaataaataagctctaatgtattatttataagtttgttaaggtagtttatgaaaaaacaacttatgaatatacatttttc 2669738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 262
Target Start/End: Complemental strand, 9131211 - 9131120
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    ||||||||||||| |||  |||||||||| |||| ||||| | ||| |  |||||| |||| ||||||||||||||||||||||||||||||    
T  9131211 gcttatgcaaatatataagcttttatgtattatttataagcttgtcgatttagtttctgaagaaacagcttatgaagatacaattttcgtta 9131120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 11988202 - 11988296
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgaga 268  Q
    |||||||||||||||   ||||||||| |||| |||||||  | ||||||||| |||||||||| | ||||||||||||||||||||||| |||||    
T  11988202 ttatgcaaataaataagtttttatgtattatttataagttttt-aaggtagttcatgaaaaaaccgtttatgaagatacaattttcgttagtgaga 11988296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 8217005 - 8216895
Alignment:
Q  154 tgagcttatgcaaaaatgcttatgcaaataaatagactttt-atgtactattcataagttggtc-aaggtagtttatgaaaaaacagcttatgaagatac 251  Q
    ||||||| |||||||  |||||||||||| ||||  ||||| ||||| |||||||||  | ||| ||||||||||||||||||  || ||||||||||||    
T  8217005 tgagcttgtgcaaaatagcttatgcaaattaataagctttttatgtattattcataatcttgtctaaggtagtttatgaaaaagtaggttatgaagatac 8216906  T
Q  252 aattttcgtta 262  Q
    |||||||||||    
T  8216905 aattttcgtta 8216895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 152 - 258
Target Start/End: Complemental strand, 32924314 - 32924208
Alignment:
Q  152 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 251  Q
    |||||||||||||||||  |||||||| ||||||||  ||||||| |  |||| ||||| | ||  | |||||||||||||||||| ||||||||||||     
T  32924314 tttgagcttatgcaaaacagcttatgcgaataaatatgcttttatttgttatttataagcttgtttatgtagtttatgaaaaaacaacttatgaagataa 32924215  T
Q  252 aattttc 258  Q
    |||||||    
T  32924214 aattttc 32924208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 262
Target Start/End: Original strand, 43577198 - 43577315
Alignment:
Q  145 acttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatg 244  Q
    |||||| || ||||||||||||||  | ||||||||||||||| |  || ||||| |||| |||| || || |||||||||||| |||||||| |||||     
T  43577198 acttattttagagcttatgcaaaatagtttatgcaaataaataaatattaatgtattatttataaatttgttaaggtagtttataaaaaaacaacttata 43577297  T
Q  245 aagatacaattttcgtta 262  Q
    || ||| |||||||||||    
T  43577298 aatataaaattttcgtta 43577315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 126 - 262
Target Start/End: Original strand, 3664094 - 3664229
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 225  Q
    ||||||||||||||||||  ||||| || ||||||||  ||||  | ||||||||||||||| | ||||||||| |||| |||||||  ||||  || ||    
T  3664094 ttagggcccgtttggattagcttattttagagcttatataaaatagtttatgcaaataaataaatttttatgtattatttataagtt-ttcaaactattt 3664192  T
Q  226 tatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    |||| |||||||  |||||||||| | ||||||||||    
T  3664193 tatggaaaaacaagttatgaagatgcgattttcgtta 3664229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 130 - 198
Target Start/End: Complemental strand, 28879236 - 28879168
Alignment:
Q  130 ggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    ||||||||||||||||||||| ||| |||||||| ||||  |||||||||||||||||  |||||||||    
T  28879236 ggcccgtttggattgacttattttttagcttatgaaaaatagcttatgcaaataaataagcttttatgt 28879168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 134 - 257
Target Start/End: Original strand, 2563324 - 2563447
Alignment:
Q  134 cgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 233  Q
    ||||||||||| ||||| || ||| ||||| ||||    ||||||||||||||| |  || ||||| |||| ||||||| || || ||||||||||||||    
T  2563324 cgtttggattggcttattttagaggttatgtaaaataatttatgcaaataaataaatattaatgtattatttataagtttgttaaagtagtttatgaaaa 2563423  T
Q  234 aacagcttatgaagatacaatttt 257  Q
    |||| ||| |||| ||||||||||    
T  2563424 aacaacttttgaatatacaatttt 2563447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 14942391 - 14942518
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 234  Q
    |||||||||| ||||| || ||||||||| ||||   |||||| | |||||||  ||||| |||| |||| ||||| | || ||| ||||||||||||||    
T  14942391 gtttggattggcttattttagagcttatgtaaaacaacttatgtatataaataagcttttgtgtattatttataagcttgttaagttagtttatgaaaaa 14942490  T
Q  235 acagcttatgaagatacaattttcgtta 262  Q
    ||  ||||||||||| ||||||| ||||    
T  14942491 acgacttatgaagatgcaatttttgtta 14942518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 271
Target Start/End: Complemental strand, 37411038 - 37410896
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 227  Q
    |||| |||||| ||||  ||||| || ||||||||  ||||  | ||||| |||||||||   ||||||||| |||| |||| ||  | |||||||||||    
T  37411038 agggaccgttttgattagcttattttagagcttatataaaacagtttatgtaaataaataagtttttatgtattatttataatttttt-aaggtagttta 37410940  T
Q  228 tgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||||| | ||||||||||||||||||||| | ||||||    
T  37410939 tgaaaaaacagttcatgaagatacaattttcgttagtaagaact 37410896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 13131626 - 13131556
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    ||||||||||||||||||||||| ||| |||||||| ||||  || ||||||||||||||  |||||||||    
T  13131626 agggcccgtttggattgacttatttttaagcttatgaaaaatagcatatgcaaataaataagcttttatgt 13131556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 16706001 - 16706073
Alignment:
Q  126 ttagggcccgtttggatt-gacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    |||||||||||||||||| | ||||| |||||||||||||||||  |||||||||||||||||  |||||||||    
T  16706001 ttagggcccgtttggattaggcttat-tttgagcttatgcaaaacagcttatgcaaataaatacgcttttatgt 16706073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 135 - 196
Target Start/End: Original strand, 16972266 - 16972327
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttat 196  Q
    |||||||||||||||  ||||||||||| |||||  ||||||||||||||||| ||||||||    
T  16972266 gtttggattgacttaattttgagcttattcaaaatagcttatgcaaataaataaacttttat 16972327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 25333771 - 25333715
Alignment:
Q  214 gtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||| ||| ||||    
T  25333771 gtcaaggtagtttatgaaaaa-caacttatgaagatacaattttcgttagtgaaaact 25333715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 41145481 - 41145379
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactatt---cataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgag 267  Q
    |||||||||||||||||  ||||||| || ||||   |||||||| || ||||||||||||||||||||| ||| | ||||||| |||||| ||| ||||    
T  41145481 gcttatgcaaataaataagcttttatttattattattcataagtttgttaaggtagtttatgaaaaaacaactt-taaagatacgattttcattagtgag 41145383  T
Q  268 aact 271  Q
    ||||    
T  41145382 aact 41145379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 247
Target Start/End: Original strand, 28280712 - 28280788
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaag 247  Q
    |||||||||||||||||  | |||||||| |||| ||||||| || || ||||||||||||||||| | ||||||||    
T  28280712 gcttatgcaaataaatatgcatttatgtattatttataagtttgttaatgtagtttatgaaaaaactgtttatgaag 28280788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 132 - 268
Target Start/End: Original strand, 38195451 - 38195586
Alignment:
Q  132 cccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 231  Q
    ||||||||||||  ||||| || ||||||||  ||||   ||||||||||||||||   |||||| || |||| |||||||  | ||||||||||| |||    
T  38195451 cccgtttggattagcttattttagagcttatataaaacaacttatgcaaataaataagtttttatatattatttataagttttt-aaggtagtttacgaa 38195549  T
Q  232 aaaacagcttatgaagatacaattttcgttattgaga 268  Q
    ||||||| ||||| | |||||||||| |||| |||||    
T  38195550 aaaacagtttatggaaatacaatttttgttaatgaga 38195586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 126 - 262
Target Start/End: Complemental strand, 36907776 - 36907636
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcat----aagttggtcaaggt 221  Q
    ||||||||| ||||||||| ||||| || |||||||||||||   | ||||||||||||| |    || ||||| |||| ||    || || || |||||    
T  36907776 ttagggcccatttggattggcttattttagagcttatgcaaagcagtttatgcaaataaagaagtattaatgtattatttatttataaatttgttaaggt 36907677  T
Q  222 agtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    |||||||||||||||| ||| |||| |||||||||||||||    
T  36907676 agtttatgaaaaaacaacttgtgaatatacaattttcgtta 36907636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 2019770 - 2019716
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 187  Q
    |||||||||||||||||| || ||||||||||||||   ||||||||||||||||    
T  2019770 ccgtttggattgacttattttagagcttatgcaaaacatcttatgcaaataaata 2019716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 271
Target Start/End: Original strand, 8752811 - 8752909
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||| |||||  ||||| |||| ||||| || ||  ||||| ||| ||||||||||||||||||| |||||||||| ||| |||  ||||||||    
T  8752811 ttatgcaaagaaataagcttttgtgtattattcgtaggtgtgtcaaagtaatttatgaaaaaacagcttaagaagatacaaattttgtttgtgagaact 8752909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 262
Target Start/End: Original strand, 14262330 - 14262420
Alignment:
Q  172 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    |||||||||||||| |  | || ||||  |||| |||| || || ||||||||||||||||||||| |||||||| |||||||||| ||||    
T  14262330 cttatgcaaataaagaagcattaatgtgttatttataaatttgttaaggtagtttatgaaaaaacaacttatgaatatacaatttttgtta 14262420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 233
Target Start/End: Complemental strand, 32213105 - 32213043
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 233  Q
    |||||||||||||||||  |||||||||| |||||||||| | |||| | |||||||||||||    
T  32213105 gcttatgcaaataaataagcttttatgtattattcataagcttgtcaggttagtttatgaaaa 32213043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 262
Target Start/End: Original strand, 32751143 - 32751232
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg-aaaaaacagcttatgaagatacaattttcgtta 262  Q
    ||||||||||||||| | |||||||||||||| |||||||  | || |||||||||| ||||||||  |||| || |||||||||||||||    
T  32751143 ttatgcaaataaataaatttttatgtactattaataagtt-tttaaagtagtttatgaaaaaaacattttataaaaatacaattttcgtta 32751232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 32975872 - 32975802
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttat 196  Q
    ||||||||||||| ||||| ||| | |||||||||||| ||||  |||||||||||||||||  |||||||    
T  32975872 ttagggcccgtttagattgtcttgtttttgagcttatgaaaaatagcttatgcaaataaataagcttttat 32975802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 218333 - 218246
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    ||||| ||||||||| | ||||||||| |||| |||||||  | ||||||||||||||||||  |  |||||||||||||||||||||||    
T  218333 ttatgtaaataaataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaactat-ttatgaagatacaattttcgtta 218246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 694893 - 694806
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    ||||| ||||||||| | ||||||||| |||| |||||||  | ||||||||||||||||||  |  |||||||||||||||||||||||    
T  694893 ttatgtaaataaataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaactat-ttatgaagatacaattttcgtta 694806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 699102 - 699015
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    ||||| ||||||||| | ||||||||| |||| |||||||  | ||||||||||||||||||  |  |||||||||||||||||||||||    
T  699102 ttatgtaaataaataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaactat-ttatgaagatacaattttcgtta 699015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 731956 - 731869
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    ||||| ||||||||| | ||||||||| |||| |||||||  | ||||||||||||||||||  |  |||||||||||||||||||||||    
T  731956 ttatgtaaataaataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaactat-ttatgaagatacaattttcgtta 731869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 855852 - 855765
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    ||||| ||||||||| | ||||||||| |||| |||||||  | ||||||||||||||||||  |  |||||||||||||||||||||||    
T  855852 ttatgtaaataaataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaactat-ttatgaagatacaattttcgtta 855765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 24350424 - 24350481
Alignment:
Q  130 ggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 187  Q
    |||||||||||| |||||||| |||||||||||| |||   |||||||||||||||||    
T  24350424 ggcccgtttggaatgacttatttttgagcttatgaaaactagcttatgcaaataaata 24350481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 262
Target Start/End: Original strand, 9782210 - 9782277
Alignment:
Q  195 atgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    ||||| |||| ||||| | || || ||||||||| |||||||| |||||||| |||||||||||||||    
T  9782210 atgtattatttataagcttgttaaagtagtttattaaaaaacaacttatgaatatacaattttcgtta 9782277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 10298833 - 10298899
Alignment:
Q  131 gcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    |||||||||||||| ||||| |||||||||||| | ||  ||||||||||||| |||| |||||||||    
T  10298833 gcccgtttggattggcttatttttgagcttatgaataatagcttatgcaaatagatag-cttttatgt 10298899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 13265489 - 13265547
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 231  Q
    |||||||||||||||  |||||||||| |||||||||| | ||||| |||||| |||||    
T  13265489 ttatgcaaataaataagcttttatgtattattcataagcttgtcaaagtagttcatgaa 13265547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 15763270 - 15763212
Alignment:
Q  129 gggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 187  Q
    ||||| |||||||||||||||| |||||| ||||| ||||  |||||||||||| ||||    
T  15763270 gggccggtttggattgacttatttttgagtttatgaaaaatagcttatgcaaattaata 15763212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 196
Target Start/End: Complemental strand, 24087352 - 24087286
Alignment:
Q  130 ggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttat 196  Q
    ||||||||||||||||||||| ||||||   ||| ||||  |||||||||||||||||  |||||||    
T  24087352 ggcccgtttggattgacttatttttgagtgaatgaaaaatagcttatgcaaataaataagcttttat 24087286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 196
Target Start/End: Original strand, 34286473 - 34286535
Alignment:
Q  134 cgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttat 196  Q
    |||||| |||||||||| |||||||||||| ||||  | |||||||||||||||  |||||||    
T  34286473 cgtttgaattgacttatttttgagcttatgaaaaataggttatgcaaataaataagcttttat 34286535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 271
Target Start/End: Original strand, 10213757 - 10213798
Alignment:
Q  230 aaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||||||||||||| |||||||| |||| ||||||||    
T  10213757 aaaaaacagcttatgaagaaacaatttttgttagtgagaact 10213798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 168
Target Start/End: Complemental strand, 11460828 - 11460791
Alignment:
Q  131 gcccgtttggattgacttatctttgagcttatgcaaaa 168  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  11460828 gcccgtttggattgacttatttttgagcttatgaaaaa 11460791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 167
Target Start/End: Original strand, 18396912 - 18396949
Alignment:
Q  130 ggcccgtttggattgacttatctttgagcttatgcaaa 167  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  18396912 ggcccgtttggattggcttatttttgagcttatgcaaa 18396949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 25465886 - 25465830
Alignment:
Q  214 gtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||| ||||||||||||| || ||||||||||||||||||| |||| ||| ||||    
T  25465886 gtcaaggaagtttatgaaaaa-caacttatgaagatacaatttttgttactgaaaact 25465830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 198
Target Start/End: Original strand, 32212923 - 32212988
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    |||||||||||| ||||| |||  ||||||| ||||  |||||||||||||||||  |||||||||    
T  32212923 ccgtttggattggcttatttttttgcttatgaaaaatagcttatgcaaataaataagcttttatgt 32212988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 7638511 - 7638567
Alignment:
Q  156 agcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagtt 212  Q
    ||||||||||||| || ||||||||||||||   |||||||||| |||| |||||||    
T  7638511 agcttatgcaaaactgtttatgcaaataaatcagcttttatgtattattaataagtt 7638567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 10213871 - 10213819
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 187  Q
    ||||||||||  |||| |||||||||||| ||||  |||||||||||||||||    
T  10213871 gtttggattggattatttttgagcttatgaaaaatagcttatgcaaataaata 10213819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 14725047 - 14724948
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    ||||||||||||||| |  ||||||| || |||| ||||| | || || ||| |||||||||||||| |||||| || || ||||||||||| | |||||    
T  14725047 gcttatgcaaataaagat-cttttatatattatttataagattgttaatgtaatttatgaaaaaacaacttatgtaggtataattttcgttaataagaac 14724949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 24866858 - 24866913
Alignment:
Q  132 cccgtttggattga-cttatctttgagcttatgcaaaaatgcttatgcaaataaata 187  Q
    |||||||||||||| ||||| |||||||||||| ||||  |||||||||||||||||    
T  24866858 cccgtttggattgagcttat-tttgagcttatgaaaaagagcttatgcaaataaata 24866913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 29243146 - 29243083
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa 235  Q
    |||||||||||||||||  |||||||||| |||| |||||||  | |||||||||||| ||||||    
T  29243146 gcttatgcaaataaataagcttttatgtattatttataagtt-tttaaggtagtttattaaaaaa 29243083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 35055468 - 35055522
Alignment:
Q  217 aaggtagtttatgaaaaaacagc---ttatgaagatacaattttcgttattgaga 268  Q
    ||||||||||||||||||| | |   ||||||||||||||||||||||| |||||    
T  35055468 aaggtagtttatgaaaaaaaaaccatttatgaagatacaattttcgttagtgaga 35055522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 2e-35; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 140 - 271
Target Start/End: Complemental strand, 40581191 - 40581059
Alignment:
Q  140 gattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa-aaaacag 238  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||  |||||||||| |||| ||||| | |||||||||||||||||| |||||||    
T  40581191 gattgacttatctttgagcttatgcaaaacaacttatgcaaataaataagcttttatgtattattaataagcttgtcaaggtagtttatgaaaaaaacag 40581092  T
Q  239 cttatgaagatacaattttcgttattgagaact 271  Q
    | |||||||| ||||||||||||| ||||||||    
T  40581091 cgtatgaagaaacaattttcgttagtgagaact 40581059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 136 - 271
Target Start/End: Complemental strand, 53218158 - 53218023
Alignment:
Q  136 tttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa 235  Q
    ||||||||||||||| ||| |||||||||||||   ||||||| ||||||||   ||||||||| |||||||||| | ||||||||||||||||||||||    
T  53218158 tttggattgacttattttttagcttatgcaaaacaacttatgcgaataaataagattttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 53218059  T
Q  236 cagcttatgaagatacaattttcgttattgagaact 271  Q
    || ||| |||||||||||||||||||| ||||||||    
T  53218058 caacttttgaagatacaattttcgttagtgagaact 53218023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 129 - 262
Target Start/End: Complemental strand, 22809319 - 22809185
Alignment:
Q  129 gggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagactttt-atgtactattcataagttggtcaaggtagttta 227  Q
    ||||| ||||| |||||||||| |||||| ||||||||||  |||||||||||||||||  ||||| || || |||||||||| | ||||||||||||||    
T  22809319 gggcctgtttgaattgacttatttttgaggttatgcaaaacagcttatgcaaataaataagctttttatatattattcataagcttgtcaaggtagttta 22809220  T
Q  228 tgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    ||||||||| |||||||||||||||||||||||||    
T  22809219 tgaaaaaactgcttatgaagatacaattttcgtta 22809185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 129 - 269
Target Start/End: Original strand, 29270322 - 29270462
Alignment:
Q  129 gggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttat 228  Q
    ||||| |||||||||||||||| |||||||||||||||||   |||||   ||||||||  |||||||||| |||||||||| |  ||||| || |||||    
T  29270322 gggcctgtttggattgacttatttttgagcttatgcaaaacaacttataggaataaataagcttttatgtattattcataagcttttcaagataatttat 29270421  T
Q  229 gaaaaaacagcttatgaagatacaattttcgttattgagaa 269  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  29270422 gaaaaaacagcttatgaagatacaattttcgttaatgagaa 29270462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 43080017 - 43079917
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    |||||||||||||||||  |||||||||  |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  43080017 gcttatgcaaataaataagcttttatgtgttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtgattgagaac 43079918  T
Q  271 t 271  Q
    |    
T  43079917 t 43079917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 130 - 271
Target Start/End: Complemental strand, 34707837 - 34707696
Alignment:
Q  130 ggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg 229  Q
    |||| |||||||||||||||| |||||||||||||||||   |||| | ||||| |||  |||||||||| |||||||||| | || |||||||||||||    
T  34707837 ggcctgtttggattgacttatttttgagcttatgcaaaacaacttacgtaaatatataagcttttatgtattattcataagcttgttaaggtagtttatg 34707738  T
Q  230 aaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||||| | |||||||||||||||||||  |||||||    
T  34707737 aaaaaacagctaacgaagatacaattttcgttagcgagaact 34707696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 52021249 - 52021350
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg-aaaaaacagcttatgaagatacaattttcgttattgagaa 269  Q
    |||||||||||||||||  |||||||||| |||||||||| | |||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||    
T  52021249 gcttatgcaaataaatatgcttttatgtattattcataagattgtcaaggtagtttatgaaaaaaacagcttatgaagatataattttcgttagtgagaa 52021348  T
Q  270 ct 271  Q
    ||    
T  52021349 ct 52021350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 134 - 261
Target Start/End: Original strand, 10272088 - 10272213
Alignment:
Q  134 cgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 233  Q
    ||||||||||||||||| ||| |||||||||||||   || ||||||||||||| ||||||||||| |||||||||| |  |||||| ||||| ||||||    
T  10272088 cgtttggattgacttattttttagcttatgcaaaacaactcatgcaaataaataaacttttatgtattattcataagct--tcaaggcagtttctgaaaa 10272185  T
Q  234 aacagcttatgaagatacaattttcgtt 261  Q
    |||||||||||| ||||||| |||||||    
T  10272186 aacagcttatgaggatacaaatttcgtt 10272213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 152 - 256
Target Start/End: Original strand, 51409377 - 51409481
Alignment:
Q  152 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 251  Q
    |||||||||||| ||||  |||||||||||||||||  ||||||| || ||||||| |||| |||||||||||||||||||||||| ||||||||||||     
T  51409377 tttgagcttatggaaaatagcttatgcaaataaataatcttttatttattattcatgagtttgtcaaggtagtttatgaaaaaacaacttatgaagataa 51409476  T
Q  252 aattt 256  Q
    |||||    
T  51409477 aattt 51409481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 126 - 268
Target Start/End: Original strand, 29614152 - 29614293
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 225  Q
    ||||||| |||||||||| |||||| || ||||||||  ||||  ||||||| |||||||||   ||||||||| |||| |||| ||  | |||||||||    
T  29614152 ttagggctcgtttggattaacttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataatttttt-aaggtagtt 29614250  T
Q  226 tatgaaaaaacagcttatgaagatacaattttcgttattgaga 268  Q
    ||||||||||||| ||||||||||||||||||||||| |||||    
T  29614251 tatgaaaaaacagtttatgaagatacaattttcgttagtgaga 29614293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 133 - 262
Target Start/End: Original strand, 584985 - 585114
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 232  Q
    |||||||||||||||||| ||| |||||||| ||||    |||||||||||||||  |||||||| | |||||| ||| |  |  |||||||||||||||    
T  584985 ccgtttggattgacttatttttcagcttatgtaaaacacattatgcaaataaataagcttttatgcattattcaaaagcttcttgaggtagtttatgaaa 585084  T
Q  233 aaacagcttatgaagatacaattttcgtta 262  Q
    ||||| ||||||||||||||||||||||||    
T  585085 aaacaacttatgaagatacaattttcgtta 585114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 171 - 268
Target Start/End: Complemental strand, 40240660 - 40240563
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgaga 268  Q
    ||||||||||||||| |  |||||||||| ||||||||||   ||| |||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  40240660 gcttatgcaaataaagaagcttttatgtattattcataagcgtgtctaggtagtttatgaaaaaacaacttatgaagatacaattttcgttagtgaga 40240563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 134 - 255
Target Start/End: Complemental strand, 2086811 - 2086690
Alignment:
Q  134 cgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 233  Q
    ||||||||||| ||||| || |||||||||| |||  ||||||| ||||||||| ||||||||||| |||| ||||  | || ||||| |||||||||||    
T  2086811 cgtttggattggcttattttagagcttatgctaaacagcttatgtaaataaataaacttttatgtattatttataatcttgtaaaggtggtttatgaaaa 2086712  T
Q  234 aacagcttatgaagatacaatt 255  Q
    || || ||||||||||||||||    
T  2086711 aatagtttatgaagatacaatt 2086690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 174 - 271
Target Start/End: Complemental strand, 48597947 - 48597850
Alignment:
Q  174 tatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||| ||| ||||||||  | |||||||||||| ||| ||||||| |||||||||||| |||||||||||||||||||||| | ||||||||    
T  48597947 tatgcaaatacataaacttttataaattattcataagtttgtcgaggtagtgtatgaaaaaacaacttatgaagatacaattttcgtcagtgagaact 48597850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 135 - 271
Target Start/End: Complemental strand, 28741333 - 28741197
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 234  Q
    |||||||||  ||||| || ||| | ||||||||  |||||||||||||||||  | |||||||| || | ||||| | || || |||||||||||||||    
T  28741333 gtttggattagcttattttagagttcatgcaaaacagcttatgcaaataaatattcctttatgtattacttataagcttgttaaagtagtttatgaaaaa 28741234  T
Q  235 acagcttatgaagatacaattttcgttattgagaact 271  Q
    |||| |||||||| |||||||||||||| ||||||||    
T  28741233 acagattatgaaggtacaattttcgttagtgagaact 28741197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 52421224 - 52421124
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    ||||| |||||||||||  |||||||||| |||||||||| | |||||||||||||||||||||| || | |||||||||||||||| ||||  ||||||    
T  52421224 gcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatttttgttagcgagaac 52421125  T
Q  271 t 271  Q
    |    
T  52421124 t 52421124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 126 - 268
Target Start/End: Original strand, 3645261 - 3645402
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 225  Q
    ||||||| ||||||||||  ||||| || ||||||||  ||||  ||||||| |||||||||   ||||||||| |||| |||| ||  | |||||||||    
T  3645261 ttagggctcgtttggattagcttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataatttttt-aaggtagtt 3645359  T
Q  226 tatgaaaaaacagcttatgaagatacaattttcgttattgaga 268  Q
    ||||||||||||| | ||||||||||||||||||||| |||||    
T  3645360 tatgaaaaaacagttcatgaagatacaattttcgttagtgaga 3645402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 175 - 271
Target Start/End: Complemental strand, 42956258 - 42956162
Alignment:
Q  175 atgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||||||   ||||||||| |||||||||  | ||| | ||||||||||| |||||||||||| |||||||||||||||||| ||||||||    
T  42956258 atgcaaataaataagtttttatgtattattcataaacttgtcgaagtagtttatgataaaacagcttataaagatacaattttcgttagtgagaact 42956162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 135 - 258
Target Start/End: Original strand, 10448741 - 10448864
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 234  Q
    |||||||||  ||||| || ||||||||||||||   ||||||||||||||||  | |||||||| |||| ||||| | || || |||||||||||||||    
T  10448741 gtttggattagcttattttagagcttatgcaaaacaacttatgcaaataaatatgcctttatgtattatttataagcttgttaatgtagtttatgaaaaa 10448840  T
Q  235 acagcttatgaagatacaattttc 258  Q
    |||| |||||||| || |||||||    
T  10448841 acagtttatgaaggtataattttc 10448864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 127 - 271
Target Start/End: Complemental strand, 33946669 - 33946533
Alignment:
Q  127 tagggcccgtttggattga-cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 225  Q
    ||||||||||||||||||| ||||| |||||||||||||||||  |||||||||||||||||  ||||||| || ||||    ||||    |||||| ||    
T  33946669 tagggcccgtttggattgagcttat-tttgagcttatgcaaaatagcttatgcaaataaataagcttttatttattatt----agtt----aaggtaatt 33946579  T
Q  226 tatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||| || |||||| ||||| ||||||||||| ||||||||    
T  33946578 tatgaaaaaccaacttatgtagataaaattttcgttaatgagaact 33946533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 130 - 271
Target Start/End: Complemental strand, 1516221 - 1516081
Alignment:
Q  130 ggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg 229  Q
    ||||| ||| |||| |||||| || |||||||| |||||   ||||| |||||||||| || |||||||| |||| ||||||| || |||||| ||||||    
T  1516221 ggcccatttagattaacttattttagagcttatacaaaataacttattcaaataaata-acatttatgtattatttataagtttgttaaggtattttatg 1516123  T
Q  230 aaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
     |||| ||| |||| |||||||||||||| ||| ||||||||    
T  1516122 gaaaatcagtttataaagatacaattttcattagtgagaact 1516081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 135 - 252
Target Start/End: Original strand, 3845822 - 3845939
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 234  Q
    |||| ||||| ||||| ||||||||||||||| |  | |||  ||||||||||  ||||||| || |||||||||| | |||||| |||||||||| |||    
T  3845822 gtttagattggcttatatttgagcttatgcaacacagattacacaaataaataagcttttatatattattcataagcttgtcaagctagtttatgacaaa 3845921  T
Q  235 acagcttatgaagataca 252  Q
    ||||| ||||||||||||    
T  3845922 acagcatatgaagataca 3845939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 135 - 240
Target Start/End: Original strand, 21296733 - 21296838
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 234  Q
    |||||||||||||||| |||||| ||||||||||    |||||||||||||||   |||||| || |||||||| |||  ||||||||||||||||||||    
T  21296733 gtttggattgacttatttttgagattatgcaaaacaatttatgcaaataaataagtttttatctattattcatacgtttatcaaggtagtttatgaaaaa 21296832  T
Q  235 acagct 240  Q
    | ||||    
T  21296833 atagct 21296838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 3870309 - 3870209
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    ||||||||||| |||||  |||||||||  | |||||||| | |||||||||||||||||||||||| | ||||| |||||| ||||| ||| |||||||    
T  3870309 gcttatgcaaaaaaataagcttttatgttttgttcataagcttgtcaaggtagtttatgaaaaaacaacatatgatgatacacttttcattaatgagaac 3870210  T
Q  271 t 271  Q
    |    
T  3870209 t 3870209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 45331378 - 45331290
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcg 259  Q
    ||||||| |||||||||  |||||||||| ||| |||||| | || |||  |||||||||||||||| |||||||||||||||||||||    
T  45331378 gcttatgtaaataaataaccttttatgtattatgcataagcttgttaagacagtttatgaaaaaacatcttatgaagatacaattttcg 45331290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 250
Target Start/End: Original strand, 7292649 - 7292762
Alignment:
Q  136 tttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa 235  Q
    ||||||||||||||| ||||| |||||| |||    |||||||||||| |||  || ||||||| |||||||||||| |||||  |||||||||||||||    
T  7292649 tttggattgacttat-tttgaacttatgtaaagcaacttatgcaaatacataagctcttatgtattattcataagtttgtcaatatagtttatgaaaaaa 7292747  T
Q  236 cagcttatgaagata 250  Q
    ||| |||||| ||||    
T  7292748 cagtttatgatgata 7292762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 126 - 268
Target Start/End: Original strand, 20894461 - 20894602
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 225  Q
    |||||| |||||||||||  ||||| || ||||||||  ||||  ||||||| |||||||||   ||||||||| |||| |||| ||  | || ||||||    
T  20894461 ttagggtccgtttggattagcttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataatttttt-aatgtagtt 20894559  T
Q  226 tatgaaaaaacagcttatgaagatacaattttcgttattgaga 268  Q
    | ||||||||||| | ||||||||||||||||||||| |||||    
T  20894560 tttgaaaaaacagttcatgaagatacaattttcgttagtgaga 20894602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 23816224 - 23816154
Alignment:
Q  201 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||||||| ||| || | ||||||||    
T  23816224 tattcataagctattcaaggtagtttatgaaaaaacagcttatgaagatacaactttggtcagtgagaact 23816154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 172 - 257
Target Start/End: Complemental strand, 24842189 - 24842104
Alignment:
Q  172 cttatgcaaataaatagacttttatgtactattcataagttggtc-aaggtagtttatgaaaaaacagcttatgaagatacaatttt 257  Q
    |||||||||||||||| | ||||||||| |||||||||||| ||| || ||| |||||| ||||||| |||||||||||||||||||    
T  24842189 cttatgcaaataaataaatttttatgtattattcataagtttgtcaaatgtaatttatg-aaaaacaacttatgaagatacaatttt 24842104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 254
Target Start/End: Original strand, 4974268 - 4974397
Alignment:
Q  125 tttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 224  Q
    ||||||| |||||||||||| ||||| || |||||||||||||   |||||||||||||||||  |  | ||||| |||| ||||  | |  ||||||||    
T  4974268 tttagggtccgtttggattggcttattttagagcttatgcaaagcagcttatgcaaataaataagcactaatgtattatttataaacttgctaaggtagt 4974367  T
Q  225 ttatgaaaaaacagcttatgaagatacaat 254  Q
    |||||||||||||  ||||||| |||||||    
T  4974368 ttatgaaaaaacaagttatgaatatacaat 4974397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 126 - 258
Target Start/End: Original strand, 30383726 - 30383858
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 225  Q
    |||||| | ||||||||||||| || || ||||||||||||||  | |||||| |||||| |  | || ||||  |||| |||| || || |||||||||    
T  30383726 ttagggtcggtttggattgactaattttagagcttatgcaaaatagtttatgcgaataaagaagcattaatgtgttatttataaatttgttaaggtagtt 30383825  T
Q  226 tatgaaaaaacagcttatgaagatacaattttc 258  Q
    |||||||||||| | |||||| |||||||||||    
T  30383826 tatgaaaaaacaacctatgaatatacaattttc 30383858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 268
Target Start/End: Complemental strand, 4257383 - 4257286
Alignment:
Q  172 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa--cagcttatgaagatacaattttcgttattgaga 268  Q
    ||||||||||||||||   ||||||||| |||| |||||||  | |||||||||||||||||||  ||| |||||||||||||||||||| || |||||    
T  4257383 cttatgcaaataaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaaaacagtttatgaagatacaattttcgctagtgaga 4257286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 271
Target Start/End: Complemental strand, 32901230 - 32901131
Alignment:
Q  172 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||| |||||||||  ||||||| || |||||| || || || ||| |||||||| | |||||| |||||||||||| ||||||||||| ||||||||    
T  32901230 cttatgtaaataaataagcttttatttattattcacaaatttgttaagatagtttataagaaaacaacttatgaagataaaattttcgttagtgagaact 32901131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 40240482 - 40240548
Alignment:
Q  129 gggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttat 196  Q
    |||||||||||||||||||||| |||||||||||| ||||  |||||||||||||||||  |||||||    
T  40240482 gggcccgtttggattgacttat-tttgagcttatgaaaaatagcttatgcaaataaataagcttttat 40240548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 7300410 - 7300466
Alignment:
Q  215 tcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||| |||||||||||||| || ||||| |||||||||||||||||| ||||||||    
T  7300410 tcaagatagtttatgaaaaatcaacttataaagatacaattttcgttagtgagaact 7300466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 205
Target Start/End: Original strand, 23555441 - 23555521
Alignment:
Q  125 tttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattc 205  Q
    ||||||| |||||||||||| ||||| ||||||||||| | |||  | |||||||||||||||  |||||||||| |||||    
T  23555441 tttagggtccgtttggattggcttatttttgagcttatacgaaacagtttatgcaaataaataagcttttatgtattattc 23555521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 30473223 - 30473151
Alignment:
Q  174 tatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaa 246  Q
    |||||||||||||| || || ||||| |||| ||||| | || ||||||||||||||||||||| ||||||||    
T  30473223 tatgcaaataaataaacattaatgtattatttataaggttgttaaggtagtttatgaaaaaacaacttatgaa 30473151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 43069079 - 43069131
Alignment:
Q  201 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaa 253  Q
    |||||||||||| |||||| |||||||||| |||||||||||||| |||||||    
T  43069079 tattcataagtttgtcaagatagtttatgagaaaacagcttatgaggatacaa 43069131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 271
Target Start/End: Complemental strand, 43971922 - 43971830
Alignment:
Q  179 aaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||  ||||||| || |||||| ||||| || ||  |||||||||| ||||||  ||||||||||| ||||||||||| ||||||||    
T  43971922 aaataaataagcttttatttattattcacaagtttgttaaaatagtttatgagaaaacaatttatgaagataaaattttcgttagtgagaact 43971830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 176 - 271
Target Start/End: Original strand, 10521162 - 10521257
Alignment:
Q  176 tgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||||||  ||| |||||| |||||||||| | ||||| ||||||||||||| ||||  ||||||||||| || ||| |||| ||| ||||    
T  10521162 tgcaaataaataagcttatatgtattattcataagcttgtcaatgtagtttatgaaacaacattttatgaagatataacttttgttagtgaaaact 10521257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 172 - 271
Target Start/End: Original strand, 10667402 - 10667501
Alignment:
Q  172 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||| |||||||||||  ||| |||||| |||||||||| | ||||| ||||||||||||| ||||  ||||||||||| || ||| |||| ||| ||||    
T  10667402 cttacgcaaataaataagcttatatgtattattcataagcttgtcaatgtagtttatgaaacaacattttatgaagatataacttttgttagtgaaaact 10667501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 20685837 - 20685888
Alignment:
Q  220 gtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||| |||||||| |||||||||||||||||||| ||| ||||||||    
T  20685837 gtagtttatcaaaaaacaacttatgaagatacaattttcattagtgagaact 20685888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 134 - 233
Target Start/End: Original strand, 36266210 - 36266309
Alignment:
Q  134 cgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 233  Q
    ||||||||||  ||||| || ||||||||  ||||  | ||||||||||||||| ||||||||||| |||| ||||||| || |||||| |||| |||||    
T  36266210 cgtttggattagcttattttagagcttatataaaacagtttatgcaaataaataaacttttatgtattatttataagtttgttaaggtattttacgaaaa 36266309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 242019 - 242081
Alignment:
Q  137 ttggattgacttatctttgagcttatgcaaaaat-gcttatgcaaataaatagacttttatgt 198  Q
    |||||||||||| | ||||| |||||| |||||| ||||||||||||||||| ||||||||||    
T  242019 ttggattgacttgtttttgatcttatgtaaaaatagcttatgcaaataaataaacttttatgt 242081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 3876364 - 3876270
Alignment:
Q  153 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaag 247  Q
    |||||||||| |||||  ||||||| ||||||||   ||||||| || |||||||||  | || ||||||||||||||||||||| |||| ||||    
T  3876364 ttgagcttatacaaaacagcttatgtaaataaattagcttttatttattattcataatctagttaaggtagtttatgaaaaaacaacttaagaag 3876270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 271
Target Start/End: Original strand, 37778182 - 37778236
Alignment:
Q  217 aaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||||||||||||  | |||||||||||||||||| |||| ||||||||    
T  37778182 aaggtagtttatgaaaaaatcggttatgaagatacaatttttgttagtgagaact 37778236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 257
Target Start/End: Original strand, 11528875 - 11528980
Alignment:
Q  152 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 251  Q
    ||||| |||||||||||   |||||| || ||||||  |||||||||| ||||||||| || || || ||||||||||| |||| |  |||||||||||     
T  11528875 tttgaacttatgcaaaacaacttatgtaagtaaataagcttttatgtattattcataaatttgttaatgtagtttatgataaaaaaaattatgaagatat 11528974  T
Q  252 aatttt 257  Q
    ||||||    
T  11528975 aatttt 11528980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 221 - 262
Target Start/End: Complemental strand, 20174973 - 20174932
Alignment:
Q  221 tagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    ||||||||||||||||| |||||||| |||||||||||||||    
T  20174973 tagtttatgaaaaaacaacttatgaatatacaattttcgtta 20174932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 29830680 - 29830622
Alignment:
Q  217 aaggtagtttatgaa----aaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||||||||    ||||||| ||||||||||||||||||||||| ||||||||    
T  29830680 aaggtagtttatgaaaaaaaaaacagtttatgaagatacaattttcgttagtgagaact 29830622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 52895309 - 52895378
Alignment:
Q  129 gggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    ||||||||||||||| | |||| |||||||||||| |||| || ||| |||||||||||  |||||||||    
T  52895309 gggcccgtttggatttatttatttttgagcttatgaaaaattgtttaggcaaataaataagcttttatgt 52895378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 19307979 - 19308035
Alignment:
Q  206 ataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    ||||||| || ||||||||||||||||||||| | |||||| |||||||||| ||||    
T  19307979 ataagtttgttaaggtagtttatgaaaaaacaacctatgaatatacaatttttgtta 19308035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 20685961 - 20685909
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 187  Q
    |||||||||||||||| ||| |||||||| |||| ||||||| ||||||||||    
T  20685961 gtttggattgacttattttttagcttatgaaaaattgcttatccaaataaata 20685909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 30499934 - 30500010
Alignment:
Q  136 tttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagtt 212  Q
    |||||||| |||||| || |||||||| |||||  | ||||||||||||||| | ||||||||| |||| |||||||    
T  30499934 tttggattaacttattttagagcttatacaaaacagtttatgcaaataaataaatttttatgtattatttataagtt 30500010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 35480303 - 35480362
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaat 186  Q
    |||||||| |||||||||||||||| |||||||||||| ||||   |||||||||||||||    
T  35480303 ttagggcctgtttggattgacttatttttgagcttatg-aaaataacttatgcaaataaat 35480362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 43079836 - 43079896
Alignment:
Q  127 tagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 187  Q
    |||||||||||||||||||||||| |  ||||||||| ||||  |||||| ||||||||||    
T  43079836 tagggcccgtttggattgacttatttacgagcttatgaaaaatagcttattcaaataaata 43079896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 215 - 245
Target Start/End: Complemental strand, 50022007 - 50021977
Alignment:
Q  215 tcaaggtagtttatgaaaaaacagcttatga 245  Q
    |||||||||||||||||||||||||||||||    
T  50022007 tcaaggtagtttatgaaaaaacagcttatga 50021977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 271
Target Start/End: Complemental strand, 53787785 - 53787735
Alignment:
Q  221 tagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||| |||||||||| |||| |||||| |||||| |||||||||||||    
T  53787785 tagtttacgaaaaaacagtttataaagatataatttttgttattgagaact 53787735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 262
Target Start/End: Complemental strand, 20365488 - 20365427
Alignment:
Q  201 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    |||||||||| | ||||| ||| ||||||||||| ||| ||||||||||| |||||| ||||    
T  20365488 tattcataagcttgtcaaagtactttatgaaaaagcagtttatgaagatataatttttgtta 20365427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 271
Target Start/End: Complemental strand, 29830782 - 29830741
Alignment:
Q  230 aaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||| |||||||||||||||||| |||| ||||||||    
T  29830782 aaaaaacagtttatgaagatacaatttttgttactgagaact 29830741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 261
Target Start/End: Complemental strand, 47403888 - 47403755
Alignment:
Q  127 tagggcccgtttggatt-gacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 225  Q
    ||||||||||||||||| |  |||| |||||||||||| ||||  |  ||| ||||||||||   ||||| ||| ||||||||| || || || ||||||    
T  47403888 tagggcccgtttggattaggtttat-tttgagcttatgaaaaagag--tatacaaataaataagtttttaggtattattcataaatttgtaaatgtagtt 47403792  T
Q  226 tatg-aaaaaacagcttatgaagatacaattttcgtt 261  Q
    |||| |||||| |  ||||||||||||||||||||||    
T  47403791 tatgcaaaaaataatttatgaagatacaattttcgtt 47403755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 53261871 - 53261814
Alignment:
Q  130 ggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 187  Q
    ||||| ||||||||| ||||| |||||||||||| | ||  |||||||||||||||||    
T  53261871 ggcccatttggattggcttatttttgagcttatggacaacagcttatgcaaataaata 53261814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 130 - 166
Target Start/End: Complemental strand, 15444092 - 15444056
Alignment:
Q  130 ggcccgtttggattgacttatctttgagcttatgcaa 166  Q
    |||||| |||||||||||||| |||||||||||||||    
T  15444092 ggcccgattggattgacttatttttgagcttatgcaa 15444056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 17752162 - 17752114
Alignment:
Q  223 gtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||| | ||| ||||||||||||||||||||||| | ||||||    
T  17752162 gtttatgaaagatcagtttatgaagatacaattttcgttagtaagaact 17752114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 19053482 - 19053434
Alignment:
Q  223 gtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||| | ||| ||||||||||||||||||||||| | ||||||    
T  19053482 gtttatgaaagatcagtttatgaagatacaattttcgttagtaagaact 19053434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 135 - 231
Target Start/End: Complemental strand, 29830889 - 29830793
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 231  Q
    |||||||||  ||||| || |||||||| |||||  | |||||||||||||||   ||||||||| |||  ||| ||| || |||||||||||||||    
T  29830889 gtttggattatcttattttagagcttatacaaaacagtttatgcaaataaataagtttttatgtattatctatatgtttgttaaggtagtttatgaa 29830793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 38631056 - 38631095
Alignment:
Q  231 aaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||||||||| |||||||||| |||||||||||||    
T  38631056 aaaaacagcttatgaa-atacaattttggttattgagaact 38631095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 48816764 - 48816808
Alignment:
Q  217 aaggtagtttatgaaaaaacagcttatgaagatacaattttcgtt 261  Q
    ||||||||||| ||| ||||| |||||||| ||||||||||||||    
T  48816764 aaggtagtttaagaataaacaacttatgaatatacaattttcgtt 48816808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 127 - 167
Target Start/End: Original strand, 50540514 - 50540554
Alignment:
Q  127 tagggcccgtttggattgacttatctttgagcttatgcaaa 167  Q
    |||||||| ||||||||| ||||| ||||||||||||||||    
T  50540514 tagggcccctttggattgtcttatttttgagcttatgcaaa 50540554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 53261678 - 53261738
Alignment:
Q  136 tttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttat 196  Q
    ||||||||||||||  |||||||||||| ||||  |||||||||| ||||||  |||||||    
T  53261678 tttggattgacttagttttgagcttatgaaaaatagcttatgcaattaaataagcttttat 53261738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 2e-32; HSPs: 99)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 171 - 270
Target Start/End: Original strand, 28625483 - 28625582
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    |||||||||||||||||  |||||| ||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  28625483 gcttatgcaaataaataagcttttaagtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtgagaac 28625582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 130 - 271
Target Start/End: Original strand, 42851984 - 42852124
Alignment:
Q  130 ggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg 229  Q
    |||||||| |||||| ||||| |||| ||||||||||||  |||||| ||||||||||  |||||||||| |||||||||| | |||||| |||||||||    
T  42851984 ggcccgttcggattggcttatttttgggcttatgcaaaacagcttattcaaataaataagcttttatgtattattcataagcttgtcaagatagtttatg 42852083  T
Q  230 aaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||| ||||| || ||||||||||||||| ||||||||    
T  42852084 aaaaaacaacttat-aaaatacaattttcgttagtgagaact 42852124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 128 - 271
Target Start/End: Complemental strand, 13060728 - 13060585
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 227  Q
    |||||| |||||||||| ||||| | |||  ||||| ||||   ||||||||||||||||  |||||||||| | |||||||| | ||||||||||||||    
T  13060728 agggcctgtttggattggcttatttctgatattatgtaaaagaacttatgcaaataaataagcttttatgtattgttcataagcttgtcaaggtagttta 13060629  T
Q  228 tgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||||||||||||| ||| |||||||||| ||||||||    
T  13060628 tgaaaaaacagcttatgaagttaccattttcgttagtgagaact 13060585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 135 - 271
Target Start/End: Original strand, 12467231 - 12467368
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg-aaaa 233  Q
    ||||||||| | |||| |||||| |||| ||||||   |||||||||||||||  |||||||||| |||||||||| | |||||||||||||||| ||||    
T  12467231 gtttggattaaattatttttgagtttattcaaaaaatgttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 12467330  T
Q  234 aacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||||||||| |||||||| |||| ||||||||    
T  12467331 aacagcttatgaagagacaatttttgttagtgagaact 12467368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 14243792 - 14243913
Alignment:
Q  137 ttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttat-gaaaaaa 235  Q
    |||||||||||||| |||||| ||||||||||  ||||||| |||||||||  ||| |||||| ||||||||||||| | |||||||||||| |||||||    
T  14243792 ttggattgacttatttttgagattatgcaaaacagcttatgtaaataaataagcttctatgtaatattcataagttgtttaaggtagtttatggaaaaaa 14243891  T
Q  236 cagcttatgaagatacaatttt 257  Q
    ||||||||||| ||||||||||    
T  14243892 cagcttatgaaaatacaatttt 14243913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 173 - 261
Target Start/End: Original strand, 41534628 - 41534716
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtt 261  Q
    |||||||||||||||  |||||||||| |||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||    
T  41534628 ttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttacgaaaaaacagcttatgaagatacaattttcgtt 41534716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 133 - 271
Target Start/End: Original strand, 1576596 - 1576733
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 232  Q
    |||||||||||| |||||  ||| ||||||||||||  ||||| ||||||||||| ||||||||||| | |||||||| | ||||| |||||||||| ||    
T  1576596 ccgtttggattggcttattcttgggcttatgcaaaacagcttaagcaaataaataaacttttatgtatt-ttcataagcttgtcaatgtagtttatggaa 1576694  T
Q  233 aaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||| ||| ||||||||||||||| |||| ||||||||    
T  1576695 aaacaacttgtgaagatacaatttttgttagtgagaact 1576733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 133 - 271
Target Start/End: Complemental strand, 1608219 - 1608082
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 232  Q
    |||||||||||| |||||  ||| ||||||||||||  ||||| ||||||||||| ||||||||||| | |||||||| | ||||| |||||||||| ||    
T  1608219 ccgtttggattggcttattcttgggcttatgcaaaacagcttaagcaaataaataaacttttatgtatt-ttcataagcttgtcaatgtagtttatggaa 1608121  T
Q  233 aaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||| ||| ||||||||||||||| |||| ||||||||    
T  1608120 aaacaacttgtgaagatacaatttttgttagtgagaact 1608082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 129 - 257
Target Start/End: Original strand, 1473317 - 1473445
Alignment:
Q  129 gggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttat 228  Q
    |||||| ||||||||  ||| | ||||||||||| || ||   ||||||||||||||||  |||||||||| |||||||||| | |||||| || |||||    
T  1473317 gggcccttttggatttgcttctttttgagcttatacagaacaacttatgcaaataaataagcttttatgtattattcataagcttgtcaagttaatttat 1473416  T
Q  229 gaaaaaacagcttatgaagatacaatttt 257  Q
    |||||||||||||||||||||||||||||    
T  1473417 gaaaaaacagcttatgaagatacaatttt 1473445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 135 - 271
Target Start/End: Original strand, 24030182 - 24030317
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 234  Q
    ||||||| |||||||| ||| ||||||| |||||  |||||| ||||||||||  |||||||||| |||||||||| | ||||| |||||||||||||||    
T  24030182 gtttggaatgacttatttttaagcttatacaaaacagcttatccaaataaataagcttttatgtattattcataagcttgtcaaagtagtttatgaaaaa 24030281  T
Q  235 acagcttatgaagatacaattttcgttattgagaact 271  Q
    ||| |||  || |||||||||||||||| ||||||||    
T  24030282 aca-cttgcgaggatacaattttcgttagtgagaact 24030317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 128 - 271
Target Start/End: Complemental strand, 12987140 - 12986997
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 227  Q
    |||||| |||||||||| ||||| | |||  ||||| ||||   ||||||||||||||||  |||||||||| | |||||||| | ||||||||||||||    
T  12987140 agggcctgtttggattggcttatttctgatattatgtaaaagaacttatgcaaataaataagcttttatgtattgttcataagcttgtcaaggtagttta 12987041  T
Q  228 tgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||||| |||||||| ||| ||||| |||| ||||||||    
T  12987040 tgaaaaaacagtttatgaagttaccatttttgttagtgagaact 12986997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 22202044 - 22201924
Alignment:
Q  146 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttat----gaaaaaacagctt 241  Q
    ||||| |||||||||||||||||  ||||||| |||||||||  |||||||||| |||||||||| | |||||||||||||||    ||||||| |||||    
T  22202044 cttatttttgagcttatgcaaaacagcttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaggaaaaaaaagctt 22201945  T
Q  242 atgaagatacaattttcgtta 262  Q
     ||||||||||||||||||||    
T  22201944 gtgaagatacaattttcgtta 22201924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 147 - 257
Target Start/End: Complemental strand, 29922296 - 29922186
Alignment:
Q  147 ttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaa 246  Q
    |||| |||||||||||||||||  | |||||||||||||||   ||||||||| |||||||||| | |||||||||||||||||||| |||||||||| |    
T  29922296 ttatttttgagcttatgcaaaacagtttatgcaaataaataagtttttatgtattattcataagcttgtcaaggtagtttatgaaaacacagcttatgca 29922197  T
Q  247 gatacaatttt 257  Q
     ||||||||||    
T  29922196 tatacaatttt 29922186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 41419534 - 41419604
Alignment:
Q  201 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41419534 tattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtgagaact 41419604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 1868853 - 1868948
Alignment:
Q  175 atgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    |||| ||||||||  |||||||||| |||||| ||| | ||||||||||||||||||||| || |||||||||||||||||||||||| |||||||    
T  1868853 atgctaataaataagcttttatgtattattcacaagcttgtcaaggtagtttatgaaaaatcaacttatgaagatacaattttcgttagtgagaac 1868948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 15413959 - 15414086
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 234  Q
    |||||||||||||||| || ||||||||||||||  |||||||||||||||||    || ||||| |||| ||||||| || |||||||||||  |||||    
T  15413959 gtttggattgacttattttagagcttatgcaaaacagcttatgcaaataaataagtattaatgtattattgataagtttgttaaggtagtttactaaaaa 15414058  T
Q  235 acagcttatgaagatacaattttcgtta 262  Q
    ||| |||||||| |||||||||| ||||    
T  15414059 acaacttatgaatatacaatttttgtta 15414086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 172 - 271
Target Start/End: Original strand, 17657246 - 17657345
Alignment:
Q  172 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||||||||||  |||||||||| |||||||||| | | ||  |||||||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  17657246 cttatgcaaataaataagcttttatgtattattcataagcttgccattgtagtttatgaaaaaacatcttatgaagatacgattttcgttagtgagaact 17657345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 135 - 268
Target Start/End: Complemental strand, 1372112 - 1371980
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 234  Q
    |||||||||||||||| |||||||||||||||||  | ||||| ||||||||| ||||||||||| |||| ||||| | || || || |||||||| |||    
T  1372112 gtttggattgacttatttttgagcttatgcaaaacagtttatgtaaataaatacacttttatgtattatttataagcttgtaaatgtggtttatga-aaa 1372014  T
Q  235 acagcttatgaagatacaattttcgttattgaga 268  Q
    |||| | ||||||||  ||||||||||| |||||    
T  1372013 acagttgatgaagatttaattttcgttaatgaga 1371980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 3520621 - 3520509
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 234  Q
    |||||||||||||||| ||| |||||||||||||  | ||||| |||||||||  |||||| ||| |||||||||| | |||||||||||||| || |||    
T  3520621 gtttggattgacttattttttagcttatgcaaaacagtttatgtaaataaataacctttta-gtattattcataagcttgtcaaggtagtttaggacaaa 3520523  T
Q  235 acagcttatgaaga 248  Q
    ||||||||||||||    
T  3520522 acagcttatgaaga 3520509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 35536845 - 35536948
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcat---aagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgag 267  Q
    ||||||||||||| |||  |||||||||  |||||||   ||| | |||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  35536845 gcttatgcaaatacataagcttttatgtgttattcatcataagcttgtcaagatagtttatgaaaaaacagcttatgaagatacaattttcgttactgag 35536944  T
Q  268 aact 271  Q
    ||||    
T  35536945 aact 35536948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 128 - 260
Target Start/End: Original strand, 15122505 - 15122636
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 227  Q
    ||||||||||||||||  ||||| || ||||||||  ||||   |||||||||| |||||   ||||||||| |||| |||||||  | |||||||||||    
T  15122505 agggcccgtttggattagcttattttagagcttatataaaacaacttatgcaaagaaataagtttttatgtattatttataagttttt-aaggtagttta 15122603  T
Q  228 tgaaaaaacagcttatgaagatacaattttcgt 260  Q
    ||||||||||| |||||||||||||||||||||    
T  15122604 tgaaaaaacagtttatgaagatacaattttcgt 15122636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 128 - 268
Target Start/End: Original strand, 26002957 - 26003097
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 227  Q
    |||| ||||||||||| |||||| || |||||||| |||||  | |||||||||||||||   ||||||||| |||| ||||||| || ||| || ||||    
T  26002957 agggtccgtttggattaacttattttagagcttatacaaaacagtttatgcaaataaataagtttttatgtattatttataagtttgttaagttatttta 26003056  T
Q  228 tgaaaaaacagcttatgaagatacaattttcgttattgaga 268  Q
    |||||||   | ||||||||||||||||||||||| |||||    
T  26003057 tgaaaaagtggtttatgaagatacaattttcgttagtgaga 26003097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 41059872 - 41059772
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    ||||||||||| |||||  |||||||||| |||||||||| |  ||||||| |||||||||||| || ||||||||||| |||||||||||| |||||||    
T  41059872 gcttatgcaaacaaataagcttttatgtattattcataagcttatcaaggttgtttatgaaaaatcaccttatgaagattcaattttcgttagtgagaac 41059773  T
Q  271 t 271  Q
    |    
T  41059772 t 41059772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 171 - 260
Target Start/End: Original strand, 42706799 - 42706890
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttat--gaaaaaacagcttatgaagatacaattttcgt 260  Q
    |||||||||||||||||  |||||| ||| |||||||||| | |||||||||||||||   |||||||||||||||||||||||||||||||    
T  42706799 gcttatgcaaataaataagcttttaagtattattcataagcttgtcaaggtagtttataaaaaaaaacagcttatgaagatacaattttcgt 42706890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 152 - 271
Target Start/End: Complemental strand, 2878778 - 2878660
Alignment:
Q  152 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 251  Q
    ||||||||||||| |||  |||||||||||||||||  ||||||| || |||||||||||| ||||| || |||||||||| ||||| ||| ||||||||    
T  2878778 tttgagcttatgctaaacagcttatgcaaataaataagcttttatctattattcataagtttgtcaatgtggtttatgaaacaacagttta-gaagatac 2878680  T
Q  252 aattttcgttattgagaact 271  Q
    |||||| |||| ||| ||||    
T  2878679 aatttttgttagtgaaaact 2878660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 190 - 261
Target Start/End: Complemental strand, 31637158 - 31637087
Alignment:
Q  190 cttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtt 261  Q
    |||||||||| |||||||||| | ||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  31637158 cttttatgtattattcataagcttgtcaaggtaatttatgaaagaacagcttatgaagatacaattttcgtt 31637087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 122 - 271
Target Start/End: Complemental strand, 7364441 - 7364292
Alignment:
Q  122 agctttagggcccgtttggattga-cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaagg 220  Q
    |||||| |||||| |||||||||| ||||| |||||||||||| ||||  ||| ||||||| |||||  ||| ||| || |||||||||| | || ||||    
T  7364441 agcttttgggcccatttggattgagcttat-tttgagcttatgtaaaacagctgatgcaaaaaaataagcttctatttattattcataagcttgttaagg 7364343  T
Q  221 tagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||| || ||||| |||||||||||||||| || |||| ||||||||    
T  7364342 tagtttatcaacaaacaacttatgaagatacaatatttgttagtgagaact 7364292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 132 - 253
Target Start/End: Original strand, 341954 - 342075
Alignment:
Q  132 cccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 231  Q
    ||||||||||| | ||||| ||||||||||||||||    || ||| |||||||||   ||||||||| |||| | ||||| | ||||||||||||||||    
T  341954 cccgtttggatcggcttatttttgagcttatgcaaagcaactcatgtaaataaataagtttttatgtattatttacaagtttgccaaggtagtttatgaa 342053  T
Q  232 aaaacagcttatgaagatacaa 253  Q
    ||| ||||||||||||||||||    
T  342054 aaatcagcttatgaagatacaa 342075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 2670059 - 2670140
Alignment:
Q  152 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 233  Q
    |||||||||||| ||||  | ||||||||||||| |  ||||||||||||||||||||||| ||||||||||||||||||||    
T  2670059 tttgagcttatgtaaaacagtttatgcaaataaacaatcttttatgtactattcataagtttgtcaaggtagtttatgaaaa 2670140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 128 - 233
Target Start/End: Complemental strand, 11163395 - 11163290
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 227  Q
    ||||||||||||||||||||||| ||| |||||||||||||  ||||||| |||| ||||   |||||||||  ||||||||| | ||| ||||||||||    
T  11163395 agggcccgtttggattgacttattttttagcttatgcaaaacagcttatgtaaatcaataagtttttatgtatgattcataagcttgtcgaggtagttta 11163296  T
Q  228 tgaaaa 233  Q
    ||||||    
T  11163295 tgaaaa 11163290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 140 - 233
Target Start/End: Original strand, 17128250 - 17128343
Alignment:
Q  140 gattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 233  Q
    ||||||||||| |||||||||||||||||  |||||||||||||||||  |||||||||| |||||||||  |  |||| ||||||||||||||    
T  17128250 gattgacttatttttgagcttatgcaaaacagcttatgcaaataaataagcttttatgtattattcataaacttatcaaagtagtttatgaaaa 17128343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 40452561 - 40452460
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaa-ttttcgttattgagaa 269  Q
    |||||||||||  ||||  |||||||| | |||||||||| | |||||||||||||||||| |||||||||||||||||| || ||||||||| ||||||    
T  40452561 gcttatgcaaaggaataagcttttatgcattattcataagcttgtcaaggtagtttatgaagaaacagcttatgaagatataatttttcgttagtgagaa 40452462  T
Q  270 ct 271  Q
    ||    
T  40452461 ct 40452460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 43318981 - 43319106
Alignment:
Q  146 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 245  Q
    ||||| || ||||||||||||||   ||||||||||||||||    |||||||| |||| ||||| | || || ||||||||||||||||||| ||||||    
T  43318981 cttattttagagcttatgcaaaacaacttatgcaaataaatatgtctttatgtattatttataagcttgttaatgtagtttatgaaaaaacagtttatga 43319080  T
Q  246 agatacaattttcgttattgagaact 271  Q
    || || ||||||||||| ||||||||    
T  43319081 aggtataattttcgttagtgagaact 43319106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 28357355 - 28357455
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    |||||||||||||||||  | | |||||| |||| ||||||| || || ||||||||||||||||||| |||||||| | |||||||||||| |||||||    
T  28357355 gcttatgcaaataaatatgcctatatgtattatttataagtttgttaatgtagtttatgaaaaaacagtttatgaaggtccaattttcgttagtgagaac 28357454  T
Q  271 t 271  Q
    |    
T  28357455 t 28357455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 5559985 - 5559904
Alignment:
Q  191 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaa---cagcttatgaagatacaattttcgttattgagaa 269  Q
    ||||||||| | |||||||| | ||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||    
T  5559985 ttttatgtattcttcataagctcgtcaaggtagtttatgaaaaaaaagcagcttatgaagatacaattttcgttagtgagaa 5559904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 135 - 257
Target Start/End: Complemental strand, 40416091 - 40415969
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 234  Q
    ||||||||||| ||||  | ||||||||||||||   ||||||||||||| || || || ||||| |||| ||||||| || ||||||||| ||||||||    
T  40416091 gtttggattgatttattatagagcttatgcaaaacaacttatgcaaataactaaacattaatgtattatttataagtttgttaaggtagttcatgaaaaa 40415992  T
Q  235 acagcttatgaagatacaatttt 257  Q
    ||| |||| ||| ||||||||||    
T  40415991 acaacttaagaatatacaatttt 40415969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 10537320 - 10537235
Alignment:
Q  153 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 238  Q
    ||||||||||| ||||  |||||||||||||||||  |||||||||| |||| ||||| | |||||| ||||||||||||||||||    
T  10537320 ttgagcttatgtaaaacagcttatgcaaataaataagcttttatgtattatttataagcttgtcaagatagtttatgaaaaaacag 10537235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 174 - 271
Target Start/End: Complemental strand, 11912182 - 11912085
Alignment:
Q  174 tatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||| ||||||||  |||||||||| | |||||||  | ||||| ||||||| |||||||| ||||||||||||||||||||| |||| ||||||||    
T  11912182 tatgctaataaataagcttttatgtattgttcataatcttgtcaaagtagtttgtgaaaaaagagcttatgaagatacaatttttgttagtgagaact 11912085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 13625604 - 13625503
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatga-aaaaacagcttatgaagatacaattttcgttattgagaa 269  Q
    |||||||||||||||||  ||||||| || |||||||||| | ||  ||||||||||||| ||||||||||||| |||||| ||||||||||| ||| ||    
T  13625604 gcttatgcaaataaatatgcttttatttattattcataagcttgttgaggtagtttatgataaaaacagcttataaagataaaattttcgttagtgaaaa 13625505  T
Q  270 ct 271  Q
    ||    
T  13625504 ct 13625503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 125 - 271
Target Start/End: Complemental strand, 780696 - 780551
Alignment:
Q  125 tttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 224  Q
    |||||||| ||||||||||  ||||| || ||||||||  ||||  | ||||||||||||||| | ||||||||| |||| |||||||  | ||||||||    
T  780696 tttagggctcgtttggattagcttattttagagcttatataaaacagtttatgcaaataaatacatttttatgtattatttataagtt-tttaaggtagt 780598  T
Q  225 ttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||||  | |||| || ||||||||||| ||| | ||||||    
T  780597 ttatgaaaaaatgggttatcaaaatacaattttcattagtcagaact 780551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 127 - 261
Target Start/End: Complemental strand, 20458684 - 20458551
Alignment:
Q  127 tagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttt 226  Q
    |||||| ||||||||||  ||||| || ||||||||  ||||  ||||||||||||||||| | ||||||||| |||| |||||||  | ||||||||||    
T  20458684 tagggctcgtttggattagcttattttagagcttatataaaacagcttatgcaaataaatacatttttatgtattatttataagtt-tttaaggtagttt 20458586  T
Q  227 atgaaaaaacagcttatgaagatacaattttcgtt 261  Q
    || ||||||    ||||||| ||||||||||||||    
T  20458585 ataaaaaaatgtgttatgaaaatacaattttcgtt 20458551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 1576816 - 1576743
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaat-gcttatgcaaataaatagacttttatgt 198  Q
    ||||||||||||||||||| ||||| |||||||||||| |||| | ||||||||||||||||| | ||||||||    
T  1576816 ttagggcccgtttggattggcttatttttgagcttatgaaaaattagcttatgcaaataaatacagttttatgt 1576743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 1607999 - 1608072
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaat-gcttatgcaaataaatagacttttatgt 198  Q
    ||||||||||||||||||| ||||| |||||||||||| |||| | ||||||||||||||||| | ||||||||    
T  1607999 ttagggcccgtttggattggcttatttttgagcttatgaaaaattagcttatgcaaataaatacagttttatgt 1608072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 176 - 244
Target Start/End: Original strand, 3977483 - 3977551
Alignment:
Q  176 tgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatg 244  Q
    |||||||||||| |||||| || | |||||||||| | ||||||||||||||||||||||||| |||||    
T  3977483 tgcaaataaataaacttttgtgcattattcataagcttgtcaaggtagtttatgaaaaaacagtttatg 3977551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 179 - 271
Target Start/End: Original strand, 6144749 - 6144841
Alignment:
Q  179 aaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||  ||||||| || || ||||||| | ||||||||| |||||||||||| |||||||||| |||||||||| ||||  |||||||    
T  6144749 aaataaataagcttttatatattactcataagcttgtcaaggtattttatgaaaaaatagcttatgaatatacaatttttgttagcgagaact 6144841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 11707015 - 11706915
Alignment:
Q  157 gcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattt 256  Q
    ||||||||||||  || ||||||||||||||  ||||||||||  |||| |||  | ||||| ||| |||||||| ||||| ||||||||||||||||||    
T  11707015 gcttatgcaaaacagcctatgcaaataaataagcttttatgtatcattcctaaacttgtcaatgtattttatgaagaaacaacttatgaagatacaattt 11706916  T
Q  257 t 257  Q
    |    
T  11706915 t 11706915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 136 - 268
Target Start/End: Original strand, 11991273 - 11991404
Alignment:
Q  136 tttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa 235  Q
    ||||||||||||||| ||   ||||||||||||   |||||| |||||||||  |||||||||| |||| ||||| | || ||  | |||||||||||||    
T  11991273 tttggattgacttattttaatgcttatgcaaaacaacttatgtaaataaataagcttttatgtattatttataagcttgtaaatatggtttatgaaaaaa 11991372  T
Q  236 cagcttatgaagatacaattttcgttattgaga 268  Q
     || ||||||| ||||||||||||||| |||||    
T  11991373 tag-ttatgaacatacaattttcgttagtgaga 11991404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 214 - 262
Target Start/End: Original strand, 28357187 - 28357235
Alignment:
Q  214 gtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  28357187 gtcaatgtagtttatgaaaaaacaggttatgaagatacaattttcgtta 28357235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 127 - 259
Target Start/End: Complemental strand, 33667519 - 33667388
Alignment:
Q  127 tagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttt 226  Q
    |||||||||||||||||  ||||| || ||||||||  ||||  |||||||||||||||||   ||||||||| |||| | |||||  | ||||||||||    
T  33667519 tagggcccgtttggattagcttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttacaagtt-tttaaggtagttt 33667421  T
Q  227 atgaaaaaacagcttatgaagatacaattttcg 259  Q
    |||| |||| ||  ||||||||||| |||||||    
T  33667420 atgacaaaatagtatatgaagatacgattttcg 33667388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 125 - 257
Target Start/End: Original strand, 33757045 - 33757176
Alignment:
Q  125 tttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 224  Q
    ||||| || ||||||||||  ||||| || ||||||||  ||||  |||||||||||||||||   ||||||||| |||| |||||||  | ||| ||||    
T  33757045 tttagagctcgtttggattagcttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataagtt-tttaagctagt 33757143  T
Q  225 ttatgaaaaaacagcttatgaagatacaatttt 257  Q
    |||||||||||||| | |||||||||| |||||    
T  33757144 ttatgaaaaaacagttaatgaagatacgatttt 33757176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 131 - 235
Target Start/End: Complemental strand, 42558842 - 42558740
Alignment:
Q  131 gcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatga 230  Q
    |||| ||||||||||||||| |||| | ||||||||||  |||||||  ||||||||  |||||| |||||||||||||||| || || |||||||||||    
T  42558842 gcccatttggattgacttatttttg-gattatgcaaaacagcttatgtgaataaataagcttttacgtactattcataagtttgttaa-gtagtttatga 42558745  T
Q  231 aaaaa 235  Q
    |||||    
T  42558744 aaaaa 42558740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 43268704 - 43268644
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 231  Q
    |||||||||||||||||  |||||||||| |||| ||||| ||||||||||||||||||||    
T  43268704 gcttatgcaaataaataagcttttatgtattattaataagctggtcaaggtagtttatgaa 43268644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 257
Target Start/End: Original strand, 40697004 - 40697095
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg-----aaaaaacagcttatgaagatacaatttt 257  Q
    |||||||||||||||||   ||||||||| |||| ||||| | ||||||||| ||||||     ||||||||||||||||||||||||||||    
T  40697004 gcttatgcaaataaataagtttttatgtattatttataagcttgtcaaggtattttatgaagaaaaaaaacagcttatgaagatacaatttt 40697095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 125 - 257
Target Start/End: Complemental strand, 7111112 - 7110984
Alignment:
Q  125 tttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 224  Q
    ||||||| ||||||||||||  |||| ||| |||| ||||||||   | ||||||||||||||   | |||| || |||||||||| | |||||   |||    
T  7111112 tttaggggccgtttggattggtttattttttagctcatgcaaaataacctatgcaaataaataagttcttatttattattcataagattgtcaa---agt 7111016  T
Q  225 ttatgaaaaaacagcttatgaagatacaatttt 257  Q
    |||||||||| ||||||||||||||||||||||    
T  7111015 ttatgaaaaa-cagcttatgaagatacaatttt 7110984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 35537028 - 35536945
Alignment:
Q  127 tagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagtt 212  Q
    ||||| |||||||||||||||||| |||||| ||||| ||||  |||||||||||||||||  ||||||  || ||||||||||||    
T  35537028 tagggtccgtttggattgacttatttttgagattatgaaaaatagcttatgcaaataaataagctttta--tattattcataagtt 35536945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 179 - 268
Target Start/End: Complemental strand, 38461357 - 38461268
Alignment:
Q  179 aaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgaga 268  Q
    |||||||||  | |||||||| |||| ||||||| || || ||| ||||||||||||||| ||||||||||| |||||| |||| |||||    
T  38461357 aaataaataagcctttatgtattatttataagtttgtaaatgtattttatgaaaaaacagtttatgaagatataatttttgttagtgaga 38461268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 39154801 - 39154744
Alignment:
Q  214 gtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||||||||||||||||| | |||||||||| |||||||  ||||||||||||    
T  39154801 gtcaaggtagtttatgaaaaaactgattatgaagatgcaatttttattattgagaact 39154744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 17868105 - 17868177
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    ||||||| ||||||||||| ||||| ||| |||||||| ||||  |||||||||||||||||  |||||||||    
T  17868105 ttagggctcgtttggattggcttattttttagcttatggaaaatagcttatgcaaataaataaccttttatgt 17868177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 40152939 - 40152859
Alignment:
Q  191 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||| || ||| ||||| || || ||| |||||||||||||||||  ||||||||||| |||||||||| |||||||||    
T  40152939 ttttatttattatccataaatttgttaagatagtttatgaaaaaacaatttatgaagataaaattttcgttcttgagaact 40152859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 262
Target Start/End: Complemental strand, 6026083 - 6025977
Alignment:
Q  155 gagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaat 254  Q
    |||||||| |||||  | |||||||||||||||   ||||||||| |||| |||| || || || ||||||||||||||||| | |||| ||||||||||    
T  6026083 gagcttatacaaaatagtttatgcaaataaatatg-ttttatgtattatttataattttgttaacgtagtttatgaaaaaacggtttataaagatacaat 6025985  T
Q  255 tttcgtta 262  Q
    ||| ||||    
T  6025984 ttttgtta 6025977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 172 - 271
Target Start/End: Original strand, 7984109 - 7984208
Alignment:
Q  172 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||||||| ||   ||||||||| |||||||||||| ||||| || ||||  |||||||||| |||  |||||||||||||| | | ||||||||    
T  7984109 cttatgcaaataactaagtttttatgtattattcataagtttgtcaaagttgtttgagaaaaaacagtttacaaagatacaattttcataagtgagaact 7984208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 170 - 269
Target Start/End: Complemental strand, 29418836 - 29418737
Alignment:
Q  170 tgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaa 269  Q
    ||||||||||||||||||    |||||||| |||| |||||   |  || ||||||||||||||||||  |||||||| |||||||||||||| ||||||    
T  29418836 tgcttatgcaaataaatatgtctttatgtattatttataagcatgctaatgtagtttatgaaaaaacaatttatgaaggtacaattttcgttagtgagaa 29418737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 2577540 - 2577482
Alignment:
Q  129 gggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 187  Q
    |||||||||||||||| ||||| ||| ||||||| |||||  |||||||||||||||||    
T  2577540 gggcccgtttggattggcttattttttagcttatccaaaacagcttatgcaaataaata 2577482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 228
Target Start/End: Original strand, 6150346 - 6150437
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttat 228  Q
    ||||||| ||| |||||| |||||| ||||||||||  |||||||||||| |      ||||||||| |||||||||||| |||||||||||||||    
T  6150346 ccgtttgaattcacttatttttgagtttatgcaaaacagcttatgcaaatgagg----ttttatgtattattcataagtttgtcaaggtagtttat 6150437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 198
Target Start/End: Complemental strand, 27806098 - 27806028
Alignment:
Q  129 gggcccgtttggattgacttatctttgagcttatgcaaaaat-gcttatgcaaataaatagacttttatgt 198  Q
    |||||||||||||||| ||||  ||| |||||||  |||||| ||||||||||||||||| ||||||||||    
T  27806098 gggcccgtttggattggcttactttttagcttattaaaaaatagcttatgcaaataaataaacttttatgt 27806028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 250
Target Start/End: Complemental strand, 27982026 - 27981916
Alignment:
Q  140 gattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagc 239  Q
    ||||||||||| ||||| ||||| |||||   |||||| ||||||||| | ||||||||| ||||||||| ||  |  ||||| |||||||||||||| |    
T  27982026 gattgacttatttttgaacttatacaaaacatcttatgaaaataaataaatttttatgtattattcataaatttatttaggtaatttatgaaaaaacaac 27981927  T
Q  240 ttatgaagata 250  Q
    | || ||||||    
T  27981926 taataaagata 27981916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 41125671 - 41125733
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatg 197  Q
    |||||||||| ||||| |||||||||||||||||   |||||||||||||| || ||||||||    
T  41125671 gtttggattggcttatttttgagcttatgcaaaacaacttatgcaaataaacaggcttttatg 41125733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 29659065 - 29659163
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    ||||||||||||||||  |  |||||||| |||| ||||| | || || |||||||| |||||||||| |||||||  |||||||||| ||| |||||||    
T  29659065 gcttatgcaaataaat--atgtttatgtattatttataagcttgttaatgtagtttaagaaaaaacagtttatgaaagtacaattttcattagtgagaac 29659162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 30852176 - 30852237
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 234  Q
    ||||||||||||||| ||||||||||| |||| ||||||| || || ||||||||| |||||    
T  30852176 ttatgcaaataaataaacttttatgtattattaataagttcgtaaatgtagtttataaaaaa 30852237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 172 - 257
Target Start/End: Original strand, 39990580 - 39990665
Alignment:
Q  172 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaatttt 257  Q
    ||||| |||||||||| || || ||||| |||| ||| ||| || |||||| |||||||||||||| |||| ||| ||||||||||    
T  39990580 cttatacaaataaataaacattaatgtattatttatatgtttgttaaggtaatttatgaaaaaacatcttaagaatatacaatttt 39990665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 246
Target Start/End: Original strand, 4728804 - 4728923
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 225  Q
    ||||||||| ||||||||   |||| || ||||||||  ||||  |||||||||||||||||   ||||||||| |||  | |||||  | |||||||||    
T  4728804 ttagggcccatttggattaggttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatctacaagttttt-aaggtagtt 4728902  T
Q  226 tatgaaaaaacagcttatgaa 246  Q
    ||||||||||||| |||||||    
T  4728903 tatgaaaaaacagtttatgaa 4728923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 14244009 - 14243949
Alignment:
Q  127 tagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 187  Q
    ||||| |||||||||| ||||||| |||||||||||| ||||  |||| ||||||||||||    
T  14244009 tagggtccgtttggatagacttatttttgagcttatgaaaaatagcttttgcaaataaata 14243949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 23087842 - 23087762
Alignment:
Q  191 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||| |||| ||||| | || ||  ||||||||||||||||| || |||||| ||||||||| |||| ||||||||    
T  23087842 ttttatgtattatttataagcttgttaatatagtttatgaaaaaacaactcatgaaggtacaatttttgttagtgagaact 23087762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 40452388 - 40452463
Alignment:
Q  136 tttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagtt 212  Q
    ||||||||| ||||| |||||||||||| ||||  |||||||||||||||||  || ||||||  ||||||||||||    
T  40452388 tttggattggcttatttttgagcttatgaaaaatagcttatgcaaataaataagctattatgt-ttattcataagtt 40452463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 9477388 - 9477439
Alignment:
Q  220 gtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||| |||||||||||||| | |||||| |||||||||||||| ||||||||    
T  9477388 gtaggttatgaaaaaacagttcatgaaggtacaattttcgttactgagaact 9477439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 16722032 - 16722126
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgaga 268  Q
    |||||||||||||||   ||||||||| |||| |||| ||  | ||||||||||| ||| |||| | ||||||||||||| ||||||||| |||||    
T  16722032 ttatgcaaataaataagtttttatgtattatttataaattttt-aaggtagtttacgaagaaaccgtttatgaagatacacttttcgttagtgaga 16722126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 198
Target Start/End: Complemental strand, 40697182 - 40697119
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    |||||||||| ||||| |||||||||||| ||||  |||||| ||||||||||  |||||||||    
T  40697182 gtttggattggcttatttttgagcttatgaaaaatagcttatacaaataaataagcttttatgt 40697119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 262
Target Start/End: Original strand, 42808878 - 42808945
Alignment:
Q  195 atgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    ||||| |||||||||||| || ||  ||||| ||| |||||||  |||||||||||||||||||||||    
T  42808878 atgtattattcataagtttgtaaacatagttaatgcaaaaacaatttatgaagatacaattttcgtta 42808945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 202 - 271
Target Start/End: Complemental strand, 2577481 - 2577411
Alignment:
Q  202 attcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaa-ttttcgttattgagaact 271  Q
    ||||||||| | ||||||||| |||||||||||||| ||| | || |||||| ||||||||| ||||||||    
T  2577481 attcataagcttgtcaaggtaatttatgaaaaaacaacttgtaaaaatacaatttttcgttagtgagaact 2577411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 133 - 198
Target Start/End: Original strand, 2878584 - 2878650
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaat-gcttatgcaaataaatagacttttatgt 198  Q
    |||||||||||| ||||| ||| |||||||| |||||| ||||||| |||||||||  |||||||||    
T  2878584 ccgtttggattggcttattttttagcttatgaaaaaatagcttatgtaaataaataagcttttatgt 2878650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 125 - 235
Target Start/End: Original strand, 17668357 - 17668466
Alignment:
Q  125 tttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 224  Q
    ||||||| || ||||||||  ||||| || ||||||||  ||||   |||||||||||||||||   |||||||| |||| |||||||  | ||||||||    
T  17668357 tttagggtccttttggattagcttattttagagcttatataaaacaacttatgcaaataaataggtgtttatgtattatttataagtt-tttaaggtagt 17668455  T
Q  225 ttatgaaaaaa 235  Q
    |||||||||||    
T  17668456 ttatgaaaaaa 17668466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 42558622 - 42558688
Alignment:
Q  130 ggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttat 196  Q
    |||| ||||| |||| ||||| |||||||||||| ||||  |||||||||||||||||  |||||||    
T  42558622 ggcctgtttgaattggcttatttttgagcttatgaaaaatagcttatgcaaataaataagcttttat 42558688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 1869021 - 1868968
Alignment:
Q  131 gcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataa 184  Q
    |||||||||||||| ||||| || ||||||||| ||||  ||||||||||||||    
T  1869021 gcccgtttggattggcttattttcgagcttatgaaaaatagcttatgcaaataa 1868968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 198
Target Start/End: Complemental strand, 3977659 - 3977586
Alignment:
Q  125 tttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    |||||||||||||||  ||| ||||| ||| |||||||  ||||  |||||||||||||||||  |||||||||    
T  3977659 tttagggcccgtttgcgttgtcttatttttcagcttattaaaaacagcttatgcaaataaataagcttttatgt 3977586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 6125291 - 6125387
Alignment:
Q  172 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaa 269  Q
    |||||| ||||||||| ||||||||||| |||||||||  |  | || ||| |||||| ||||| |||||||||| ||||||| || |||| ||||||    
T  6125291 cttatgtaaataaataaacttttatgtattattcataatcttataaatgtattttatg-aaaaatagcttatgaatatacaatatttgttagtgagaa 6125387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 196
Target Start/End: Complemental strand, 6125462 - 6125401
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttat 196  Q
    |||||||||||||| | ||||| |||||| ||||  |||||||||||||||||  |||||||    
T  6125462 gtttggattgacttctttttgaacttatgaaaaatagcttatgcaaataaataagcttttat 6125401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 258
Target Start/End: Complemental strand, 15710016 - 15709888
Alignment:
Q  129 gggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttat 228  Q
    |||||||||||||||  ||||| || ||||||||  ||||   ||||||||||||||||   |||| |||| |||| |||||||  | || |||||||||    
T  15710016 gggcccgtttggattagcttattttagagcttatataaaacaacttatgcaaataaataagtttttctgtattatttataagtt-tttaaagtagtttat 15709918  T
Q  229 gaaaaaacagcttatgaagatacaattttc 258  Q
    |||||||  | | ||| |||||||||||||    
T  15709917 gaaaaaatcgttaatgtagatacaattttc 15709888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 22573637 - 22573718
Alignment:
Q  152 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 233  Q
    |||||||||||||||||   |||||||||||||||    |||| |||| |||| ||||||| || || ||||||||||||||    
T  22573637 tttgagcttatgcaaaacaacttatgcaaataaatgagtttttttgtattatttataagtttgtaaatgtagtttatgaaaa 22573718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 27805961 - 27806018
Alignment:
Q  214 gtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||| ||||||||||||||||||  |||| ||||||||||||| |||| ||| ||||    
T  27805961 gtcaatgtagtttatgaaaaaacatgttataaagatacaatttttgttagtgaaaact 27806018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 33803874 - 33803814
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactat--tcataagttggtcaaggtagtttatgaa 231  Q
    |||||||||| ||||  ||||||||||||||  |||||| || ||||||||||||||||||    
T  33803874 ttatgcaaatcaataagcttttatgtactatattcataaatttgtcaaggtagtttatgaa 33803814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 198
Target Start/End: Original strand, 41059689 - 41059762
Alignment:
Q  125 tttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    ||||||| | |||||||| | ||||| |||||||||||| ||||  | |||||||||||||||  |||||||||    
T  41059689 tttagggtctgtttggatgggcttatttttgagcttatgaaaaacagtttatgcaaataaataagcttttatgt 41059762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 1943013 - 1943073
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 231  Q
    |||||||||| ||||||   ||||||||| ||| |||||| | ||||||||||||||||||    
T  1943013 gcttatgcaagtaaataagtttttatgtattatccataagcttgtcaaggtagtttatgaa 1943073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 3520409 - 3520481
Alignment:
Q  127 tagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgta 199  Q
    ||||||| |||||||||||||||| ||| |  ||||| ||||  ||||| |||||||||||  ||||||||||    
T  3520409 tagggcctgtttggattgacttatttttaatattatgaaaaatagcttacgcaaataaataagcttttatgta 3520481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #94
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 6150855 - 6150895
Alignment:
Q  231 aaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||||||||| |||||||||| |||| ||||||||    
T  6150855 aaaaacagcttatgaatatacaatttttgttactgagaact 6150895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #95
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 12467453 - 12467381
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    ||||||||| ||||||||| ||||| ||| || ||||| ||||   ||||||||||||||||  |||||||||    
T  12467453 ttagggcccttttggattggcttattttttaggttatgaaaaataacttatgcaaataaataagcttttatgt 12467381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #96
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 13739243 - 13739295
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 187  Q
    |||||| ||||||||| ||||||||||| |||||  ||||||||| |||||||    
T  13739243 gtttgggttgacttatttttgagcttattcaaaacagcttatgcatataaata 13739295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #97
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 13739407 - 13739343
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatg 197  Q
    |||||||||||| ||||| |||||| ||||| ||||   ||||||||||||||||  ||||||||    
T  13739407 ccgtttggattggcttatttttgagtttatgaaaaataacttatgcaaataaataagcttttatg 13739343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #98
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 135 - 231
Target Start/End: Complemental strand, 25332357 - 25332261
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 231  Q
    |||||||||| ||||| || ||| ||||| ||||  |||||||||||||||||  | || || || |||| ||||||| || |||||| ||||||||    
T  25332357 gtttggattgtcttattttagagtttatgtaaaatagcttatgcaaataaataagcattaatatattatttataagtttgttaaggtaatttatgaa 25332261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #99
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 43010639 - 43010695
Alignment:
Q  172 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttat 228  Q
    |||||| ||||||||| ||||||||||| |||||||| ||| ||||  |||||||||    
T  43010639 cttatgtaaataaataaacttttatgtattattcatacgtttgtcattgtagtttat 43010695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 1e-27; HSPs: 59)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 126 - 261
Target Start/End: Complemental strand, 21891466 - 21891331
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 225  Q
    |||||||||||||||||||| | || |||||||||||||| ||  |||||||||||||||||   ||| || || |||||||||| | ||||| ||||||    
T  21891466 ttagggcccgtttggattgattaatttttgagcttatgcagaatagcttatgcaaataaataagttttgatatattattcataagcttgtcaatgtagtt 21891367  T
Q  226 tatgaaaaaacagcttatgaagatacaattttcgtt 261  Q
    ||||||| |||| |||||||||||| ||||||||||    
T  21891366 tatgaaataacaacttatgaagatagaattttcgtt 21891331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 135 - 257
Target Start/End: Complemental strand, 25430882 - 25430762
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg-aaaa 233  Q
    |||||||||||||||| |||||||||||| ||||  |||||| ||||||||||  | ||||||   |||||||||| | |||||||||||||||| ||||    
T  25430882 gtttggattgacttatttttgagcttatgtaaaacagcttatacaaataaataagcatttatg---tattcataagcttgtcaaggtagtttatgaaaaa 25430786  T
Q  234 aacagcttatgaagatacaatttt 257  Q
    ||||||||||||||||||||||||    
T  25430785 aacagcttatgaagatacaatttt 25430762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 171 - 260
Target Start/End: Complemental strand, 2034312 - 2034223
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgt 260  Q
    |||||||||||||||||  |||||||||| |||| ||||||| |||||||||||||||||||||||| ||||  ||||||||||||||||    
T  2034312 gcttatgcaaataaataagcttttatgtattatttataagtttgtcaaggtagtttatgaaaaaacaacttaccaagatacaattttcgt 2034223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 153 - 270
Target Start/End: Original strand, 2255719 - 2255836
Alignment:
Q  153 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 252  Q
    ||||||||||||||||   |||||||||||||||   ||||||||||  ||||||||| | || |||||| |||||||||||||||||||||||||||||    
T  2255719 ttgagcttatgcaaaacgacttatgcaaataaatgagcttttatgtatgattcataagcttgttaaggtaatttatgaaaaaacagcttatgaagataca 2255818  T
Q  253 attttcgttattgagaac 270  Q
    ||||| | || |||||||    
T  2255819 atttttggtagtgagaac 2255836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 130 - 259
Target Start/End: Original strand, 7267737 - 7267866
Alignment:
Q  130 ggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg 229  Q
    ||||| ||||||||| ||| | ||| |||||| | ||||  ||||||||||| |||||  |||||||||| |||||||||| | | ||||||||||||||    
T  7267737 ggcccatttggattggcttgttttttagcttaagtaaaacggcttatgcaaacaaataagcttttatgtattattcataagcttgccaaggtagtttatg 7267836  T
Q  230 aaaaaacagcttatgaagatacaattttcg 259  Q
    |||||||| ||||||||| |||||||||||    
T  7267837 aaaaaacaacttatgaaggtacaattttcg 7267866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 122 - 271
Target Start/End: Original strand, 8014743 - 8014891
Alignment:
Q  122 agctttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggt 221  Q
    ||||||||| ||| ||||||||| ||||| |||||| ||||  ||||  |||||||||||||| ||  |||||||  | |||||||||| | ||||||||    
T  8014743 agctttaggacccatttggattggcttat-tttgagtttatagaaaacagcttatgcaaataagtaagcttttattcattattcataagcttgtcaaggt 8014841  T
Q  222 agtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||||||||| || ||||||||||||||||| |||| ||| ||||    
T  8014842 agtttatgaaaaaactgcatatgaagatacaattttggttagtgaaaact 8014891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 128 - 271
Target Start/End: Original strand, 17914906 - 17915048
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 227  Q
    ||||| |||||||||| |||||| || ||||||||  ||||  ||||||||||||||||| | ||||||||| |||| |||||||  | |||||||||||    
T  17914906 agggctcgtttggattaacttattttagagcttatataaaacagcttatgcaaataaatacatttttatgtattatttataagtt-tttaaggtagttta 17915004  T
Q  228 tgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||  | ||||||| ||||||||||||||| | ||||||    
T  17915005 tgaaaaaatgggttatgaaaatacaattttcgttagtcagaact 17915048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 128 - 254
Target Start/End: Original strand, 24625811 - 24625937
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 227  Q
    |||||| |||||||||| ||||| |||||| ||| |||| |   | ||||||||||||||  |||||||||| |||||||||| | || |||||||||||    
T  24625811 agggcctgtttggattgtcttatttttgaggttaggcaagacaacatatgcaaataaatacgcttttatgtattattcataagcttgttaaggtagttta 24625910  T
Q  228 tgaaaaaacagcttatgaagatacaat 254  Q
    |||||||  ||||||||||||||||||    
T  24625911 tgaaaaattagcttatgaagatacaat 24625937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 2027259 - 2027159
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    |||||||||||||||||  |||||||| | |||||| ||||| ||||||  |||||||||||||||||||||||||||||||| ||| |||| | |||||    
T  2027259 gcttatgcaaataaataagcttttatgcattattcagaagtttgtcaagacagtttatgaaaaaacagcttatgaagatacaacttttgttagtaagaac 2027160  T
Q  271 t 271  Q
    |    
T  2027159 t 2027159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 171 - 267
Target Start/End: Complemental strand, 21025310 - 21025214
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgag 267  Q
    |||||||||||||||||  |||||||||| ||| |||||| | || ||||||||||||||||||| ||| |||||||||||||| ||||||| ||||    
T  21025310 gcttatgcaaataaataagcttttatgtattatgcataagcttgttaaggtagtttatgaaaaaagagcctatgaagatacaatgttcgttactgag 21025214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 135 - 268
Target Start/End: Complemental strand, 3211120 - 3210982
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg----- 229  Q
    |||||||| | ||||| ||| ||||| |||||||  |||||||||||||||||  |||||||||| || | ||||| | ||||| ||||||||||         
T  3211120 gtttggatcggcttattttttagcttgtgcaaaacagcttatgcaaataaataagcttttatgtattactgataagcttgtcaatgtagtttatgaagaa 3211021  T
Q  230 aaaaaacagcttatgaagatacaattttcgttattgaga 268  Q
    ||||||||||||||||||||||||||||| ||| |||||    
T  3211020 aaaaaacagcttatgaagatacaattttcattaatgaga 3210982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 173 - 271
Target Start/End: Original strand, 16589756 - 16589854
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||| ||||||||  | ||||||||| |||||||||||| ||||| | ||||||||||||||||  |||||||||||  |||||||||||||||||||    
T  16589756 ttatgtaaataaattaatttttatgtattattcataagtttgtcaaaggagtttatgaaaaaacaatttatgaagatatgattttcgttattgagaact 16589854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 173 - 271
Target Start/End: Complemental strand, 16605624 - 16605526
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||| ||||||||  | ||||||||| |||||||||||| ||||| | ||||||||||||||||  |||||||||||  |||||||||||||||||||    
T  16605624 ttatgtaaataaattaatttttatgtattattcataagtttgtcaaaggagtttatgaaaaaacaatttatgaagatatgattttcgttattgagaact 16605526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 153 - 271
Target Start/End: Complemental strand, 29623578 - 29623460
Alignment:
Q  153 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 252  Q
    ||||||||||||||||   ||||||||||||||||  ||||||| || |||| || |||| || || |||||||||||||||||| |||||||| ||| |    
T  29623578 ttgagcttatgcaaaacaacttatgcaaataaataaccttttatttattatttatgagtttgttaatgtagtttatgaaaaaacaacttatgaaaataaa 29623479  T
Q  253 attttcgttattgagaact 271  Q
     ||||||||| ||||||||    
T  29623478 gttttcgttagtgagaact 29623460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 135 - 257
Target Start/End: Original strand, 10873952 - 10874073
Alignment:
Q  135 gtttggattgacttatcttt-gagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 233  Q
    |||||||||| ||||| ||| ||| ||||||||||  ||||||||| |||||||  ||||||| |  |||| ||||| | || |||||||||||||| ||    
T  10873952 gtttggattggcttattttttgagattatgcaaaatagcttatgcatataaataagcttttatat--tattaataagcttgttaaggtagtttatgagaa 10874049  T
Q  234 aacagcttatgaagatacaatttt 257  Q
    ||||||||||||||||||||||||    
T  10874050 aacagcttatgaagatacaatttt 10874073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 125 - 268
Target Start/End: Complemental strand, 32615543 - 32615401
Alignment:
Q  125 tttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 224  Q
    ||||| ||||||||||||| |||||| ||  |||||||  ||||  |||||||||||||||||   ||||||||| |||| |||| ||  | ||||||||    
T  32615543 tttagagcccgtttggattaacttattttatagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataaattttt-aaggtagt 32615445  T
Q  225 ttatgaaaaaacagcttatgaagatacaattttcgttattgaga 268  Q
    | ||||||||||   ||||||||||||||||||||||| |||||    
T  32615444 tgatgaaaaaactatttatgaagatacaattttcgttagtgaga 32615401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 153 - 271
Target Start/End: Original strand, 6758612 - 6758730
Alignment:
Q  153 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 252  Q
    ||||||||||||||||   ||||||||||||||||  ||||| | || ||| |||||| | || ||||||||||||||||||  | ||||| ||||||||    
T  6758612 ttgagcttatgcaaaacaacttatgcaaataaataagcttttgtttattatccataagcttgttaaggtagtttatgaaaaattaacttatcaagataca 6758711  T
Q  253 attttcgttattgagaact 271  Q
    | |||||||| ||||||||    
T  6758712 aatttcgttagtgagaact 6758730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 134 - 271
Target Start/End: Original strand, 10687273 - 10687413
Alignment:
Q  134 cgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtact---attcataagttggtcaaggtagtttatga 230  Q
    ||||| ||||||| ||| ||||||||||| |||||  |||||||||||||||||  |||| ||||| |   |||||||||    | |||||||||||||     
T  10687273 cgtttcgattgacgtatttttgagcttattcaaaacagcttatgcaaataaataagctttgatgtatttttattcataagcctattaaggtagtttatgt 10687372  T
Q  231 aaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||| |||||| |||||||||||||||||  |||||||    
T  10687373 aaaaacaacttatggagatacaattttcgttagcgagaact 10687413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 171 - 261
Target Start/End: Original strand, 29052336 - 29052426
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtt 261  Q
    |||||| |||| ||||| ||||||||||| |||| ||||||| || |||||| ||||||||||||||| |||||| ||||||||| |||||    
T  29052336 gcttatacaaaaaaataaacttttatgtattatttataagtttgttaaggtattttatgaaaaaacagtttatgatgatacaattctcgtt 29052426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 30533964 - 30534046
Alignment:
Q  152 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 234  Q
    ||||||||| |||||||  |||||||||||||||||  |||||||||| |||||||||||| || || |||||||||||||||    
T  30533964 tttgagcttgtgcaaaacagcttatgcaaataaataagcttttatgtattattcataagtttgtaaatgtagtttatgaaaaa 30534046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 9894728 - 9894833
Alignment:
Q  130 ggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg 229  Q
    ||||||||||||||  ||||| || |||||||| |||||  ||||| |||||||||||  |||||||||| |||| ||||||| || |||||| ||||||    
T  9894728 ggcccgtttggattagcttattttcgagcttatacaaaacagcttacgcaaataaataatcttttatgtattatttataagtttgttaaggtattttatg 9894827  T
Q  230 aaaaaa 235  Q
    ||||||    
T  9894828 aaaaaa 9894833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 6776811 - 6776911
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    |||||||||||||||||  ||||||| || ||| |||||| | || ||||||||||||| ||||| | ||||||||||||||| |||| ||| |||||||    
T  6776811 gcttatgcaaataaataagcttttatttaatatccataagcttgttaaggtagtttatggaaaaataacttatgaagatacaaatttcattagtgagaac 6776910  T
Q  271 t 271  Q
    |    
T  6776911 t 6776911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 271
Target Start/End: Complemental strand, 32675971 - 32675872
Alignment:
Q  172 cttatgcaaataaatagacttttatgtactattcataag-ttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    ||||||||||||||||  ||||||| || |||||||||| || || ||||| ||||||||||||| | |||||||||||||||||||| ||| |||||||    
T  32675971 cttatgcaaataaataagcttttatttattattcataagcttcgt-aaggttgtttatgaaaaaataacttatgaagatacaattttcattagtgagaac 32675873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 34801132 - 34801033
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    ||||||| ||||||||| |||||||| || ||||||||||||||| ||| ||||||||||||||||| | || | ||||||||||||  ||| |||||||    
T  34801132 gcttatgtaaataaataaacttttatttattattcataagttggt-aagatagtttatgaaaaaacaacctacggagatacaattttaattagtgagaac 34801034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 271
Target Start/End: Complemental strand, 3830021 - 3829902
Alignment:
Q  152 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 251  Q
    |||||||||||| ||||  |||||||||||||||||  ||||||| |  |||||||||  |  | | ||||||||||||||||||| ||||||||||||     
T  3830021 tttgagcttatgaaaaacggcttatgcaaataaatacgcttttatttgttattcataaagtttttatggtagtttatgaaaaaacaacttatgaagataa 3829922  T
Q  252 aattttcgttattgagaact 271  Q
    |||||| |||| | ||||||    
T  3829921 aatttttgttaataagaact 3829902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 1240693 - 1240595
Alignment:
Q  172 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa-cagcttatgaagatacaattttcgttattgagaa 269  Q
    ||||| ||||||||||  |||||||||| |||||||||| | ||||||||| |||| ||||||| || ||||||||||||| |||||| ||| ||||||    
T  1240693 cttattcaaataaataagcttttatgtattattcataagcttgtcaaggtaatttacgaaaaaaacaacttatgaagatacgattttcattagtgagaa 1240595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 10755363 - 10755266
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    |||||||||||||||||  |||||| ||| |||||||||| | |||||||||  ||||||||||| ||||||||||   ||||||||||||| | |||||    
T  10755363 gcttatgcaaataaataagcttttacgtattattcataagcttgtcaaggtaacttatgaaaaaatagcttatgaa---acaattttcgttagtaagaac 10755267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 10054384 - 10054482
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    |||||||||||||||||  |||||||||| |||||||||||| || || |||||||||||||||| |  ||||  ||||||||||||| ||| || ||||    
T  10054384 gcttatgcaaataaataagcttttatgtattattcataagtttgtaaatgtagtttatgaaaaaataatttat--agatacaattttcattagtgggaac 10054481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 135 - 247
Target Start/End: Original strand, 6632626 - 6632738
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 234  Q
    |||||||||  ||||| || |||||||| |||||   ||||||||||||||||  |||||||||| |||| ||||  | || || |||||||||||||||    
T  6632626 gtttggattagcttattttagagcttattcaaaacaacttatgcaaataaatatgcttttatgtattatttataaacttgttaatgtagtttatgaaaaa 6632725  T
Q  235 acagcttatgaag 247  Q
    ||| |||||||||    
T  6632726 acaacttatgaag 6632738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 155 - 271
Target Start/End: Complemental strand, 21610148 - 21610032
Alignment:
Q  155 gagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaat 254  Q
    ||||||||||||||  |||||||||||||||||    |||||| | |||| ||||| | || || |||||||||||||||| || ||||||| ||| |||    
T  21610148 gagcttatgcaaaacagcttatgcaaataaatatttctttatgaattatttataagcttgttaatgtagtttatgaaaaaatagtttatgaatatataat 21610049  T
Q  255 tttcgttattgagaact 271  Q
    |||||||| | ||||||    
T  21610048 tttcgttagtaagaact 21610032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 135 - 267
Target Start/End: Complemental strand, 21871402 - 21871271
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 234  Q
    ||||||||||  |||| ||| || ||||| ||||   ||||||||||||| || ||||||||||| |||| |||| ||| |||||||||||||||| |||    
T  21871402 gtttggattggtttattttttagtttatgtaaaacaacttatgcaaataagtaaacttttatgtattattgataacttg-tcaaggtagtttatgagaaa 21871304  T
Q  235 acagcttatgaagatacaattttcgttattgag 267  Q
      ||||||||| |||  ||||||||||| ||||    
T  21871303 gtagcttatgatgatttaattttcgttagtgag 21871271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 32165295 - 32165247
Alignment:
Q  220 gtagtttatgaaaaaacagcttatgaagatacaattttcgttattgaga 268  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  32165295 gtagtttatgaaaaaacagtttatgaagatacaattttcgttagtgaga 32165247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 262
Target Start/End: Original strand, 4808540 - 4808665
Alignment:
Q  136 tttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagactttt-atgtactattcataagttggtcaaggtagtttatgaaaaa 234  Q
    ||||||||  ||||| || ||||||||  ||||  |||||||||||||||| || |||| ||||| |||| |||||||  | ||| ||||||||||||||    
T  4808540 tttggattagcttattttagagcttatataaaacagcttatgcaaataaat-gagttttcatgtattatttataagttttt-aagatagtttatgaaaaa 4808637  T
Q  235 acagcttatgaagatacaattttcgtta 262  Q
    |||| ||||||||||||||| |||||||    
T  4808638 acagtttatgaagatacaatattcgtta 4808665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 10184448 - 10184322
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 234  Q
    |||||||||  ||||| || ||||||||  ||||  ||||||| |||||||||   |||||| || |||| |||||||  | ||||||||||||||||||    
T  10184448 gtttggattagcttattttagagcttatataaaacagcttatgtaaataaataagtttttatctattatttataagttttt-aaggtagtttatgaaaaa 10184350  T
Q  235 acagcttatgaagatacaattttcgtta 262  Q
    |||  ||||||||| |||||||||||||    
T  10184349 acaatttatgaagaaacaattttcgtta 10184322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 141 - 253
Target Start/End: Original strand, 10619202 - 10619312
Alignment:
Q  141 attgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagct 240  Q
    |||||||||| || ||||||||| |||   ||||||||||||||||  |  || ||||| ||||  |||||| || ||||||||||||||||||||| ||    
T  10619202 attgacttattttagagcttatgtaaagcagcttatgcaaataaatgca--ttaatgtattatttgtaagtttgttaaggtagtttatgaaaaaacaact 10619299  T
Q  241 tatgaagatacaa 253  Q
    |||||| ||||||    
T  10619300 tatgaatatacaa 10619312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 201 - 258
Target Start/End: Original strand, 13429488 - 13429545
Alignment:
Q  201 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttc 258  Q
    |||||||||| | ||||| ||||||||||||||||||| |||||| ||||||||||||    
T  13429488 tattcataagcttgtcaaagtagtttatgaaaaaacagtttatgaggatacaattttc 13429545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 6958649 - 6958725
Alignment:
Q  193 ttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaa 269  Q
    |||||||  ||||||||| |  |||||||||||| ||||||| |||||| |||||||||||||||| ||| ||||||    
T  6958649 ttatgtatcattcataagcttctcaaggtagtttgtgaaaaagcagcttgtgaagatacaattttctttagtgagaa 6958725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 262
Target Start/End: Original strand, 1468140 - 1468268
Alignment:
Q  132 cccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 231  Q
    |||||||| |||  ||||| || ||||||||  ||||  |||||||||||||||||   ||||||||| |||| ||| |||  | ||||||||||||| |    
T  1468140 cccgtttgaattagcttattttagagcttatataaaatagcttatgcaaataaataagtttttatgtattatttataggtt-tttaaggtagtttatg-a 1468237  T
Q  232 aaaacagcttatgaagatacaattttcgtta 262  Q
    ||||||| ||||||||| || ||||||||||    
T  1468238 aaaacagtttatgaagaaaccattttcgtta 1468268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 271
Target Start/End: Original strand, 4272387 - 4272485
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||||||||   ||||||||| ||| ||||||||  | || ||||||||| ||||||||  |||| |||| ||||||||||||| ||| ||||    
T  4272387 ttatgcaaataaataactttttatgtattatacataagtttataaatgtagtttataaaaaaacaatttataaagaaacaattttcgttaatgaaaact 4272485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 262
Target Start/End: Complemental strand, 8011173 - 8011036
Alignment:
Q  127 tagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttt 226  Q
    ||||| |||||||||||| ||||| || ||||||||| | |   ||| ||| |||||||||  | || || || |||| ||||||| |||||||||||||    
T  8011173 tagggtccgtttggattggcttattttagagcttatgtacagtagctaatgaaaataaataagcattaatatattatttataagtttgtcaaggtagttt 8011074  T
Q  227 atg--aaaaaacagcttatgaagatacaattttcgtta 262  Q
     ||  |||||| | |||||||| |||||||||||||||    
T  8011073 ttgaaaaaaaaaaacttatgaatatacaattttcgtta 8011036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 257
Target Start/End: Complemental strand, 9202438 - 9202396
Alignment:
Q  215 tcaaggtagtttatgaaaaaacagcttatgaagatacaatttt 257  Q
    |||||| |||||||||||||||||| |||||||||||||||||    
T  9202438 tcaaggcagtttatgaaaaaacagcatatgaagatacaatttt 9202396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 271
Target Start/End: Original strand, 23239212 - 23239350
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 232  Q
    ||||||||||||| ||   |||||||||||| ||||   ||||| ||||||||||  ||||||| || |||||||||| | || || || |||||| |||    
T  23239212 ccgtttggattgagtttattttgagcttatgaaaaataacttatacaaataaataagcttttatttattattcataagcttgttaacgtggtttatcaaa 23239311  T
Q  233 aaacagcttatgaagatacaattttcgttattgagaact 271  Q
    || ||  |||||| ||||||| |||| ||| ||||||||    
T  23239312 aagcaaattatgacgatacaactttccttagtgagaact 23239350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 257
Target Start/End: Original strand, 34413331 - 34413408
Alignment:
Q  179 aaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaatttt 257  Q
    ||||||||||| ||||||||| |||| ||||||| || || ||||||||||||||||||  |||| || ||||||||||    
T  34413331 aaataaataga-ttttatgtattatttataagtttgtaaatgtagtttatgaaaaaacaatttataaacatacaatttt 34413408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 175 - 271
Target Start/End: Complemental strand, 991362 - 991265
Alignment:
Q  175 atgcaaataaatagacttttatgtactattc-ataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||| ||||||  |||||||||| ||||  ||||||| ||||||  |||||||| |||||||  | |||||||||||||||||| || ||||||||    
T  991362 atgcaagtaaataagcttttatgtaatattagataagtttgtcaagtcagtttatggaaaaacaattgatgaagatacaattttcgataatgagaact 991265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 11795524 - 11795577
Alignment:
Q  132 cccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaa 185  Q
    ||||||||||||||||||| | |||||||||||||||  | |||||||||||||    
T  11795524 cccgtttggattgacttatttctgagcttatgcaaaacagattatgcaaataaa 11795577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 12816805 - 12816874
Alignment:
Q  129 gggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    ||||| ||||||||| |||||| |||||||||||| ||||  | |||||||||||||||  |||||||||    
T  12816805 gggcctgtttggattaacttatttttgagcttatgaaaaatagtttatgcaaataaataagcttttatgt 12816874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 34509934 - 34509999
Alignment:
Q  190 cttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaatt 255  Q
    |||||||||| |||||||||||| ||||| | ||||||||| |||| || ||||||||||| ||||    
T  34509934 cttttatgtattattcataagtttgtcaatggagtttatgataaaagagtttatgaagatataatt 34509999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 133 - 210
Target Start/End: Complemental strand, 35111456 - 35111379
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataag 210  Q
    |||||||||||| || || ||| |||||||||||||  ||||||||||||||| |  |||||| ||| ||||||||||    
T  35111456 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 35111379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 18078297 - 18078238
Alignment:
Q  203 ttcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    |||||||||| ||||| ||| ||||||||||||||| |||| |||||| |||||| ||||    
T  18078297 ttcataagtttgtcaatgtattttatgaaaaaacagtttataaagatataatttttgtta 18078238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 198
Target Start/End: Original strand, 35071338 - 35071401
Alignment:
Q  135 gtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    |||||||||| ||||| ||| |||||||| ||||  |||||||||||||||||  |||||||||    
T  35071338 gtttggattggcttattttttagcttatgaaaaatagcttatgcaaataaataagcttttatgt 35071401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 153 - 231
Target Start/End: Complemental strand, 2040287 - 2040209
Alignment:
Q  153 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 231  Q
    ||||||||||||||||   |||||  |||||||||  ||||||| || |||||||||||| || |||||| ||||||||    
T  2040287 ttgagcttatgcaaaacaacttatataaataaataagcttttatttattattcataagtttgttaaggtaatttatgaa 2040209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 136 - 198
Target Start/End: Original strand, 10755194 - 10755256
Alignment:
Q  136 tttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    ||||||||||||||| ||||||||| || ||||  | |||||||||||||||  |||||||||    
T  10755194 tttggattgacttatttttgagcttctgaaaaatagtttatgcaaataaataagcttttatgt 10755256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 12817174 - 12817116
Alignment:
Q  172 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatga 230  Q
    ||||||||||||||||  |||| ||||| |||||||||| | ||||| |||||||||||    
T  12817174 cttatgcaaataaataagctttaatgtattattcataagctagtcaatgtagtttatga 12817116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 133 - 198
Target Start/End: Original strand, 21025127 - 21025192
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaat-gcttatgcaaataaatagacttttatgt 198  Q
    ||||||||||||| |||| ||| ||||||| ||||||| |||||||||||||||||  |||||||||    
T  21025127 ccgtttggattgatttattttttagcttat-caaaaatagcttatgcaaataaataagcttttatgt 21025192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 271
Target Start/End: Complemental strand, 22816666 - 22816568
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||||||||   ||||||||| ||||||||||||  | ||  || ||||||||||||||| |||| |  ||||||||| ||||| ||| ||||    
T  22816666 ttatgcaaataaataagtttttatgtaatattcataagtttttaaatataatttatgaaaaaacagtttataagtatacaatttccgttaatgataact 22816568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 2027089 - 2027149
Alignment:
Q  137 ttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    |||||||||||||| ||| |||||||| ||||  ||||||||||||| ||| ||||||||||    
T  2027089 ttggattgacttattttt-agcttatgaaaaatagcttatgcaaatagataaacttttatgt 2027149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 6752809 - 6752861
Alignment:
Q  158 cttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataag 210  Q
    |||||||||||| ||||||| ||||||||| | |||||| || ||||||||||    
T  6752809 cttatgcaaaaaagcttatgtaaataaataaatttttatttattattcataag 6752861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 15054633 - 15054577
Alignment:
Q  206 ataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    ||||||| || || ||| ||||||||||| ||  |||||||||||||||||||||||    
T  15054633 ataagtttgtaaaagtattttatgaaaaagcaatttatgaagatacaattttcgtta 15054577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 20776528 - 20776468
Alignment:
Q  137 ttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatg 197  Q
    |||||||| ||||| ||||||| |||| ||||   |||||||||||||||| |||||||||    
T  20776528 ttggattggcttatttttgagcatatgaaaaataacttatgcaaataaataaacttttatg 20776468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 60; Significance: 3e-25; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 97314 - 97192
Alignment:
Q  146 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 245  Q
    ||||| ||| ||||| || ||||  |||||||||||||||||  || ||||||| |||||||||| | ||||||||||||||||||||||||||||||      
T  97314 cttattttttagcttgtgtaaaatagcttatgcaaataaataagctattatgtagtattcataagctagtcaaggtagtttatgaaaaaacagcttat-- 97217  T
Q  246 agatacaattttcgttattgagaact 271  Q
     |||||||||||||||| ||||||||    
T  97216 -gatacaattttcgttagtgagaact 97192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 125 - 194
Target Start/End: Original strand, 97106 - 97175
Alignment:
Q  125 tttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagactttt 194  Q
    |||||||| ||||||||||||||||| ||||||||| |||||||  ||| ||||||||||| || |||||    
T  97106 tttagggctcgtttggattgacttatttttgagcttttgcaaaacagctaatgcaaataaaaaggctttt 97175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 126 - 271
Target Start/End: Original strand, 24704 - 24850
Alignment:
Q  126 ttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaa--ggtag 223  Q
    |||||||| ||||||||||  |||| ||  |||||| ||||||  |||||||||||||||||  |||||||||| |||||||||| | |||||  |||||    
T  24704 ttagggcctgtttggattgg-ttattttatagcttaagcaaaacagcttatgcaaataaataagcttttatgtattattcataagcttgtcaaaaggtag 24802  T
Q  224 tttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||||||||||| || |||||||||| ||| ||| ||||||||    
T  24803 tttatgaaaaaacagctaatcaagatacaatattcattagtgagaact 24850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 24925 - 24871
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaata 187  Q
    |||||||||||| ||||| |||||||||||| |||   |||||||||||||||||    
T  24925 ccgtttggattgtcttatttttgagcttatgaaaagtagcttatgcaaataaata 24871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 152 - 271
Target Start/End: Complemental strand, 58970 - 58851
Alignment:
Q  152 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 251  Q
    ||||||||||||||||||  ||| || ||||||||| || |||||||| ||||| |||||| ||||| |||||||||||||||  |  ||||||||||||    
T  58970 tttgagcttatgcaaaaaaccttgtggaaataaataaacgtttatgtattattcttaagtttgtcaatgtagtttatgaaaaagtattttatgaagatac 58871  T
Q  252 aattttcgttattgagaact 271  Q
    ||||| ||||| ||| ||||    
T  58870 aatttccgttagtgaaaact 58851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 128 - 262
Target Start/End: Original strand, 178460 - 178595
Alignment:
Q  128 agggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 227  Q
    |||| ||||||||||| |||||| ||||| ||||| | |||   ||||||||||||||||  |||||||||| |||| |||||||  | |||||| ||||    
T  178460 agggtccgtttggattaacttatttttgaacttatactaaacaacttatgcaaataaataagcttttatgtattatttataagtttcttaaggtatttta 178559  T
Q  228 tg-aaaaaacagcttatgaagatacaattttcgtta 262  Q
    || |||||| || |||||||||||||||||||||||    
T  178560 tgaaaaaaatagtttatgaagatacaattttcgtta 178595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 14829 - 14729
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaac 270  Q
    |||||| ||||||||||  |||||||||| ||||||||||||  | || ||||||||||||||| ||| |||| || ||||||||||||||| |||||||    
T  14829 gcttatacaaataaataagcttttatgtattattcataagtttttaaatgtagtttatgaaaaatcagtttataaatatacaattttcgttagtgagaac 14730  T
Q  271 t 271  Q
    |    
T  14729 t 14729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 14937 - 14848
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa-cagcttatgaagatacaattttcg 259  Q
    |||||| | ||||||||  ||||||||||  |||||||||||  | || |||||| ||||||||| ||| |||| |||||||||||||||    
T  14937 gcttatacgaataaataagcttttatgtatcattcataagtttttaaatgtagttaatgaaaaaatcagtttataaagatacaattttcg 14848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 49; Significance: 1e-18; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 24496 - 24381
Alignment:
Q  146 cttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 245  Q
    |||| |||||||||| | |||||  |||||||||||||||||| ||| |||||| |||||||||| | |||||||||||| || ||| |||| |||| ||    
T  24496 cttacctttgagcttctacaaaacagcttatgcaaataaatag-cttgtatgtattattcataagcttgtcaaggtagttgataaaataacaacttacga 24398  T
Q  246 agatacaattttcgtta 262  Q
    ||||| |||||||||||    
T  24397 agatataattttcgtta 24381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 43918 - 43835
Alignment:
Q  152 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa 235  Q
    ||||||||||| |||||  || ||||||||||||||   ||||||||| |||||| ||| | ||| ||||||||||| ||||||    
T  43918 tttgagcttatacaaaacagcatatgcaaataaataagtttttatgtattattcaaaagcttgtcgaggtagtttataaaaaaa 43835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 24293 - 24361
Alignment:
Q  130 ggcccgtttggattgacttatcttt-gagcttatgcaaaaatgcttatgcaaataaatagacttttatg 197  Q
    |||||||||| |||||||||| ||| ||||||||| |||   | |||||||||||||||| ||||||||    
T  24293 ggcccgtttgcattgacttattttttgagcttatgaaaagtagtttatgcaaataaataggcttttatg 24361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 262
Target Start/End: Original strand, 227709 - 227801
Alignment:
Q  171 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg-aaaaaacagcttatgaagatacaattttcgtta 262  Q
    |||||||| ||||||||  | || ||||| |||| ||||||| || ||||||||||||| ||||||||||||||||| |||||||||||||||    
T  227709 gcttatgcgaataaataagcattaatgtagtatttataagtttgttaaggtagtttatgaaaaaaacagcttatgaatatacaattttcgtta 227801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 242768 - 242632
Alignment:
Q  125 tttagggcccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 224  Q
    |||||||||||||||||||  ||||| ||  |||||||  ||||  | |||||||||||||||   ||||||||| |||  |||||||  ||||| || |    
T  242768 tttagggcccgtttggattagcttattttatagcttatataaaatagtttatgcaaataaataagtttttatgtattatatataagttt-tcaagctatt 242670  T
Q  225 ttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    ||||| |||||||| |||||||||||| ||||||||||    
T  242669 ttatggaaaaacaggttatgaagatacgattttcgtta 242632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 109073 - 108986
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    |||||||||||||||  | |||||||| || ||||||| | |||||||| ||||||||||||  | ||||||||||||||||||||||||    
T  109073 ttatgcaaataaataagcctttatgtattactcataagcttgtcaaggtggtttatgaaaaa--aacttatgaagatacaattttcgtta 108986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1088 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1088
Description:

Target: scaffold1088; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 262
Target Start/End: Original strand, 1267 - 1388
Alignment:
Q  141 attgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagct 240  Q
    |||||||||| || ||||||||||||||   ||||||||||| ||||    || || || |||| ||||||| || |||||||||||||||||||||  |    
T  1267 attgacttattttagagcttatgcaaaacaacttatgcaaatgaataaggattaatatattatttataagtttgttaaggtagtttatgaaaaaacaagt 1366  T
Q  241 tatgaagatacaattttcgtta 262  Q
    ||| || |||||||||||||||    
T  1367 tataaatatacaattttcgtta 1388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 271
Target Start/End: Original strand, 1062 - 1161
Alignment:
Q  172 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||||||||||  ||||||| || ||| |||||| | || |||||| |||||| ||||| | ||||||||||||||| |||| ||| ||||||||    
T  1062 cttatgcaaataaataagcttttatttattatccataagattgttaaggtaatttatggaaaaataacttatgaagatacaaatttcattagtgagaact 1161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 133 - 198
Target Start/End: Original strand, 48536 - 48601
Alignment:
Q  133 ccgtttggattgacttatctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 198  Q
    |||||| ||||||||||| ||| ||||||| |||||  |||||||||||||||||  |||||||||    
T  48536 ccgttttgattgacttattttttagcttatacaaaatagcttatgcaaataaataagcttttatgt 48601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 179 - 271
Target Start/End: Original strand, 4076 - 4167
Alignment:
Q  179 aaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    |||||||||  |||| ||||| |||| ||||| | || ||| ||||||||||||||| |||||||| | ||||||||||||||| || |||||    
T  4076 aaataaataagctttaatgtattatttataagcttgtaaagatagtttatgaaaaaatagcttatgta-atacaattttcgttagtgggaact 4167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 172 - 268
Target Start/End: Complemental strand, 279073 - 278978
Alignment:
Q  172 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgaga 268  Q
    |||||||||||| ||| | ||||||||| |||| |||||||  | ||||||||||||||||||||   |||| ||||||||| ||| |||| |||||    
T  279073 cttatgcaaatacataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccatttataaagatacaaattttgttagtgaga 278978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 271
Target Start/End: Complemental strand, 11382 - 11283
Alignment:
Q  172 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttattgagaact 271  Q
    ||||||||||||||||  ||||||| || ||| ||| || | || |||||| |||||| ||||| | ||||||||||||||  |||| ||| ||||||||    
T  11382 cttatgcaaataaataagcttttatttattatccattagcttgttaaggtaatttatggaaaaataacttatgaagatacatatttcattagtgagaact 11283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 38533 - 38445
Alignment:
Q  173 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtta 262  Q
    |||||||||||||||   ||||||||| |||| |||| ||  ||||| || |||||| |||||||| |||||||||| | ||||||||||    
T  38533 ttatgcaaataaataagtttttatgtattatttataaatt-ttcaagctattttatggaaaaacaggttatgaagatgcgattttcgtta 38445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 18099 - 18135
Alignment:
Q  130 ggcccgtttggattgacttatctttgagcttatgcaa 166  Q
    |||||| |||||||||||||| |||||||||||||||    
T  18099 ggcccgattggattgacttatttttgagcttatgcaa 18135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University