View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8511_low_53 (Length: 346)
Name: NF8511_low_53
Description: NF8511
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8511_low_53 |
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Alignment Details
Target: chr4 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 26689275 - 26688950
Alignment:
| Q |
1 |
agagagttagaagagactaataagaaagaagacaacagaagggtccagttacagctgggaagcaacaatcaatcacaaaatgcatcatagtatttgaaaa |
100 |
Q |
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| T |
26689275 |
agagagttagaagagactaataagaaagaagacaacagaagggtccagttacagctgggaagcaacaatcaatcacaaaatgcatcatagtatttgaaaa |
26689176 |
T |
|
| Q |
101 |
tacttccaaatagtttcactttcacagaacaggattatttgggggtaagcctgttgtgttcagatcattgtatattattggttagtctctcttgtgagtc |
200 |
Q |
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| T |
26689175 |
tacttccaaatagtttcactttcacagaacaggattatttgggggtaagcctgttgtgttcagatgattgtatattattggttagtctctcttgtgagtc |
26689076 |
T |
|
| Q |
201 |
aagagattcttttaaactttgggtggaattttgaannnnnnnacttagtttaaactgtaaattaaatgaatgagtaaactcccaatttagtctctcatag |
300 |
Q |
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| T |
26689075 |
aagagattcttttaaactttgggtggaattttgaa-ttttttacttagtttaaactgtaaataaaatgaatgagtaaactccaaatttaatctctcatag |
26688977 |
T |
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| Q |
301 |
ataaaattcgattaagagagaaaaacc |
327 |
Q |
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| T |
26688976 |
agaaaattcgattaagagagaaaaacc |
26688950 |
T |
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