View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8511_low_69 (Length: 291)
Name: NF8511_low_69
Description: NF8511
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8511_low_69 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 16 - 291
Target Start/End: Original strand, 6067971 - 6068246
Alignment:
| Q |
16 |
atgaaggaatactataacaaaaagttaaaccttgtgttgaagaagcttaagtatacttgtatttagtcctgttgaaaaagacttcaatggattagcctta |
115 |
Q |
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| T |
6067971 |
atgaaggaatactataacaaaaagttaaaccttgtgttgaagaagcttaagtatacttgtatttagtcctgttgaaaaagacttcaatggattagcctta |
6068070 |
T |
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| Q |
116 |
tgcattctaagaaaatgtataaaagataaagaaatgtttagtcttctaggatacaaagtaatcagaggcatctaatgtaaaacacatttgtatgcacaaa |
215 |
Q |
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| T |
6068071 |
tgcattctaagaaaatgcataaaagataaagaaatgtttagtcttctaggatacaaagtaatcagagacatctaatgtaaaacacatttgtatgcacaaa |
6068170 |
T |
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| Q |
216 |
attagtcaaaagacccgcggcaaatacatataattgagtcccttaagcatggaaaatttcttgctggaaaaggaaa |
291 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |
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| T |
6068171 |
attagtcaaaagacccgcggcaaatacatataattgagtcccttaagcatggaaaatttcttgttggaataggaaa |
6068246 |
T |
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