View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8511_low_7 (Length: 596)

Name: NF8511_low_7
Description: NF8511
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8511_low_7
NF8511_low_7
[»] chr2 (72 HSPs)
chr2 (17-579)||(4192315-4192880)
chr2 (373-579)||(32913077-32913283)
chr2 (360-579)||(34598809-34599029)
chr2 (370-577)||(45128037-45128244)
chr2 (373-565)||(21570460-21570654)
chr2 (373-579)||(40626067-40626273)
chr2 (359-579)||(8971666-8971888)
chr2 (370-579)||(2808511-2808719)
chr2 (359-579)||(40659971-40660188)
chr2 (411-579)||(3270268-3270436)
chr2 (411-579)||(3725054-3725222)
chr2 (360-579)||(6173454-6173674)
chr2 (373-579)||(27249190-27249397)
chr2 (411-579)||(30420550-30420720)
chr2 (359-579)||(9986381-9986607)
chr2 (417-579)||(7015750-7015912)
chr2 (374-559)||(32680640-32680826)
chr2 (373-579)||(36233840-36234050)
chr2 (373-579)||(27476990-27477190)
chr2 (417-579)||(4228011-4228175)
chr2 (373-579)||(26025449-26025652)
chr2 (370-579)||(20047121-20047330)
chr2 (442-577)||(41430932-41431068)
chr2 (359-562)||(41712821-41713025)
chr2 (461-579)||(22421659-22421777)
chr2 (378-577)||(25086874-25087077)
chr2 (452-579)||(8805781-8805908)
chr2 (384-579)||(459313-459509)
chr2 (427-579)||(32197834-32197986)
chr2 (411-567)||(39641909-39642067)
chr2 (373-575)||(17319161-17319360)
chr2 (420-579)||(27949306-27949468)
chr2 (480-579)||(3269150-3269251)
chr2 (480-579)||(3269709-3269810)
chr2 (452-528)||(31581810-31581886)
chr2 (388-567)||(9374607-9374780)
chr2 (429-514)||(42949605-42949691)
chr2 (416-500)||(18694925-18695010)
chr2 (417-493)||(24587593-24587669)
chr2 (416-579)||(8308051-8308213)
chr2 (521-576)||(31580631-31580686)
chr2 (411-568)||(37876686-37876846)
chr2 (420-579)||(10237292-10237452)
chr2 (419-507)||(38293427-38293514)
chr2 (419-514)||(9418303-9418397)
chr2 (411-579)||(12647992-12648172)
chr2 (411-521)||(24461290-24461400)
chr2 (419-500)||(30923593-30923672)
chr2 (411-500)||(3308790-3308881)
chr2 (442-526)||(36323761-36323847)
chr2 (416-518)||(43397260-43397362)
chr2 (360-478)||(33229129-33229247)
chr2 (419-579)||(37614164-37614325)
chr2 (426-518)||(14955389-14955482)
chr2 (411-497)||(32448782-32448869)
chr2 (416-504)||(30400190-30400282)
chr2 (420-517)||(39285398-39285496)
chr2 (516-566)||(39310934-39310984)
chr2 (511-568)||(18763431-18763488)
chr2 (460-504)||(23933774-23933818)
chr2 (425-488)||(13141352-13141415)
chr2 (472-518)||(4904285-4904330)
chr2 (416-462)||(14423149-14423195)
chr2 (411-568)||(7448099-7448267)
chr2 (457-514)||(23903311-23903368)
chr2 (470-562)||(10248080-10248171)
chr2 (472-504)||(19596029-19596061)
chr2 (472-504)||(28227838-28227870)
chr2 (472-504)||(29279723-29279755)
chr2 (472-504)||(29574786-29574818)
chr2 (472-504)||(31128932-31128964)
chr2 (472-504)||(31788371-31788403)
[»] chr4 (84 HSPs)
chr4 (342-579)||(37188633-37188869)
chr4 (360-579)||(10389793-10390012)
chr4 (379-579)||(51317834-51318035)
chr4 (360-579)||(43444223-43444443)
chr4 (370-579)||(10359586-10359796)
chr4 (373-579)||(21089995-21090202)
chr4 (360-579)||(25273705-25273933)
chr4 (378-576)||(38706752-38706951)
chr4 (360-577)||(56194426-56194649)
chr4 (378-564)||(34024491-34024677)
chr4 (360-579)||(53616689-53616910)
chr4 (373-579)||(9528916-9529124)
chr4 (370-579)||(31381711-31381920)
chr4 (373-579)||(2115627-2115834)
chr4 (360-579)||(867987-868212)
chr4 (373-579)||(4643699-4643908)
chr4 (360-579)||(9645588-9645808)
chr4 (452-579)||(8009400-8009526)
chr4 (373-579)||(1531749-1531958)
chr4 (360-577)||(6972640-6972858)
chr4 (380-579)||(35965014-35965214)
chr4 (373-579)||(9283754-9283961)
chr4 (416-579)||(20569138-20569305)
chr4 (378-579)||(35261036-35261241)
chr4 (373-579)||(43154053-43154266)
chr4 (401-579)||(18138952-18139131)
chr4 (401-579)||(49126165-49126344)
chr4 (360-579)||(2624327-2624546)
chr4 (416-579)||(50766551-50766712)
chr4 (461-579)||(29965565-29965685)
chr4 (420-579)||(12265345-12265504)
chr4 (456-579)||(14183729-14183852)
chr4 (452-579)||(49680459-49680591)
chr4 (452-579)||(32952788-32952913)
chr4 (373-579)||(44947246-44947462)
chr4 (373-564)||(1931770-1931949)
chr4 (382-526)||(47416736-47416881)
chr4 (420-579)||(46991169-46991329)
chr4 (360-524)||(1008124-1008289)
chr4 (420-494)||(5333584-5333658)
chr4 (471-568)||(3336207-3336304)
chr4 (360-494)||(5333656-5333787)
chr4 (360-518)||(49072858-49073018)
chr4 (379-567)||(27593878-27594076)
chr4 (442-528)||(35351251-35351337)
chr4 (425-579)||(27651823-27651978)
chr4 (432-526)||(21554901-21554995)
chr4 (364-457)||(50179605-50179698)
chr4 (416-504)||(36161580-36161668)
chr4 (427-579)||(36194590-36194743)
chr4 (419-514)||(41255485-41255579)
chr4 (524-579)||(47417657-47417712)
chr4 (416-466)||(3338816-3338866)
chr4 (416-502)||(9165196-9165286)
chr4 (411-504)||(22300706-22300801)
chr4 (421-521)||(36184335-36184437)
chr4 (533-576)||(45228083-45228126)
chr4 (470-504)||(52978747-52978781)
chr4 (416-504)||(9643244-9643337)
chr4 (416-504)||(43510065-43510156)
chr4 (538-579)||(49410232-49410273)
chr4 (414-494)||(52098044-52098125)
chr4 (472-568)||(56040725-56040828)
chr4 (411-502)||(9178218-9178312)
chr4 (417-461)||(29121876-29121920)
chr4 (416-504)||(54021727-54021818)
chr4 (457-500)||(21405440-21405483)
chr4 (454-513)||(23329094-23329153)
chr4 (516-579)||(28857377-28857440)
chr4 (472-518)||(9713832-9713877)
chr4 (470-504)||(29120515-29120549)
chr4 (416-568)||(32766380-32766544)
chr4 (472-514)||(43095555-43095597)
chr4 (472-502)||(52944236-52944266)
chr4 (473-518)||(4937757-4937801)
chr4 (411-448)||(10496203-10496240)
chr4 (457-514)||(21365201-21365258)
chr4 (411-518)||(26633810-26633918)
chr4 (472-504)||(5119264-5119296)
chr4 (472-504)||(9634599-9634631)
chr4 (547-579)||(22300855-22300887)
chr4 (472-504)||(24099222-24099254)
chr4 (472-504)||(29961077-29961109)
chr4 (547-579)||(47320462-47320494)
[»] chr1 (71 HSPs)
chr1 (360-567)||(14545342-14545549)
chr1 (370-577)||(51871697-51871903)
chr1 (416-579)||(28035017-28035181)
chr1 (361-577)||(51868686-51868903)
chr1 (376-579)||(40881051-40881256)
chr1 (376-565)||(30818399-30818588)
chr1 (373-579)||(35584657-35584867)
chr1 (373-579)||(33291457-33291665)
chr1 (359-577)||(7342543-7342762)
chr1 (370-579)||(5324597-5324806)
chr1 (416-579)||(27872617-27872780)
chr1 (376-579)||(11453773-11453977)
chr1 (416-579)||(20266180-20266344)
chr1 (411-579)||(7997660-7997831)
chr1 (361-577)||(25406325-25406542)
chr1 (416-560)||(38520592-38520736)
chr1 (378-575)||(18569353-18569551)
chr1 (360-577)||(50166140-50166357)
chr1 (359-579)||(5701078-5701301)
chr1 (380-579)||(19723176-19723375)
chr1 (373-579)||(45426105-45426309)
chr1 (360-540)||(40646510-40646692)
chr1 (416-577)||(9172366-9172530)
chr1 (416-577)||(9180348-9180512)
chr1 (416-579)||(3871286-3871450)
chr1 (459-579)||(34519054-34519174)
chr1 (416-579)||(50272179-50272343)
chr1 (411-567)||(30878948-30879106)
chr1 (452-577)||(9919303-9919429)
chr1 (362-552)||(50148196-50148389)
chr1 (419-565)||(7312153-7312298)
chr1 (416-579)||(19715934-19716099)
chr1 (416-514)||(25728064-25728162)
chr1 (477-579)||(31836745-31836849)
chr1 (416-577)||(44637300-44637461)
chr1 (416-576)||(41081746-41081908)
chr1 (373-579)||(39987220-39987431)
chr1 (476-579)||(9687243-9687356)
chr1 (379-579)||(39927593-39927793)
chr1 (416-506)||(45805922-45806012)
chr1 (431-538)||(30558736-30558842)
chr1 (431-568)||(51916740-51916880)
chr1 (416-579)||(48365804-48365954)
chr1 (411-572)||(34878353-34878519)
chr1 (432-503)||(26535260-26535333)
chr1 (416-518)||(1742130-1742233)
chr1 (431-518)||(15492157-15492243)
chr1 (411-504)||(49626754-49626849)
chr1 (492-567)||(7836876-7836951)
chr1 (420-514)||(18649987-18650082)
chr1 (425-579)||(48750048-48750202)
chr1 (420-500)||(16161685-16161767)
chr1 (416-498)||(34528568-34528650)
chr1 (414-504)||(12635014-12635106)
chr1 (420-518)||(23291782-23291881)
chr1 (523-559)||(45805875-45805911)
chr1 (463-526)||(15397328-15397391)
chr1 (417-499)||(45789415-45789498)
chr1 (416-526)||(19052426-19052535)
chr1 (482-526)||(4396914-4396959)
chr1 (420-500)||(34413247-34413330)
chr1 (472-504)||(568936-568968)
chr1 (516-568)||(5983797-5983849)
chr1 (547-579)||(12635159-12635191)
chr1 (412-464)||(14872484-14872536)
chr1 (547-579)||(16161823-16161855)
chr1 (474-518)||(31918899-31918942)
chr1 (547-579)||(34413165-34413197)
chr1 (547-579)||(34528719-34528751)
chr1 (547-579)||(36775785-36775817)
chr1 (547-579)||(49626903-49626935)
[»] chr6 (42 HSPs)
chr6 (360-579)||(23947357-23947576)
chr6 (352-568)||(17237335-17237551)
chr6 (360-579)||(25064053-25064274)
chr6 (373-579)||(12652771-12652982)
chr6 (373-579)||(4984606-4984823)
chr6 (360-577)||(16418977-16419194)
chr6 (370-575)||(12165669-12165874)
chr6 (416-579)||(8196446-8196610)
chr6 (411-576)||(33740620-33740786)
chr6 (411-579)||(7876083-7876253)
chr6 (373-579)||(8496796-8497005)
chr6 (360-534)||(33109652-33109826)
chr6 (360-579)||(8028157-8028377)
chr6 (420-579)||(4468437-4468596)
chr6 (411-579)||(4088328-4088498)
chr6 (416-577)||(10228553-10228715)
chr6 (411-579)||(7881141-7881311)
chr6 (372-579)||(17334606-17334816)
chr6 (388-579)||(33543659-33543851)
chr6 (411-579)||(34489117-34489288)
chr6 (458-577)||(35001506-35001626)
chr6 (420-579)||(28635160-28635321)
chr6 (471-579)||(25337499-25337608)
chr6 (506-579)||(7027799-7027872)
chr6 (427-512)||(25398451-25398536)
chr6 (417-483)||(3108443-3108508)
chr6 (452-514)||(5582757-5582819)
chr6 (416-506)||(9508829-9508918)
chr6 (460-525)||(13436705-13436770)
chr6 (538-579)||(33110608-33110649)
chr6 (442-494)||(8266535-8266587)
chr6 (411-500)||(1523250-1523339)
chr6 (431-579)||(4352035-4352189)
chr6 (472-579)||(28981082-28981196)
chr6 (516-568)||(32327296-32327348)
chr6 (472-518)||(11321608-11321653)
chr6 (425-579)||(26588543-26588700)
chr6 (416-504)||(30493380-30493467)
chr6 (417-504)||(30608666-30608754)
chr6 (430-500)||(545885-545957)
chr6 (428-506)||(31575645-31575721)
chr6 (547-579)||(22571461-22571493)
[»] chr3 (67 HSPs)
chr3 (360-579)||(29503277-29503497)
chr3 (370-579)||(46934468-46934677)
chr3 (373-576)||(4172395-4172599)
chr3 (373-576)||(4178393-4178597)
chr3 (373-576)||(25631568-25631773)
chr3 (373-579)||(25162265-25162471)
chr3 (370-579)||(36905947-36906157)
chr3 (373-579)||(39917436-39917642)
chr3 (416-579)||(49552263-49552426)
chr3 (416-579)||(17237674-17237840)
chr3 (417-568)||(50611467-50611619)
chr3 (416-562)||(38440634-38440780)
chr3 (373-567)||(44907449-44907645)
chr3 (360-576)||(38855078-38855295)
chr3 (370-579)||(35499237-35499451)
chr3 (360-579)||(32607283-32607504)
chr3 (411-579)||(2342359-2342527)
chr3 (373-579)||(51202293-51202495)
chr3 (420-579)||(22802897-22803057)
chr3 (373-579)||(12115922-12116133)
chr3 (434-579)||(42719410-42719552)
chr3 (416-576)||(14464379-14464542)
chr3 (416-577)||(46178448-46178610)
chr3 (478-577)||(30648760-30648860)
chr3 (416-514)||(3850560-3850658)
chr3 (411-579)||(37169097-37169266)
chr3 (426-506)||(21487993-21488073)
chr3 (382-494)||(36735277-36735389)
chr3 (518-577)||(3848960-3849019)
chr3 (359-573)||(47980708-47980927)
chr3 (359-573)||(47989995-47990214)
chr3 (359-573)||(47999282-47999501)
chr3 (359-573)||(48008569-48008788)
chr3 (378-517)||(25849654-25849793)
chr3 (416-518)||(33579714-33579817)
chr3 (420-494)||(16235269-16235344)
chr3 (454-516)||(6913249-6913311)
chr3 (509-579)||(36734731-36734801)
chr3 (430-513)||(53508081-53508166)
chr3 (461-579)||(31793996-31794106)
chr3 (519-579)||(6910742-6910802)
chr3 (531-579)||(21488078-21488126)
chr3 (425-504)||(29249099-29249179)
chr3 (411-518)||(47042191-47042300)
chr3 (421-500)||(3606637-3606716)
chr3 (420-504)||(29921903-29921989)
chr3 (420-504)||(29971056-29971142)
chr3 (411-497)||(40487166-40487254)
chr3 (472-579)||(51923634-51923740)
chr3 (439-567)||(54378795-54378923)
chr3 (472-568)||(20608978-20609074)
chr3 (431-518)||(47896012-47896101)
chr3 (431-575)||(1649278-1649433)
chr3 (416-518)||(36461570-36461674)
chr3 (431-568)||(43488669-43488818)
chr3 (420-499)||(53706405-53706484)
chr3 (472-579)||(7546516-7546627)
chr3 (416-504)||(9797681-9797773)
chr3 (431-490)||(38142432-38142493)
chr3 (416-504)||(50194436-50194526)
chr3 (426-579)||(51303718-51303871)
chr3 (431-518)||(52116150-52116238)
chr3 (472-564)||(20465053-20465154)
chr3 (420-500)||(21289977-21290058)
chr3 (547-579)||(12947345-12947377)
chr3 (547-579)||(41818197-41818229)
chr3 (547-579)||(51487091-51487123)
[»] chr7 (72 HSPs)
chr7 (373-579)||(23425411-23425617)
chr7 (372-579)||(45199071-45199278)
chr7 (373-579)||(48207735-48207939)
chr7 (370-576)||(35496217-35496424)
chr7 (387-579)||(35667271-35667463)
chr7 (378-577)||(1485298-1485497)
chr7 (360-579)||(46821832-46822053)
chr7 (360-584)||(26583532-26583757)
chr7 (373-579)||(20116414-20116620)
chr7 (360-577)||(22927911-22928129)
chr7 (387-579)||(42067100-42067292)
chr7 (360-579)||(42311098-42311318)
chr7 (360-579)||(1448869-1449088)
chr7 (359-579)||(26492182-26492403)
chr7 (373-559)||(2843288-2843473)
chr7 (359-567)||(21266209-21266416)
chr7 (360-577)||(23085340-23085557)
chr7 (370-577)||(433732-433939)
chr7 (417-579)||(42408237-42408400)
chr7 (420-579)||(31235831-31235991)
chr7 (419-579)||(46338930-46339092)
chr7 (416-579)||(14627918-14628083)
chr7 (420-579)||(6001899-6002059)
chr7 (481-579)||(17223038-17223136)
chr7 (473-579)||(23786508-23786613)
chr7 (376-525)||(32684519-32684671)
chr7 (373-567)||(17499710-17499892)
chr7 (373-567)||(17553322-17553504)
chr7 (419-561)||(35261174-35261319)
chr7 (379-579)||(32521966-32522170)
chr7 (416-579)||(1100806-1100968)
chr7 (483-564)||(6558817-6558900)
chr7 (450-551)||(36143774-36143875)
chr7 (411-579)||(17611000-17611163)
chr7 (461-537)||(7740559-7740635)
chr7 (411-579)||(1749222-1749389)
chr7 (416-551)||(20083206-20083343)
chr7 (418-528)||(3860828-3860937)
chr7 (473-577)||(7640813-7640928)
chr7 (485-579)||(34773653-34773749)
chr7 (411-579)||(35132794-35132963)
chr7 (472-567)||(24770161-24770257)
chr7 (442-541)||(1575153-1575253)
chr7 (417-568)||(9450216-9450379)
chr7 (360-448)||(12539126-12539214)
chr7 (460-514)||(5546277-5546331)
chr7 (420-504)||(5078547-5078632)
chr7 (411-568)||(37837537-37837706)
chr7 (419-572)||(40993032-40993198)
chr7 (511-579)||(3394426-3394494)
chr7 (411-500)||(24351000-24351091)
chr7 (416-500)||(19404911-19404997)
chr7 (476-514)||(286682-286720)
chr7 (476-526)||(43369858-43369908)
chr7 (458-579)||(46818455-46818577)
chr7 (430-504)||(27996951-27997027)
chr7 (411-500)||(22742781-22742872)
chr7 (417-518)||(45349942-45350044)
chr7 (430-568)||(47590175-47590323)
chr7 (451-514)||(1097708-1097771)
chr7 (411-568)||(12141387-12141556)
chr7 (411-500)||(28476066-28476155)
chr7 (411-504)||(30756971-30757067)
chr7 (545-579)||(32684672-32684706)
chr7 (472-513)||(48930686-48930727)
chr7 (516-568)||(8001625-8001677)
chr7 (481-525)||(8319376-8319420)
chr7 (547-579)||(22742928-22742960)
chr7 (547-579)||(24350912-24350944)
chr7 (547-579)||(28476211-28476243)
chr7 (420-504)||(39228867-39228954)
chr7 (452-500)||(46244391-46244439)
[»] chr5 (70 HSPs)
chr5 (364-568)||(21060332-21060536)
chr5 (370-577)||(19280986-19281193)
chr5 (373-568)||(781223-781418)
chr5 (373-568)||(27266909-27267106)
chr5 (370-579)||(36344530-36344738)
chr5 (360-568)||(7246779-7246988)
chr5 (373-579)||(30371558-30371766)
chr5 (360-568)||(7241603-7241812)
chr5 (387-568)||(16981138-16981319)
chr5 (373-577)||(7150376-7150581)
chr5 (370-579)||(18677504-18677715)
chr5 (387-579)||(35475376-35475568)
chr5 (414-577)||(43148605-43148769)
chr5 (434-579)||(2057877-2058023)
chr5 (381-579)||(28235427-28235625)
chr5 (373-579)||(43261858-43262063)
chr5 (360-564)||(7886992-7887196)
chr5 (417-579)||(26578127-26578292)
chr5 (373-579)||(34881544-34881758)
chr5 (360-558)||(27751735-27751945)
chr5 (461-579)||(30298130-30298248)
chr5 (378-579)||(19259850-19260051)
chr5 (373-579)||(42579711-42579928)
chr5 (360-579)||(41184479-41184703)
chr5 (370-579)||(3271441-3271655)
chr5 (378-514)||(20257799-20257935)
chr5 (421-579)||(15570791-15570950)
chr5 (452-579)||(42886392-42886518)
chr5 (416-579)||(11767684-11767849)
chr5 (411-514)||(10649325-10649428)
chr5 (432-579)||(27576389-27576537)
chr5 (411-526)||(6445808-6445923)
chr5 (414-579)||(7613097-7613270)
chr5 (420-579)||(14211082-14211240)
chr5 (416-526)||(7036073-7036186)
chr5 (416-579)||(28097030-28097193)
chr5 (511-579)||(10649619-10649684)
chr5 (442-517)||(35631792-35631868)
chr5 (416-564)||(11192244-11192392)
chr5 (411-500)||(2979469-2979560)
chr5 (460-526)||(42432821-42432887)
chr5 (411-500)||(39567136-39567227)
chr5 (442-561)||(1696923-1697045)
chr5 (476-569)||(13421850-13421943)
chr5 (470-564)||(14082456-14082556)
chr5 (442-579)||(3166262-3166400)
chr5 (416-468)||(35676227-35676278)
chr5 (452-579)||(1582162-1582288)
chr5 (452-579)||(1602527-1602653)
chr5 (411-568)||(6012217-6012386)
chr5 (460-575)||(19983398-19983516)
chr5 (442-525)||(19100734-19100818)
chr5 (472-565)||(24229866-24229969)
chr5 (411-504)||(38597638-38597733)
chr5 (472-518)||(8096637-8096682)
chr5 (472-518)||(11977076-11977121)
chr5 (454-499)||(9762640-9762685)
chr5 (416-465)||(33029727-33029776)
chr5 (452-528)||(42432170-42432244)
chr5 (472-504)||(4771044-4771076)
chr5 (472-504)||(6216803-6216835)
chr5 (460-504)||(8088365-8088409)
chr5 (471-507)||(10148730-10148766)
chr5 (516-572)||(14726536-14726592)
chr5 (472-504)||(15571390-15571422)
chr5 (419-498)||(24549276-24549356)
chr5 (547-579)||(28540981-28541013)
chr5 (472-500)||(28541069-28541097)
chr5 (411-467)||(31391949-31392005)
chr5 (257-309)||(35774702-35774754)
[»] chr8 (60 HSPs)
chr8 (378-579)||(19876058-19876256)
chr8 (373-579)||(11196730-11196934)
chr8 (416-579)||(35580339-35580502)
chr8 (360-579)||(44099973-44100191)
chr8 (378-576)||(44577879-44578078)
chr8 (407-579)||(34611676-34611849)
chr8 (359-567)||(11725506-11725714)
chr8 (359-577)||(33895906-33896125)
chr8 (363-577)||(9072545-9072761)
chr8 (373-579)||(42448066-42448274)
chr8 (359-579)||(14906962-14907184)
chr8 (416-579)||(2655750-2655915)
chr8 (373-579)||(9619396-9619604)
chr8 (411-579)||(4808840-4809009)
chr8 (373-579)||(9498638-9498847)
chr8 (373-567)||(43890175-43890371)
chr8 (364-584)||(32724515-32724745)
chr8 (378-579)||(33342280-33342482)
chr8 (461-579)||(43192385-43192503)
chr8 (378-579)||(28239675-28239878)
chr8 (361-552)||(17949073-17949265)
chr8 (416-579)||(11464053-11464216)
chr8 (370-567)||(29777064-29777252)
chr8 (420-579)||(37565918-37566079)
chr8 (373-565)||(15597220-15597413)
chr8 (373-567)||(27747164-27747358)
chr8 (427-566)||(16794185-16794324)
chr8 (378-579)||(33298696-33298900)
chr8 (373-579)||(15046730-15046939)
chr8 (431-579)||(36532794-36532942)
chr8 (428-565)||(39153195-39153336)
chr8 (407-568)||(37971131-37971295)
chr8 (420-499)||(18890861-18890942)
chr8 (411-526)||(31013700-31013817)
chr8 (407-489)||(12173375-12173455)
chr8 (407-489)||(12417803-12417883)
chr8 (450-517)||(17427320-17427387)
chr8 (450-517)||(17430970-17431037)
chr8 (420-499)||(41896366-41896444)
chr8 (416-513)||(12184169-12184263)
chr8 (416-513)||(12428597-12428691)
chr8 (427-500)||(24853557-24853630)
chr8 (419-568)||(23230494-23230655)
chr8 (521-579)||(5333391-5333449)
chr8 (509-579)||(8443580-8443650)
chr8 (416-504)||(14545052-14545144)
chr8 (454-515)||(25241706-25241767)
chr8 (472-513)||(26469338-26469379)
chr8 (472-568)||(7883318-7883422)
chr8 (474-521)||(40619206-40619253)
chr8 (452-494)||(18733938-18733980)
chr8 (431-520)||(33214767-33214856)
chr8 (431-513)||(37663215-37663301)
chr8 (472-504)||(3240283-3240315)
chr8 (516-572)||(3673401-3673457)
chr8 (472-512)||(8443663-8443703)
chr8 (472-500)||(14585606-14585634)
chr8 (472-504)||(20559896-20559928)
chr8 (472-504)||(20571458-20571490)
chr8 (470-526)||(39646309-39646365)
[»] scaffold0146 (1 HSPs)
scaffold0146 (416-579)||(16359-16525)
[»] scaffold0311 (1 HSPs)
scaffold0311 (378-553)||(8556-8731)
[»] scaffold0495 (1 HSPs)
scaffold0495 (416-577)||(5272-5434)
[»] scaffold0003 (1 HSPs)
scaffold0003 (360-579)||(361838-362053)
[»] scaffold0014 (1 HSPs)
scaffold0014 (456-579)||(201411-201534)
[»] scaffold0264 (1 HSPs)
scaffold0264 (387-579)||(20435-20624)
[»] scaffold0426 (2 HSPs)
scaffold0426 (359-499)||(6156-6295)
scaffold0426 (530-579)||(6294-6343)
[»] scaffold0002 (1 HSPs)
scaffold0002 (460-579)||(453851-453970)
[»] scaffold0608 (1 HSPs)
scaffold0608 (364-457)||(64-157)
[»] scaffold0022 (1 HSPs)
scaffold0022 (509-579)||(83477-83544)
[»] scaffold0888 (1 HSPs)
scaffold0888 (425-579)||(1753-1908)
[»] scaffold0113 (1 HSPs)
scaffold0113 (452-579)||(36726-36852)
[»] scaffold0603 (1 HSPs)
scaffold0603 (417-504)||(7564-7652)
[»] scaffold0009 (1 HSPs)
scaffold0009 (411-504)||(58232-58327)
[»] scaffold0127 (1 HSPs)
scaffold0127 (411-568)||(15333-15501)
[»] scaffold0049 (1 HSPs)
scaffold0049 (416-504)||(71437-71525)
[»] scaffold0372 (1 HSPs)
scaffold0372 (457-514)||(9725-9782)
[»] scaffold0136 (1 HSPs)
scaffold0136 (430-504)||(10193-10269)
[»] scaffold0347 (1 HSPs)
scaffold0347 (547-579)||(6016-6048)
[»] scaffold0017 (1 HSPs)
scaffold0017 (516-568)||(32826-32878)


Alignment Details
Target: chr2 (Bit Score: 484; Significance: 0; HSPs: 72)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 484; E-Value: 0
Query Start/End: Original strand, 17 - 579
Target Start/End: Original strand, 4192315 - 4192880
Alignment:
Q  17 attaaggtcttgtgtttagttcacgttcttttggaaaggatcaacttgattatgcttaaatatca---tgttgtaaaataatattccttccttaccgaac 113  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||||||||||||| |||||||| |||    
T  4192315 attaaggtcttgtgtttagttcacgttcttttggaaatgatcaacttgattatgcttaaatatcatcatgttgtaaaataatattccctccttaccaaac 4192414  T
Q  114 taagattatctatccaaattcaagaacatttagatgaaatgacacgattctcttatagttattcaatgtttaggtttaaattcaactttggatatgcagt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4192415 taagattatctatccaaattcaagaacatttagatgaaatgacacgattctcttatagttattcaatgtttaggtttaaattcaactttagatatgcagt 4192514  T
Q  214 aacgttaaaactgtttgctgcccatttgagttccataaagcttgatgaattagtctcatcagttgcacgtgaaagatatccgatttacaccaaaaatata 313  Q
    |||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4192515 aacgttaaaactgtttgctgcccaattgagtcccataaggcttgatgaattagtctcatcagttgcacgtgaaagatatccgatttacaccaaaaatata 4192614  T
Q  314 aaattacaatcttaaatattgtacgttaatcatatcatagaaagttaagccgaccgtaattttctctctctaggttttctcttctagattttccatcgag 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  4192615 aaattacaatcttaaatattgtacgttaatcatatcatagaaagttaagccgaccgtagttttctctctctaggttttcccttctagattttccatcgag 4192714  T
Q  414 gtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttt 513  Q
    |||||||||||| |||||||||||||| | ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4192715 gtgtggttttggatcaatttttgacctgagatcacccctcttcatctttttctctatatttcaatctaaataagtgattttcacatatatttaggttttt 4192814  T
Q  514 tctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4192815 tctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgtggtgttgtttgat 4192880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 373 - 579
Target Start/End: Original strand, 32913077 - 32913283
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    |||||| ||||||||||||||||||||||||||  ||||||| |||||||||| |||||| ||||||| ||||||| | |||| ||| ||||||||||||    
T  32913077 ttttctttctctaggttttctcttctagattttaaatcgaggggtggttttggatcaattcttgacctgaaatcacccctcttgatccttttctctatat 32913176  T
Q  473 ttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgtt 572  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |    
T  32913177 ttcaatttaaataagtgattttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgct 32913276  T
Q  573 gtttgat 579  Q
    |||||||    
T  32913277 gtttgat 32913283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 360 - 579
Target Start/End: Original strand, 34598809 - 34599029
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatca-ctcatcttcat 458  Q
    |||||| || |||||||||||||||||||||||||||   | || | | | |||| |||||||||| |||||| ||||||| |||||| |||||||||||    
T  34598809 aagccggccctaattttctctctctaggttttctcttaccgtttcttcgttgaggggtggttttggatcaattcttgacctcaaatcaactcatcttcat 34598908  T
Q  459 ctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcg 558  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||| ||||||||||||||||||||||||| |||    
T  34598909 ctttttctctctatttcaatctaaataagtgattttcacatagatctagtttttttttttgtgatttcatcatctaagtgtggtggtttgttgttcatcg 34599008  T
Q  559 tcttgtgcggtgttgtttgat 579  Q
    |||||||||| ||||||||||    
T  34599009 tcttgtgcggcgttgtttgat 34599029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 370 - 577
Target Start/End: Original strand, 45128037 - 45128244
Alignment:
Q  370 taattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctcta 469  Q
    ||||||||||||||||||||||||||||    || | ||| |||| ||||||||||||||||| ||||||| ||||||| | |||||||||||||||||     
T  45128037 taattttctctctctaggttttctcttcccatttcttcattgagg-gtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctctt 45128135  T
Q  470 tatttcaatctaaataagtgattttcacatatatctagg-ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
    ||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  45128136 tatttcaatctaaataagtgactttcacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 45128235  T
Q  569 tgttgtttg 577  Q
     ||||||||    
T  45128236 cgttgtttg 45128244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 373 - 565
Target Start/End: Complemental strand, 21570654 - 21570460
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    |||||| |||||||||||||||||| ||||||| ||| |||  ||||||||||||||||| ||||||| ||||||| | |||||||||||||||||||||    
T  21570654 ttttctgtctctaggttttctcttccagatttttcattgagtggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctctatat 21570555  T
Q  473 ttcaatctaaataagtgattttcacatatatctag--gttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtg 565  Q
    |||||||||||||||||||||||||||| ||||||   |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21570554 ttcaatctaaataagtgattttcacatagatctagattttttttttttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtg 21570460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 373 - 579
Target Start/End: Complemental strand, 40626273 - 40626067
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    |||||||||| |||||||||||||| |  || |  || |||| ||| ||||||||| ||| ||||||| ||||||| | ||||| ||||||||||| |||    
T  40626273 ttttctctctttaggttttctcttccattttcttaattgaggggtgattttgggtctattcttgacctgaaatcacccctcttcgtctttttctctctat 40626174  T
Q  473 ttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgtt 572  Q
    ||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  40626173 ttcaatctaaataagggattttcacatagatctacgttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgtt 40626074  T
Q  573 gtttgat 579  Q
    |||||||    
T  40626073 gtttgat 40626067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 359 - 579
Target Start/End: Complemental strand, 8971888 - 8971666
Alignment:
Q  359 taagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcat 458  Q
    ||||| |||| ||||||||||||| |||||||| ||||  || || | ||| |||| ||||||||||||||||| ||||||| ||||||  | |||||||    
T  8971888 taagctgaccttaattttctctctttaggttttttcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatcatccctcttcat 8971789  T
Q  459 ctttttctctat--atttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgt 556  Q
    |||||||||| |  |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  8971788 ctttttctctctttattttaatctaaataagtgattttcacatagatctaggttttttctttgtgatttcatcatctaagtatggtggtttgttgttcgt 8971689  T
Q  557 cgtcttgtgcggtgttgtttgat 579  Q
    |||||||||| | ||||||||||    
T  8971688 cgtcttgtgcagcgttgtttgat 8971666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 370 - 579
Target Start/End: Complemental strand, 2808719 - 2808511
Alignment:
Q  370 taattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctcta 469  Q
    ||||||||| | |||||||||| ||||  |  || | ||| |||| ||||||||||||||||| ||||||| ||||||| | ||||||||| |||||||     
T  2808719 taattttctttttctaggttttttctttcattttcttcattgaggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctatttctctc 2808620  T
Q  470 tatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggt 569  Q
    ||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  2808619 tatttcagtctaaataagtgattttcacatagatctaggt-ttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggc 2808521  T
Q  570 gttgtttgat 579  Q
    ||||||||||    
T  2808520 gttgtttgat 2808511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 359 - 579
Target Start/End: Complemental strand, 40660188 - 40659971
Alignment:
Q  359 taagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcat 458  Q
    ||||||| || || |||||||| | ||| |||||||||  || || | ||| |||| ||||||||| ||||||| ||||||| ||||||| |||||||||    
T  40660188 taagccggccctagttttctctttttagattttctcttagagtttcttcattgagg-gtggttttgagtcaattcttgacctgaaatcacacatcttcat 40660090  T
Q  459 ctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcg 558  Q
    ||||||||||||  |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  40660089 ctttttctctat--ttcaatctaaataagtgattttcacatagatctagattttttctttgtgatttcatcatctaagtgtggtgctttgttgttcgtcg 40659992  T
Q  559 tcttgtgcggtgttgtttgat 579  Q
    |||||||||| ||||||||||    
T  40659991 tcttgtgcggcgttgtttgat 40659971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 411 - 579
Target Start/End: Complemental strand, 3270436 - 3270268
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggtt 510  Q
    |||| ||||||||||||||||| ||||||| ||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||    
T  3270436 gaggggtggttttgggtcaattcttgacctgaaatcactcattttcatctttttctttttatttcaatctaaataagtgattttcacatagatctaggtt 3270337  T
Q  511 ttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| || ||||||||||    
T  3270336 ttttttttgtgatttcatcatctaagtgtggtggcttgttgttcgtcgttttgtggggcgttgtttgat 3270268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 411 - 579
Target Start/End: Original strand, 3725054 - 3725222
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggtt 510  Q
    |||| |||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||| ||||||||||||||||||||| |||| | ||    
T  3725054 gaggggtggttttgggtcaatttttgacctaaaatcattcctcttcatctttttctctctatttcaatataaataagtgattttcacatagatcttgatt 3725153  T
Q  511 ttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||||||||||||||  |||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  3725154 ttttctttgtgatttcatcgtctaagtgtggtggtttgttgttcgttgtcttgtacggcgttgtttgat 3725222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 360 - 579
Target Start/End: Original strand, 6173454 - 6173674
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc 459  Q
    ||||||||| || ||||||||||||||||||||| ||   | || | ||| |||| |||||||| |||| ||| ||||||| ||||||| | ||||||||    
T  6173454 aagccgaccctagttttctctctctaggttttcttttacggtttcttcattgaggggtggttttcggtctattcttgacctgaaatcacccctcttcatc 6173553  T
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatctagg-ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcg 558  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||| |    
T  6173554 tttttctctctatttcaatctaaataagtgattttcacatagatctaggtttttttctttgtgatttcatcatcgaagtgtggtggtttgttgttcgttg 6173653  T
Q  559 tcttgtgcggtgttgtttgat 579  Q
    ||||||| || ||||||||||    
T  6173654 tcttgtgtggcgttgtttgat 6173674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 373 - 579
Target Start/End: Complemental strand, 27249397 - 27249190
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    ||||||||||||||||||||||||  |  || | ||| || | ||||||||||||||||  ||||||| ||||||| | ||||||||||||||||| |||    
T  27249397 ttttctctctctaggttttctcttacaatttcttcattgaagggtggttttgggtcaatacttgacctgaaatcacccctcttcatctttttctctttat 27249298  T
Q  473 ttcaatctaaataagtgattttcacatatatctaggtt-ttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgt 571  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||  |||||||||||||| |||||||||||||||||||||||| ||    
T  27249297 ttcaatctaaataagtgattttcacatagatctaggtttttttctttgtaatttcaagatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgt 27249198  T
Q  572 tgtttgat 579  Q
    ||||||||    
T  27249197 tgtttgat 27249190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 411 - 579
Target Start/End: Original strand, 30420550 - 30420720
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctagg-- 508  Q
    |||| |||||||||| |||||||||||||| ||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||      
T  30420550 gaggggtggttttggatcaatttttgacctgaaatcacccctcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggtt 30420649  T
Q  509 ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  30420650 ttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgat 30420720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 359 - 579
Target Start/End: Complemental strand, 9986607 - 9986381
Alignment:
Q  359 taagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttca- 457  Q
    |||||||||| || ||||||||||||||||||||||||  || || | ||| |||| ||||||||||||||||| ||||||| ||||||  | ||||||     
T  9986607 taagccgaccctagttttctctctctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatcatccctcttcaa 9986508  T
Q  458 -tctttttctctatatttcaatctaaataagtgattttcacatatatctaggttt----tttctttgtgatttcataatctaagtgtggtggtttgttgt 552  Q
     | ||||| ||| || |||||||||||||||||||||||||||| ||||||||||    ||||||||||||||||| |||||||||||||||||||||||    
T  9986507 ttttttttatctctaattcaatctaaataagtgattttcacatagatctaggtttattttttctttgtgatttcatcatctaagtgtggtggtttgttgt 9986408  T
Q  553 tcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||||| ||||||||||    
T  9986407 tcgtcgtcttgtgcggcgttgtttgat 9986381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 417 - 579
Target Start/End: Complemental strand, 7015912 - 7015750
Alignment:
Q  417 tggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttct 516  Q
    |||||||||||||||| ||||||| ||||||| | || | |||||||||||| ||||||||||||||||| ||||||||||||| || |||||||||||     
T  7015912 tggttttgggtcaattcttgacctgaaatcacccctcctaatctttttctctttatttcaatctaaataattgattttcacatagatttaggttttttcc 7015813  T
Q  517 ttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7015812 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgat 7015750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 374 - 559
Target Start/End: Complemental strand, 32680826 - 32680640
Alignment:
Q  374 tttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatt 473  Q
    ||||||||||||||||||||||||  | || | ||| | || |||||||| |||| ||| ||||||| ||||||||||||||||||||||||||| ||||    
T  32680826 tttctctctctaggttttctcttcccgtttcttcattgggg-gtggttttcggtcgattcttgacctgaaatcactcatcttcatctttttctctctatt 32680728  T
Q  474 tcaatctaaataagtgattttcacatatatctaggtt--ttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgt 559  Q
    ||||||||||||||||| ||||||||| |||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  32680727 tcaatctaaataagtgactttcacatagatctaggttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 32680640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 373 - 579
Target Start/End: Original strand, 36233840 - 36234050
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    |||||||||||||| |||||||||  |  || | ||| |||| |||||||||||||||||  |||||| ||||||| | ||||||||||||||||| |||    
T  36233840 ttttctctctctagattttctcttgcaatttcttcattgaggggtggttttgggtcaattcatgacctgaaatcacccctcttcatctttttctctttat 36233939  T
Q  473 ttcaatctaaataagtgattttcacatatatctag----gttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
    |||||||||||||||||||||||||||| ||||||     |||||||||||| ||||||| |||||||||||||| ||| ||||||||||||||||||||    
T  36233940 ttcaatctaaataagtgattttcacatagatctagattttttttttctttgtaatttcatcatctaagtgtggtgattttttgttcgtcgtcttgtgcgg 36234039  T
Q  569 tgttgtttgat 579  Q
     ||||||||||    
T  36234040 cgttgtttgat 36234050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 373 - 579
Target Start/End: Original strand, 27476990 - 27477190
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    |||||| |||||||||||| |||||| ||||||| || ||||  |||||||||||||||| ||||| | ||||||| | |||||||||||||||||||||    
T  27476990 ttttctgtctctaggttttttcttcttgattttctattgagggatggttttgggtcaattattgacatgaaatcacccctcttcatctttttctctatat 27477089  T
Q  473 ttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgtt 572  Q
    |||||||||||||||| ||||||||||| |||||| |||||||||||||||||||| |||      ||||||||||||||| || ||||||||||| | |    
T  27477090 ttcaatctaaataagtaattttcacatagatctagattttttctttgtgatttcatcatc------tggtggtttgttgtttgtagtcttgtgcggcgct 27477183  T
Q  573 gtttgat 579  Q
    |||||||    
T  27477184 gtttgat 27477190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 417 - 579
Target Start/End: Original strand, 4228011 - 4228175
Alignment:
Q  417 tggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggtttt--tt 514  Q
    |||||||||||||||| ||||||| ||||||| ||||||||| ||||| ||| ||||||||| |||||||||||||| |||||| ||||| |||||  ||    
T  4228011 tggttttgggtcaattcttgacctgaaatcacacatcttcatatttttatctttatttcaatataaataagtgatttacacatagatctatgtttttttt 4228110  T
Q  515 ctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  4228111 ctttgtgatttcatcatctaagtgtgatggtttgttgttcgtcgtcttgtgcggcgttgtttgat 4228175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 373 - 579
Target Start/End: Complemental strand, 26025652 - 26025449
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaattttt-gacctaaaatcactc-atcttcatctttttctctat 470  Q
    |||| ||||||||||||||||||||||| || | ||||||||  | ||||     |||||||| || || ||||||| | |||||||||||||||||| |    
T  26025652 ttttttctctctaggttttctcttctagtttcttcatcgagggatagttt-----caattttttgatctgaaatcaccccatcttcatctttttctctct 26025558  T
Q  471 atttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtg 570  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| || |||||||||| |||||||| |||||||||||||||| |    
T  26025557 atttcaatctaaataagtggttttcacatagatctaggttttttctttgtgatttcatcatgtaagtgtggtagtttgttggtcgtcgtcttgtgcggcg 26025458  T
Q  571 ttgtttgat 579  Q
    |||||||||    
T  26025457 ttgtttgat 26025449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 370 - 579
Target Start/End: Complemental strand, 20047330 - 20047121
Alignment:
Q  370 taattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctcta 469  Q
    |||||||||||||||||||||||||||   | || | ||| | || || ||||||| |||||| ||||||| ||||||| | | |||||||||||||||     
T  20047330 taattttctctctctaggttttctcttaccgtttcttcattggggggtagttttggatcaattcttgacctgaaatcaccc-tattcatctttttctctc 20047232  T
Q  470 tatttcaatctaaataagtgattttcacatatatctaggtttttt-ctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
    | ||||||||||||||||||| ||| ||||| || |||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20047231 tttttcaatctaaataagtgacttttacatagatttaggtttttttcattgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 20047132  T
Q  569 tgttgtttgat 579  Q
     ||||||||||    
T  20047131 cgttgtttgat 20047121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 442 - 577
Target Start/End: Original strand, 41430932 - 41431068
Alignment:
Q  442 aaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggt-tttttctttgtgatttcataatctaagtgtg 540  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||| | ||| ||||| |||||||| ||||||||||||||||||| |||||||||||    
T  41430932 aaatcacccctcttcatctttttctctatatttcaatctaaataagtcacttttacatagatctaggtgtttttctttgtgatttcatcatctaagtgtg 41431031  T
Q  541 gtggtttgttgttcgtcgtcttgtgcggtgttgtttg 577  Q
    |||||||||||||||||||||||||||| ||||||||    
T  41431032 gtggtttgttgttcgtcgtcttgtgcggcgttgtttg 41431068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 359 - 562
Target Start/End: Complemental strand, 41713025 - 41712821
Alignment:
Q  359 taagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcat 458  Q
    |||||||||| || |||||||| |||||||||||||||  |  || | ||| |||| |||||||||||| |||| ||||| | ||||||| ||| |||||    
T  41713025 taagccgaccctagttttctctatctaggttttctcttacaatttcttcattgaggggtggttttgggttaattcttgacgtgaaatcacccattttcat 41712926  T
Q  459 ctttttctctatatttcaatctaaataagtgattttcacatatatctagg-ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtc 557  Q
    | |||||||| ||||| ||||||||||||||||||||||||| || |||| |||||||| ||||||||| | ||||||||||||||||||||||||||||    
T  41712925 cattttctctctattttaatctaaataagtgattttcacatagatttaggtttttttctctgtgatttcctcatctaagtgtggtggtttgttgttcgtc 41712826  T
Q  558 gtctt 562  Q
    |||||    
T  41712825 gtctt 41712821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 461 - 579
Target Start/End: Original strand, 22421659 - 22421777
Alignment:
Q  461 ttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtc 560  Q
    |||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  22421659 ttttctctctatttcaatctaaataagtgactttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcatc 22421758  T
Q  561 ttgtgcggtgttgtttgat 579  Q
    ||| |||||||||||||||    
T  22421759 ttgcgcggtgttgtttgat 22421777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 378 - 577
Target Start/End: Original strand, 25086874 - 25087077
Alignment:
Q  378 tctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaa 477  Q
    ||||||||||||||||||||  | || | |||  ||| ||||||||||||||||| ||||||| ||||||| | ||||||||||||||  | ||||| ||    
T  25086874 tctctctaggttttctcttccggtttcttcatttaggggtggttttgggtcaattattgacctgaaatcacccctcttcatctttttccatctatttgaa 25086973  T
Q  478 tctaaataagtg----attttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttg 573  Q
    |||| |||||||    ||||||||||| ||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||  ||||    
T  25086974 tctatataagtgagtgattttcacatagatctaggttttttatttttgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacgttg 25087073  T
Q  574 tttg 577  Q
    ||||    
T  25087074 tttg 25087077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 452 - 579
Target Start/End: Original strand, 8805781 - 8805908
Alignment:
Q  452 tcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttg 551  Q
    ||||||| ||||||||| ||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  8805781 tcttcatatttttctctttatttcaatttaaataagtgattttcacatggatctaggttttttctttgtgatttcatcatctgagtgtggtggtttgttg 8805880  T
Q  552 ttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||||||||||||  ||||||||||    
T  8805881 ttcgtcgtcttgtgcgacgttgtttgat 8805908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 384 - 579
Target Start/End: Complemental strand, 459509 - 459313
Alignment:
Q  384 taggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaa 483  Q
    |||||||||||||| || || | ||| |||| ||||||||||||||||||||||||| ||||||| | |||||||| |||||||| ||||||| | ||||    
T  459509 taggttttctcttccagtttcttcattgaggggtggttttgggtcaatttttgacctgaaatcacccctcttcatccttttctctctatttcattttaaa 459410  T
Q  484 taagtgattttcacatatatctagg-ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||| |||||||||||| || |||| ||||||||| |||||||| | |||| ||||| ||||| || ||||||||||||||| ||  ||||||||||    
T  459409 taagcgattttcacatagatataggtttttttcttcgtgatttcgtcatctgagtgtcgtggtgtgctgttcgtcgtcttgtacgacgttgtttgat 459313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 427 - 579
Target Start/End: Complemental strand, 32197986 - 32197834
Alignment:
Q  427 tcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttc 526  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||| |||||||  |||| || ||||||||||||||||||||||    
T  32197986 tcaatttttgaccaaaaatcactcatcttcatctttttctctttatttcaatataaataaatgatttttgcataaatttaggttttttctttgtgatttc 32197887  T
Q  527 ataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
     | ||||||||||||| || |||||  | |||||||| ||||  |||||||||    
T  32197886 gtcatctaagtgtggtagtgtgttgcccatcgtcttgcgcggcattgtttgat 32197834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 411 - 567
Target Start/End: Complemental strand, 39642067 - 39641909
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggtt 510  Q
    |||| |||| ||||| |||||||||||||| |||||||| |||||||||||||||||| ||||||||| ||||||| ||||||||||||| |||||||||    
T  39642067 gaggagtggctttggatcaatttttgacctgaaatcacttatcttcatctttttctctctatttcaatttaaataaatgattttcacatagatctaggtt 39641968  T
Q  511 --ttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcg 567  Q
      ||||||| |||||||||| |||| | ||| |||||   ||||||||| |||||||||    
T  39641967 ttttttcttcgtgatttcatcatctgaatgttgtggtagtttgttcgtcatcttgtgcg 39641909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 373 - 575
Target Start/End: Original strand, 17319161 - 17319360
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    |||| |||||||||||||||||||| || |||| ||  ||||  ||| |||||||||||||||||||| ||||||  | || |||| ||||||| | |||    
T  17319161 ttttttctctctaggttttctcttcgagttttttcaatgagga-tggatttgggtcaatttttgacctgaaatcatccctcctcat-tttttctatctat 17319258  T
Q  473 ttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgtt 572  Q
    |||||||||||||| | ||||||||||| ||||||||||||||||  ||||||| | |||| ||||||||||| |||||||| ||||||||||| | |||    
T  17319259 ttcaatctaaataact-attttcacatagatctaggttttttcttcatgatttcgtcatctgagtgtggtggtgtgttgttcttcgtcttgtgcagcgtt 17319357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 420 - 579
Target Start/End: Original strand, 27949306 - 27949468
Alignment:
Q  420 ttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctt-- 517  Q
    ||||||| ||||| ||||||| ||||||| | | |||||| ||||| || | ||||||||||||||||||||||||||||| ||||||||||||| ||      
T  27949306 ttttgggacaattcttgacctgaaatcacac-tattcatccttttcgctctgtttcaatctaaataagtgattttcacatagatctaggtttttttttct 27949404  T
Q  518 --tgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
      || |||||||| |||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  27949405 attgcgatttcatcatctaagtgtggtggtttattgttcgtcgtcttgtacggcgttgtttgat 27949468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 480 - 579
Target Start/End: Complemental strand, 3269251 - 3269150
Alignment:
Q  480 taaataagtgattttcacatatatctaggttttttcttt--gtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttg 577  Q
    ||||||||||||||||||||| ||||||||||||| |||  |||||||||| ||||||||||||||| |||||||||||||| ||||| || ||||||||    
T  3269251 taaataagtgattttcacatagatctaggttttttttttttgtgatttcatcatctaagtgtggtggcttgttgttcgtcgttttgtggggcgttgtttg 3269152  T
Q  578 at 579  Q
    ||    
T  3269151 at 3269150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 480 - 579
Target Start/End: Complemental strand, 3269810 - 3269709
Alignment:
Q  480 taaataagtgattttcacatatatctaggttttttcttt--gtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttg 577  Q
    ||||||||||||||||||||| ||||||||||||| |||  |||||||||| ||||||||||||||| |||||||||||||| ||||| || ||||||||    
T  3269810 taaataagtgattttcacatagatctaggttttttttttttgtgatttcatcatctaagtgtggtggcttgttgttcgtcgttttgtggggcgttgtttg 3269711  T
Q  578 at 579  Q
    ||    
T  3269710 at 3269709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 452 - 528
Target Start/End: Complemental strand, 31581886 - 31581810
Alignment:
Q  452 tcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcat 528  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||    
T  31581886 tcttcatctttttctctctatttcaatctaaataagtgattttcacatagatctagtttttttctttttgatttcat 31581810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 388 - 567
Target Start/End: Complemental strand, 9374780 - 9374607
Alignment:
Q  388 ttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataag 487  Q
    ||||||||||||| || | ||| ||||  |||||||||||||||||||||| | ||||||    ||||||||||||||| | |||||      |||||||    
T  9374780 ttttctcttctagtttcttcattgagggatggttttgggtcaatttttgacatgaaatcaacattcttcatctttttctttctattt------aaataag 9374687  T
Q  488 tgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcg 567  Q
     |||||||||||| ||||| | |||||||| |||||||| | |||| | ||||||||| ||||||||||| |||||||||    
T  9374686 ggattttcacataaatctaagatttttcttcgtgatttcgtcatcttattgtggtggtgtgttgttcgtcatcttgtgcg 9374607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 429 - 514
Target Start/End: Original strand, 42949605 - 42949691
Alignment:
Q  429 aatttttgacctaaaatcactcatcttcatcttttt-ctctatatttcaatctaaataagtgattttcacatatatctaggtttttt 514  Q
    |||| ||||| | ||||||| | ||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  42949605 aattcttgacttgaaatcacccctcttcatcttttttctctttatttcaatctaaataagtgattttcacatagatctaggtttttt 42949691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 416 - 500
Target Start/End: Original strand, 18694925 - 18695010
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatcttttt-ctctatatttcaatctaaataagtgattttcacata 500  Q
    ||||| ||||||||| |||| ||| ||||||| |||||||||||||||| |||| ||||||||||||||||||||||||| |||||    
T  18694925 gtggtattgggtcaactttttacccaaaatcattcatcttcatcttttttctctctatttcaatctaaataagtgatttttacata 18695010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 417 - 493
Target Start/End: Original strand, 24587593 - 24587669
Alignment:
Q  417 tggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattt 493  Q
    ||||||||||||||||||||||| ||||||||   ||||||||||||| ||||||||||||| ||||||| ||||||    
T  24587593 tggttttgggtcaatttttgacccaaaatcacctctcttcatctttttatctatatttcaatttaaataaatgattt 24587669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 416 - 579
Target Start/End: Original strand, 8308051 - 8308213
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttct--ctatatttcaatctaaataagtgattttcacatatatctaggttttt 513  Q
    |||||||||| |||| ||||||| | |||| |  | ||||||||||||| |  || || ||||||||||||  |||||||||||||| ||||||||||||    
T  8308051 gtggttttggatcaacttttgacttgaaataatccttcttcatctttttttttctctaattcaatctaaat--gtgattttcacatagatctaggttttt 8308148  T
Q  514 tctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||| |||||||| | |||| | |||||  |  |||||||||||||||||||| | ||||||||||    
T  8308149 tcttcgtgatttcgtcatctgactgtgg-cgcgtgttgttcgtcgtcttgtgcagcgttgtttgat 8308213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 521 - 576
Target Start/End: Complemental strand, 31580686 - 31580631
Alignment:
Q  521 gatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgttt 576  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  31580686 gatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgttt 31580631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 411 - 568
Target Start/End: Complemental strand, 37876846 - 37876686
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctc---tatatttcaatctaaataagtgattttcacatatatctag 507  Q
    |||| |||||||| ||||||||||||||||| |||||| | | | |||||||||| |   | | ||| |||||||||||||| ||||||||| |||| |     
T  37876846 gaggggtggttttaggtcaatttttgacctagaatcacccttgtacatctttttcccctttttcttttaatctaaataagtggttttcacatctatcaaa 37876747  T
Q  508 gttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
     |||||  ||||||||||  |  |||||||| || | ||||||||||||||||||||||||    
T  37876746 ttttttcttttgtgatttggtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcgg 37876686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 420 - 579
Target Start/End: Complemental strand, 10237452 - 10237292
Alignment:
Q  420 ttttgggtcaatttttgacctaaaatcactcatcttcatcttttt--ctctatatttcaatctaaataagtgattttcacatatatctaggttttttctt 517  Q
    |||| ||||||||||||||||| |||||| | ||| |||||||||  | || | ||||||||||||||||||||||||||||| ||| ||  ||||||||    
T  10237452 ttttaggtcaatttttgacctagaatcacccctctacatcttttttcccctttctttcaatctaaataagtgattttcacatacatcaag--tttttctt 10237355  T
Q  518 t-gtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    | |||||||| |  ||| |||| |  | | |||||||||||||||||||| | ||| ||||||    
T  10237354 tcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcagcgttctttgat 10237292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 419 - 507
Target Start/End: Original strand, 38293427 - 38293514
Alignment:
Q  419 gttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctag 507  Q
    ||||||||||| |||||||   ||||||||||||||||||| |||||| | |||||||||| |||||||||| ||||||||| ||||||    
T  38293427 gttttgggtcactttttgattcaaaatcactcatcttcatcattttctatgtatttcaatcaaaataagtga-tttcacatagatctag 38293514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 419 - 514
Target Start/End: Original strand, 9418303 - 9418397
Alignment:
Q  419 gttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggtttttt 514  Q
    ||||||| ||||| |||||| |||||||||||||||| ||  |||| ||| ||||||||| | ||||||||||||||||||| |||||| ||||||    
T  9418303 gttttggatcaatgtttgacataaaatcactcatcttaattgttttatctctatttcaat-ttaataagtgattttcacatagatctagttttttt 9418397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 411 - 579
Target Start/End: Complemental strand, 12648172 - 12647992
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatcttttt-ctctata-tttcaatctaaataagtgattttcacatatatctagg 508  Q
    |||| |||||||| ||||| ||||||||||| |||||| | ||  ||||||||| |||| |  |||||||||||||||||||||| |||||||||| ||     
T  12648172 gaggggtggttttaggtcattttttgacctagaatcacccctccacatcttttttctcttttctttcaatctaaataagtgatttccacatatatcaag- 12648074  T
Q  509 ttttttcttt-----------gtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    | ||||||||           ||||||||||  |||||||| |||| | |||||||||||||||||||||| ||||||||||    
T  12648073 tgttttcttttgtgtattttcgtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgat 12647992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 411 - 521
Target Start/End: Original strand, 24461290 - 24461400
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatct-ttttctctatatttcaatctaaataagtgattttcacatatatctaggt 509  Q
    |||| |||||||| ||||| ||||||||||| |||||||| ||| ||||  |||||||| | |||||||||||||||||||||| |||||||||| ||      
T  24461290 gaggggtggttttaggtcattttttgacctagaatcactcctctgcatccgttttctcttt-tttcaatctaaataagtgatttccacatatatcaagtg 24461388  T
Q  510 tttttctttgtg 521  Q
    ||||| ||||||    
T  24461389 tttttttttgtg 24461400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 419 - 500
Target Start/End: Complemental strand, 30923672 - 30923593
Alignment:
Q  419 gttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacata 500  Q
    ||||| |||||||||||||||  ||||||| |||||||||||||| |||  ||||||||||||||||| ||||||| |||||    
T  30923672 gttttaggtcaatttttgacccgaaatcacccatcttcatcttttactc--tatttcaatctaaataaatgatttttacata 30923593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 411 - 500
Target Start/End: Original strand, 3308790 - 3308881
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatcttttt--ctctatatttcaatctaaataagtgattttcacata 500  Q
    |||| ||| |||| ||||||||||||||||| |||||| | | | |||||||||  | || |||||||||||||||||||||||||||||||    
T  3308790 gaggggtgattttaggtcaatttttgacctagaatcacccctttgcatcttttttcccctttatttcaatctaaataagtgattttcacata 3308881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 442 - 526
Target Start/End: Original strand, 36323761 - 36323847
Alignment:
Q  442 aaatcactcatcttcatctttttctcta--tatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttc 526  Q
    ||||||||||||||| ||||||| | |   |||| || ||||||||||||||||||||||| || |||||||||||| |||||||||    
T  36323761 aaatcactcatcttcgtctttttttatcactattacattctaaataagtgattttcacatagatttaggttttttctctgtgatttc 36323847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 518
Target Start/End: Complemental strand, 43397362 - 43397260
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctata-tttcaatctaaataagtgattttcacatatatctaggtttttt 514  Q
    |||||||| ||||| ||||||||||| ||||||   ||| |||||||||| || |  |||||||||||||||||| |||||||||||||| | |||||||    
T  43397362 gtggttttaggtcattttttgacctagaatcacctctctacatctttttcccttttctttcaatctaaataagtggttttcacatatatc-aagtttttt 43397264  T
Q  515 cttt 518  Q
    ||||    
T  43397263 cttt 43397260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 360 - 478
Target Start/End: Complemental strand, 33229247 - 33229129
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc 459  Q
    |||||| || || ||| ||||||||||||||||||||   | || | ||| || | ||||||||||||||||| |||| ||||||||||   ||||||||    
T  33229247 aagccggccctagtttcctctctctaggttttctcttactgtttcttcattgaagggtggttttgggtcaattattgagctaaaatcacctctcttcatc 33229148  T
Q  460 tttttctctatatttcaat 478  Q
    ||||| ||| |||||||||    
T  33229147 tttttttctctatttcaat 33229129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 419 - 579
Target Start/End: Complemental strand, 37614325 - 37614164
Alignment:
Q  419 gttttgggtcaatttttgacctaaaatcactcat-cttcatcttttt--ctctatatttcaatctaaataagtgattttcacatatatctaggttttttc 515  Q
    ||||||| | |||||||||||| |||||||||   ||||||||||||  |||| |||||||  |||||||||||||||||| ||| |||||  ||| | |    
T  37614325 gttttggattaatttttgacctgaaatcactctcgcttcatctttttttctctctatttca--ctaaataagtgattttcatatagatctaaatttgt-c 37614229  T
Q  516 tttgtgatttcataatcta-agtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    || ||| |||| ||||||  ||||||||| | |||||||| ||||||||||||  ||||||||||    
T  37614228 ttcgtggtttcgtaatcttgagtgtggtgatgtgttgttcttcgtcttgtgcgtcgttgtttgat 37614164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 426 - 518
Target Start/End: Original strand, 14955389 - 14955482
Alignment:
Q  426 gtcaatttttgacctaaaatcactcatcttcatcttttt--ctctatatttcaatctaaataagtgattttcacatatatctaggttttttcttt 518  Q
    |||||||||||||||| |||||  | ||| |||||||||  |||| | |||||||||||||||||||||| |||||| ||| | |||||||||||    
T  14955389 gtcaatttttgacctagaatcatccctctgcatcttttttcctctttctttcaatctaaataagtgatttccacatacatc-aagttttttcttt 14955482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 411 - 497
Target Start/End: Complemental strand, 32448869 - 32448782
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatcttttt-ctctatatttcaatctaaataagtgattttcac 497  Q
    |||| |||||||| ||||| | |||||||||||||||| | ||| ||||||||| | || | |||| |||||||||||||||||||||    
T  32448869 gaggggtggttttaggtcattatttgacctaaaatcacccctctgcatctttttcccctttctttcgatctaaataagtgattttcac 32448782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 504
Target Start/End: Complemental strand, 30400282 - 30400190
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactc-atcttcatcttttt---ctctatatttcaatctaaataagtgattttcacatatatc 504  Q
    |||||||| | ||| |||||||||||||||||||| |||| |||||||||   || | | ||| |||||||||||||| ||||||||||||||    
T  30400282 gtggttttagatcattttttgacctaaaatcactccatctacatcttttttttctttttcttttaatctaaataagtgtttttcacatatatc 30400190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 517
Target Start/End: Complemental strand, 39285496 - 39285398
Alignment:
Q  420 ttttgggtcaatttttgacctaaaatcactcatcttcatcttttt-ctctatatttcaatctaaataagtgattttcacatatatctaggttttttctt 517  Q
    |||||||||||| |||||  | |||||||  ||||| |||||||| ||||  |||||| | |||||||||| |||||||||| |||||| |||||||||    
T  39285496 ttttgggtcaatatttgagttgaaatcacctatctttatctttttcctctccatttcattttaaataagtggttttcacataaatctagtttttttctt 39285398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 516 - 566
Target Start/End: Complemental strand, 39310984 - 39310934
Alignment:
Q  516 tttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgc 566  Q
    ||||||||||||| |||||||||||||| | |||||||| |||||||||||    
T  39310984 tttgtgatttcatcatctaagtgtggtgttgtgttgttcttcgtcttgtgc 39310934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 511 - 568
Target Start/End: Original strand, 18763431 - 18763488
Alignment:
Q  511 ttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
    |||| |||||||||||||  |||||||| |||| | ||||||||||||||||||||||    
T  18763431 ttttttttgtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcgg 18763488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 460 - 504
Target Start/End: Complemental strand, 23933818 - 23933774
Alignment:
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatc 504  Q
    |||||| || ||||||||||||||||||||| |||||||||||||    
T  23933818 tttttccctttatttcaatctaaataagtgactttcacatatatc 23933774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 488
Target Start/End: Original strand, 13141352 - 13141415
Alignment:
Q  425 ggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagt 488  Q
    ||||||||||||||| |||||||  |||| |||||||||| | |  ||||||||||||||||||    
T  13141352 ggtcaatttttgacccaaaatcatccatcatcatctttttattttcatttcaatctaaataagt 13141415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 472 - 518
Target Start/End: Complemental strand, 4904330 - 4904285
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatctaggttttttcttt 518  Q
    |||||||||||||||||| |||||||||||||| | |||||||||||    
T  4904330 tttcaatctaaataagtggttttcacatatatc-aagttttttcttt 4904285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 462
Target Start/End: Original strand, 14423149 - 14423195
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatcttt 462  Q
    |||||||| ||||||||||||||||| |||||||| ||| |||||||    
T  14423149 gtggttttaggtcaatttttgacctagaatcactcgtctgcatcttt 14423195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 568
Target Start/End: Original strand, 7448099 - 7448267
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctc--tatatttcaatctaaataagtgattttcacatatatctagg 508  Q
    |||| |||||||| ||||| |||||| |||| |||||| | ||| |||||||||| |  | | ||||||||||||||| || ||||||||| |||| ||     
T  7448099 gaggggtggttttaggtcattttttgtcctagaatcacccctctacatctttttccccttttctttcaatctaaataaatggttttcacatctatcaagt 7448198  T
Q  509 tttt---------ttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
    ||||         || ||||||||||| |  |||||||| || | | ||||||||||||||||||||||    
T  7448199 ttttccttttgtgttttttgtgatttcgttgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgg 7448267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 514
Target Start/End: Original strand, 23903311 - 23903368
Alignment:
Q  457 atctttttctctatatttcaatctaaataagtgattttcacatatatctaggtttttt 514  Q
    ||||||||||||  |||| ||| |||||||||| |||| |||||||||||| ||||||    
T  23903311 atctttttctctccattttaatataaataagtggttttgacatatatctagatttttt 23903368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 470 - 562
Target Start/End: Original strand, 10248080 - 10248171
Alignment:
Q  470 tatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtctt 562  Q
    ||||||||||||| ||||||||||  | ||| ||||||| |||||||| |||| ||| | |||| ||||||| ||| ||||||| | ||||||    
T  10248080 tatttcaatctaattaagtgatttctatatagatctagg-tttttcttcgtgacttcgtcatctgagtgtggcggtgtgttgtttgccgtctt 10248171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 504
Target Start/End: Complemental strand, 19596061 - 19596029
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatc 504  Q
    ||||||| |||||||||||||||||||||||||    
T  19596061 tttcaatgtaaataagtgattttcacatatatc 19596029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 504
Target Start/End: Complemental strand, 28227870 - 28227838
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatc 504  Q
    ||||||||||||||||||||||||||| |||||    
T  28227870 tttcaatctaaataagtgattttcacaaatatc 28227838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 504
Target Start/End: Complemental strand, 29279755 - 29279723
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatc 504  Q
    |||||||||||||||||| ||||||||||||||    
T  29279755 tttcaatctaaataagtggttttcacatatatc 29279723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 504
Target Start/End: Complemental strand, 29574818 - 29574786
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatc 504  Q
    |||||||||||||||||||||| ||||||||||    
T  29574818 tttcaatctaaataagtgatttccacatatatc 29574786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 504
Target Start/End: Complemental strand, 31128964 - 31128932
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatc 504  Q
    |||||||||||||||||| ||||||||||||||    
T  31128964 tttcaatctaaataagtggttttcacatatatc 31128932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 504
Target Start/End: Original strand, 31788371 - 31788403
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatc 504  Q
    |||||||||||||||||||||||||||| ||||    
T  31788371 tttcaatctaaataagtgattttcacatctatc 31788403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 182; Significance: 4e-98; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 342 - 579
Target Start/End: Complemental strand, 37188869 - 37188633
Alignment:
Q  342 atcatatcatagaaagttaagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgaccta 441  Q
    |||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||     
T  37188869 atcatatcatagaaagttaagccggccctagttttctctctctaggttttctcttctagatttttcatcgaggagtggttttgggtcaattattgacctg 37188770  T
Q  442 aaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtgg 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||    
T  37188769 aaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatcta-gttttttctttgtgatttcatcatttaagtgtgg 37188671  T
Q  542 tggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||||||| |||||||| | ||||||||    
T  37188670 tggtttgttgttcgtcgttttgtgcggcgctgtttgat 37188633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 360 - 579
Target Start/End: Complemental strand, 10390012 - 10389793
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc 459  Q
    |||||| || || |||||||| ||||||||||||||| ||| || | ||| |||| ||||||||||||||||| ||||||| ||||||||||||||||||    
T  10390012 aagccggccctagttttctctttctaggttttctcttatagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatcactcatcttcatc 10389913  T
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgt 559  Q
    ||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||    
T  10389912 tttttctctctatttcaatctaaataagtgactttcacatagatctaggttttttccttttgatttcatcatctaagtgtggtggtttgttgttcgtcgt 10389813  T
Q  560 cttgtgcggtgttgtttgat 579  Q
    ||||||||| ||||||||||    
T  10389812 cttgtgcggcgttgtttgat 10389793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 379 - 579
Target Start/End: Original strand, 51317834 - 51318035
Alignment:
Q  379 ctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatt-tttgacctaaaatcactcatcttcatctttttctctatatttcaa 477  Q
    |||||||| || |||||||||| || | ||| |||| ||| ||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||    
T  51317834 ctctctagattgtctcttctagtttcttcattgaggggtgattttgggtcaattctttgacctgaaatcactcatcttcatctttttctctctatttcaa 51317933  T
Q  478 tctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttg 577  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||  |||||||    
T  51317934 tctaaataagtgattttcacatagatctaggttttttctttttgatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcattgtttg 51318033  T
Q  578 at 579  Q
    ||    
T  51318034 at 51318035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 360 - 579
Target Start/End: Original strand, 43444223 - 43444443
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc 459  Q
    |||||| || || ||||||||||||||||||||||||  |  |  | ||| |||| || ||||||||||||||||||| || ||||||| ||||||||||    
T  43444223 aagccggccctagttttctctctctaggttttctcttacaattccttcattgaggggtagttttgggtcaatttttgatctgaaatcacccatcttcatc 43444322  T
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatctagg-ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcg 558  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||| ||||||||||||||    
T  43444323 tttttctctttatttcaatctaaataagtgattttcacatatatctaggtttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcg 43444422  T
Q  559 tcttgtgcggtgttgtttgat 579  Q
    |||||||||| ||||||||||    
T  43444423 tcttgtgcggcgttgtttgat 43444443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 370 - 579
Target Start/End: Complemental strand, 10359796 - 10359586
Alignment:
Q  370 taattttctctctctaggttttctcttctagattttccatcgaggtg-tggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctct 468  Q
    ||||||| ||||||||| |||||||||  || || | ||| |||| | |||||||||||||||||||||||| ||||||| || ||||||||||||||||    
T  10359796 taattttttctctctagattttctctttcagtttcttcattgagggggtggttttgggtcaatttttgacctgaaatcacccaacttcatctttttctct 10359697  T
Q  469 atatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
     |||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||| |||||    
T  10359696 ctatttcgatctaaataagtgattttaacatatatctaggttttttcttcgtgatttcatcatctaagtgtggtggtttgttgttcgccgtcttttgcgg 10359597  T
Q  569 tgttgtttgat 579  Q
    |||||||||||    
T  10359596 tgttgtttgat 10359586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 373 - 579
Target Start/End: Original strand, 21089995 - 21090202
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtg-tggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctata 471  Q
    |||||||||||||||||||||||||||| || | ||| |||| | ||||||||||||||| ||||| || ||||||||||||||||||||||||||| ||    
T  21089995 ttttctctctctaggttttctcttctagtttcttcattgagggggtggttttgggtcaatctttgatctgaaatcactcatcttcatctttttctctcta 21090094  T
Q  472 tttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgt 571  Q
    ||||||| ||||||||||||||||||||| || ||||||||||||| |||||||||| |||||| | |||||||||||||||||||||||||| ||  ||    
T  21090095 tttcaatataaataagtgattttcacatagatttaggttttttcttcgtgatttcatcatctaaatatggtggtttgttgttcgtcgtcttgtacgacgt 21090194  T
Q  572 tgtttgat 579  Q
    ||||||||    
T  21090195 tgtttgat 21090202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 360 - 579
Target Start/End: Original strand, 25273705 - 25273933
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc 459  Q
    |||||| || || |||||||||||||| |||||||||  || || ||||| |||| |||||||||| |||||| ||||||| ||||||| | ||||||||    
T  25273705 aagccggccctagttttctctctctagattttctcttacagtttctccattgaggggtggttttggatcaattcttgacctgaaatcacccctcttcatc 25273804  T
Q  460 tt-----tttctctatatttcaatctaaataagtgattttcacatatatctaggtttt----ttctttgtgatttcataatctaagtgtggtggtttgtt 550  Q
    ||     ||||||| ||||||||||||||||||||||||||||||| |||||||||||    |||||||||||||||| |||||||||||||||||||||    
T  25273805 ttcatcttttctctctatttcaatctaaataagtgattttcacatagatctaggttttttttttctttgtgatttcatcatctaagtgtggtggtttgtt 25273904  T
Q  551 gttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||||||| ||||||||||    
T  25273905 gttcgtcgtcttgtgcggcgttgtttgat 25273933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 378 - 576
Target Start/End: Complemental strand, 38706951 - 38706752
Alignment:
Q  378 tctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaa 477  Q
    |||||||||||||| ||||   | || | ||| |||| ||||||||||||||||| |||| |||||||||| | ||||||||||||||||| ||||||||    
T  38706951 tctctctaggttttttcttactgtttcttcattgaggggtggttttgggtcaattcttgatctaaaatcacccttcttcatctttttctctctatttcaa 38706852  T
Q  478 tctaaataagtgattttcacatatatctagg-ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgttt 576  Q
    ||||||||||||||||||||||| || |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||    
T  38706851 tctaaataagtgattttcacatagatttaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgttgttt 38706752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 360 - 577
Target Start/End: Original strand, 56194426 - 56194649
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtgg---ttttgggtcaatttttgacctaaaatcactcatcttc 456  Q
    ||||||||| ||||||| ||||||||||||||||| ||  | || | ||| |||| ||||   ||||||||||||| ||||||| ||||||  | |||||    
T  56194426 aagccgaccttaattttttctctctaggttttctcatcccgtttcttcattgaggggtggtggttttgggtcaattcttgacctgaaatcaaacctcttc 56194525  T
Q  457 atctttttctctatatttcaatctaaataagtgattttcacatatatctagg---ttttttctttgtgatttcataatctaagtgtggtggtttgttgtt 553  Q
    |||||||||||| ||||||||||||||||||||| ||||||||| |||||||   |||||||||||||||||||| ||||||||||||||||||||||||    
T  56194526 atctttttctctctatttcaatctaaataagtgactttcacatagatctaggtttttttttctttgtgatttcatcatctaagtgtggtggtttgttgtt 56194625  T
Q  554 cgtcgtcttgtgcggtgttgtttg 577  Q
    ||||||||||||||| ||||||||    
T  56194626 cgtcgtcttgtgcggcgttgtttg 56194649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 378 - 564
Target Start/End: Complemental strand, 34024677 - 34024491
Alignment:
Q  378 tctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaa 477  Q
    ||||||||| |||| |||| ||| || | ||| |||| |||||||||| |||||| ||||||| ||||||| | ||||||||||||||||| ||||||||    
T  34024677 tctctctagattttttcttttagtttcttcattgaggggtggttttggatcaattcttgacctgaaatcacccctcttcatctttttctctctatttcaa 34024578  T
Q  478 tctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgt 564  Q
    ||||||||||| ||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  34024577 tctaaataagttattttcacatagatctaggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgt 34024491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 360 - 579
Target Start/End: Complemental strand, 53616910 - 53616689
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc 459  Q
    |||||| || |||||||||||||||||||||||||||  |  || | | | |||| |||  |||||||||||| ||||||| |||||||   ||||||||    
T  53616910 aagccggccctaattttctctctctaggttttctcttacaatttcttcgttgaggggtgactttgggtcaattcttgacctgaaatcaccactcttcatc 53616811  T
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatctaggtt--ttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtc 557  Q
     |||||||| ||||||||||||||||||||||||||||||| |||||||||  |||||||||| ||||||| |||||||||||||| |||||||||||||    
T  53616810 gttttctctttatttcaatctaaataagtgattttcacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtc 53616711  T
Q  558 gtcttgtgcggtgttgtttgat 579  Q
    ||||||||||| ||||||||||    
T  53616710 gtcttgtgcggcgttgtttgat 53616689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 373 - 579
Target Start/End: Complemental strand, 9529124 - 9528916
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    |||| ||||| |||||||||||||  || || | ||  |||| ||||||||||||||||| ||||||| ||||||| | |||| |||||||||||| |||    
T  9529124 ttttatctctttaggttttctcttacagtttcttcactgaggggtggttttgggtcaattcttgacctgaaatcacccctctttatctttttctctttat 9529025  T
Q  473 ttcaatctaaataagtgattttcacatatatctagg--ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtg 570  Q
    |||||||||||||||||||||||||||| || || |  |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |    
T  9529024 ttcaatctaaataagtgattttcacatagatttatgttttttttctttgtgatttcatcatctaagtgtgatggtttgttgttcgtcgtcttgtgcggcg 9528925  T
Q  571 ttgtttgat 579  Q
    |||||||||    
T  9528924 ttgtttgat 9528916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 370 - 579
Target Start/End: Complemental strand, 31381920 - 31381711
Alignment:
Q  370 taattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctcta 469  Q
    ||||||||||||||||| |||||||||   | || | | | || | ||||||||||||||||| ||||||| ||||||| | |  ||||||||||||||     
T  31381920 taattttctctctctagattttctcttacggtttcttcgttgatgggtggttttgggtcaattcttgacctgaaatcaccccttctcatctttttctctc 31381821  T
Q  470 tatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggt 569  Q
    | ||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |     
T  31381820 tttttcaatttaaataagtgattttcacatagatctaagttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagc 31381721  T
Q  570 gttgtttgat 579  Q
    ||||||||||    
T  31381720 gttgtttgat 31381711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 373 - 579
Target Start/End: Complemental strand, 2115834 - 2115627
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    |||||||||||||| |||| ||||  |  || | ||| |||| ||||||||||||||||| ||||||| ||||||||  ||||||||||||||||| |||    
T  2115834 ttttctctctctagattttttcttacaatttattcattgaggggtggttttgggtcaattattgacctgaaatcacttttcttcatctttttctctttat 2115735  T
Q  473 ttcaatctaaataagtgattttcacatatatctagg--ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtg 570  Q
    |||||||||||||||||||||||||||| || ||||  |||||||||||| ||||||| |||||||||||||| ||||||||| |||||||||||| |||    
T  2115734 ttcaatctaaataagtgattttcacatagatttaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgtttgtcgtcttgtgc-gtg 2115636  T
Q  571 ttgtttgat 579  Q
    |||||||||    
T  2115635 ttgtttgat 2115627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 360 - 579
Target Start/End: Original strand, 867987 - 868212
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc 459  Q
    |||||| || || ||||||||||||||||||||||||| || || | ||| |||| |||||||| |||| ||| ||||| | ||||||| | ||||||||    
T  867987 aagccggccctagttttctctctctaggttttctcttccagtttcttcattgaggggtggttttaggtcgattcttgacatgaaatcacccctcttcatc 868086  T
Q  460 tttttctctatatttcaa-------tctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgt 552  Q
    ||||||||| ||||||||       ||||||||||| ||||||||||| |||||| |||| ||||||||||||||| |||||||||||||||||||||||    
T  868087 tttttctctctatttcaaatttcaatctaaataagttattttcacatagatctagatttt-tctttgtgatttcatcatctaagtgtggtggtttgttgt 868185  T
Q  553 tcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||||| ||||||||||    
T  868186 tcgtcgtcttgtgcggcgttgtttgat 868212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 373 - 579
Target Start/End: Original strand, 4643699 - 4643908
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactca--tcttcatctttttctctat 470  Q
    |||||||| |||||||||||||||  ||  | | ||| |||| |||||||| ||| |||||||||||| ||||||| |   ||||||||||||||||| |    
T  4643699 ttttctctttctaggttttctcttacagtctcttcattgaggggtggttttaggtgaatttttgacctgaaatcacccccctcttcatctttttctctct 4643798  T
Q  471 atttcaatctaaataagtgattttcacatatatctaggtttt--ttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
    ||||||||||||||||||||||| |||||| |||||| ||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  4643799 atttcaatctaaataagtgattt-cacatagatctagattttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 4643897  T
Q  569 tgttgtttgat 579  Q
     ||||||||||    
T  4643898 cgttgtttgat 4643908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 360 - 579
Target Start/End: Complemental strand, 9645808 - 9645588
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc 459  Q
    |||||| || || |||||| |||||||| ||| ||||  || || | ||| |||| || |||||||||||||| ||||||| | ||||| | ||||||||    
T  9645808 aagccggccctagttttctttctctaggctttatcttacagtttcttcattgaggggtcgttttgggtcaattcttgacctgatatcacccctcttcatc 9645709  T
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatctaggtt-ttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcg 558  Q
    ||||| ||| ||||||||||||||||||||| ||||||||| ||||||||| ||||||||| |||||||| |||||||||||||||| ||||||||||||    
T  9645708 tttttgtctctatttcaatctaaataagtgactttcacatagatctaggtttttttctttgcgatttcatcatctaagtgtggtggtgtgttgttcgtcg 9645609  T
Q  559 tcttgtgcggtgttgtttgat 579  Q
    |||||||||| ||||||||||    
T  9645608 tcttgtgcggcgttgtttgat 9645588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 452 - 579
Target Start/End: Complemental strand, 8009526 - 8009400
Alignment:
Q  452 tcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttg 551  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  8009526 tcttcatctttttctctctatttcaatctaaataagtgattttcacatagatctag-ttttttctttgtgatttcatcatctaagtgtggtggtttgttg 8009428  T
Q  552 ttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||||||||||||| ||||||||||    
T  8009427 ttcgtcgtcttgtgcggcgttgtttgat 8009400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 373 - 579
Target Start/End: Original strand, 1531749 - 1531958
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttt-tctctata 471  Q
    |||||||| |||||||||||||||  || || | ||| |||| ||||| ||||||||||| ||||||| ||||||| | |||| ||||||| ||||| ||    
T  1531749 ttttctctttctaggttttctcttacagtttcttcattgaggggtggtattgggtcaattcttgacctgaaatcacccctctttatcttttctctctcta 1531848  T
Q  472 tttcaatctaaataagtgattttcacatatatctaggtttt--ttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggt 569  Q
    ||||||||||||||||||||||||||||| |||||| ||||  |||||||||||||||| |||||||||||||||||||||||  ||||||||||| ||     
T  1531849 tttcaatctaaataagtgattttcacatagatctagattttttttctttgtgatttcatcatctaagtgtggtggtttgttgtctgtcgtcttgtgtggc 1531948  T
Q  570 gttgtttgat 579  Q
    ||||||||||    
T  1531949 gttgtttgat 1531958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 360 - 577
Target Start/End: Original strand, 6972640 - 6972858
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc 459  Q
    |||||| || |||||||||||||||||||||| |||||  | || | ||| | || ||||||||||||||||| |||| || |||||||   ||||||||    
T  6972640 aagccggccctaattttctctctctaggttttttcttccggtttcttcattgggg-gtggttttgggtcaattcttgatctgaaatcacctctcttcatc 6972738  T
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatctaggtttt--ttctttgtgatttcataatctaagtgtggtggtttgttgttcgtc 557  Q
    ||||| ||| ||||||||||||||||||||| ||| ||||| ||| | |||||  |||||||||||||||| ||||||||||||||||||||||||||||    
T  6972739 tttttatctgtatttcaatctaaataagtgacttttacatagatccatgttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtc 6972838  T
Q  558 gtcttgtgcggtgttgtttg 577  Q
    ||||||||||| ||||||||    
T  6972839 gtcttgtgcggcgttgtttg 6972858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 380 - 579
Target Start/End: Complemental strand, 35965214 - 35965014
Alignment:
Q  380 tctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatc 479  Q
    |||||||||||||||||| ||||| | ||| |||| |||||||||||||||||||| |||| |||||||   ||||||||||||||||| ||||||||||    
T  35965214 tctctaggttttctcttccagattcttcattgaggggtggttttgggtcaattttttacctgaaatcacctctcttcatctttttctctctatttcaatc 35965115  T
Q  480 taaataagtga-ttttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttga 578  Q
    | ||||||||| |||||||||| ||||||||||||| || |||||||| | |||  ||||||||||| |||||||||||||| |||| || |||||||||    
T  35965114 tgaataagtgatttttcacatagatctaggtttttttttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcctgtgtggcgttgtttga 35965015  T
Q  579 t 579  Q
    |    
T  35965014 t 35965014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 373 - 579
Target Start/End: Original strand, 9283754 - 9283961
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    ||||||||||||||||| ||||||  |  || | ||| |||| ||||||||||||||||  || |||| ||||||| | |||||||| |||||||| |||    
T  9283754 ttttctctctctaggttatctcttacaatttcttcattgaggggtggttttgggtcaatacttaacctgaaatcacccctcttcatcgttttctctttat 9283853  T
Q  473 ttcaatctaaataagtgattttcacatatatctagg-ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgt 571  Q
    |||||||||||||||||||||| ||||| ||||||| |||||| ||||| ||||||| |||||||||||||| ||||||||| ||||||||||| || ||    
T  9283854 ttcaatctaaataagtgatttttacatagatctaggtttttttatttgtaatttcatcatctaagtgtggtgatttgttgtttgtcgtcttgtgtggcgt 9283953  T
Q  572 tgtttgat 579  Q
    ||||||||    
T  9283954 tgtttgat 9283961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 416 - 579
Target Start/End: Original strand, 20569138 - 20569305
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctagg----ttt 511  Q
    ||||||||||||||||| || |||| ||||||| | ||||||| ||||||||| ||||||||||||||||| ||||||||||||| |||||||    |||    
T  20569138 gtggttttgggtcaattcttaacctgaaatcacccctcttcatttttttctctttatttcaatctaaataaatgattttcacatagatctaggttttttt 20569237  T
Q  512 tttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||| | ||||||| |||||||||||||| |||||||||||||||||| ||||| ||||||||||    
T  20569238 tttctttataatttcatcatctaagtgtggtgatttgttgttcgtcgtcttctgcggggttgtttgat 20569305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 378 - 579
Target Start/End: Original strand, 35261036 - 35261241
Alignment:
Q  378 tctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatca----ctcatcttcatctttttc-tctatat 472  Q
    ||||||||||||||||||||| | || | ||| |||| ||| ||||||||||||||||||||| |||| |    | | |||||||||||||| ||| |||    
T  35261036 tctctctaggttttctcttctcgtttcttcattgagg-gtgattttgggtcaatttttgacctgaaataatcatcccctcttcatctttttcctctttat 35261134  T
Q  473 ttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgtt 572  Q
    | |||||||||||||||||||||||||| || ||||||||||||| ||||||| || |||||||||||||||| ||||||| |||||||| ||||| |||    
T  35261135 tgcaatctaaataagtgattttcacatagatttaggttttttcttcgtgatttgatcatctaagtgtggtggtgtgttgtttgtcgtcttctgcggcgtt 35261234  T
Q  573 gtttgat 579  Q
    |||||||    
T  35261235 gtttgat 35261241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 373 - 579
Target Start/End: Complemental strand, 43154266 - 43154053
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    |||||||||| |||||||| ||||  |  || ||||| |||  ||||||||||||||||| ||||| | ||||||| | |||||||||||| |||| |||    
T  43154266 ttttctctctttaggttttatcttacaatttatccattgagaggtggttttgggtcaattcttgacttgaaatcacccctcttcatctttt-ctctctat 43154168  T
Q  473 ttcaatctaaataagtgattttcacatatatctaggtt--------ttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgt 564  Q
    |||||||||||||||||||||||||||| |||||||||        ||||||||||||||| || || ||||||||||||||||||||||||||||||||    
T  43154167 ttcaatctaaataagtgattttcacatagatctaggtttttttgttttttctttgtgattttatcatttaagtgtggtggtttgttgttcgtcgtcttgt 43154068  T
Q  565 gcggtgttgtttgat 579  Q
    | || ||||||||||    
T  43154067 gtggcgttgtttgat 43154053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 401 - 579
Target Start/End: Complemental strand, 18139131 - 18138952
Alignment:
Q  401 attttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgatttt-cacat 499  Q
    ||||| ||| |||| ||| |||| ||| ||||||||||||  |||||| | |||||||| |||||||| ||||||||||||||||||||||||| |||||    
T  18139131 atttttcattgaggggtgattttaggtaaatttttgacctggaatcacacctcttcatcattttctctctatttcaatctaaataagtgatttttcacat 18139032  T
Q  500 atatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    | ||||||||||||||||  ||||||| | | || ||||||||||| |||||||||||||||||||||| ||||||||||    
T  18139031 acatctaggttttttcttaatgatttcgtcacctgagtgtggtggtgtgttgttcgtcgtcttgtgcggcgttgtttgat 18138952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 401 - 579
Target Start/End: Complemental strand, 49126344 - 49126165
Alignment:
Q  401 attttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgatttt-cacat 499  Q
    ||||| ||| |||| ||| |||| ||| ||||||||||||  |||||| | |||||||| |||||||| ||||||||||||||||||||||||| |||||    
T  49126344 atttttcattgaggggtgattttaggtaaatttttgacctggaatcacacctcttcatcattttctctctatttcaatctaaataagtgatttttcacat 49126245  T
Q  500 atatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    | ||||||||||||||||  ||||||| | | || ||||||||||| |||||||||||||||||||||| ||||||||||    
T  49126244 acatctaggttttttcttaatgatttcgtcacctgagtgtggtggtgtgttgttcgtcgtcttgtgcggcgttgtttgat 49126165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 360 - 579
Target Start/End: Original strand, 2624327 - 2624546
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc 459  Q
    |||||| || || |||| ||||||||||||||||||||||| || |  || |||| ||| ||||||||  ||||||||||| |||| ||||||| |||||    
T  2624327 aagccggccctagttttttctctctaggttttctcttctagtttctttattgaggggtgattttgggttgatttttgacctgaaataactcatcatcatc 2624426  T
Q  460 tttttct-ctatatttcaatctaaataagtgattttcacatatatctagg-ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtc 557  Q
    ||||| |  | ||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||| | |  | ||||||||||| |||||||||||    
T  2624427 tttttatagtctatttcaatctaaataagtgattttcacatagatctaggtttttttcttcgtgatttcgtca--tgagtgtggtggtgtgttgttcgtc 2624524  T
Q  558 gtcttgtgcggtgttgtttgat 579  Q
    ||||||||||| || |||||||    
T  2624525 gtcttgtgcggcgtagtttgat 2624546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 416 - 579
Target Start/End: Complemental strand, 50766712 - 50766551
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatct-aggtttttt 514  Q
    ||||||||||||||||| |||| || ||||||  | ||||||||||||||||| ||||||||||||||||| ||||||||||||| |||| || ||||||    
T  50766712 gtggttttgggtcaattcttgatctgaaatcatccctcttcatctttttctctttatttcaatctaaataaatgattttcacatagatctaagttttttt 50766613  T
Q  515 ctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||| ||||||| |||||||||||||| ||||||||   ||||||||||||| ||||||||||    
T  50766612 ctttgtaatttcatcatctaagtgtggtgatttgttgt---tcgtcttgtgcggcgttgtttgat 50766551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 461 - 579
Target Start/End: Original strand, 29965565 - 29965685
Alignment:
Q  461 ttttctctatatttcaatctaaataagtgattttcacatatatctaggtttt--ttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcg 558  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||  |||||||| ||||||| |||||||||||||| ||||||||||||||    
T  29965565 ttttctctttatttcaatctaaataagtgattttcacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcg 29965664  T
Q  559 tcttgtgcggtgttgtttgat 579  Q
    |||||||||| ||||||||||    
T  29965665 tcttgtgcggcgttgtttgat 29965685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 420 - 579
Target Start/End: Original strand, 12265345 - 12265504
Alignment:
Q  420 ttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtga-ttttcacatatatctaggttttttcttt 518  Q
    |||| |||||||||||||||| ||||||| | ||||||||||||| ||  ||||||||||||||||||||| |||||||||| ||||||||||| |||      
T  12265345 tttttggtcaatttttgacctgaaatcacccctcttcatctttttatccctatttcaatctaaataagtgatttttcacatagatctaggttttctctac 12265444  T
Q  519 gtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||  | |||| ||||||| |||||||||||||||||| ||||||| ||||||||||    
T  12265445 gtgattttgtcatctgagtgtggcggtttgttgttcgtcgtc-tgtgcggcgttgtttgat 12265504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 456 - 579
Target Start/End: Original strand, 14183729 - 14183852
Alignment:
Q  456 catctttttctctatatttcaatctaaataagtgattttcacatatatctaggtttt-ttctttgtgatttcataatctaagtgtggtggtttgttgttc 554  Q
    ||||||||||||| |||||||||||||||||||||||||||||   ||||| ||||| |||||||||||||||  |||||||||||||||||||||||||    
T  14183729 catctttttctctctatttcaatctaaataagtgattttcacaaggatctaagtttttttctttgtgatttcaccatctaagtgtggtggtttgttgttc 14183828  T
Q  555 gtcgtcttgtgcggtgttgtttgat 579  Q
    || ||||||||| ||||||||||||    
T  14183829 gtagtcttgtgc-gtgttgtttgat 14183852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 452 - 579
Target Start/End: Original strand, 49680459 - 49680591
Alignment:
Q  452 tcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctagg-----ttttttctttgtgatttcataatctaagtgtggtggtt 546  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||  |||||||     |||||||||||| ||||||| |||||||||||||| ||    
T  49680459 tcttcatctttttctctttatttcaatccaaataagtgattttcacatggatctaggtttttttttttctttgtaatttcatcatctaagtgtggtgatt 49680558  T
Q  547 tgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||| ||||||||||||||  ||||||||||||    
T  49680559 tgttattcgtcgtcttgtgttgtgttgtttgat 49680591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 452 - 579
Target Start/End: Complemental strand, 32952913 - 32952788
Alignment:
Q  452 tcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttg 551  Q
    ||||||||||||||||| ||||||||  |||||||||| |||||||||| ||||| ||||||||||||||||||| | ||||||||||| |||| |||||    
T  32952913 tcttcatctttttctctctatttcaaattaaataagtgtttttcacatagatcta-gttttttctttgtgatttcgtcatctaagtgtgttggtgtgttg 32952815  T
Q  552 ttcgtcgtcttgtgcggtgttgtttgat 579  Q
    || |||||||| ||||| ||||||||||    
T  32952814 tttgtcgtcttatgcgg-gttgtttgat 32952788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 373 - 579
Target Start/End: Original strand, 44947246 - 44947462
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatct-----tca-tctttttct 466  Q
    ||||||||||||| ||||||||||  || || | ||| |||| ||||||||||||||||| ||||||| |||||||   |||     ||  ||| | |||    
T  44947246 ttttctctctctaagttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatcacctctctctctctctctctctctct 44947345  T
Q  467 ctatatttcaatctaaataagtgattttcacatatatctaggtttt----ttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtctt 562  Q
    || | | |||||||||||||||||||||| |||| |||||||||||    |||||||||||||||| |||||||||||||||||||||| | || |||||    
T  44947346 ctctctctcaatctaaataagtgattttcgcatagatctaggttttttttttctttgtgatttcattatctaagtgtggtggtttgttggttgttgtctt 44947445  T
Q  563 gtgcggtgttgtttgat 579  Q
    |||||| ||||||||||    
T  44947446 gtgcggcgttgtttgat 44947462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 373 - 564
Target Start/End: Complemental strand, 1931949 - 1931770
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    |||| ||||| ||||||||||||||||| || | ||| |||  ||||||| |||||||| ||| |||| ||||||||||||||||||||||||||||       
T  1931949 ttttttctctttaggttttctcttctagtttcttcattgagaggtggtttcgggtcaatatttaacctgaaatcactcatcttcatctttttctcta--- 1931853  T
Q  473 ttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgt 564  Q
             ||||||| ||||||||| | |||||||||||||| |||||||||||| |||||||||| ||||| ||||||||  ||||||||    
T  1931852 ---------aataagttattttcacaaagatctaggttttttcattgtgatttcatcatctaagtgtagtggtgtgttgttcaccgtcttgt 1931770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 382 - 526
Target Start/End: Original strand, 47416736 - 47416881
Alignment:
Q  382 tctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatcta 481  Q
    |||||||||||||||  |  || | ||| |||| ||| ||||||||||||| ||||| | ||||||| | ||||||||||||||||| ||||||||||||    
T  47416736 tctaggttttctcttacaatttcttcattgaggggtgattttgggtcaattattgacttgaaatcacccctcttcatctttttctctttatttcaatcta 47416835  T
Q  482 aataagtgattttcacatatatct-aggttttttctttgtgatttc 526  Q
    ||||||||||||||||||| |||| || |||||||||||| |||||    
T  47416836 aataagtgattttcacatagatctaagtttttttctttgtaatttc 47416881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 420 - 579
Target Start/End: Complemental strand, 46991329 - 46991169
Alignment:
Q  420 ttttgggtcaatttttgacctaaaatcactcatcttcatctttt---tctctatatttcaatctaaataagtgattttcacatatatctag-gttttttc 515  Q
    |||||||||||||||||||   ||||||||||||||||| ||||   ||||| ||||||||||||||| ||||||||||||||| ||||||  |||||||    
T  46991329 ttttgggtcaatttttgac---aaatcactcatcttcatattttatttctctctatttcaatctaaatgagtgattttcacatagatctagatttttttc 46991233  T
Q  516 tttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||  ||||||  | |||| ||||||||||| ||||||| |||||||| || || ||||||||||    
T  46991232 ttcatgattttgtcatctgagtgtggtggtgtgttgtttgtcgtcttctgtggcgttgtttgat 46991169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 360 - 524
Target Start/End: Original strand, 1008124 - 1008289
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtg-tggttttgggtcaatttttgacctaaaatcactcatcttcat 458  Q
    ||||||||| || |||||||||||| |||| ||||||| |   | | |||||||  | || |||||| ||||| |||||| | ||||||||||||| |||    
T  1008124 aagccgaccttagttttctctctcttggttctctcttccatcatcttcatcgagtagatgattttggatcaatatttgacttgaaatcactcatctgcat 1008223  T
Q  459 ctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatt 524  Q
    |||||||||| ||||| ||||||||||||||||||||||||| || ||| ||||||||| ||||||    
T  1008224 ctttttctctctattttaatctaaataagtgattttcacataaatttagtttttttcttcgtgatt 1008289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 420 - 494
Target Start/End: Complemental strand, 5333658 - 5333584
Alignment:
Q  420 ttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgatttt 494  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||| |||||||||||||||    
T  5333658 ttttgggtcaatttttgacctgaaatcacacatcttcatctttttctctctatttcaatataaataagtgatttt 5333584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 471 - 568
Target Start/End: Complemental strand, 3336304 - 3336207
Alignment:
Q  471 atttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
    ||||||||||||| |||| |||||||||| ||||||||||||||||| |||||||  | |||| ||||||||||| |||||||||||||| |||||||    
T  3336304 atttcaatctaaacaagttattttcacatctatctaggttttttcttcgtgattttgtcatctgagtgtggtggtgtgttgttcgtcgtcctgtgcgg 3336207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 360 - 494
Target Start/End: Complemental strand, 5333787 - 5333656
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc 459  Q
    |||||| || ||||||| ||||||||||||||||||||  | || | ||| | ||||  |||||||||||||||||||| | ||||||| | ||||||||    
T  5333787 aagccggccctaattttttctctctaggttttctcttcccgtttcttcattggggtg--gttttgggtcaatttttgacatgaaatcaccc-tcttcatc 5333691  T
Q  460 tttttctctatatttcaatctaaataagtgatttt 494  Q
    ||||||||| ||||||||| |||||||||||||||    
T  5333690 tttttctctctatttcaatataaataagtgatttt 5333656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 360 - 518
Target Start/End: Complemental strand, 49073018 - 49072858
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgagg-tgtggttttgggtcaatttttgacctaaaatcactc-atcttca 457  Q
    ||||||||| |||||||||||||||| ||| | | |||||  || | ||| |||| |||||||||| |||||||||||||| |||||| | | |  ||||    
T  49073018 aagccgaccttaattttctctctctaagttatattttctattttcttcatagaggatgtggttttgcgtcaatttttgacccaaaatctccctaatttca 49072919  T
Q  458 tctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttcttt 518  Q
    | ||||||||| |||||||||||| |||||||||||||||||| || ||  ||||||||||    
T  49072918 tatttttctctttatttcaatctatataagtgattttcacatagatttatattttttcttt 49072858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 379 - 567
Target Start/End: Complemental strand, 27594076 - 27593878
Alignment:
Q  379 ctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaat 478  Q
    ||||||||||||||||||| |  | ||| || || | ||| |||| |||||||||||||| | ||||||| | |||||||||||||||||||||||||||    
T  27594076 ctctctaggttttctcttccacttcttc-attgatgggtgattttaggtcaatttttgacatgaaatcaccc-tcttcatctttttctctatatttcaat 27593979  T
Q  479 ctaaataag------------tgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgc 566  Q
    |||||||||             ||| |||||||| |||||  ||||||||| |||||||| | |||| ||||||||||| ||||||||||| ||||||||    
T  27593978 ctaaataagcgagtttcacatagatcttcacatagatctatattttttcttcgtgatttcgttatctgagtgtggtggtgtgttgttcgtcatcttgtgc 27593879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 442 - 528
Target Start/End: Complemental strand, 35351337 - 35351251
Alignment:
Q  442 aaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcat 528  Q
    ||||||| |||||||||| ||||| || ||||||||| |||||||||||| |||||||| |||||||||||||||  ||||||||||    
T  35351337 aaatcacacatcttcatccttttcgctttatttcaatttaaataagtgatattcacatagatctaggttttttctacgtgatttcat 35351251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 425 - 579
Target Start/End: Original strand, 27651823 - 27651978
Alignment:
Q  425 ggtcaatttttgacctaaaatcactcatcttcatctttttctctatat--ttcaatctaaataagtgattttcacatatatctaggttttttcttt-gtg 521  Q
    |||||||||||||||||  ||||| ||||| |||||||||  | || |  |||||||||||||||||||||||||||| ||| ||  ||||||||| |||    
T  27651823 ggtcaatttttgacctaggatcacccatctgcatcttttttcccatttctttcaatctaaataagtgattttcacatacatcaag--tttttctttcgtg 27651920  T
Q  522 atttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||| |  ||| ||||    | | |||||||||||||||||||||||||||||||||    
T  27651921 atttcgtcgtcttagtgcaacgttgtgttgttcgtcgtcttgtgcggtgttgtttgat 27651978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 432 - 526
Target Start/End: Complemental strand, 21554995 - 21554901
Alignment:
Q  432 ttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttc 526  Q
    |||| |||| ||||||| |||||| |||||||| | | ||||||| || |||||||||||||||||||| |||||| | ||||||||||||||||    
T  21554995 tttttacctgaaatcacgcatcttaatctttttatatttatttcattcgaaataagtgattttcacataaatctagatattttctttgtgatttc 21554901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 364 - 457
Target Start/End: Original strand, 50179605 - 50179698
Alignment:
Q  364 cgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttca 457  Q
    ||||| || |||||||||||||| |||||||||  || || ||||| |||| ||||||||||||||||| || |||| ||||||||||||||||    
T  50179605 cgaccatagttttctctctctagcttttctcttacagtttctccattgaggggtggttttgggtcaattcttaacctgaaatcactcatcttca 50179698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 416 - 504
Target Start/End: Original strand, 36161580 - 36161668
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatc 504  Q
    |||||||| ||||| ||||||||||| |||||| ||||| ||| |||| |  | | ||||||||||||||||||||||| |||||||||    
T  36161580 gtggttttaggtcattttttgacctagaatcacccatctgcattttttcccatttctttcaatctaaataagtgatttttacatatatc 36161668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 427 - 579
Target Start/End: Original strand, 36194590 - 36194743
Alignment:
Q  427 tcaatttttgacctaaaatcactcatcttcatcttttt-ctc-tatatttcaatctaaataagtgattttcacatatatctaggttttttcttt-gtgat 523  Q
    |||||||||||||||||| ||  | ||| ||||||||| ||| | | ||||||| ||||||||||||||||||||| ||| ||  ||||||||| |||||    
T  36194590 tcaatttttgacctaaaaacatccctctgcatcttttttctcctttctttcaatttaaataagtgattttcacatacatcaag--tttttctttcgtgat 36194687  T
Q  524 ttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||| |  ||| |||| |  | | |||||||||||||||||||||| ||||||||||    
T  36194688 ttcgttgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgat 36194743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 419 - 514
Target Start/End: Complemental strand, 41255579 - 41255485
Alignment:
Q  419 gttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggtttttt 514  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||   ||||| | ||| || | |||||||||||||| || ||||||||||    
T  41255579 gttttgggtcaatttttgacctaaaatcatcaatcttcatctttttctacctattt-actcttaacacgtgattttcacataaatttaggtttttt 41255485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 524 - 579
Target Start/End: Original strand, 47417657 - 47417712
Alignment:
Q  524 ttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||| |||||| ||||||| |||||||||||||||||||||||| ||||||||||    
T  47417657 ttcatcatctaaatgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgat 47417712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 416 - 466
Target Start/End: Complemental strand, 3338866 - 3338816
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttct 466  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||    
T  3338866 gtggttttgggtcaatttttgacctaaaatcatcaatcttcatctttttct 3338816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 502
Target Start/End: Complemental strand, 9165286 - 9165196
Alignment:
Q  416 gtggttttgggtca-atttttgacctaaaatcactcatcttcatctttttctc---tatatttcaatctaaataagtgattttcacatata 502  Q
    |||||||| ||||| |||||| ||||| |||||| | ||| ||||||||||||   ||| |||||||||||||||||| ||||||||||||    
T  9165286 gtggttttaggtcatattttttacctagaatcacccctctacatctttttctcccttatctttcaatctaaataagtggttttcacatata 9165196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 411 - 504
Target Start/End: Original strand, 22300706 - 22300801
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcat-ctttttctc-tatatttcaatctaaataagtgattttcacatatatc 504  Q
    |||| |||||||| ||||| |||||||||||||||||| | | | ||| ||||||||| | | ||||||| |||||||||||||||||| ||||||    
T  22300706 gaggagtggttttaggtcattttttgacctaaaatcacccctttgcatcctttttctcttttctttcaatttaaataagtgattttcacgtatatc 22300801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 421 - 521
Target Start/End: Original strand, 36184335 - 36184437
Alignment:
Q  421 tttgggtcaatttttgacctaaaatca-ctcatcttcatctttttc-tctat-atttcaatctaaataagtgattttcacatatatctaggttttttctt 517  Q
    |||||||||||| |||| ||||||||| ||| |||||||||||||  ||| | |||||||| |||||||||||||| || | ||||||| ||||||||||    
T  36184335 tttgggtcaattattgatctaaaatcatctc-tcttcatcttttttatctctcatttcaatttaaataagtgatttccatacatatctatgttttttctt 36184433  T
Q  518 tgtg 521  Q
    ||||    
T  36184434 tgtg 36184437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 533 - 576
Target Start/End: Complemental strand, 45228126 - 45228083
Alignment:
Q  533 taagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgttt 576  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||    
T  45228126 taagtgtggtggtttgttgttcgccgtcttgtgcggtattgttt 45228083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 470 - 504
Target Start/End: Original strand, 52978747 - 52978781
Alignment:
Q  470 tatttcaatctaaataagtgattttcacatatatc 504  Q
    |||||||||||||||||||||||||||||||||||    
T  52978747 tatttcaatctaaataagtgattttcacatatatc 52978781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 416 - 504
Target Start/End: Original strand, 9643244 - 9643337
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatcttttt-----ctctatatttcaatctaaataagtgattttcacatatatc 504  Q
    ||||||||  |||| ||||||||||| |||||||||||| |||||||||     |  | | |||| ||||||||||||||||||||||||||||    
T  9643244 gtggttttatgtcattttttgacctagaatcactcatctgcatctttttttttcccatttctttcgatctaaataagtgattttcacatatatc 9643337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 416 - 504
Target Start/End: Original strand, 43510065 - 43510156
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctc---tatatttcaatctaaataagtgattttcacatatatc 504  Q
    |||||||| ||||| ||||||||||| |||||||| ||| ||||||||| ||   | | ||||||||||||||||||  |||||||| ||||    
T  43510065 gtggttttaggtcattttttgacctagaatcactcctctacatctttttttcccttttctttcaatctaaataagtggctttcacatttatc 43510156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 538 - 579
Target Start/End: Original strand, 49410232 - 49410273
Alignment:
Q  538 gtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||||||||||||||||||||||||| | ||||||||||    
T  49410232 gtggtggtttgttgttcgtcgtcttgtgcagcgttgtttgat 49410273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 414 - 494
Target Start/End: Complemental strand, 52098125 - 52098044
Alignment:
Q  414 gtgtggttttgggtcaatttttgacctaaaatcac-tcatcttcatctttttctctatatttcaatctaaataagtgatttt 494  Q
    |||||||||| | |||||||||||  | ||||||| | || |||||| |||||||  |||||||||||||||||||||||||    
T  52098125 gtgtggttttagatcaatttttgatttgaaatcaccttatgttcatccttttctccctatttcaatctaaataagtgatttt 52098044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 472 - 568
Target Start/End: Complemental strand, 56040828 - 56040725
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatctaggttttttc-------tttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgt 564  Q
    |||||||||||||||||| ||||||||| |||| || |||||||       ||||||||||| |  | |||||| || | ||||||||||||||||||||    
T  56040828 tttcaatctaaataagtggttttcacatctatcaagtttttttcttgtgtttttgtgatttcgtcgtttaagtgcggcgttttgttgttcgtcgtcttgt 56040729  T
Q  565 gcgg 568  Q
    ||||    
T  56040728 gcgg 56040725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 502
Target Start/End: Original strand, 9178218 - 9178312
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctc---tatatttcaatctaaataagtgattttcacatata 502  Q
    |||| ||||| || ||||| ||||||||||| |||||| | ||| ||||||||||||   | | ||||||||||||||| || ||||||||||||    
T  9178218 gaggggtggtcttaggtcattttttgacctagaatcacccttctacatctttttctcccttttctttcaatctaaataaatggttttcacatata 9178312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 461
Target Start/End: Complemental strand, 29121920 - 29121876
Alignment:
Q  417 tggttttgggtcaatttttgacctaaaatcactcatcttcatctt 461  Q
    ||||||| ||||| |||||||||||||||||||||||| ||||||    
T  29121920 tggttttaggtcattttttgacctaaaatcactcatctacatctt 29121876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 504
Target Start/End: Original strand, 54021727 - 54021818
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatcttttt--ctctata-tttcaatctaaataagtgattttcacatatatc 504  Q
    |||||||| ||||| |||||||| ||||||||  | ||| |||||||||  |||| |  |||||||||||||||||| ||||||||||||||    
T  54021727 gtggttttaggtcattttttgacataaaatcatccctctacatcttttttcctcttttctttcaatctaaataagtggttttcacatatatc 54021818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 457 - 500
Target Start/End: Original strand, 21405440 - 21405483
Alignment:
Q  457 atctttttctctatatttcaatctaaataagtgattttcacata 500  Q
    ||||||| |||| ||||||||||||| |||||||||||||||||    
T  21405440 atcttttcctctctatttcaatctaattaagtgattttcacata 21405483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 513
Target Start/End: Original strand, 23329094 - 23329153
Alignment:
Q  454 ttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttt 513  Q
    ||||||||||| ||| |||||||| |||||||| |||||||||||||  ||||| |||||    
T  23329094 ttcatctttttatctctatttcaacctaaataactgattttcacatacgtctagtttttt 23329153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 579
Target Start/End: Original strand, 28857377 - 28857440
Alignment:
Q  516 tttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||  |||||||| || | | |||||||||| ||||||||||| ||||||||||    
T  28857377 tttgtgatttcatcgtctaagtgcggcgttgtgttgttcgttgtcttgtgcggcgttgtttgat 28857440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 472 - 518
Target Start/End: Original strand, 9713832 - 9713877
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatctaggttttttcttt 518  Q
    |||||||||||||||||||||| |||||||||| | |||||||||||    
T  9713832 tttcaatctaaataagtgatttccacatatatc-aagttttttcttt 9713877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 470 - 504
Target Start/End: Complemental strand, 29120549 - 29120515
Alignment:
Q  470 tatttcaatctaaataagtgattttcacatatatc 504  Q
    |||||||||||||||||||| ||||||||||||||    
T  29120549 tatttcaatctaaataagtggttttcacatatatc 29120515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 568
Target Start/End: Original strand, 32766380 - 32766544
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctc---tatatttcaatctaaataagtgattttcacatatatctaggtttt 512  Q
    |||||||| ||||| ||||||||||| |||||| | ||| |||||||||  |   | | ||||||||||| |||||| ||||||||| |||| || ||||    
T  32766380 gtggttttaggtcattttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaagtaagtgtttttcacatctatcaagttttt 32766479  T
Q  513 ---------ttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
             || ||||||||||| |  |||||||| |||| | ||||||||||||||||||||||    
T  32766480 cctttttggttttttgtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcgg 32766544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 472 - 514
Target Start/End: Original strand, 43095555 - 43095597
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatctaggtttttt 514  Q
    |||||||||||||||||| |||||||||||||| || ||||||    
T  43095555 tttcaatctaaataagtggttttcacatatatcgagttttttt 43095597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 472 - 502
Target Start/End: Original strand, 52944236 - 52944266
Alignment:
Q  472 tttcaatctaaataagtgattttcacatata 502  Q
    |||||||||||||||||||||||||||||||    
T  52944236 tttcaatctaaataagtgattttcacatata 52944266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 473 - 518
Target Start/End: Original strand, 4937757 - 4937801
Alignment:
Q  473 ttcaatctaaataagtgattttcacatatatctaggttttttcttt 518  Q
    |||||||||||||||||||||||| |||||| || |||||||||||    
T  4937757 ttcaatctaaataagtgattttcatatatat-taagttttttcttt 4937801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 448
Target Start/End: Original strand, 10496203 - 10496240
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcac 448  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  10496203 gaggtgtggttttaggtcaatttttgacctagaatcac 10496240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 514
Target Start/End: Complemental strand, 21365258 - 21365201
Alignment:
Q  457 atctttttctctatatttcaatctaaataagtgattttcacatatatctaggtttttt 514  Q
    ||||||||||||  |||| ||| |||||||||| |||| |||||||||||| ||||||    
T  21365258 atctttttctctccattttaatataaataagtggttttgacatatatctagatttttt 21365201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 518
Target Start/End: Complemental strand, 26633918 - 26633810
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttc-tctata-tttcaatctaaataagtgattttcacatatatctagg 508  Q
    |||| ||||| || ||||| ||||||||||| |||||| | | | |||||||||| ||| |  |||||||||||||||||| ||||||||| |||| | |    
T  26633918 gaggggtggtcttaggtcattttttgacctagaatcacccctatacatctttttcctcttttctttcaatctaaataagtggttttcacatctatc-aag 26633820  T
Q  509 ttttttcttt 518  Q
    ||||||||||    
T  26633819 ttttttcttt 26633810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 504
Target Start/End: Original strand, 5119264 - 5119296
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatc 504  Q
    |||||||||||||||||| ||||||||||||||    
T  5119264 tttcaatctaaataagtggttttcacatatatc 5119296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 504
Target Start/End: Original strand, 9634599 - 9634631
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatc 504  Q
    |||| ||||||||||||||||||||||||||||    
T  9634599 tttcgatctaaataagtgattttcacatatatc 9634631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 579
Target Start/End: Original strand, 22300855 - 22300887
Alignment:
Q  547 tgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||||||||||| ||||||||||    
T  22300855 tgttgttcgtcgtcttgtgcggcgttgtttgat 22300887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 504
Target Start/End: Complemental strand, 24099254 - 24099222
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatc 504  Q
    |||||||||||||||||||||||||||| ||||    
T  24099254 tttcaatctaaataagtgattttcacatctatc 24099222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 504
Target Start/End: Complemental strand, 29961109 - 29961077
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatc 504  Q
    |||||||||||||||||||||||||||| ||||    
T  29961109 tttcaatctaaataagtgattttcacatctatc 29961077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 579
Target Start/End: Complemental strand, 47320494 - 47320462
Alignment:
Q  547 tgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||||||||||| ||||||||||    
T  47320494 tgttgttcgtcgtcttgtgcggcgttgtttgat 47320462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 168; Significance: 9e-90; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 360 - 567
Target Start/End: Original strand, 14545342 - 14545549
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc 459  Q
    |||||| || || |||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||| ||||||| ||||||||||||||||||    
T  14545342 aagccggccctagttttctctctctaggttttctcttctagattttccatcgagcggtggttttgtgtcaattcttgacctgaaatcactcatcttcatc 14545441  T
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgt 559  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14545442 tttttctctatatttcaatctaaataagtgattttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 14545541  T
Q  560 cttgtgcg 567  Q
    ||||||||    
T  14545542 cttgtgcg 14545549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 370 - 577
Target Start/End: Original strand, 51871697 - 51871903
Alignment:
Q  370 taattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctcta 469  Q
    ||||||||||||||||||||||||||||| | || | ||| | || ||||||||||||||||| ||||||||||||||| | |||||||||||||||||     
T  51871697 taattttctctctctaggttttctcttctcgtttcttcattgggg-gtggttttgggtcaattcttgacctaaaatcacccctcttcatctttttctctc 51871795  T
Q  470 tatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggt 569  Q
    ||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||      
T  51871796 tatttcaatctaaataagtgactttcacatagatctagcttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgac 51871895  T
Q  570 gttgtttg 577  Q
    ||||||||    
T  51871896 gttgtttg 51871903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 416 - 579
Target Start/End: Original strand, 28035017 - 28035181
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctagg-tttttt 514  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||    
T  28035017 gtggttttgggtcaattattgacctgaaatcactcatcttcatctttttctctctatttcaatctaaataagtgattttcacatagatctaggttttttt 28035116  T
Q  515 ctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28035117 ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgat 28035181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 361 - 577
Target Start/End: Complemental strand, 51868903 - 51868686
Alignment:
Q  361 agccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatct 460  Q
    |||||||| ||||||||||||| ||||||||||||||  | || | ||| | || |||||||||||| |||| ||||||| ||||||| | |||||||||    
T  51868903 agccgaccctaattttctctctttaggttttctcttcccgtttcttcattggggggtggttttgggttaattcttgacctgaaatcacccctcttcatct 51868804  T
Q  461 ttttctctatatttcaatctaaataagtgattttcacatatatctaggtt-ttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgt 559  Q
    |||||||| ||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  51868803 ttttctctctatttcaatctaaataagtgactttcacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 51868704  T
Q  560 cttgtgcggtgttgtttg 577  Q
    ||||||||| ||||||||    
T  51868703 cttgtgcggcgttgtttg 51868686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 376 - 579
Target Start/End: Complemental strand, 40881256 - 40881051
Alignment:
Q  376 tctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttc 475  Q
    |||||||||||||||||||||   | || | ||| ||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  40881256 tctctctctaggttttctcttaccgtttcttcattgagggatggttttgggtcaattcttgacctaaaatcactcatcttcatctttttctctctatttc 40881157  T
Q  476 aatctaaataagtgattttcacatatatctaggtt--ttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttg 573  Q
    ||||||||| |||||||||||| || |||||||||  |||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  40881156 aatctaaatgagtgattttcacttagatctaggttttttttttttgagatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttg 40881057  T
Q  574 tttgat 579  Q
    ||||||    
T  40881056 tttgat 40881051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 376 - 565
Target Start/End: Complemental strand, 30818588 - 30818399
Alignment:
Q  376 tctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttc 475  Q
    |||||||||| ||||||| ||  || || | ||| |||| || |||||||||||||| ||||||| ||||||| ||||||||||||||||||| ||||||    
T  30818588 tctctctctaagttttcttttacagtttcttcattgaggggtagttttgggtcaattattgacctgaaatcacccatcttcatctttttctctctatttc 30818489  T
Q  476 aatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtg 565  Q
    ||||||||||||||||||||||||| |||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  30818488 aatctaaataagtgattttcacataaatctagtttttttttttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtg 30818399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 373 - 579
Target Start/End: Complemental strand, 35584867 - 35584657
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    |||||| |||||||||||||||||  |  || | ||| |||| ||| ||||||||||||| || |||| ||||||||||||||||||||||||||| |||    
T  35584867 ttttctttctctaggttttctcttacaatttcttcattgaggggtgattttgggtcaattcttaacctgaaatcactcatcttcatctttttctctttat 35584768  T
Q  473 ttcaatctaaataagtgattttcacatatatctaggtt----ttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
    |||||||||||||||||||||||||||| |||||||||    |||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||    
T  35584767 ttcaatctaaataagtgattttcacatagatctaggttttttttttctttgtaattttataatctaagtgtggtgatttgttgttcgtcgtcttgtgcgg 35584668  T
Q  569 tgttgtttgat 579  Q
     ||||||||||    
T  35584667 cgttgtttgat 35584657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 373 - 579
Target Start/End: Complemental strand, 33291665 - 33291457
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatcttttt-ctctata 471  Q
    |||||| ||||||| |||| |||| ||| |||| ||| |||| ||||||||||||||||| ||||||| ||||||| | ||||||| ||||| || | ||    
T  33291665 ttttctttctctagattttttcttatagttttttcattgaggggtggttttgggtcaattcttgacctgaaatcacccctcttcattttttttctttcta 33291566  T
Q  472 tttcaatctaaataagtgattttcacatatatctaggtttttt-ctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtg 570  Q
    ||||||| ||||||||||||||||||||| ||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33291565 tttcaatataaataagtgattttcacataaatctatgtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtg 33291466  T
Q  571 ttgtttgat 579  Q
    |||||||||    
T  33291465 ttgtttgat 33291457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 359 - 577
Target Start/End: Original strand, 7342543 - 7342762
Alignment:
Q  359 taagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcat 458  Q
    ||||||| || ||||||||||||||||||||||||||||  | || | ||| | || ||||||||||||||||||||||||| ||||||| | |||||||    
T  7342543 taagccggccctaattttctctctctaggttttctcttcccgtttcttcattggggggtggttttgggtcaatttttgacctgaaatcacccctcttcat 7342642  T
Q  459 ctttttctctatatttcaatctaaataagtgattttcacatatatctaggtttt-ttctttgtgatttcataatctaagtgtggtggtttgttgttcgtc 557  Q
     ||||| | | ||||||||||||||||||||| ||| || || ||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  7342643 atttttttatctatttcaatctaaataagtgacttttacgtagatctatgtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtc 7342742  T
Q  558 gtcttgtgcggtgttgtttg 577  Q
    ||||||||||| ||||||||    
T  7342743 gtcttgtgcggcgttgtttg 7342762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 370 - 579
Target Start/End: Complemental strand, 5324806 - 5324597
Alignment:
Q  370 taattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctcta 469  Q
    ||||||||||||||||| |||||||||| || || | ||| ||||  || ||||||||||||| |||||||  ||||||   |||||||||||||||||     
T  5324806 taattttctctctctagattttctcttcaagtttcttcattgagggatgattttgggtcaattcttgacctggaatcacctctcttcatctttttctctc 5324707  T
Q  470 tatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggt 569  Q
    |||||||||||||||||||||||||||| || || || |||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  5324706 tatttcaatctaaataagtgattttcacgtaaatttaagtttttcctttgtgatttcatcatctaagtgtggtggtttgttgttcgccgtcttgtgcggt 5324607  T
Q  570 gttgtttgat 579  Q
     |||||||||    
T  5324606 attgtttgat 5324597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 416 - 579
Target Start/End: Original strand, 27872617 - 27872780
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttc 515  Q
    ||||||||||||||||||||||| | ||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  27872617 gtggttttgggtcaatttttgacatgaaatcacccatcttcatctttttcgctctatttcaatctaaataagtgattttcacatagatctaagttttttc 27872716  T
Q  516 tttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    || |||||| ||| ||||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  27872717 ttcgtgattgcatcatctaagtgtggtggtttgttgttcgtcgtcttgttcgacgttgtttgat 27872780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 376 - 579
Target Start/End: Original strand, 11453773 - 11453977
Alignment:
Q  376 tctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctat--att 473  Q
    |||||||||||||||||||||  || || | ||| ||||  ||||||  |||||||||||||| | ||||||||| ||||||||||||||||| |  |||    
T  11453773 tctctctctaggttttctctttcagtttcttcattgagggatggtttctggtcaatttttgacttgaaatcactc-tcttcatctttttctctctctatt 11453871  T
Q  474 tcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttg 573  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | | ||    
T  11453872 tcaatctaaataagtggttttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgctg 11453971  T
Q  574 tttgat 579  Q
    ||||||    
T  11453972 tttgat 11453977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 416 - 579
Target Start/End: Original strand, 20266180 - 20266344
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctag-gtttttt 514  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||  ||||||    
T  20266180 gtggttttgggtcaattcttgatctaaaatcacccatcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctagcttttttt 20266279  T
Q  515 ctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||| ||||||| |||||||||||||| ||||||||||||||||||||| ||  |||||||||    
T  20266280 ctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgtggaattgtttgat 20266344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 411 - 579
Target Start/End: Original strand, 7997660 - 7997831
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctagg-- 508  Q
    |||| |||||||||||| ||||||||| || ||||||| | ||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||      
T  7997660 gaggggtggttttgggttaatttttgatctgaaatcacccttcttcatctttttctctttatttcaatataaataagtgattttcacatagatctaggtt 7997759  T
Q  509 -ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
     |||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  7997760 tttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgat 7997831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 361 - 577
Target Start/End: Complemental strand, 25406542 - 25406325
Alignment:
Q  361 agccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatct 460  Q
    ||||| || ||||||||| |||||| ||||| |||||  | || | ||| | || ||| ||||||||||||| ||||||| ||||||| | |||||||||    
T  25406542 agccggccttaattttctttctctaagttttttcttcccgtttcttcattggggggtgattttgggtcaattcttgacctgaaatcacacctcttcatct 25406443  T
Q  461 ttttctctatatttcaatctaaataagtgattttcacatatatctaggtt-ttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgt 559  Q
    |||||||| ||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||| | |||||||||||||||||| |||||||||||    
T  25406442 ttttctctctatttcaatctaaataagtgactttcacatagatctaggtttttttctttgtgatttcgtcatctaagtgtggtggtttattgttcgtcgt 25406343  T
Q  560 cttgtgcggtgttgtttg 577  Q
    |||||| || ||||||||    
T  25406342 cttgtgtggcgttgtttg 25406325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 416 - 560
Target Start/End: Complemental strand, 38520736 - 38520592
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttc 515  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||| ||||||||    
T  38520736 gtggttttggatcaattttttacctgaaatcactcatcttcatctttttctctctatttcgatctaaataagtgattttcacatagatctatgttttttc 38520637  T
Q  516 tttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtc 560  Q
    || |||||||||| ||||||| |||||||||||||||||||||||    
T  38520636 ttcgtgatttcatcatctaagagtggtggtttgttgttcgtcgtc 38520592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 378 - 575
Target Start/End: Complemental strand, 18569551 - 18569353
Alignment:
Q  378 tctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaa 477  Q
    |||||||||||||||||||| || || | ||| |||| |||||||||||||||||||||||   |||||||   ||||||||||||||||| ||||||||    
T  18569551 tctctctaggttttctcttccagtttcttcattgaggggtggttttgggtcaatttttgacaagaaatcacctgtcttcatctttttctctctatttcaa 18569452  T
Q  478 tctaaataagtgattttcacatatatctaggtttt-ttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtt 575  Q
    ||||||||||||||||||||||| ||||||||||| ||||| |||||||| | || | ||||||||||| ||||||||||| |||||| ||||||||||    
T  18569451 tctaaataagtgattttcacatagatctaggttttcttcttcgtgatttcgtcatttgagtgtggtggtgtgttgttcgtcatcttgtccggtgttgtt 18569353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 360 - 577
Target Start/End: Complemental strand, 50166357 - 50166140
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc 459  Q
    |||||| || ||||||||||||||||||||||||||||  | || | ||| | || ||||||||||||||||| ||||||| ||||  | | |||| |||    
T  50166357 aagccgcccataattttctctctctaggttttctcttcccgtttcttcattgggg-gtggttttgggtcaattattgacctgaaattgcccctctttatc 50166259  T
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatctaggtttttt-ctttgtgatttcataatctaagtgtggtggtttgttgttcgtcg 558  Q
    ||||||| | ||||||||||||||||||||| ||||||||| || |||||||||| || ||||||||||| |||||||||||||||||||||||||||||    
T  50166258 tttttctatctatttcaatctaaataagtgaatttcacatagatttaggtttttttctatgtgatttcatcatctaagtgtggtggtttgttgttcgtcg 50166159  T
Q  559 tcttgtgcggtgttgtttg 577  Q
    |||||||||| ||| ||||    
T  50166158 tcttgtgcggcgttatttg 50166140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 359 - 579
Target Start/End: Original strand, 5701078 - 5701301
Alignment:
Q  359 taagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcat 458  Q
    ||||||| || || ||||||||||||| ||||||||||  |  || |  || |||| |||  |||||||||||  ||||||| ||||||| | |||||||    
T  5701078 taagccggccctagttttctctctctaagttttctcttacaatttctttattgaggggtgactttgggtcaatacttgacctgaaatcacccctcttcat 5701177  T
Q  459 ctttttctctatatttcaatctaaataagtgattttcacatatatctagg---ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcg 555  Q
    |||||||||| ||||||||| ||||||||||||||||||||| |||||||   |||||||||||| ||||||| |||||||||||||| |||||||||||    
T  5701178 ctttttctctttatttcaatttaaataagtgattttcacatagatctaggtttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcg 5701277  T
Q  556 tcgtcttgtgcggtgttgtttgat 579  Q
    ||||||||||||| ||||||||||    
T  5701278 tcgtcttgtgcggcgttgtttgat 5701301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 380 - 579
Target Start/End: Original strand, 19723176 - 19723375
Alignment:
Q  380 tctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatcttttt-ctctatatttcaat 478  Q
    ||||||||||||||||| ||| || | ||| |||| ||||||||||||||||| ||||| | |||||||   ||||||| ||||| |||| |||| ||||    
T  19723176 tctctaggttttctcttatagtttcttcattgagg-gtggttttgggtcaattattgacttgaaatcacctctcttcatattttttctctctatt-caat 19723273  T
Q  479 ctaaataagtgattttcacatatatctaggtttt-ttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttg 577  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  19723274 ctaaataagtgattttcacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttctgcggcgttgtttg 19723373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 373 - 579
Target Start/End: Complemental strand, 45426309 - 45426105
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtg-tggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctata 471  Q
    |||| |||||||||||||||| ||| || || | ||| |||| | |||||||||||||||| ||||  | |||||||  || ||||||||||||||| ||    
T  45426309 ttttttctctctaggttttcttttccagtttcttcattgagggggtggttttgggtcaattcttgatttgaaatcacctattttcatctttttctctcta 45426210  T
Q  472 tttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgt 571  Q
    ||| ||||||||||||||||||||||||| ||||| |||||||   ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  45426209 tttaaatctaaataagtgattttcacatagatctaagtttttt---tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgt 45426113  T
Q  572 tgtttgat 579  Q
    ||||||||    
T  45426112 tgtttgat 45426105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 360 - 540
Target Start/End: Original strand, 40646510 - 40646692
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc 459  Q
    |||||| || || ||||||||||||||||||||||||  |  || | ||| |||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  40646510 aagccggccctagttttctctctctaggttttctcttacaatttcttcattgaggggtggttttgggtcaattcttgacctaaaatcactcatcttcatc 40646609  T
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatctagg--ttttttctttgtgatttcataatctaagtgtg 540  Q
    ||||||| | |||||||||||||||||||||||||||| || |||||||  |||||||||||| ||||||| |||||||||||    
T  40646610 tttttctatttatttcaatctaaataagtgattttcacgtagatctaggttttttttctttgtaatttcatcatctaagtgtg 40646692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 416 - 577
Target Start/End: Original strand, 9172366 - 9172530
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctagg-tttttt 514  Q
    ||||||||||||||||| ||||||| ||||||| | ||||||| ||||| ||| ||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  9172366 gtggttttgggtcaattcttgacctgaaatcacccctcttcatatttttttctctatttcaatctaaataagtgactttcacatagatctaggttttttt 9172465  T
Q  515 ctt--tgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttg 577  Q
    |||  |||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9172466 ctttgtgtgattttatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttg 9172530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 416 - 577
Target Start/End: Original strand, 9180348 - 9180512
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctagg-tttttt 514  Q
    ||||||||||||||||| ||||||| ||||||| | ||||||| ||||| ||| ||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  9180348 gtggttttgggtcaattcttgacctgaaatcacccctcttcatatttttttctctatttcaatctaaataagtgactttcacatagatctaggttttttt 9180447  T
Q  515 ctt--tgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttg 577  Q
    |||  |||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9180448 ctttgtgtgattttatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttg 9180512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 416 - 579
Target Start/End: Original strand, 3871286 - 3871450
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactca-tcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggtttttt 514  Q
    |||||||||||| |||| |||| || ||||||| |  | ||||||||| |||||  |||||||||||||||||||||||||||||| ||||| |||||||    
T  3871286 gtggttttgggttaattcttgatctgaaatcacccccttttcatctttctctctcaatttcaatctaaataagtgattttcacatagatctaagtttttt 3871385  T
Q  515 ctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  3871386 ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgttgtttgat 3871450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 459 - 579
Target Start/End: Original strand, 34519054 - 34519174
Alignment:
Q  459 ctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcg 558  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  34519054 ctttttctctctatttcaatctaaataagtgattttcacatagatctaggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtcg 34519153  T
Q  559 tcttgtgcggtgttgtttgat 579  Q
    | |||||||| ||||||||||    
T  34519154 ttttgtgcggcgttgtttgat 34519174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 416 - 579
Target Start/End: Complemental strand, 50272343 - 50272179
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatct-aggtttttt 514  Q
    ||||||||||||||||| ||||||| ||||||| | | ||||||||||||||| ||||||||||||||||||| ||||||||||| |||| || ||||||    
T  50272343 gtggttttgggtcaattcttgacctgaaatcacccctattcatctttttctctttatttcaatctaaataagtaattttcacatagatctaagttttttt 50272244  T
Q  515 ctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||||||||||  ||||||| ||||| ||||||||||||||| |||||||| ||||||||||    
T  50272243 ctttgtgatttcatcttctaagtttggtgatttgttgttcgtcgttttgtgcggcgttgtttgat 50272179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 411 - 567
Target Start/End: Original strand, 30878948 - 30879106
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatca-ctcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctagg- 508  Q
    |||| ||||||||||||||||||||||||| | |||| ||| ||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||| |     
T  30878948 gaggggtggttttgggtcaatttttgacctgagatcatctc-tcttcatctttttctctttattttaatctaaataagtgattttcacatagatctatgt 30879046  T
Q  509 -ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcg 567  Q
     |||||||||||| ||||||| || ||||||||||| |||||||||||||||||||||||    
T  30879047 tttttttctttgtaatttcatcatttaagtgtggtgatttgttgttcgtcgtcttgtgcg 30879106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 452 - 577
Target Start/End: Original strand, 9919303 - 9919429
Alignment:
Q  452 tcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggtttt-ttctttgtgatttcataatctaagtgtggtggtttgtt 550  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||| ||||| |||||||||||||||  |||||||||||||||||||||    
T  9919303 tcttcatctttttctctctatttcaatctaaataagtgatttttacatagatctatgtttttttctttgtgatttcaccatctaagtgtggtggtttgtt 9919402  T
Q  551 gttcgtcgtcttgtgcggtgttgtttg 577  Q
    |||||||||||||| ||| ||||||||    
T  9919403 gttcgtcgtcttgtacggcgttgtttg 9919429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 362 - 552
Target Start/End: Original strand, 50148196 - 50148389
Alignment:
Q  362 gccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctt 461  Q
    ||||||| || |||||||||||||| ||||||||| ||  || | ||| |||| ||||||||||||||||| | || || ||||||  |||||||||| |    
T  50148196 gccgaccctagttttctctctctagattttctcttataatttcttcattgaggggtggttttgggtcaattctagatctgaaatcatccatcttcatcct 50148295  T
Q  462 tttctctatatttcaatctaaataagtgattttcacatatatctagg---ttttttctttgtgatttcataatctaagtgtggtggtttgttgt 552  Q
    ||||||| ||||| ||||||||||||||||||||||||| |||||||   |||||||||||| |||||||  ||||||||||||| ||||||||    
T  50148296 tttctctttattttaatctaaataagtgattttcacatagatctaggtttttttttctttgtaatttcatcttctaagtgtggtgatttgttgt 50148389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 419 - 565
Target Start/End: Complemental strand, 7312298 - 7312153
Alignment:
Q  419 gttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttcttt 518  Q
    ||||||||||||||||||||||||||| |||  ||||||||||||||||| ||||||||  ||||||| |||||||||| || ||||||||||||||||     
T  7312298 gttttgggtcaatttttgacctaaaattacttctcttcatctttttctctctatttcaaattaaataaatgattttcacgtagatctaggttttttcttc 7312199  T
Q  519 gtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtg 565  Q
    |||||||| | |||||||||||||||| |||||||| | ||||||||    
T  7312198 gtgatttcgt-atctaagtgtggtggtgtgttgttcattgtcttgtg 7312153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 416 - 579
Target Start/End: Complemental strand, 19716099 - 19715934
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctagg----ttt 511  Q
    ||||||||||||||||| |||| || ||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||    |||    
T  19716099 gtggttttgggtcaattcttgatctgaaatcaccc-tcttcatctttttctctttatttcaatctaaataagtgattttcacatagatttaggttttttt 19716001  T
Q  512 tttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||| |||| ||||||| ||||||||||||| | ||||||||||||||||||||| | ||||||||||    
T  19716000 tttcattgtaatttcatcatctaagtgtggt-gattgttgttcgtcgtcttgtgcagcgttgtttgat 19715934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 416 - 514
Target Start/End: Complemental strand, 25728162 - 25728064
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggtttttt 514  Q
    ||||||||||||||||| ||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  25728162 gtggttttgggtcaattcttgacctgaaatcactcctcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggtttttt 25728064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 477 - 579
Target Start/End: Original strand, 31836745 - 31836849
Alignment:
Q  477 atctaaataagtgattttcacatatatctaggtttt--ttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgt 574  Q
    |||||||||||||||||||||||| |||||||||||  |||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  31836745 atctaaataagtgattttcacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggtgttgt 31836844  T
Q  575 ttgat 579  Q
    |||||    
T  31836845 ttgat 31836849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 416 - 577
Target Start/End: Original strand, 44637300 - 44637461
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttc-tctatatttcaatctaaataagtgattttcacatatatctaggtttttt 514  Q
    ||||||||||||||||||| ||| |||||||||   |||||||||||||  ||| |||||||||||||||||||||||||||| || ||||| |||| ||    
T  44637300 gtggttttgggtcaatttt-gacataaaatcacctctcttcatcttttttatctttatttcaatctaaataagtgattttcacgtagatctaagtttctt 44637398  T
Q  515 ctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttg 577  Q
    |||||||||||| | |||||| ||||||| | |||||||||| ||||||||||  ||||||||    
T  44637399 ctttgtgatttcgtcatctaaatgtggtgatgtgttgttcgtagtcttgtgcgacgttgtttg 44637461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 416 - 576
Target Start/End: Complemental strand, 41081908 - 41081746
Alignment:
Q  416 gtggttttggg-tcaatttttgacctaaaatcactcatcttcatctttttctc-tatatttcaatctaaataagtgattttcacatatatctaggttttt 513  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||  |  ||||||||||| ||||||||||| | |||| ||||||||||||    
T  41081908 gtggttttggggtcaatttttgacctgaaatcactcatcttcatctttttctagtccatttcaatctatataagtgatttgcgcatagatctaggttttt 41081809  T
Q  514 tctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgttt 576  Q
    || | |||| ||| | |||  ||||||||||| |||||||| ||| ||||||||| |||||||    
T  41081808 tcatcgtgacttcgtcatccgagtgtggtggtgtgttgttcatcggcttgtgcggcgttgttt 41081746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 373 - 579
Target Start/End: Original strand, 39987220 - 39987431
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaa------tcactcatcttcatctttttct 466  Q
    |||| |||||||| |||||||||| ||| ||||| || || | ||||||||||||||||||||||| | |||      ||||   |||||||||||||||    
T  39987220 ttttttctctctaagttttctcttttagtttttc-attgaagagtggttttgggtcaatttttgacatgaaaatgaaatcacctctcttcatctttttct 39987318  T
Q  467 ctatatttcaatctaaataagtgatttt-cacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtg 565  Q
    || |  |||||||||||||||||||||| || ||| |||||| ||||||||| |||||||||  |||  ||||||||||| | |||||||||||||||||    
T  39987319 ctctgattcaatctaaataagtgatttttcatatagatctag-ttttttcttcgtgatttcaccatccgagtgtggtggtgtattgttcgtcgtcttgtg 39987417  T
Q  566 cggtgttgtttgat 579  Q
    ||| ||||||||||    
T  39987418 cggcgttgtttgat 39987431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 476 - 579
Target Start/End: Complemental strand, 9687356 - 9687243
Alignment:
Q  476 aatctaaataagtgattttcacatatatctaggtttttt----------ctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtg 565  Q
    ||||||||||||||||||||||||| || ||||||||||          |||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  9687356 aatctaaataagtgattttcacatagatataggtttttttgtttttattctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcatcttgtg 9687257  T
Q  566 cggtgttgtttgat 579  Q
    ||| ||||||||||    
T  9687256 cggcgttgtttgat 9687243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 379 - 579
Target Start/End: Complemental strand, 39927793 - 39927593
Alignment:
Q  379 ctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctc-tatatttcaa 477  Q
    |||| |||||||||||||| || |||| ||| ||| ||| ||||| ||||||||||| || | ||||||||  |||||||||| || |  | ||||||||    
T  39927793 ctctttaggttttctcttccagttttttcat-gag-tgtagtttttggtcaatttttaacatgaaatcacttctcttcatcttgttatagtctatttcaa 39927696  T
Q  478 tctaaataagtgattttcacatatatctaggtttttt-ctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgttt 576  Q
    ||||||||| | ||||||| ||| |||||| |||||| ||| |||||||| | |||  ||||||||||| ||||||||||||||||||| || |||||||    
T  39927695 tctaaataaataattttcagatagatctagatttttttcttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgtgtggcgttgttt 39927596  T
Q  577 gat 579  Q
    |||    
T  39927595 gat 39927593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 416 - 506
Target Start/End: Complemental strand, 45806012 - 45805922
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatcta 506  Q
    |||||||||||||||||||||| || |||||||   ||||| ||||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  45806012 gtggttttgggtcaatttttgatctgaaatcacctttcttcctctttttctctctatttcaatctaaataagtgactttcacataaatcta 45805922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 431 - 538
Target Start/End: Complemental strand, 30558842 - 30558736
Alignment:
Q  431 tttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataa 530  Q
    ||||| ||| ||||| |||| ||||||| ||||||| | |||||||||||||| |||||| ||||||| | ||||||||||||||||| ||||||||| |    
T  30558842 ttttttacccaaaataactcctcttcatatttttctttctatttcaatctaaaaaagtga-tttcacacagatctaggttttttctttatgatttcatca 30558744  T
Q  531 tctaagtg 538  Q
    ||| ||||    
T  30558743 tctgagtg 30558736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 431 - 568
Target Start/End: Complemental strand, 51916880 - 51916740
Alignment:
Q  431 tttttgacctaaaatcactcatcttcatctttttctctatatt---tcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttca 527  Q
    |||||||||||||||||||||||| ||||||||| ||| | ||   |||||||||||||||| |||||| ||| ||| || ||||   ||||||||||||    
T  51916880 tttttgacctaaaatcactcatctacatctttttttctcttttctttcaatctaaataagtggttttcaaataaatcaagtttttccttttgtgatttca 51916781  T
Q  528 taatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
    |  ||||| |  |||| | ||||||| ||||||||||||||    
T  51916780 tcgtctaattacggtgttatgttgttagtcgtcttgtgcgg 51916740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 416 - 579
Target Start/End: Complemental strand, 48365954 - 48365804
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttc 515  Q
    ||||||||||||||||||||||  | |||||||  |||||||||||||||||| | |||||| |||||             || | ||||||||||||||    
T  48365954 gtggttttgggtcaatttttgaaatgaaatcacctatcttcatctttttctctctgtttcaaactaaa-------------cagagatctaggttttttc 48365868  T
Q  516 tttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    || |||||||| | |||| ||||||||||| ||||||||||| ||||||||   ||||||||||    
T  48365867 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcatcttgtgcaacgttgtttgat 48365804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 411 - 572
Target Start/End: Complemental strand, 34878519 - 34878353
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatcttttt--ctctatatttcaatctaaataagtgattttcacatatatctagg 508  Q
    |||| |||||||| ||||| ||||||||||| |||||||||||| |||||||||  |  | | ||||||| |||||||||| |||||||| ||||| ||     
T  34878519 gaggggtggttttaggtcattttttgacctagaatcactcatctacatcttttttccattttctttcaatttaaataagtggttttcacacatatcaagt 34878420  T
Q  509 ttt---tttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgtt 572  Q
    |||   ||| ||||||| ||| |  | |||||  || | | ||||||||||||||||||||||||||    
T  34878419 tttttgtttttttgtgacttcgtcgtttaagtacggcgttgtgttgttcgtcgtcttgtgcggtgtt 34878353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 432 - 503
Target Start/End: Original strand, 26535260 - 26535333
Alignment:
Q  432 ttttgacctaaaatcactcatcttcatctttttctc--tatatttcaatctaaataagtgattttcacatatat 503  Q
    |||||||||| |||||| ||||| ||||||||||||  | | |||||||||||||||||| |||||||||||||    
T  26535260 ttttgacctagaatcacacatctacatctttttctccttttctttcaatctaaataagtggttttcacatatat 26535333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 416 - 518
Target Start/End: Original strand, 1742130 - 1742233
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctc--tatatttcaatctaaataagtgattttcacatatatctaggttttt 513  Q
    |||||||| ||||| ||||||||||| |||||| | ||| |||||||| | |  | | |||||||||||||||||| |||||||||||||| | ||||||    
T  1742130 gtggttttaggtcattttttgacctagaatcacccctctccatcttttcccccttttctttcaatctaaataagtggttttcacatatatc-aagttttt 1742228  T
Q  514 tcttt 518  Q
    |||||    
T  1742229 tcttt 1742233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 431 - 518
Target Start/End: Original strand, 15492157 - 15492243
Alignment:
Q  431 tttttgacctaaaatcactcatctt-catctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttcttt 518  Q
    ||||||||||||||||| |||| || ||||||||||  | | ||||||||||||||| ||||||||||||||||| | |||||||||||    
T  15492157 tttttgacctaaaatca-tcattttgcatctttttccatttctttcaatctaaataaatgattttcacatatatc-aagttttttcttt 15492243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 411 - 504
Target Start/End: Original strand, 49626754 - 49626849
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatcttttt--ctctatatttcaatctaaataagtgattttcacatatatc 504  Q
    |||| |||||||| ||||| | |||||||||||||||| | ||| |||||||||  | || | |||| |||||||||||||||||||||| |||||    
T  49626754 gaggggtggttttaggtcattctttgacctaaaatcacccctctgcatcttttttcccctttctttctatctaaataagtgattttcacaaatatc 49626849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 492 - 567
Target Start/End: Complemental strand, 7836951 - 7836876
Alignment:
Q  492 tttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcg 567  Q
    ||||||||||||| || |||||  |||||||||||||  |||||||| || | | |||||||||||||||||||||    
T  7836951 tttcacatatatcaagttttttcttttgtgatttcatcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcg 7836876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 420 - 514
Target Start/End: Complemental strand, 18650082 - 18649987
Alignment:
Q  420 ttttgggtcaatttttg-acctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggtttttt 514  Q
    ||||||||||||||||  | || ||||||  || ||| ||||||| |||| |||||| |||||||||||| ||||||||||| || ||||||||||    
T  18650082 ttttgggtcaatttttttatctgaaatcatgcagctttatcttttcctctctatttcgatctaaataagtaattttcacataaatataggtttttt 18649987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 425 - 579
Target Start/End: Original strand, 48750048 - 48750202
Alignment:
Q  425 ggtcaatttttgacctaaaatcactcatcttcatcttttt--ctctatatttcaatctaaataagtgattttcacatatatctaggttttttcttt-gtg 521  Q
    |||||| |||||||||| |||||||| | | |||||||||  | || | ||||||||||||||||||||||||||||| ||| ||  ||||||||| |||    
T  48750048 ggtcaaattttgacctagaatcactcct-tgcatcttttttcccctttctttcaatctaaataagtgattttcacatacatcaag--tttttctttcgtg 48750144  T
Q  522 atttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||    ||| |||| |  | | |||||||||||||||||||||  ||||||||||    
T  48750145 atttcgctgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcgacgttgtttgat 48750202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 500
Target Start/End: Original strand, 16161685 - 16161767
Alignment:
Q  420 ttttgggtcaatttttgacctaaaatcactcatcttcatcttttt-ctc-tatatttcaatctaaataagtgattttcacata 500  Q
    |||| ||||||||||||||||| ||||||   ||||||| ||||| ||| | |||||||||||||||||||||||| ||||||    
T  16161685 ttttaggtcaatttttgacctagaatcacctctcttcatattttttctcctttatttcaatctaaataagtgatttccacata 16161767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 498
Target Start/End: Original strand, 34528568 - 34528650
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcaca 498  Q
    ||||||||  |||| ||||||||||| |||||| | ||| |||||||||| || | |||| ||||||||||||||||| ||||    
T  34528568 gtggttttatgtcattttttgacctagaatcacccctctgcatctttttccctttctttcgatctaaataagtgatttccaca 34528650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 504
Target Start/End: Original strand, 12635014 - 12635106
Alignment:
Q  414 gtgtggttttgggtcaatttttgacctaaaatcactcatcttcatcttttt-ctctatatt-tcaatctaaataagtgattttcacatatatc 504  Q
    |||||||||| ||||| ||| ||||||| |||||| | | | ||||||||| | | || || |||||||||||||||||||||||||||||||    
T  12635014 gtgtggttttaggtcattttctgacctataatcacccctttgcatcttttttcccaattttgtcaatctaaataagtgattttcacatatatc 12635106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 518
Target Start/End: Complemental strand, 23291881 - 23291782
Alignment:
Q  420 ttttgggtcaatttttgacctaaaatcactcatcttcatcttttt-ctctata-tttcaatctaaataagtgattttcacatatatctaggttttttctt 517  Q
    |||| ||||| ||||||||||| |||||| | ||  ||||||||| |||| |  |||||||||||||||||| |||||||||||||| | ||||||||||    
T  23291881 ttttaggtcattttttgacctagaatcacccctcgacatcttttttctcttttctttcaatctaaataagtggttttcacatatatc-aagttttttctt 23291783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 523 - 559
Target Start/End: Complemental strand, 45805911 - 45805875
Alignment:
Q  523 tttcataatctaagtgtggtggtttgttgttcgtcgt 559  Q
    |||||| ||||||||||||||||||||||||||||||    
T  45805911 tttcatcatctaagtgtggtggtttgttgttcgtcgt 45805875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 526
Target Start/End: Original strand, 15397328 - 15397391
Alignment:
Q  463 ttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttc 526  Q
    |||||||||||| ||| ||||||||||||||||||||| || | | |||| ||| |||||||||    
T  15397328 ttctctatattttaatataaataagtgattttcacataaatttggattttgtctctgtgatttc 15397391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 499
Target Start/End: Original strand, 45789415 - 45789498
Alignment:
Q  417 tggttttgggtcaatttttgacctaaaatcactcatcttcatcttttt-ctctatatttcaatctaaataagtgattttcacat 499  Q
    ||||||| ||||| ||||||||||| |||||| | ||| ||||||||| | || | ||||||| |||||||||| |||||||||    
T  45789415 tggttttaggtcattttttgacctagaatcacccctctgcatctttttcccctttctttcaatttaaataagtggttttcacat 45789498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 526
Target Start/End: Complemental strand, 19052535 - 19052426
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttc 515  Q
    |||||||||||| |||||||||||  ||||||   |||||||| ||||  ||| | ||||| |||||||||||||| || | | | ||||| ||||||||    
T  19052535 gtggttttgggtaaatttttgacccgaaatcatcaatcttcatattttgttctctctttcagtctaaataagtgatatttaaaaagatcta-gttttttc 19052437  T
Q  516 tttgtgatttc 526  Q
    | |||||||||    
T  19052436 tgtgtgatttc 19052426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 526
Target Start/End: Original strand, 4396914 - 4396959
Alignment:
Q  482 aataagtgattttcacatatatctaggttt-tttctttgtgatttc 526  Q
    ||||||||||||||| ||| |||||||||| |||||||||||||||    
T  4396914 aataagtgattttcatataaatctaggtttatttctttgtgatttc 4396959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 500
Target Start/End: Complemental strand, 34413330 - 34413247
Alignment:
Q  420 ttttgggtcaatttttgacctaaaatcactcatcttcatctttttctc---tatatttcaatctaaataagtgattttcacata 500  Q
    |||| ||||||||||| | ||| |||||| | ||| ||||||||| ||   | | |||||||||||||||||||||||||||||    
T  34413330 ttttaggtcaattttttatctagaatcacccctctgcatctttttttcccctttctttcaatctaaataagtgattttcacata 34413247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 504
Target Start/End: Complemental strand, 568968 - 568936
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatc 504  Q
    |||||||||||||||||||||||||| ||||||    
T  568968 tttcaatctaaataagtgattttcacgtatatc 568936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 516 - 568
Target Start/End: Original strand, 5983797 - 5983849
Alignment:
Q  516 tttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
    ||||||||||| |  |||||||| || | ||||||||||||||||||||||||    
T  5983797 tttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcgg 5983849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 579
Target Start/End: Original strand, 12635159 - 12635191
Alignment:
Q  547 tgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||||||||||| ||||||||||    
T  12635159 tgttgttcgtcgtcttgtgcggcgttgtttgat 12635191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 464
Target Start/End: Original strand, 14872484 - 14872536
Alignment:
Q  412 aggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatcttttt 464  Q
    |||||||||||| ||||| |||||||| || |||||||| ||| |||||||||    
T  14872484 aggtgtggttttcggtcattttttgacttagaatcactcctctacatcttttt 14872536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 579
Target Start/End: Original strand, 16161823 - 16161855
Alignment:
Q  547 tgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||||||||||| ||||||||||    
T  16161823 tgttgttcgtcgtcttgtgcggcgttgtttgat 16161855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 474 - 518
Target Start/End: Original strand, 31918899 - 31918942
Alignment:
Q  474 tcaatctaaataagtgattttcacatatatctaggttttttcttt 518  Q
    |||||||||||||||| |||||||||||||| | |||||||||||    
T  31918899 tcaatctaaataagtggttttcacatatatc-aagttttttcttt 31918942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 579
Target Start/End: Complemental strand, 34413197 - 34413165
Alignment:
Q  547 tgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||||||||||| ||||||||||    
T  34413197 tgttgttcgtcgtcttgtgcggcgttgtttgat 34413165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 579
Target Start/End: Original strand, 34528719 - 34528751
Alignment:
Q  547 tgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||||||||||||| |||||||||||||||    
T  34528719 tgttgttcgtcgtcttgcgcggtgttgtttgat 34528751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 579
Target Start/End: Complemental strand, 36775817 - 36775785
Alignment:
Q  547 tgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||||||||| ||||||||||||    
T  36775817 tgttgttcgtcgtcttgtgcagtgttgtttgat 36775785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 579
Target Start/End: Original strand, 49626903 - 49626935
Alignment:
Q  547 tgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||||||||||| ||||||||||    
T  49626903 tgttgttcgtcgtcttgtgcggcgttgtttgat 49626935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 152; Significance: 3e-80; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 360 - 579
Target Start/End: Complemental strand, 23947576 - 23947357
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc 459  Q
    ||||||||| || ||||||||||||||||||| |||||||| || | ||| |||| ||||||||||||||||| ||||||| ||||||| ||||||||||    
T  23947576 aagccgaccctagttttctctctctaggttttttcttctagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatcacccatcttcatc 23947477  T
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgt 559  Q
     |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  23947476 gttttctctctatttcaatctaaataagtgattttcacatagatctaggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtcgt 23947377  T
Q  560 cttgtgcggtgttgtttgat 579  Q
    ||||||||| ||||||||||    
T  23947376 cttgtgcggcgttgtttgat 23947357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 352 - 568
Target Start/End: Complemental strand, 17237551 - 17237335
Alignment:
Q  352 agaaagttaagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactca 451  Q
    ||||||||||| || || || ||||||||||||| ||||||| ||||||||||||||| |||| ||||||||||||||||| ||||| | ||||||| |     
T  17237551 agaaagttaagtcggccctagttttctctctctatgttttcttttctagattttccattgaggggtggttttgggtcaattcttgacatgaaatcacccc 17237452  T
Q  452 tcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttg 551  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  17237451 tcttcatctttttctctatatttcaatctaaataagttattttcacatagatctaggttttttctttgtgatttcagcatctaagtgtggtggtttgttg 17237352  T
Q  552 ttcgtcgtcttgtgcgg 568  Q
    |||||||||||||||||    
T  17237351 ttcgtcgtcttgtgcgg 17237335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 360 - 579
Target Start/End: Original strand, 25064053 - 25064274
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc 459  Q
    |||||| || || ||||||||||||||||||||||||  |  || | ||| |||| ||||||||||||||||| ||||||| |||||||   ||||||||    
T  25064053 aagccggccctagttttctctctctaggttttctcttacaatttcttcattgaggggtggttttgggtcaattcttgacctgaaatcacctctcttcatc 25064152  T
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatctagg--ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtc 557  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||  |||||||||||| ||||||| |||||||||||||| |||||||||||||    
T  25064153 tttttctctttatttcaatctaaataagtgattttcacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtc 25064252  T
Q  558 gtcttgtgcggtgttgtttgat 579  Q
    ||||||||||| ||||||||||    
T  25064253 gtcttgtgcggcgttgtttgat 25064274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 373 - 579
Target Start/End: Original strand, 12652771 - 12652982
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    |||||||||||||||||||||||   || || | ||| |||| ||||||||||||||||| ||||||| ||||||| | ||||||||||||||||| |||    
T  12652771 ttttctctctctaggttttctctcacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctctctat 12652870  T
Q  473 ttcaatctaaataagtgattttcacatatatctaggtttttt-----ctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcg 567  Q
    |||||||||||||||||||||||||||| |||||| ||||||     |||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  12652871 ttcaatctaaataagtgattttcacatagatctagattttttttttcctttgtgatttcatcatctaagtgtggtggtttgttgttcatcgtcttgtgcg 12652970  T
Q  568 gtgttgtttgat 579  Q
    | ||||||||||    
T  12652971 gcgttgtttgat 12652982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 373 - 579
Target Start/End: Complemental strand, 4984823 - 4984606
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    |||| ||||| |||||||||||||  || || ||||| |||| ||||||||||||||||| ||||||| |||||||||||||||||| |||||||| |||    
T  4984823 ttttatctctttaggttttctcttacagtttctccattgaggggtggttttgggtcaattcttgacctgaaatcactcatcttcatc-ttttctctctat 4984725  T
Q  473 ttcaatctaaataagtgattttcacatat----atctaggtttttt--------ctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtc 560  Q
    |||||||||||||||||||||||||||||    |||||||||||||        |||||||||||||| |||||||||||||||||||||||||||||||    
T  4984724 ttcaatctaaataagtgattttcacatatatagatctaggtttttttgtttttcctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtc 4984625  T
Q  561 ttgtgcggtgttgtttgat 579  Q
    |||||||||||||||||||    
T  4984624 ttgtgcggtgttgtttgat 4984606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 360 - 577
Target Start/End: Original strand, 16418977 - 16419194
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc 459  Q
    |||||| || ||||||||||||||||||||||||| ||  | || | |||   || ||||||||| ||||||| || |||||||||||| ||||||||||    
T  16418977 aagccggccttaattttctctctctaggttttctcatcccgtttcttcatttggg-gtggttttgagtcaattcttaacctaaaatcacccatcttcatc 16419075  T
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatc-taggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcg 558  Q
    ||||||||| ||||||||||||||||||||| ||||||||| ||| | | |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16419076 tttttctctctatttcaatctaaataagtgactttcacatagatctttgtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcg 16419175  T
Q  559 tcttgtgcggtgttgtttg 577  Q
    |||||||||| ||||||||    
T  16419176 tcttgtgcggcgttgtttg 16419194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 370 - 575
Target Start/End: Original strand, 12165669 - 12165874
Alignment:
Q  370 taattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctcta 469  Q
    |||||| |||||||| |||||||||||| || || | ||| |||| ||  ||||||||||||| ||||||| ||||||||| ||||||||||||| |       
T  12165669 taatttactctctctcggttttctcttccagtttcttcattgaggagttattttgggtcaattattgacctgaaatcactcctcttcatctttttatgcc 12165768  T
Q  470 tatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggt 569  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||     
T  12165769 tatttcaatctaaataagtgattttcacatagatttaggttttttctttgtggttttatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggc 12165868  T
Q  570 gttgtt 575  Q
    ||||||    
T  12165869 gttgtt 12165874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 416 - 579
Target Start/End: Complemental strand, 8196610 - 8196446
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggtt-tttt 514  Q
    |||||||||| ||| || ||||||||||||||| | | ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||    
T  8196610 gtggttttggatcagttcttgacctaaaatcacccgtattcatctttttctctctatttcaatctaaataagtgattttcacatagatctaggttttttt 8196511  T
Q  515 ctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||    
T  8196510 ctttgtgatttcatcatataagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgat 8196446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 411 - 576
Target Start/End: Complemental strand, 33740786 - 33740620
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctagg-t 509  Q
    |||| |||||||| |||||||| ||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||| || |||| |    
T  33740786 gaggggtggtttttggtcaattcttgacctaaaatcacccctcttcatctttttctctctatttcaatctaaataagtgattttcacatagatttaggtt 33740687  T
Q  510 tttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgttt 576  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||| |||||||    
T  33740686 tttttctttgtgatttcatcatctaagtgtggcggtttgttgttcgtcgttttgtgcggcgttgttt 33740620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 411 - 579
Target Start/End: Complemental strand, 7876253 - 7876083
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctag--g 508  Q
    |||| |||||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||       
T  7876253 gaggggtggttttggatcaattattgacctaaaatcacccatcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctagatt 7876154  T
Q  509 ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||  ||||||| |||||||||||||| |||||||||||||||||||||||  ||||||||||    
T  7876153 ttttttctttgcaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcgacgttgtttgat 7876083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 373 - 579
Target Start/End: Original strand, 8496796 - 8497005
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    ||||||||||||||||||||||||  |  || | ||| |||| ||||||||| ||||||| ||||||| ||||||| | ||||||||||||||||| |||    
T  8496796 ttttctctctctaggttttctcttacaatttcttcattgaggggtggttttgagtcaattcttgacctgaaatcacccctcttcatctttttctctttat 8496895  T
Q  473 ttcaatctaaataagtgattttcacatatatctagg---ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggt 569  Q
    |||||||||||||||||||||||||||| |||||||   ||||||||||||  |||||| || |||||| |||| ||||||||||||| ||||||||||     
T  8496896 ttcaatctaaataagtgattttcacatagatctaggtttttttttctttgtagtttcatcatttaagtgcggtgatttgttgttcgtcatcttgtgcggc 8496995  T
Q  570 gttgtttgat 579  Q
    ||||||||||    
T  8496996 gttgtttgat 8497005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 360 - 534
Target Start/End: Original strand, 33109652 - 33109826
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc 459  Q
    |||||| || || |||||||| | |||||||||||||| || || | ||| || | |||||||||||||||||||||||||||||||   ||||||||||    
T  33109652 aagccggccctagttttctctttttaggttttctcttccagtttcttcattgacgggtggttttgggtcaatttttgacctaaaatcgtccatcttcatc 33109751  T
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatcta 534  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  33109752 tttttctctttatttcaatctaaataagtgattttcacatagatctaggttttttctttgtgatttcatcatcta 33109826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 360 - 579
Target Start/End: Complemental strand, 8028377 - 8028157
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc 459  Q
    ||||||||| ||| ||||||||| ||||||||||  |  || || | ||| |||  ||| ||||||||||||| |||| ||  |||||| |  |||||||    
T  8028377 aagccgaccttaactttctctctttaggttttctagtacagtttcttcattgagaggtgattttgggtcaattattgatctggaatcaccccacttcatc 8028278  T
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatctaggtttttt-ctttgtgatttcataatctaagtgtggtggtttgttgttcgtcg 558  Q
    ||||||||| | ||||||||||||||||||||||||||||| ||||| ||||||| |||| ||||||||| |||||||||||||||||||||||||||||    
T  8028277 tttttctctctgtttcaatctaaataagtgattttcacatagatctaagtttttttctttatgatttcatcatctaagtgtggtggtttgttgttcgtcg 8028178  T
Q  559 tcttgtgcggtgttgtttgat 579  Q
    |||||||||| ||||||||||    
T  8028177 tcttgtgcggcgttgtttgat 8028157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 420 - 579
Target Start/End: Original strand, 4468437 - 4468596
Alignment:
Q  420 ttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttg 519  Q
    ||||||||||||| ||||| | || |||| | |||||||||| |||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  4468437 ttttgggtcaattcttgacatgaagtcacccctcttcatcttgttctctctatttcaatctaaataagtgattttcatatagatctaggttttttctttg 4468536  T
Q  520 tgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||| | ||||||||||    
T  4468537 tgatttcatcatataagtgtggtggtttgttattcgtcgtcttgtgcagcgttgtttgat 4468596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 411 - 579
Target Start/End: Original strand, 4088328 - 4088498
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttc-tctatatttcaatctaaataagtgattttcacatatatctaggt 509  Q
    |||| ||||||||||||||||| ||||||| ||||||| ||||||||| |||||  ||| |||| |||||||||||||||||||||||||| |||||| |    
T  4088328 gaggggtggttttgggtcaattcttgacctgaaatcacccatcttcattttttttatctctattacaatctaaataagtgattttcacatagatctagtt 4088427  T
Q  510 ttttt-ctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  4088428 ttttttctttttgatttcatcatctaagtgtggtggtttgttgttcatcgtcttgtgcggcgttgtttgat 4088498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 416 - 577
Target Start/End: Original strand, 10228553 - 10228715
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatcta-ggtttttt 514  Q
    ||||||||||||||||| ||||||| ||||||| | ||||||||||| ||||| || |||||||||||||||||| ||| ||||||||||| | ||||||    
T  10228553 gtggttttgggtcaattcttgacctgaaatcacccctcttcatctttctctctctacttcaatctaaataagtgacttttacatatatctatgttttttt 10228652  T
Q  515 ctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttg 577  Q
    |||||||||||||| || |||||||| ||||||||||||||||||||||||||| ||||||||    
T  10228653 ctttgtgatttcatcatttaagtgtgatggtttgttgttcgtcgtcttgtgcggcgttgtttg 10228715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 411 - 579
Target Start/End: Complemental strand, 7881311 - 7881141
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctag--g 508  Q
    |||| |||||||||| |||||| ||||| | |||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||       
T  7881311 gaggggtggttttggatcaattattgacttgaaatcacctttcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctagatt 7881212  T
Q  509 ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||  ||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  7881211 ttttttctttgcaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgat 7881141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 372 - 579
Target Start/End: Original strand, 17334606 - 17334816
Alignment:
Q  372 attttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctata 471  Q
    ||||||||||||||| |||||||||  |  || | ||| |||| |||||||||| || ||| |||| || |||||||  |||||||||||||||| | ||    
T  17334606 attttctctctctagattttctcttacaatttcttcattgagg-gtggttttggatcgattcttgatctgaaatcaccaatcttcatctttttctgttta 17334704  T
Q  472 tttcaatctaaataagtgattttcacatatatctagg----ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcg 567  Q
    ||||||||||||||||||||||||||||| ||||| |    |||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||    
T  17334705 tttcaatctaaataagtgattttcacatagatctaagttttttttttctttgtaatttcataatctaagtgtggtgatttgttgtacgtcgtcttgtgcg 17334804  T
Q  568 gtgttgtttgat 579  Q
    | ||||||||||    
T  17334805 gcgttgtttgat 17334816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 388 - 579
Target Start/End: Complemental strand, 33543851 - 33543659
Alignment:
Q  388 ttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatctt-catctttttctctatatttcaatctaaataa 486  Q
    ||||||||||||| || | | | |||| ||||||||| |||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  33543851 ttttctcttctagtttcttcgttgaggggtggttttgagtcagtttttgacctgaaatcactcatctttcatctttttctctatatttcaatctaaataa 33543752  T
Q  487 gtgatttt-cacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    || ||||| |||||| || || |||||| ||| |||||||| | |||| | | ||||||| |||||||||||||||||||||| ||||||||||    
T  33543751 gtaatttttcacatagatttaagttttt-cttcgtgatttcgtcatctgattatggtggtgtgttgttcgtcgtcttgtgcggcgttgtttgat 33543659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 411 - 579
Target Start/End: Original strand, 34489117 - 34489288
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatcta--aataagtgatttt-cacatatatctag 507  Q
    |||| |||||||| | |||||||||||| ||||||||| | ||||||||||||||||| || |||||| ||  ||||||||||||| |||||| ||||||    
T  34489117 gaggggtggtttttgatcaatttttgacttaaaatcacccctcttcatctttttctctctaattcaatatataaataagtgatttttcacatagatctag 34489216  T
Q  508 gttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||| |||||||||| |||  ||||||||||| |||||||||||||||||||||  ||||||||||    
T  34489217 gttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttgtgcgacgttgtttgat 34489288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 458 - 577
Target Start/End: Original strand, 35001506 - 35001626
Alignment:
Q  458 tctttttctctatatttcaatctaaataagtgattttcacatatatctaggtttt-ttctttgtgatttcataatctaagtgtggtggtttgttgttcgt 556  Q
    ||||||||||| ||||| ||||||||||||||| ||| ||||| ||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  35001506 tctttttctctctattttaatctaaataagtgacttttacatagatctatgtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgt 35001605  T
Q  557 cgtcttgtgcggtgttgtttg 577  Q
    |||||||||||| ||||||||    
T  35001606 cgtcttgtgcggcgttgtttg 35001626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 420 - 579
Target Start/End: Complemental strand, 28635321 - 28635160
Alignment:
Q  420 ttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgatt--ttcacatatatctaggttttttctt 517  Q
    ||||||| ||||||||||||| ||||||  | ||||||| ||||||| | ||||||||| |||||||||||||  || ||||| ||||| |||||||||     
T  28635321 ttttgggacaatttttgacctcaaatcatccctcttcatatttttctttttatttcaatttaaataagtgattcttttacatagatctaagttttttcta 28635222  T
Q  518 tgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
     |||||||| | || | ||||||| |||||||||||||||||||||| ||||||||||||||    
T  28635221 cgtgatttcgtcatttgagtgtggcggtttgttgttcgtcgtcttgtacggtgttgtttgat 28635160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 471 - 579
Target Start/End: Original strand, 25337499 - 25337608
Alignment:
Q  471 atttcaatctaaataagtgattttcacatatatctaggtttttt-ctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggt 569  Q
    |||||||||||||||| ||||||||||||| ||||||||||||| ||| |||||||| | |||  ||||||||||| ||||||||||||||||| |||||    
T  25337499 atttcaatctaaataaatgattttcacataaatctaggtttttttcttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgcgcggt 25337598  T
Q  570 gttgtttgat 579  Q
    ||||||||||    
T  25337599 gttgtttgat 25337608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 506 - 579
Target Start/End: Original strand, 7027799 - 7027872
Alignment:
Q  506 aggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||||||  ||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||||||    
T  7027799 aggttttttccctgtgatttcatcatttaagtgtggtggtttgttgttcgtcgtcttgtacggagttgtttgat 7027872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 427 - 512
Target Start/End: Original strand, 25398451 - 25398536
Alignment:
Q  427 tcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggtttt 512  Q
    |||||||||||||  |||||  |||||||||||||||| ||| | | ||||||||||||||||||||| || || |||||||||||    
T  25398451 tcaatttttgacccgaaatcgttcatcttcatctttttatctttgtctcaatctaaataagtgattttaacgtagatctaggtttt 25398536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 417 - 483
Target Start/End: Original strand, 3108443 - 3108508
Alignment:
Q  417 tggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaa 483  Q
    ||||||||| |||||||| || ||| ||||||||||||| |||||||||||| ||||||||||||||    
T  3108443 tggttttggatcaatttt-gatctataatcactcatctttatctttttctctctatttcaatctaaa 3108508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 452 - 514
Target Start/End: Complemental strand, 5582819 - 5582757
Alignment:
Q  452 tcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggtttttt 514  Q
    ||||||||||||||| ||||||| ||||||||||| ||||||||| ||| ||||| |||||||    
T  5582819 tcttcatctttttctttatattttaatctaaataaatgattttcaaatagatctaagtttttt 5582757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 416 - 506
Target Start/End: Complemental strand, 9508918 - 9508829
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatcta 506  Q
    |||||||||| |||||||| |||| | ||||||   |||||  |||||||| | || ||||||||||||||||||||||||||||||||||    
T  9508918 gtggttttggatcaatttt-gacccataatcaccattcttccactttttctttttaattcaatctaaataagtgattttcacatatatcta 9508829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 460 - 525
Target Start/End: Original strand, 13436705 - 13436770
Alignment:
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgattt 525  Q
    ||||||||| ||||||||| ||||||||||||||||||||| |||||  |||||| || |||||||    
T  13436705 tttttctctctatttcaatttaaataagtgattttcacataaatctatattttttattcgtgattt 13436770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 538 - 579
Target Start/End: Original strand, 33110608 - 33110649
Alignment:
Q  538 gtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  33110608 gtggtggtttgttgttcatcgtcttgtgcggtgttgtttgat 33110649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 442 - 494
Target Start/End: Original strand, 8266535 - 8266587
Alignment:
Q  442 aaatcactcatcttcatctttttctctatatttcaatctaaataagtgatttt 494  Q
    ||||||||  ||||||||||||||||| || ||||||||||||||||||||||    
T  8266535 aaatcacttgtcttcatctttttctctctacttcaatctaaataagtgatttt 8266587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 500
Target Start/End: Original strand, 1523250 - 1523339
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctata-tttcaatctaaataagtgattttcacata 500  Q
    |||| ||| |||| ||||||||||||||||| |||||| | ||| ||| ||||||||| |  |||||||||||||||||||||| ||||||    
T  1523250 gaggggtgattttaggtcaatttttgacctagaatcaccc-tctgcatttttttctcttttctttcaatctaaataagtgatttccacata 1523339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 431 - 579
Target Start/End: Complemental strand, 4352189 - 4352035
Alignment:
Q  431 tttttgacctaaaatcactcatcttcatctttttctc-tatatttcaatctaaataagtgattttcacatatatctaggtttt-----ttctttgtgatt 524  Q
    ||||| |||| ||||||| ||||||||| |||||||  |  ||||||||| |||||||||||||||| ||| || ||| ||||     ||||| ||||||    
T  4352189 ttttttacctgaaatcacccatcttcatatttttctagtcaatttcaatccaaataagtgattttcatatagatttagtttttttgtcttcttcgtgatt 4352090  T
Q  525 tcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    || | |||  ||||||||| | |||||||||||||||| || || ||| ||||||    
T  4352089 tcgtcatccgagtgtggtgatgtgttgttcgtcgtcttatgtggcgttatttgat 4352035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 472 - 579
Target Start/End: Original strand, 28981082 - 28981196
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatctag-------gttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgt 564  Q
    |||||||||||||||||||||| |||||||||| ||        |||||| |||||||||| ||  ||| |||  || | | |||||||||||||||| |    
T  28981082 tttcaatctaaataagtgatttccacatatatcaagtgttttttttttttttttgtgattttatcgtctgagtacggcgttgtgttgttcgtcgtcttct 28981181  T
Q  565 gcggtgttgtttgat 579  Q
    |||||||||||||||    
T  28981182 gcggtgttgtttgat 28981196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 516 - 568
Target Start/End: Complemental strand, 32327348 - 32327296
Alignment:
Q  516 tttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
    |||||||||||||| |||||||| || | | ||||||||||||||||||||||    
T  32327348 tttgtgatttcatagtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgg 32327296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 472 - 518
Target Start/End: Complemental strand, 11321653 - 11321608
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatctaggttttttcttt 518  Q
    |||||||||||||||||| ||||||||||||| || |||||||||||    
T  11321653 tttcaatctaaataagtggttttcacatatat-taagttttttcttt 11321608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 425 - 579
Target Start/End: Complemental strand, 26588700 - 26588543
Alignment:
Q  425 ggtcaatttttgacctaaaatcactcatcttcatctttttctc-tatatttcaatctaaataagtgattttcacatatatctaggttttttctt--tgtg 521  Q
    ||||| ||||||| ||| |||||| ||||||||| |||||  | | | ||| |||||||||||||| ||| |||||||||| || |||||| ||  ||||    
T  26588700 ggtcagtttttgatctataatcacccatcttcattttttttccatttcttttaatctaaataagtggtttccacatatatcaagtttttttttttgtgtg 26588601  T
Q  522 atttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    | |||||  | | |||| || | | ||||| | |||||||||||||| ||||||||||    
T  26588600 aattcatcgtttgagtgcggagttgtgttgattgtcgtcttgtgcggcgttgtttgat 26588543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 504
Target Start/End: Original strand, 30493380 - 30493467
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatcttttt-ctctatatttcaatctaaataagtgattttcacatatatc 504  Q
    |||||||| ||||| ||||||||||| |||||| |||   ||||||||| | || | |||||| ||||||||||||||| ||||||||||    
T  30493380 gtggttttcggtcattttttgacctagaatcacccatg--catcttttttccctttctttcaaactaaataagtgatttccacatatatc 30493467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 417 - 504
Target Start/End: Complemental strand, 30608754 - 30608666
Alignment:
Q  417 tggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctc--tatatttcaatctaaataagtgattttcacatatatc 504  Q
    ||||||| ||||| ||||||||||| |||||| | ||| ||| ||||||||  | | ||||||||||||| |||| ||||||||||||||    
T  30608754 tggttttaggtca-tttttgacctagaatcacccctctacatatttttctccttttctttcaatctaaattagtggttttcacatatatc 30608666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 500
Target Start/End: Original strand, 545885 - 545957
Alignment:
Q  430 atttttgacctaaaatcactcatcttcatcttttt--ctctatatttcaatctaaataagtgattttcacata 500  Q
    |||||||||||| |||||||| ||| |||||||||  | || | ||||||||||||||||  |||||||||||    
T  545885 atttttgacctagaatcactcttctacatcttttttcccctttctttcaatctaaataagcaattttcacata 545957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 31575721 - 31575645
Alignment:
Q  428 caatttttgacctaaaatca-ctcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatcta 506  Q
    ||||||||||| |||||||| |||||| ||||||| |||||   |||| | | ||||| |||||||||||||||||||||    
T  31575721 caatttttgacataaaatcaactcatcgtcatcttcttctc---attttattttaaatgagtgattttcacatatatcta 31575645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 579
Target Start/End: Original strand, 22571461 - 22571493
Alignment:
Q  547 tgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||||||||||| ||||||||||    
T  22571461 tgttgttcgtcgtcttgtgcggcgttgtttgat 22571493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 145; Significance: 5e-76; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 360 - 579
Target Start/End: Original strand, 29503277 - 29503497
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtg-tggttttgggtcaatttttgacctaaaatcactcatcttcat 458  Q
    |||||| || || |||||||| |||| ||||||||||||||||||| |||||||| | || ||||||||||||| ||||||| ||||||| |||||||||    
T  29503277 aagccggccctagttttctctttctaagttttctcttctagatttttcatcgagggggtgattttgggtcaattcttgacctgaaatcacccatcttcat 29503376  T
Q  459 ctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcg 558  Q
     ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  29503377 atttttctctatatttcaatctaaataattgattttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcg 29503476  T
Q  559 tcttgtgcggtgttgtttgat 579  Q
    |||||||||| | ||||||||    
T  29503477 tcttgtgcggcgctgtttgat 29503497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 370 - 579
Target Start/End: Original strand, 46934468 - 46934677
Alignment:
Q  370 taattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctcta 469  Q
    ||||||||||||||||||||||||||||||  || | ||| |||| |||||||| |||||||||||||||| ||||||| | ||||||||||| |||||     
T  46934468 taattttctctctctaggttttctcttctactttcttcattgaggggtggtttttggtcaatttttgacctgaaatcacccctcttcatctttctctctc 46934567  T
Q  470 tatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggt 569  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  46934568 tatttcaatctaaataagtgattttcacatagatccaggttttttcttgttgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggt 46934667  T
Q  570 gttgtttgat 579  Q
    ||||||||||    
T  46934668 gttgtttgat 46934677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 373 - 576
Target Start/End: Original strand, 4172395 - 4172599
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    |||||||||||||| |||| ||||   | || | ||| |||| ||||||||||||||||| || || ||||||||  ||||||||||||||||||| |||    
T  4172395 ttttctctctctagattttttcttactgtttcttcattgaggggtggttttgggtcaattcttaacataaaatcatccatcttcatctttttctctctat 4172494  T
Q  473 ttcaatctaaataagtgattttcacatatatctagg-ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgt 571  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  4172495 ttcaatctaaataagtgattttcacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgtttttcgtcgtcttgtgcggtgt 4172594  T
Q  572 tgttt 576  Q
    |||||    
T  4172595 tgttt 4172599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 373 - 576
Target Start/End: Original strand, 4178393 - 4178597
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    ||||||||||||||||||| ||||   | || | ||| |||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||    
T  4178393 ttttctctctctaggttttttcttactgtttcttcattgaggggtggttttgggtcaattcttgacctaaaatcacccatcttcatctttttctctctat 4178492  T
Q  473 ttcaatctaaataagtgattttcacatatatctag-gttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgt 571  Q
    |||||||||||||||||||||||| ||| ||||||  |||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||| ||    
T  4178493 ttcaatctaaataagtgattttcagataaatctagctttttttctttgtgatttcatcatctaagtgtggtggtttgtttttcatcgtcttgtgcggcgt 4178592  T
Q  572 tgttt 576  Q
    |||||    
T  4178593 tgttt 4178597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 373 - 576
Target Start/End: Complemental strand, 25631773 - 25631568
Alignment:
Q  373 ttttctctctctaggttttctctt-ctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctata 471  Q
    |||||||||||||||||||||||| |||  | ||| || |||| ||||||||||||||||||||||||||||||||  | ||| ||||||||||||| ||    
T  25631773 ttttctctctctaggttttctcttactatttcttc-attgaggggtggttttgggtcaatttttgacctaaaatcatccctctccatctttttctctcta 25631675  T
Q  472 tttcaatctaaataagtgattttcacatatatctaggtt--ttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggt 569  Q
    ||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||     
T  25631674 tttcaatctaaataagtgattttcacatagatctaggttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttctccgtcttgtgcggc 25631575  T
Q  570 gttgttt 576  Q
    |||||||    
T  25631574 gttgttt 25631568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 373 - 579
Target Start/End: Original strand, 25162265 - 25162471
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    ||||||||||||||||||||||||  || || | ||  |||| ||||||||| ||||||| ||||  | ||||||| ||||||||||||||||||| |||    
T  25162265 ttttctctctctaggttttctcttacagtttcttcactgaggggtggttttgtgtcaattcttgatttgaaatcacccatcttcatctttttctctctat 25162364  T
Q  473 ttcaatctaaataagtgattttcacatatatctaggtttt-ttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgt 571  Q
    ||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||    
T  25162365 ttcaatctaaataagtgattt-cacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtagtttgttgttcgtcgtcttgtgcggcgt 25162463  T
Q  572 tgtttgat 579  Q
    ||||||||    
T  25162464 tgtttgat 25162471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 370 - 579
Target Start/End: Original strand, 36905947 - 36906157
Alignment:
Q  370 taattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctcta 469  Q
    |||||||||||||||||||||||||||  |  || | ||| || |  |||||||||||||||| ||||||| ||||||| | |||||||||||||||||     
T  36905947 taattttctctctctaggttttctcttacaatttcttcattgatggatggttttgggtcaattcttgacctgaaatcacccttcttcatctttttctctt 36906046  T
Q  470 tatttcaatctaaataagtgattttcacatatatctagg-ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
    ||||||||| ||||||||||||||||||||| || |||| |||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||    
T  36906047 tatttcaatataaataagtgattttcacatagatttaggtttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcgg 36906146  T
Q  569 tgttgtttgat 579  Q
     ||||||||||    
T  36906147 cgttgtttgat 36906157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 373 - 579
Target Start/End: Complemental strand, 39917642 - 39917436
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    |||||||||||||||||||| |||  || || | ||  |||| ||||||||||||||||| ||||||| ||||||  ||||||||| ||||||||| ||     
T  39917642 ttttctctctctaggttttcccttacagtttcttcactgaggagtggttttgggtcaattcttgacctgaaatcatccatcttcatatttttctctctaa 39917543  T
Q  473 ttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgtt 572  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||| ||  |||    
T  39917542 ttcaatctaaataagtgattttcacatagatctaggttttttccttgtgatttcatcatctaagtgtggtggtttgttgttcgttgtcttgtacgacgtt 39917443  T
Q  573 gtttgat 579  Q
    |||||||    
T  39917442 gtttgat 39917436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 416 - 579
Target Start/End: Complemental strand, 49552426 - 49552263
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttc 515  Q
    ||||||||||||||||| ||||||| ||||||| | |||||||| |||| ||| ||||||||||||||||||||| ||||||||  ||||||||||||||    
T  49552426 gtggttttgggtcaattcttgacctgaaatcacccctcttcatcattttttctctatttcaatctaaataagtgaatttcacattaatctaggttttttc 49552327  T
Q  516 tttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  49552326 tttgtgatttcatcatctaaatgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgat 49552263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 416 - 579
Target Start/End: Original strand, 17237674 - 17237840
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctagg---tttt 512  Q
    |||||| | |||||||| |||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||| || ||||   ||||    
T  17237674 gtggttctaggtcaattcttgacctaaaatcattcatcttcatctgtttctctctatttcaatctaaataagtgattttcacatagatttaggttttttt 17237773  T
Q  513 ttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  17237774 ttctttgtgatttcatcatctaagtgtggtggtttgttgtttgtcgtcttgtgcggcgttgtttgat 17237840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 417 - 568
Target Start/End: Complemental strand, 50611619 - 50611467
Alignment:
Q  417 tggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggtt-ttttc 515  Q
    |||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||    
T  50611619 tggttttgggtcaattattgacctaaaatcacccctcttcatctttttctctatatttcaatctaaataagtgattttcatatagatctaggtttttttc 50611520  T
Q  516 tttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
    ||||||||||||| ||||||||||| |||||| |||||||||||||| |||||    
T  50611519 tttgtgatttcatcatctaagtgtgatggtttattgttcgtcgtcttatgcgg 50611467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 416 - 562
Target Start/End: Complemental strand, 38440780 - 38440634
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttc 515  Q
    ||||||||| ||||||| ||||||| ||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  38440780 gtggttttgagtcaattcttgacctgaaatcactcctctttatctttttctctctatttcaatctaaataagtgattttcacatagatctaggttttttc 38440681  T
Q  516 tttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtctt 562  Q
    ||| ||||||||| ||| |||||||||||||||||||||||||||||    
T  38440680 tttttgatttcatgatcaaagtgtggtggtttgttgttcgtcgtctt 38440634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 373 - 567
Target Start/End: Complemental strand, 44907645 - 44907449
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    |||||||||||||||||||||| |  |  || | | | |||| ||||||||||||||||| ||||||| ||||||| | ||||||||||||||||| |||    
T  44907645 ttttctctctctaggttttctcctacaatttcttctttgaggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctctttat 44907546  T
Q  473 ttcaatctaaataagtgattttcacatatatctaggtt--ttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcg 567  Q
    ||||||||||| |||||||||||||||| |||||||||  |||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||    
T  44907545 ttcaatctaaacaagtgattttcacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcg 44907449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 360 - 576
Target Start/End: Complemental strand, 38855295 - 38855078
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctctt-ctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcat 458  Q
    ||||||||| || |||||||||||||||||||||||| |||  | ||| || |||| |||||||||||||| || |||||| |||||||| | |||||||    
T  38855295 aagccgaccctagttttctctctctaggttttctcttactatttcttc-attgaggggtggttttgggtca-ttcttgaccgaaaatcacccctcttcat 38855198  T
Q  459 ctttttctctatatttcaatctaaataagtgattttcacatatatctag--gttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgt 556  Q
    |||||||||| ||| ||||||||||||||||||||||||||| ||||||   |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  38855197 ctttttctctctatatcaatctaaataagtgattttcacatagatctagattttttttctttgtgatttcatcatctaagtgtgatggtttgttgttcgt 38855098  T
Q  557 cgtcttgtgcggtgttgttt 576  Q
     |||||||| || |||||||    
T  38855097 tgtcttgtgtggcgttgttt 38855078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 370 - 579
Target Start/End: Complemental strand, 35499451 - 35499237
Alignment:
Q  370 taattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactca-tcttcatctttttctct 468  Q
    |||||||||| |||||  |||||| ||  | ||| | ||| |||| |||||||| ||||||||||| |||| ||||||| |  |||||||||||||||||    
T  35499451 taattttctccctctaaattttcttttacaaattcttcattgaggggtggtttttggtcaattttttacctgaaatcaccccctcttcatctttttctct 35499352  T
Q  469 atatttcaatctaaataagtgattttcacatatatctaggtttttt----ctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgt 564  Q
     ||||||||||||||||||||||||||||||| |||||||||||||    |||||| ||||||| |||||||||||||| ||||||||||||||||||||    
T  35499351 ttatttcaatctaaataagtgattttcacatagatctaggttttttttttctttgtaatttcattatctaagtgtggtgatttgttgttcgtcgtcttgt 35499252  T
Q  565 gcggtgttgtttgat 579  Q
    |||| ||||||||||    
T  35499251 gcggcgttgtttgat 35499237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 360 - 579
Target Start/End: Original strand, 32607283 - 32607504
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtg-tggttttgggtcaatttttgacctaaaatcactcatcttcat 458  Q
    |||||| || || |||||||||||||| |||||||||  |  || | ||| |||| | |||||||||||||||| ||||||| |||| || | |||||||    
T  32607283 aagccggccctagttttctctctctagattttctcttacaatttcttcattgagggggtggttttgggtcaattcttgacctgaaat-acccctcttcat 32607381  T
Q  459 ctttttctctatatttcaatctaaataagtgattttcacatatatctagg--ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgt 556  Q
    | |||||||| ||||||||||||||||||||||||||||||| |||||||  |||||||||||| ||||||| |||||||||||||| ||||||||||||    
T  32607382 cattttctctttatttcaatctaaataagtgattttcacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgt 32607481  T
Q  557 cgtcttgtgcggtgttgtttgat 579  Q
    ||||||||| || ||||||||||    
T  32607482 cgtcttgtgtggcgttgtttgat 32607504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 411 - 579
Target Start/End: Original strand, 2342359 - 2342527
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatcta-ggt 509  Q
    |||| ||||||||||||||||| |  |||| || |||  | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||   |    
T  2342359 gaggggtggttttgggtcaattctaaacctgaa-tcaaccctcttcatctttttctctctatttcaatctaaataagtgattttcacatatatctatatt 2342457  T
Q  510 tttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||| |||| |||||| ||||||||||    
T  2342458 tttttctttgtgatttcatcatctaagtgtggtggtttgttattcgttgtctagtgcggcgttgtttgat 2342527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 373 - 579
Target Start/End: Complemental strand, 51202495 - 51202293
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    |||| ||||| |||||||||||||  || || |  || |||| ||| ||||||||||||| ||||||| ||||||| ||||||||| ||||||||| |||    
T  51202495 ttttttctctttaggttttctcttacagtttctttattgaggggtgattttgggtcaattcttgacctgaaatcacccatcttcatatttttctctctat 51202396  T
Q  473 ttcaatctaaataagtgattttcacatatatctaggtttttt---ctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggt 569  Q
    ||||||||||||       ||||||||| |||||||||||||   |||||||||||||| |||||||||||||||||||||||| ||||||||||||||     
T  51202395 ttcaatctaaat-------tttcacatagatctaggtttttttttctttgtgatttcatcatctaagtgtggtggtttgttgtttgtcgtcttgtgcggc 51202303  T
Q  570 gttgtttgat 579  Q
    ||||||||||    
T  51202302 gttgtttgat 51202293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 420 - 579
Target Start/End: Original strand, 22802897 - 22803057
Alignment:
Q  420 ttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtga-ttttcacatatatctaggttttttcttt 518  Q
    ||||||||||||||||||| | ||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||| || ||||||||||| ||| |    
T  22802897 ttttgggtcaatttttgacatgaaatcactcctcttcatctttttctctctatttcaatctaaataagtgatttttcacgtagatctaggttttctctat 22802996  T
Q  519 gtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||| |||| | || | ||||||| |||||||||||||||||||| ||||| ||||||||||    
T  22802997 gtgctttcgtcatttgagtgtggcggtttgttgttcgtcgtcttatgcggcgttgtttgat 22803057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 373 - 579
Target Start/End: Original strand, 12115922 - 12116133
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatca-ctcatcttcatctttttctctata 471  Q
    ||||||||||||||||||||| ||  |  || | ||| |||| ||||||||| ||||||| ||||||| |||||| ||| |||||||||||| |||| ||    
T  12115922 ttttctctctctaggttttcttttacaatttcttcattgaggggtggttttgagtcaattcttgacctgaaatcatctc-tcttcatcttttcctcttta 12116020  T
Q  472 tttcaatctaaataagtgattttcacatatatctagg----ttttttctttgtgatttcataatctaagtgtggtg-gtttgttgttcgtcgtcttgtgc 566  Q
    ||||||||||||||||||||||||||| | |||||||    |||||||||||| ||||||| ||||||||||||||  |||||||||||| |||||||||    
T  12116021 tttcaatctaaataagtgattttcacaaagatctaggttttttttttctttgtaatttcattatctaagtgtggtgattttgttgttcgttgtcttgtgc 12116120  T
Q  567 ggtgttgtttgat 579  Q
    || ||||||||||    
T  12116121 ggcgttgtttgat 12116133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 434 - 579
Target Start/End: Original strand, 42719410 - 42719552
Alignment:
Q  434 ttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatct 533  Q
    ||||||| ||||||||||||||| | ||||||||| ||||||||| |||||||||||||||||  || ||||||||||||    ||||| ||||| ||||    
T  42719410 ttgacctgaaatcactcatcttcgtatttttctctctatttcaatttaaataagtgattttcatgtagatctaggttttta---tgtgagttcatcatct 42719506  T
Q  534 aagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  42719507 aagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgat 42719552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 416 - 576
Target Start/End: Original strand, 14464379 - 14464542
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctagg---tttt 512  Q
    ||||||||||||||||| ||||||| ||||||| | | ||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |   ||||    
T  14464379 gtggttttgggtcaattcttgacctgaaatcacccctattcatctttttctctttatttcaatctaaataagtgattttcacatagatctaagttttttt 14464478  T
Q  513 ttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgttt 576  Q
    ||||||||||||||||  ||||||||||||| |||||  ||| |||| | |||||| |||||||    
T  14464479 ttctttgtgatttcatcttctaagtgtggtgatttgtcattcatcgtttcgtgcggcgttgttt 14464542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 416 - 577
Target Start/End: Original strand, 46178448 - 46178610
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtg-attttcacatatatctaggtttttt 514  Q
    |||||||||||||||||| |||||| ||||||  | ||||||||||||||||| || |||||||||||||||||  |||||||||| |||||||||||||    
T  46178448 gtggttttgggtcaatttatgacctgaaatcatccctcttcatctttttctctctaattcaatctaaataagtgctttttcacatagatctaggtttttt 46178547  T
Q  515 ctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttg 577  Q
    ||| |||||||| |  ||  ||||||||||| | ||||||||| |||||||| ||||||||||    
T  46178548 cttcgtgatttcgtcttccgagtgtggtggtgtattgttcgtcatcttgtgcagtgttgtttg 46178610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 478 - 577
Target Start/End: Complemental strand, 30648860 - 30648760
Alignment:
Q  478 tctaaataagtgattttcacatatatctaggtttttt-ctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgttt 576  Q
    ||||||||||||| ||||||||| |||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  30648860 tctaaataagtgactttcacatagatctagttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgttt 30648761  T
Q  577 g 577  Q
    |    
T  30648760 g 30648760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 416 - 514
Target Start/End: Complemental strand, 3850658 - 3850560
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggtttttt 514  Q
    |||||||||| |||||| ||||||| ||||||| | ||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||    
T  3850658 gtggttttggatcaattcttgacctgaaatcacccctcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctaggtttttt 3850560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 411 - 579
Target Start/End: Original strand, 37169097 - 37169266
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtga-ttttcacatatatctaggt 509  Q
    |||| ||| |||||| ||||||||| |||| |||||||   |||||| |||||||||| || |||||| ||||||||||| |||||||||| |||||| |    
T  37169097 gaggggtgattttggatcaattttttacctgaaatcacctctcttcacctttttctctctaattcaatataaataagtgatttttcacatagatctagat 37169196  T
Q  510 tttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||||  ||||||| | | |  |||||| |||| |||||| ||||||||||||| | ||||||||||    
T  37169197 tttttcttcttgatttcgtcacccgagtgtgatggtctgttgtccgtcgtcttgtgcagcgttgtttgat 37169266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 426 - 506
Target Start/End: Original strand, 21487993 - 21488073
Alignment:
Q  426 gtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatcta 506  Q
    ||||||||||||||| |||||||  ||||||||||||||||||  |||||||||||||||||||| |||||| || |||||    
T  21487993 gtcaatttttgacctgaaatcaccaatcttcatctttttctctccatttcaatctaaataagtgactttcacgtagatcta 21488073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 382 - 494
Target Start/End: Complemental strand, 36735389 - 36735277
Alignment:
Q  382 tctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatcta 481  Q
    |||| |||||||||||||| || | ||| |||  |||||||| ||||||||||| |||| ||||||  | ||||||| ||| ||||||||||||||| ||    
T  36735389 tctaagttttctcttctagtttcttcattgagaggtggtttttggtcaattttttacctgaaatcatccctcttcatttttctctctatatttcaattta 36735290  T
Q  482 aataagtgatttt 494  Q
    |||||||||||||    
T  36735289 aataagtgatttt 36735277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 518 - 577
Target Start/End: Complemental strand, 3849019 - 3848960
Alignment:
Q  518 tgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttg 577  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||    
T  3849019 tgtgatttcatcatgtaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttg 3848960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 359 - 573
Target Start/End: Complemental strand, 47980927 - 47980708
Alignment:
Q  359 taagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactc-atcttca 457  Q
    |||||| ||| ||||||| ||| |||||||||||||||  || || | ||| |||  ||||||||||||||||||||||||| ||||||||  |||||      
T  47980927 taagcctaccctaatttt-tctgtctaggttttctcttgcagtttcttcattgagtggtggttttgggtcaatttttgacctgaaatcactttatctttt 47980829  T
Q  458 tcttt----ttctctatatttcaatctaaataagtgatttt-cacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgt 552  Q
    ||| |    |||  |  |||||||||||||||||||||||| |||||| |||||||| |||| || |||||||| | ||   | ||||||||||||||||    
T  47980828 tctctcaatttcaatccatttcaatctaaataagtgatttttcacataaatctaggtcttttattcgtgatttcgtcattcgattgtggtggtttgttgt 47980729  T
Q  553 tcgtcgtcttgtgcggtgttg 573  Q
    || ||||||| ||||| ||||    
T  47980728 tcatcgtcttatgcggcgttg 47980708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 359 - 573
Target Start/End: Complemental strand, 47990214 - 47989995
Alignment:
Q  359 taagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactc-atcttca 457  Q
    |||||| ||| ||||||| ||| |||||||||||||||  || || | ||| |||  ||||||||||||||||||||||||| ||||||||  |||||      
T  47990214 taagcctaccctaatttt-tctgtctaggttttctcttgcagtttcttcattgagtggtggttttgggtcaatttttgacctgaaatcactttatctttt 47990116  T
Q  458 tcttt----ttctctatatttcaatctaaataagtgatttt-cacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgt 552  Q
    ||| |    |||  |  |||||||||||||||||||||||| |||||| |||||||| |||| || |||||||| | ||   | ||||||||||||||||    
T  47990115 tctctcaatttcaatccatttcaatctaaataagtgatttttcacataaatctaggtcttttattcgtgatttcgtcattcgattgtggtggtttgttgt 47990016  T
Q  553 tcgtcgtcttgtgcggtgttg 573  Q
    || ||||||| ||||| ||||    
T  47990015 tcatcgtcttatgcggcgttg 47989995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 359 - 573
Target Start/End: Complemental strand, 47999501 - 47999282
Alignment:
Q  359 taagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactc-atcttca 457  Q
    |||||| ||| ||||||| ||| |||||||||||||||  || || | ||| |||  ||||||||||||||||||||||||| ||||||||  |||||      
T  47999501 taagcctaccctaatttt-tctgtctaggttttctcttgcagtttcttcattgagtggtggttttgggtcaatttttgacctgaaatcactttatctttt 47999403  T
Q  458 tcttt----ttctctatatttcaatctaaataagtgatttt-cacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgt 552  Q
    ||| |    |||  |  |||||||||||||||||||||||| |||||| |||||||| |||| || |||||||| | ||   | ||||||||||||||||    
T  47999402 tctctcaatttcaatccatttcaatctaaataagtgatttttcacataaatctaggtcttttattcgtgatttcgtcattcgattgtggtggtttgttgt 47999303  T
Q  553 tcgtcgtcttgtgcggtgttg 573  Q
    || ||||||| ||||| ||||    
T  47999302 tcatcgtcttatgcggcgttg 47999282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 359 - 573
Target Start/End: Complemental strand, 48008788 - 48008569
Alignment:
Q  359 taagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactc-atcttca 457  Q
    |||||| ||| ||||||| ||| |||||||||||||||  || || | ||| |||  ||||||||||||||||||||||||| ||||||||  |||||      
T  48008788 taagcctaccctaatttt-tctgtctaggttttctcttgcagtttcttcattgagtggtggttttgggtcaatttttgacctgaaatcactttatctttt 48008690  T
Q  458 tcttt----ttctctatatttcaatctaaataagtgatttt-cacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgt 552  Q
    ||| |    |||  |  |||||||||||||||||||||||| |||||| |||||||| |||| || |||||||| | ||   | ||||||||||||||||    
T  48008689 tctctcaatttcaatccatttcaatctaaataagtgatttttcacataaatctaggtcttttattcgtgatttcgtcattcgattgtggtggtttgttgt 48008590  T
Q  553 tcgtcgtcttgtgcggtgttg 573  Q
    || ||||||| ||||| ||||    
T  48008589 tcatcgtcttatgcggcgttg 48008569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 378 - 517
Target Start/End: Original strand, 25849654 - 25849793
Alignment:
Q  378 tctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaa 477  Q
    |||||||||||||| ||||| || || |  || |||| ||||||||| ||||||||||||| | ||||||| | | ||| ||||||||| | ||||||||    
T  25849654 tctctctaggttttttcttccagcttcttaattgaggggtggttttgagtcaatttttgacttgaaatcacccttattcgtctttttctttctatttcaa 25849753  T
Q  478 tctaaataagtgattttcacatatatctaggttttttctt 517  Q
    |  | ||||||||| |||||||| |||||  |||||||||    
T  25849754 ttcagataagtgatgttcacatagatctaaattttttctt 25849793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 416 - 518
Target Start/End: Original strand, 33579714 - 33579817
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctc--tatatttcaatctaaataagtgattttcacatatatctaggttttt 513  Q
    ||||||||  |||| ||||||||||| |||||| | ||| |||||||||  |  | | ||||||||||||||||||||||||||||||||||| ||||||    
T  33579714 gtggttttaagtcattttttgacctagaatcacccctctacatcttttttccattttctttcaatctaaataagtgattttcacatatatcta-gttttt 33579812  T
Q  514 tcttt 518  Q
    |||||    
T  33579813 tcttt 33579817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 420 - 494
Target Start/End: Original strand, 16235269 - 16235344
Alignment:
Q  420 ttttgggtcaatttttgacctaaaatcactcatcttcatc-tttttctctatatttcaatctaaataagtgatttt 494  Q
    |||| ||||||||||||||||| |||||||||||| |||| ||||||  | | |||||||||||||||||||||||    
T  16235269 ttttaggtcaatttttgacctagaatcactcatctgcatcttttttccttttttttcaatctaaataagtgatttt 16235344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 454 - 516
Target Start/End: Complemental strand, 6913311 - 6913249
Alignment:
Q  454 ttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttct 516  Q
    ||||||| ||||||||| |||||||||| ||| |||||||||||||| ||| |||||||||||    
T  6913311 ttcatctctttctctatgtttcaatctagataggtgattttcacatagatcgaggttttttct 6913249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 509 - 579
Target Start/End: Complemental strand, 36734801 - 36734731
Alignment:
Q  509 ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||||| |||||||| | ||| || |||| |||| |||||||||||||||||||||| ||||||||||    
T  36734801 ttttttcttcgtgatttcgtcatccaaatgtgatggtgtgttgttcgtcgtcttgtgcggcgttgtttgat 36734731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 430 - 513
Target Start/End: Original strand, 53508081 - 53508166
Alignment:
Q  430 atttttgacctaaaatcactcatcttcatcttttt--ctctatatttcaatctaaataagtgattttcacatatatctaggttttt 513  Q
    ||||||||||||||||||| ||||| | |||||||  || | | ||||||| ||||||||||||||||||||||||| || |||||    
T  53508081 atttttgacctaaaatcacccatctgcgtcttttttcctttttctttcaatataaataagtgattttcacatatatcaagtttttt 53508166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 461 - 579
Target Start/End: Original strand, 31793996 - 31794106
Alignment:
Q  461 ttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtc 560  Q
    |||| ||| ||||||||||||||||||||||||||||||| |||        ||| | |||||||  | |||| ||||| ||||| |||||||||||||     
T  31793996 ttttttctctatttcaatctaaataagtgattttcacatagatc--------ttcctcgtgattttgtcatctgagtgtagtggtgtgttgttcgtcgtt 31794087  T
Q  561 ttgtgcggtgttgtttgat 579  Q
    |||||||| ||||||||||    
T  31794088 ttgtgcggcgttgtttgat 31794106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 519 - 579
Target Start/End: Complemental strand, 6910802 - 6910742
Alignment:
Q  519 gtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||| |||||||||||||||| | || |||||||| ||||||| |||||||||||    
T  6910802 gtgatttcatcatctaagtgtggtggtatattattcgtcgttttgtgcgatgttgtttgat 6910742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 531 - 579
Target Start/End: Original strand, 21488078 - 21488126
Alignment:
Q  531 tctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||||||||||| ||||||| |||||||||||||| ||||||||||    
T  21488078 tctaagtgtggtggtatgttgtttgtcgtcttgtgcggcgttgtttgat 21488126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 425 - 504
Target Start/End: Original strand, 29249099 - 29249179
Alignment:
Q  425 ggtcaatttttgacctaaaatcactcatcttcatcttttt-ctctatatttcaatctaaataagtgattttcacatatatc 504  Q
    ||||| ||||||||||| |||||||  ||||||||||||| |||| |  ||| ||||||||||||| ||||||||||||||    
T  29249099 ggtcactttttgacctagaatcacttctcttcatctttttcctctttcgttcgatctaaataagtgtttttcacatatatc 29249179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 411 - 518
Target Start/End: Complemental strand, 47042300 - 47042191
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctc---tatatttcaatctaaataagtgattttcacatatatctag 507  Q
    |||| |||||||| ||||| ||||| ||||| |||||| | ||| ||||||||| ||   | | ||||||| ||||||||||||||||||||||||| |     
T  47042300 gaggggtggttttaggtcattttttaacctataatcacccctctacatctttttttcccttttctttcaatttaaataagtgattttcacatatatc-at 47042202  T
Q  508 gttttttcttt 518  Q
    |||||||||||    
T  47042201 gttttttcttt 47042191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 421 - 500
Target Start/End: Original strand, 3606637 - 3606716
Alignment:
Q  421 tttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacata 500  Q
    |||| |||||||||| | || |||||||| |||||| ||| ||||||  ||||| ||||||||||||||||||| |||||    
T  3606637 tttgtgtcaattttttatctgaaatcactaatcttcttctctttctccctattttaatctaaataagtgattttaacata 3606716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 420 - 504
Target Start/End: Original strand, 29921903 - 29921989
Alignment:
Q  420 ttttgggtcaatttttgacctaaaatcactcatcttcatcttttt--ctctatatttcaatctaaataagtgattttcacatatatc 504  Q
    |||| ||||| ||||||| |||||||||||  ||| |||||||||  | || | |||||||||||||||||||||| ||||||||||    
T  29921903 ttttaggtcattttttgagctaaaatcacttctctccatcttttttcccctttctttcaatctaaataagtgatttccacatatatc 29921989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 420 - 504
Target Start/End: Original strand, 29971056 - 29971142
Alignment:
Q  420 ttttgggtcaatttttgacctaaaatcactcatcttcatcttttt--ctctatatttcaatctaaataagtgattttcacatatatc 504  Q
    |||| ||||| ||||||| |||||||||||  ||| |||||||||  | || | |||||||||||||||||||||| ||||||||||    
T  29971056 ttttaggtcattttttgagctaaaatcacttctctccatcttttttcccctttctttcaatctaaataagtgatttccacatatatc 29971142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 411 - 497
Target Start/End: Original strand, 40487166 - 40487254
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctc--tatatttcaatctaaataagtgattttcac 497  Q
    |||| ||| |||| ||||| ||||||||||| |||||||| ||| |||||||||| |  | | |||||||||||||||||| |||||||    
T  40487166 gaggggtgattttaggtcattttttgacctagaatcactcttctacatctttttccccttttctttcaatctaaataagtggttttcac 40487254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 472 - 579
Target Start/End: Original strand, 51923634 - 51923740
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatctaggttttttcttt-gtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtg 570  Q
    ||||||||||||||||||||||||||||  ||| ||  ||||||||| |||||||| |  ||| ||||||  | | ||||||||||| |||||||||| |    
T  51923634 tttcaatctaaataagtgattttcacatgcatcaag--tttttctttcgtgatttcgtcgtcttagtgtgacgttgtgttgttcgtcatcttgtgcggcg 51923731  T
Q  571 ttgtttgat 579  Q
    || ||||||    
T  51923732 ttatttgat 51923740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 439 - 567
Target Start/End: Original strand, 54378795 - 54378923
Alignment:
Q  439 ctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtga-ttttcacatatatctaggttttttctttgtgatttcataatctaagt 537  Q
    ||||||||| | ||||| || |||||||||  |||||||||||||| ||||| ||||||| || |||||  ||||||||| |||||||  | | || |||    
T  54378795 ctaaaatcatttatcttaatatttttctctccatttcaatctaaatgagtgatttttcacgtagatcta-attttttcttcgtgattttgtcacctgagt 54378893  T
Q  538 gtggtggtttgttgttcgtcgtcttgtgcg 567  Q
    |||||| | |||  ||||||||||||||||    
T  54378894 gtggtgatgtgtatttcgtcgtcttgtgcg 54378923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 472 - 568
Target Start/End: Complemental strand, 20609074 - 20608978
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
    |||||||||||||||||| |||| ||||||||| || ||||   ||||||||||| |  ||||| || || | | ||||||| ||||||||||||||    
T  20609074 tttcaatctaaataagtggttttaacatatatcaagtttttccttttgtgatttcgtcgtctaattgcggcgttgtgttgttagtcgtcttgtgcgg 20608978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 431 - 518
Target Start/End: Original strand, 47896012 - 47896101
Alignment:
Q  431 tttttgacctaaaatcactcatcttcatcttttt---ctctatatttcaatctaaataagtgattttcacatatatctaggttttttcttt 518  Q
    ||||||||||| |||||| | ||| |||||||||   || | | |||||||||||||||||| |||||||||||||| | |||||||||||    
T  47896012 tttttgacctagaatcacccctctacatcttttttctctttttctttcaatctaaataagtggttttcacatatatc-aagttttttcttt 47896101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 575
Target Start/End: Original strand, 1649278 - 1649433
Alignment:
Q  431 tttttgacctaaaatcactcatcttca---tctttttct--ctatatttcaatctaaataagtgattttcacatatatctaggtt------ttttctttg 519  Q
    ||||||||||| |||||||||||| ||   | |||||||  || | |||||||||||||||||| |||||||||||||| || ||      |||| ||||    
T  1649278 tttttgacctagaatcactcatctgcaatttttttttcttcctttctttcaatctaaataagtggttttcacatatatcaagattttcttgttttttttg 1649377  T
Q  520 tgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtt 575  Q
    ||||||| |  ||| ||||||| | | | ||||||  |||||||||||||||||||    
T  1649378 tgatttcgtcgtctgagtgtggcgttgtattgttctccgtcttgtgcggtgttgtt 1649433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 518
Target Start/End: Complemental strand, 36461674 - 36461570
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctc---tatatttcaatctaaataagtgattttcacatatatctaggtttt 512  Q
    |||||||| ||||| ||||||||||| | |||| | ||| |||||||||  |   | | |||||||||||||||||||||||||||| |||| | |||||    
T  36461674 gtggttttaggtcattttttgacctatattcacccctctacatcttttttccccttttctttcaatctaaataagtgattttcacatctatc-aagtttt 36461576  T
Q  513 ttcttt 518  Q
    ||||||    
T  36461575 ttcttt 36461570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 568
Target Start/End: Complemental strand, 43488818 - 43488669
Alignment:
Q  431 tttttgacctaaaatcactcatcttcatcttttt---ctctatatttcaatctaaataagtgattttcacatatatctaggttttt---------tcttt 518  Q
    ||||||||||| |||||| | ||| |||||||||   || | | |||||||||||||||||| ||||||||| |||| || |||||         | |||    
T  43488818 tttttgacctagaatcacccctctacatcttttttccctttttctttcaatctaaataagtggttttcacatctatcaagttttttcatttgtgtttttt 43488719  T
Q  519 gtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
    |||||||| |  ||||||||||| | | ||||||||||||||||||||||    
T  43488718 gtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgcgg 43488669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 499
Target Start/End: Complemental strand, 53706484 - 53706405
Alignment:
Q  420 ttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacat 499  Q
    |||| |||||||||||||| ||||||| || |||||  || |||| ||| ||||||||| ||||||||| ||||| ||||    
T  53706484 ttttaggtcaatttttgacataaaatcgcttatctttgtcattttatctctatttcaatttaaataagtcatttttacat 53706405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 472 - 579
Target Start/End: Original strand, 7546516 - 7546627
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatctaggt----tttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcg 567  Q
    ||||||||||||||||||||||||||||| ||| | ||    | ||| || |||||||| |  ||| |||| |  | | |||||||||||||||||||||    
T  7546516 tttcaatctaaataagtgattttcacatacatcaaagtcttgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcg 7546615  T
Q  568 gtgttgtttgat 579  Q
    | ||||||||||    
T  7546616 gcgttgtttgat 7546627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 504
Target Start/End: Complemental strand, 9797773 - 9797681
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatcttttt---ctctata-tttcaatctaaataagtgattttcacatatatc 504  Q
    |||||||| ||||| ||||||||||| |||||| | ||| |||||||||   |||| |  |||||||||||||||||| ||||||||| ||||    
T  9797773 gtggttttaggtcattttttgacctagaatcacccctctacatcttttttttctcttttctttcaatctaaataagtggttttcacatctatc 9797681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 431 - 490
Target Start/End: Original strand, 38142432 - 38142493
Alignment:
Q  431 tttttgacctaaaatcactcatcttcatc--tttttctctatatttcaatctaaataagtga 490  Q
    |||||||||||||||||||||||| ||||  |||||| || | |||||||| ||||||||||    
T  38142432 tttttgacctaaaatcactcatctgcatctttttttcactttctttcaatcaaaataagtga 38142493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 504
Target Start/End: Complemental strand, 50194526 - 50194436
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatc-tttttctcta-tatttcaatctaaataagtgattttcacatatatc 504  Q
    |||||||| | ||| ||||||||||||||||||   ||| |||| |||||| ||  | |||||||||||||||||||||| ||||||||||    
T  50194526 gtggttttagatcattttttgacctaaaatcacctctctgcatcctttttcccttctctttcaatctaaataagtgatttccacatatatc 50194436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 426 - 579
Target Start/End: Complemental strand, 51303871 - 51303718
Alignment:
Q  426 gtcaatttttgacctaaaatcactcatcttcatcttttt--ctctatatttcaatctaaataagtgattttcacatatatctaggttttttcttt-gtga 522  Q
    |||||||||||||||| |||||| | ||| |||||||||  | || | |||||||| |||||||||||||||||||| ||| ||  ||||||||| ||||    
T  51303871 gtcaatttttgacctagaatcaccc-tctgcatcttttttcccctttttttcaatccaaataagtgattttcacatacatcaag--tttttctttcgtga 51303775  T
Q  523 tttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||| |  | | |||| |  | | ||||||| |||||||| || |||||||||||||    
T  51303774 tttcgtcgttttagtgcgacgttgtgttgtttgtcgtcttatgaggtgttgtttgat 51303718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 431 - 518
Target Start/End: Complemental strand, 52116238 - 52116150
Alignment:
Q  431 tttttgacctaaaatcactcatcttcatctttttctc--tatatttcaatctaaataagtgattttcacatatatctaggttttttcttt 518  Q
    ||||| ||||| ||||| |||||| ||||||||| ||  | | ||| ||| ||||||||||||||||||||||||| | |||||||||||    
T  52116238 tttttaacctagaatcattcatctgcatctttttttccctttgttttaatttaaataagtgattttcacatatatc-aagttttttcttt 52116150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 564
Target Start/End: Complemental strand, 20465154 - 20465053
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatctaggtttt---------ttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtctt 562  Q
    ||||||| ||||||||||||||| ||||||||| || ||||         || |||||||||||||  |||||||| |||| | ||||||||||||||||    
T  20465154 tttcaatataaataagtgattttaacatatatcaagtttttccttttgtgttttttgtgatttcatcgtctaagtgaggtgttgtgttgttcgtcgtctt 20465055  T
Q  563 gt 564  Q
    ||    
T  20465054 gt 20465053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 500
Target Start/End: Complemental strand, 21290058 - 21289977
Alignment:
Q  420 ttttgggtcaatttttgacctaaaatcactcatcttcatcttttt-ctctatatttcaatctaaataagtgattttcacata 500  Q
    |||| ||||||||||||||||| |||||| | ||| ||||||||| | |  | |||||||| |||||||||||||| |||||    
T  21290058 ttttaggtcaatttttgacctagaatcacccctctgcatcttttttccccttctttcaatccaaataagtgattttaacata 21289977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 579
Target Start/End: Complemental strand, 12947377 - 12947345
Alignment:
Q  547 tgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||||||||||| ||||||||||    
T  12947377 tgttgttcgtcgtcttgtgcggcgttgtttgat 12947345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 579
Target Start/End: Original strand, 41818197 - 41818229
Alignment:
Q  547 tgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||||||||||||||||||| |||||||||    
T  41818197 tgttgttcgtcgtcttgtgcggtattgtttgat 41818229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 579
Target Start/End: Original strand, 51487091 - 51487123
Alignment:
Q  547 tgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||||||||||| ||||||||||    
T  51487091 tgttgttcgtcgtcttgtgcggcgttgtttgat 51487123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 143; Significance: 8e-75; HSPs: 72)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 373 - 579
Target Start/End: Complemental strand, 23425617 - 23425411
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    |||||||||| ||  ||| || ||||||||||||||| |||| ||||||||||||||||| ||||||| ||||||| | |||||||||||||||||||||    
T  23425617 ttttctctctttaaatttcctattctagattttccatggaggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctctatat 23425518  T
Q  473 ttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgtt 572  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |    
T  23425517 ttcaatctaaataagtgatttttacatagatctaggttttttctttgtgatttcatcatttaagtgtggtggtttgttgttcgtcgtcttgtgcggtgct 23425418  T
Q  573 gtttgat 579  Q
    |||||||    
T  23425417 gtttgat 23425411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 372 - 579
Target Start/End: Complemental strand, 45199278 - 45199071
Alignment:
Q  372 attttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctata 471  Q
    |||||||||||||| |||||||||||||||||||||||  ||| |||||||||| |||| | ||||||| ||||||| ||||||||||||||||||||||    
T  45199278 attttctctctctaagttttctcttctagattttccattcaggggtggttttggatcaactattgacctgaaatcacccatcttcatctttttctctata 45199179  T
Q  472 tttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgt 571  Q
    ||| ||| ||||||||||||||||| ||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |     
T  45199178 ttttaatttaaataagtgattttcatatagatctaagttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgttttgtgcggcgc 45199079  T
Q  572 tgtttgat 579  Q
    ||||||||    
T  45199078 tgtttgat 45199071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 373 - 579
Target Start/End: Original strand, 48207735 - 48207939
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    |||||||||| |||||||||||||||||||||| |||||||| |||||||||||||| || ||||||| ||||||| | |||||||||||||||| ||||    
T  48207735 ttttctctctttaggttttctcttctagatttttcatcgagg-gtggttttgggtca-ttcttgacctgaaatcacccctcttcatctttttctcaatat 48207832  T
Q  473 ttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgtt 572  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| | | |    
T  48207833 ttcaatctaaataagtgattttcacatagatctatgttttttctttgtgatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgctgcgct 48207932  T
Q  573 gtttgat 579  Q
    |||||||    
T  48207933 gtttgat 48207939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 370 - 576
Target Start/End: Complemental strand, 35496424 - 35496217
Alignment:
Q  370 taattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctcta 469  Q
    ||||||||||||| |||||||||||||   | || | ||| |||| ||||||||||||||||| |||||||||||||||  ||||||||||||||||||     
T  35496424 taattttctctctttaggttttctcttactgtttcttcattgaggggtggttttgggtcaattcttgacctaaaatcaccaatcttcatctttttctctc 35496325  T
Q  470 tatttcaatctaaataagtgattttcacatatatctaggtt-ttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
    ||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  35496324 tatttcaatctaattaagtgattttcacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcatcgtcttgtgcgg 35496225  T
Q  569 tgttgttt 576  Q
     |||||||    
T  35496224 cgttgttt 35496217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 387 - 579
Target Start/End: Complemental strand, 35667463 - 35667271
Alignment:
Q  387 gttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataa 486  Q
    |||||||||||||  |||| ||| |||| |||||||||| |||||| ||||| ||||||||| | ||||||| ||||||||| |||||||||||||||||    
T  35667463 gttttctcttctaattttttcattgaggggtggttttggatcaattcttgacttaaaatcacccttcttcatatttttctctctatttcaatctaaataa 35667364  T
Q  487 gtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  35667363 gtgattttcacatagatctaggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttttttgat 35667271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 378 - 577
Target Start/End: Complemental strand, 1485497 - 1485298
Alignment:
Q  378 tctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaa 477  Q
    ||||||||||||||||||||  | || | ||| | || |||||||||||| |||| ||||||||||||||| | ||||||||||||||||| ||||||||    
T  1485497 tctctctaggttttctcttcccgtttcttcattggggggtggttttgggttaattcttgacctaaaatcacccgtcttcatctttttctctctatttcaa 1485398  T
Q  478 tctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttg 577  Q
    ||||||||||||| ||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||    
T  1485397 tctaaataagtgactttcacatagatctagattttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgttgtttg 1485298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 360 - 579
Target Start/End: Original strand, 46821832 - 46822053
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc 459  Q
    |||||| || || |||||||||||||||||||||||| ||  |||| ||| |||| ||||||||||||||||| ||||||| ||||||| | ||||||||    
T  46821832 aagccggccctagttttctctctctaggttttctcttataattttttcattgaggggtggttttgggtcaattcttgacctgaaatcacccctcttcatc 46821931  T
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatctag--gttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtc 557  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||   |||||||||||| ||||||| |||||||| ||||| |||||||||||||    
T  46821932 tttttctctttatttcaatctaaataagtgattttcacatagatctagattttttttctttgtaatttcatcatctaagtatggtgatttgttgttcgtc 46822031  T
Q  558 gtcttgtgcggtgttgtttgat 579  Q
     |||||||||| ||||||||||    
T  46822032 ttcttgtgcggcgttgtttgat 46822053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 360 - 584
Target Start/End: Original strand, 26583532 - 26583757
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc 459  Q
    |||||| || || |||||||| |||||||||| ||||  || || | ||| |||| |||||||| |||||||| ||||||| ||||||| | ||||||||    
T  26583532 aagccggccctagttttctctttctaggttttttcttacagtttcttcattgaggggtggtttttggtcaattcttgacctgaaatcacccctcttcatc 26583631  T
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatctagg-ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcg 558  Q
    ||||| ||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  26583632 tttttatctctatttcaatctaaataagtgattttcatatatatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcatcg 26583731  T
Q  559 tcttgtgcggtgttgtttgatgtcca 584  Q
    |||||||||| |||||||||| ||||    
T  26583732 tcttgtgcggcgttgtttgatttcca 26583757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 373 - 579
Target Start/End: Original strand, 20116414 - 20116620
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    ||||||||||||| ||||||||||| || || | ||  |||| || |||||||||||||||||||||| ||||||| | ||||||||||||||| | |||    
T  20116414 ttttctctctctatgttttctcttcaagtttcttcaatgaggggtagttttgggtcaatttttgacctgaaatcacccttcttcatctttttctatctat 20116513  T
Q  473 ttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgtt 572  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||  |||||| ||||||||||||||||||||||||  |||    
T  20116514 ttcaatctaaataagtgattttcacatagatctaggttttttctttgtgatttcatcatatacatgtggttgtttgttgttcgtcgtcttgtgcgtcgtt 20116613  T
Q  573 gtttgat 579  Q
    |||||||    
T  20116614 gtttgat 20116620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 360 - 577
Target Start/End: Complemental strand, 22928129 - 22927911
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc 459  Q
    |||||| || ||||||||||||||||||||||||||||  | || | |||   || ||||||||||||||||| ||||||| ||||||| | | ||||||    
T  22928129 aagccggccctaattttctctctctaggttttctcttcccgtttcttcattagggggtggttttgggtcaattcttgacctgaaatcaccccttttcatc 22928030  T
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatctaggtttttt-ctttgtgatttcataatctaagtgtggtggtttgttgttcgtcg 558  Q
    ||||||||| ||||||||||||||||||||| ||||||| | |||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  22928029 tttttctctctatttcaatctaaataagtgactttcacacagatctagttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcg 22927930  T
Q  559 tcttgtgcggtgttgtttg 577  Q
    |||||||||| ||||||||    
T  22927929 tcttgtgcggcgttgtttg 22927911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 387 - 579
Target Start/End: Complemental strand, 42067292 - 42067100
Alignment:
Q  387 gttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataa 486  Q
    ||||||||||||||||||||||| || | ||| ||||||||||||| ||||||| |||||||   |||||||||| || |||||||||||||||||||||    
T  42067292 gttttctcttctagattttccattgaagggtgattttgggtcaattcttgacctgaaatcacctctcttcatcttgttatctatatttcaatctaaataa 42067193  T
Q  487 gtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||| || ||| |||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||| | ||||||||    
T  42067192 gtgattttcacatagatatagattttttctttctgatttcatcatctaagtgtgttggtttgttgttcgtcgtcttgtgcggcgctgtttgat 42067100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 360 - 579
Target Start/End: Original strand, 42311098 - 42311318
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc 459  Q
    ||||||||| |||||||||||||||||||||||||||  || || | ||  |||| ||||||||||||||||| ||||||| ||||||  | ||||||||    
T  42311098 aagccgaccctaattttctctctctaggttttctcttagagtttcttcactgaggggtggttttgggtcaattcttgacctgaaatcatccctcttcatc 42311197  T
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatctagg-ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcg 558  Q
     |||||||| |||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||| || ||||||||| ||||||||||||||||    
T  42311198 attttctctctatttcaatctaaataagtgatattcacatagatctaggtttttttctttgtgatttcatcatttaagtgtggcggtttgttgttcgtcg 42311297  T
Q  559 tcttgtgcggtgttgtttgat 579  Q
    |||| ||| | ||||||||||    
T  42311298 tcttatgcagcgttgtttgat 42311318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 360 - 579
Target Start/End: Complemental strand, 1449088 - 1448869
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc 459  Q
    |||||| || || ||||||||||||||||||| ||||| ||||| |   | |||| ||||||||||||||||| ||||||| |||| ||  | |||||||    
T  1449088 aagccggccctagttttctctctctaggttttttcttccagattctttgttgaggggtggttttgggtcaattcttgacctgaaataaccaaacttcatc 1448989  T
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgt 559  Q
    | ||||||| ||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||| ||||||||||||| ||||||||||||||||    
T  1448988 tctttctctctatttcaatctaaataagtgattttcacatagatctagattttttatttgtgatttcatcatctaagtgtggttgtttgttgttcgtcgt 1448889  T
Q  560 cttgtgcggtgttgtttgat 579  Q
     |||||||| ||||||||||    
T  1448888 attgtgcggcgttgtttgat 1448869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 359 - 579
Target Start/End: Original strand, 26492182 - 26492403
Alignment:
Q  359 taagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcat 458  Q
    ||||||| || || |||| ||||||||| |||| ||||  || || | ||| |||| ||||||||||||||||| ||||||| |||| || | |||||||    
T  26492182 taagccggccctagttttatctctctagattttgtcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaataacccctcttcat 26492281  T
Q  459 ctttttctctatatttcaatctaaataagtgattttcacatatatctag-gttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtc 557  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||  |||||||||||||||||||| ||||||||||||||||||||||| || |    
T  26492282 ctttttctctctatttcaatttaaataagtgattttcacatagatctagttttttttctttgtgatttcatcatctaagtgtggtggtttgttgtccgcc 26492381  T
Q  558 gtcttgtgcggtgttgtttgat 579  Q
    ||||||||| | ||||||||||    
T  26492382 gtcttgtgctgcgttgtttgat 26492403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 373 - 559
Target Start/End: Complemental strand, 2843473 - 2843288
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    ||||||||||||||||||||||||  |  || | ||| || | ||||||||||||||||| ||||||| ||| ||| | ||||||||||||||||| |||    
T  2843473 ttttctctctctaggttttctcttacaatttcttcattgaagggtggttttgggtcaattcttgacctgaaaacacccctcttcatctttttctctttat 2843374  T
Q  473 ttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgt 559  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||| |||||||||||||| |||||||||||||||    
T  2843373 ttcaatctaaataagtgattttcacatagatctaggtttttt-tttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgt 2843288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 359 - 567
Target Start/End: Original strand, 21266209 - 21266416
Alignment:
Q  359 taagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcat 458  Q
    ||||||| || || |||||||||| || ||||| ||||| || || |  || |||| ||||||||||||||||| ||||| | |||||||   |||||||    
T  21266209 taagccggccctagttttctctctttaagttttttcttccagtttctttattgaggggtggttttgggtcaattattgacatgaaatcacctctcttcat 21266308  T
Q  459 ctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcg 558  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||  |||||||| ||||||||| ||||||||||||||||||||| |||||||    
T  21266309 ctttttctctttatttcaatctaaataagtgattttcacatagatctagg-gttttctttttgatttcatcatctaagtgtggtggtttgttattcgtcg 21266407  T
Q  559 tcttgtgcg 567  Q
    |||||||||    
T  21266408 tcttgtgcg 21266416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 360 - 577
Target Start/End: Original strand, 23085340 - 23085557
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactca-tcttcat 458  Q
    ||||||||| ||||||||||||||||||||||||||||  | || | ||| | || ||||||||||||||||| ||||| | ||||||| |  |||||||    
T  23085340 aagccgaccctaattttctctctctaggttttctcttcc-gtttcttcattgggg-gtggttttgggtcaattattgacttgaaatcaccccctcttcat 23085437  T
Q  459 ctttttctctatatttcaatctaaataagtgattttcacatatatctaggtttt-ttctttgtgatttcataatctaagtgtggtggtttgttgttcgtc 557  Q
    |||||||| | ||||||||||||||||| ||| ||||||||| ||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||    
T  23085438 ctttttctttctatttcaatctaaataattgactttcacatagatctaggtttttttctttgtgattttatcatctaagtgtggtggtttgttgttcgtc 23085537  T
Q  558 gtcttgtgcggtgttgtttg 577  Q
    ||| |||||||  |||||||    
T  23085538 gtcatgtgcggcattgtttg 23085557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 370 - 577
Target Start/End: Complemental strand, 433939 - 433732
Alignment:
Q  370 taattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctcta 469  Q
    ||||||||| ||||||||||||||||||| | || | |||   || ||||||||||||||||||||||||| ||||||  | | |||||||||||||||     
T  433939 taattttctttctctaggttttctcttctggtttcttcat--tggggtggttttgggtcaatttttgacctgaaatcatcccttttcatctttttctctc 433842  T
Q  470 tatttcaatctaaataagtgattttcacatatatctag-gttttttctttgtgatttcataatctaagtgt-ggtggtttgttgttcgtcgtcttgtgcg 567  Q
    ||||||||||||||||| ||| ||||||||| ||||||  |||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||     
T  433841 tatttcaatctaaataaatgactttcacatagatctagatttttttctttgtgatttcatcatctaagtgtgggtggtttgttgttcgttgtcttgtgca 433742  T
Q  568 gtgttgtttg 577  Q
    | ||||||||    
T  433741 gcgttgtttg 433732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 417 - 579
Target Start/End: Original strand, 42408237 - 42408400
Alignment:
Q  417 tggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggtttt-ttc 515  Q
    ||||||| ||||| || ||||||| ||||||  ||||||||||||||||||| ||||||||||||||||| || |||||||||  ||||||||||| |||    
T  42408237 tggtttttggtcagttcttgacctgaaatcatccatcttcatctttttctctttatttcaatctaaataattgtttttcacatggatctaggtttttttc 42408336  T
Q  516 tttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||| | ||||||||||    
T  42408337 tttgtgatttcatcatttaagtgtggtggtttgttgttcgtcgtcttgtgcagcgttgtttgat 42408400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 420 - 579
Target Start/End: Complemental strand, 31235991 - 31235831
Alignment:
Q  420 ttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgatttt-cacatatatctaggttttttcttt 518  Q
    ||||||||||||||||||| | ||||| | | ||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||| |||      
T  31235991 ttttgggtcaatttttgacatgaaatctcccctcttcatctttttctctctatttcaatctaaataagtgatttttcacatagatctaggttttctctac 31235892  T
Q  519 gtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||| | |||||||||||| |||||||||||||||||||||||| | ||||||||||    
T  31235891 gtgatttcgtcatctaagtgtggcggtttgttgttcgtcgtcttgtgcagcgttgtttgat 31235831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 419 - 579
Target Start/End: Original strand, 46338930 - 46339092
Alignment:
Q  419 gttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctag--gttttttct 516  Q
    |||||||||||||| ||||||| |||| |  | ||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||   ||||||||    
T  46338930 gttttgggtcaattcttgacctgaaattatccctcttcatctttttctctttatttcaatgtaaataagtgattttcacatagatctagcttttttttct 46339029  T
Q  517 ttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||| ||||||| || ||||||||||| |||||||||||||||||||||||| ||||||||||    
T  46339030 ttgtaatttcatcatttaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgat 46339092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 416 - 579
Target Start/End: Complemental strand, 14628083 - 14627918
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcac-tcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggtttttt 514  Q
    ||||||||||||||| |||| |||  |||| || || ||||||||||||| ||| || |||||||||||||||||||||||||||| || ||||||||||    
T  14628083 gtggttttgggtcaaatttttaccggaaattacctcctcttcatctttttttctctaattcaatctaaataagtgattttcacataaatataggtttttt 14627984  T
Q  515 -ctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
     | |||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  14627983 tccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgat 14627918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 420 - 579
Target Start/End: Original strand, 6001899 - 6002059
Alignment:
Q  420 ttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtga-ttttcacatatatctaggttttttcttt 518  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||||||  ||||| ||||||||||||||| |||||||||| || |||||||| |||      
T  6001899 ttttggatcaatttttgacctgaaatcacccatcttcatctttttctccctattttaatctaaataagtgatttttcacatagatttaggttttctctac 6001998  T
Q  519 gtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||| | |||| ||||||| |||||||||||||||||||||||||| ||||||||||    
T  6001999 gtgatttcgtcatctgagtgtggcggtttgttgttcgtcgtcttgtgcggcgttgtttgat 6002059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 481 - 579
Target Start/End: Complemental strand, 17223136 - 17223038
Alignment:
Q  481 aaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||| || |||||||    
T  17223136 aaataagtgattttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtgatttgttgttcatcgtcttgtgcggcgtggtttgat 17223038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 473 - 579
Target Start/End: Original strand, 23786508 - 23786613
Alignment:
Q  473 ttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgtt 572  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||| |||    
T  23786508 ttcaatctaaataagtgattttcacacatatctaaattttttctttgtgatt-catcatctaagtgtggtggtttgttgttcgtcgtcttctgcggcgtt 23786606  T
Q  573 gtttgat 579  Q
    |||||||    
T  23786607 gtttgat 23786613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 376 - 525
Target Start/End: Original strand, 32684519 - 32684671
Alignment:
Q  376 tctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttc 475  Q
    |||||||||||||||||||||   | || | ||| |||| ||||||||||||||||| ||||||| |||||||   |||||||| |||||||| ||||||    
T  32684519 tctctctctaggttttctcttacggtttcttcattgaggggtggttttgggtcaattcttgacctgaaatcacatgtcttcatcgttttctctctatttc 32684618  T
Q  476 aatctaaataagtgattttcacatatatctaggttt---tttctttgtgattt 525  Q
    ||||||||||||||||||||||||| ||||||||||   ||||||||||||||    
T  32684619 aatctaaataagtgattttcacatagatctaggtttttctttctttgtgattt 32684671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 373 - 567
Target Start/End: Complemental strand, 17499892 - 17499710
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    |||| ||||| ||| ||||||||||||| || | ||| |||| || ||||||||||||| ||| |||||||||||||||||||||||||||||           
T  17499892 ttttttctctttagattttctcttctagtttcttcattgaggggtagttttgggtcaatatttaacctaaaatcactcatcttcatctttttc------- 17499800  T
Q  473 ttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcg 567  Q
         ||||||||||| ||||||||| | |||||||||||||| |||||||||||| |||||||||| ||||| | ||||||  |||||||||||    
T  17499799 -----tctaaataagttattttcacaaagatctaggttttttcattgtgatttcatcatctaagtgtagtggtgtattgttcaccgtcttgtgcg 17499710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 373 - 567
Target Start/End: Original strand, 17553322 - 17553504
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    |||| ||||| ||| ||||||||||||| || | ||| |||| || ||||||||||||| ||| |||||||||||||||||||||||||||||           
T  17553322 ttttttctctttagattttctcttctagtttcttcattgaggggtagttttgggtcaatatttaacctaaaatcactcatcttcatctttttc------- 17553414  T
Q  473 ttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcg 567  Q
         ||||||||||| ||||||||| | |||||||||||||| |||||||||||| |||||||||| ||||| | ||||||  |||||||||||    
T  17553415 -----tctaaataagttattttcacaaagatctaggttttttcattgtgatttcatcatctaagtgtagtggtgtattgttcaccgtcttgtgcg 17553504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 419 - 561
Target Start/End: Original strand, 35261174 - 35261319
Alignment:
Q  419 gttttgggtcaatttttgacctaaaatcactcatcttcatctttttct-ctatatttcaatctaaataagtgattttcacatatatctag--gttttttc 515  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||  |  ||||||||| |||||||||||||||||||| || |||   |||||||    
T  35261174 gttttgggccaatttttgacctaaaatcacccatcttcatctttttctagtccatttcaatccaaataagtgattttcacataaatttagattttttttc 35261273  T
Q  516 tttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtct 561  Q
    || |||||||| | ||| ||||||||| || |||||||||||||||    
T  35261274 ttcgtgatttcgtcatccaagtgtggttgtgtgttgttcgtcgtct 35261319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 379 - 579
Target Start/End: Complemental strand, 32522170 - 32521966
Alignment:
Q  379 ctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttt-----tctctatatt 473  Q
    ||||||||||||||||||| |  || | ||| ||||  ||||||| |||| |  |||||||| ||||||| ||||||||||||||     ||||| ||||    
T  32522170 ctctctaggttttctcttccaacttcttcattgagggatggttttaggtcga-atttgacctgaaatcacccatcttcatcttttttttctctctctatt 32522072  T
Q  474 tcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttg 573  Q
    ||||| ||||||||||||||||||||| || || |||||||||| || |||||   |||| |||||||| || ||||||||||| |||||||||| ||||    
T  32522071 tcaatttaaataagtgattttcacatagatttatgttttttcttcgttatttcgccatctgagtgtggttgtgtgttgttcgtcatcttgtgcggcgttg 32521972  T
Q  574 tttgat 579  Q
    ||||||    
T  32521971 tttgat 32521966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 416 - 579
Target Start/End: Complemental strand, 1100968 - 1100806
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttc 515  Q
    |||| |||||||||| ||||||||  ||| ||||||||||||||||||||||| ||||||||| | || ||||||||||  |||||||||| ||||||||    
T  1100968 gtggctttgggtcaaattttgacccgaaaccactcatcttcatctttttctctctatttcaattttaacaagtgatttttgcatatatcta-gttttttc 1100870  T
Q  516 tttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    || ||||||||||  | | | |  || | | |||||||| ||||||||||||||||||||||||    
T  1100869 ttcgtgatttcatcgtatgaatccggcgatatgttgttcatcgtcttgtgcggtgttgtttgat 1100806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 483 - 564
Target Start/End: Original strand, 6558817 - 6558900
Alignment:
Q  483 ataagtgattttcacatatatctaggttttt--tctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgt 564  Q
    |||||||||||||||||| || |||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6558817 ataagtgattttcacatagatttaggtttttcttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgt 6558900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 450 - 551
Target Start/End: Original strand, 36143774 - 36143875
Alignment:
Q  450 catcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgt 549  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||| || |||||||||||||||| |||||||| |  ||| ||||||||||| |||    
T  36143774 catcttcatctttttctctctaattcaatctaaataagtgtttttcacgtagatctaggttttttcttcgtgatttcgtcgtctgagtgtggtggtgtgt 36143873  T
Q  550 tg 551  Q
    ||    
T  36143874 tg 36143875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 411 - 579
Target Start/End: Original strand, 17611000 - 17611163
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctc-tatatttcaatctaaataagtgattttcacatatatctaggt 509  Q
    |||| |||||||| ||||||||| |||||| ||||||| | |||||||||||||||  |  |||||||| ||||      ||||||||||| | |||| |    
T  17611000 gaggggtggttttaggtcaatttatgacctgaaatcacccctcttcatctttttctagtccatttcaatttaaa------attttcacataaaactagat 17611093  T
Q  510 tttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||| |||||||| | |||  ||||||||||| |||| ||||||||||||||||| ||||||||||    
T  17611094 tttttcttcgtgatttcgtcatccgagtgtggtggtgtgttattcgtcgtcttgtgcggagttgtttgat 17611163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 461 - 537
Target Start/End: Original strand, 7740559 - 7740635
Alignment:
Q  461 ttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagt 537  Q
    |||| ||||||||||||| ||||||| | ||||||||||| || ||| |||||||||||||||||||||||||||||    
T  7740559 ttttttctatatttcaatttaaataaattattttcacatagatttagattttttctttgtgatttcataatctaagt 7740635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 411 - 579
Target Start/End: Complemental strand, 1749389 - 1749222
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatcttttt-ctctatatttcaatctaaataagtgattttcacatatatctaggt 509  Q
    |||| ||| |||| ||||||||||||||||| |||||| |  |||||||||||| | || | ||||||||||||||||||||||||||||| ||| ||      
T  1749389 gaggggtgattttaggtcaatttttgacctagaatcacccg-cttcatcttttttccctttctttcaatctaaataagtgattttcacatacatcaag-- 1749293  T
Q  510 tttttcttt-gtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||||| |||||||| |  ||| |||| |  | | ||||||||||||||||||||||  |||||||||    
T  1749292 tttttctttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcattgtttgat 1749222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 416 - 551
Target Start/End: Original strand, 20083206 - 20083343
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcac--atatatctagg-tttt 512  Q
    |||||||| ||| |||||||||||||||||  | | ||||||||||||||| | ||||||||||||||||||  ||||||||  ||||||||||| ||||    
T  20083206 gtggttttaggttaatttttgacctaaaataccac-tcttcatctttttctttctatttcaatctaaataagcaattttcacatatatatctaggttttt 20083304  T
Q  513 ttctttgtgatttcataatctaagtgtggtggtttgttg 551  Q
    |||||  |||||||   ||||||||||| |||| |||||    
T  20083305 ttcttcatgatttcgacatctaagtgtgatggtgtgttg 20083343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 418 - 528
Target Start/End: Original strand, 3860828 - 3860937
Alignment:
Q  418 ggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctt 517  Q
    ||||||| |||||||||| || | |||||||   |||| |||||||||||| | ||||||| ||||||||||||||||||||| |||| || ||||||||    
T  3860828 ggttttgtgtcaatttttaacttgaaatcacatctctttatctttttctctttgtttcaatataaataagtgattttcacatagatcttgg-tttttctt 3860926  T
Q  518 tgtgatttcat 528  Q
     ||||||||||    
T  3860927 cgtgatttcat 3860937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 473 - 577
Target Start/End: Complemental strand, 7640928 - 7640813
Alignment:
Q  473 ttcaatctaaataagtgattttcacatatatctaggttttttcttt-----------gtgatttcataatctaagtgtggtggtttgttgttcgtcgtct 561  Q
    |||||||||||||||||||||||||||| || |||||||||| |||           |||||||||| |||||||||||||||||||||| |||||| ||    
T  7640928 ttcaatctaaataagtgattttcacatagatataggtttttttttttttttttttttgtgatttcatcatctaagtgtggtggtttgttgctcgtcgcct 7640829  T
Q  562 tgtgcggtgttgtttg 577  Q
    |||| || ||||||||    
T  7640828 tgtgaggcgttgtttg 7640813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 485 - 579
Target Start/End: Original strand, 34773653 - 34773749
Alignment:
Q  485 aagtgattttcacatatatctaggtttt--ttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||| ||||| ||||| |||||  |||||||| |||| || |||||||||||||| |||||| ||||||||||| ||||| ||||||||||    
T  34773653 aagtgatttttacatagatctaagttttttttctttgtaatttgatcatctaagtgtggtgatttgttattcgtcgtcttatgcggcgttgtttgat 34773749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 411 - 579
Target Start/End: Original strand, 35132794 - 35132963
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatcttttt--ctctatatttcaatctaaataagtgattttcacatatatctagg 508  Q
    |||| ||| |||| ||||||||||||||||| |||||| | ||| |||||||||  | || | ||| ||||||||||||||||||||||||| ||| ||     
T  35132794 gaggggtgattttaggtcaatttttgacctagaatcacccctctacatcttttttcccctttcttttaatctaaataagtgattttcacatacatcaag- 35132892  T
Q  509 ttttttcttt-gtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
     ||||||||| |||||||| |  ||| |||| |  | | |||||||||||||||||| ||| ||||||||||    
T  35132893 -tttttctttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgttcggcgttgtttgat 35132963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 472 - 567
Target Start/End: Original strand, 24770161 - 24770257
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatctaggttttttc-tttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcg 567  Q
    |||||||||||||||||| |||||||||||||| |  ||||||| ||||||||||| |  |||||||| |||| | |||||||||||||||| ||||    
T  24770161 tttcaatctaaataagtggttttcacatatatcaaatttttttcttttgtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttatgcg 24770257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 442 - 541
Target Start/End: Complemental strand, 1575253 - 1575153
Alignment:
Q  442 aaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggt-tttttctttgtgatttcataatctaagtgtg 540  Q
    ||||||||||||||||||||||||||  ||||||||| || |||||| ||| || |||| |||||  | |||||||||||||||||||  ||||| ||||    
T  1575253 aaatcactcatcttcatctttttctccttatttcaatttacataagttattgtcgcatagatctaattatttttctttgtgatttcatcgtctaaatgtg 1575154  T
Q  541 g 541  Q
    |    
T  1575153 g 1575153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 417 - 568
Target Start/End: Complemental strand, 9450379 - 9450216
Alignment:
Q  417 tggttttgggtcaatttttgacctaaaatcactcatcttcatctt-tttctc--tatatttcaatctaaataagtgattttcacatatatctaggtt--- 510  Q
    ||||||| ||||| ||||||||||| |||||| ||||| |||||| |||| |  | | |||||||||||||||||||||||||||| ||||||| ||       
T  9450379 tggttttaggtcattttttgacctagaatcacccatctacatcttgtttccccttttctttcaatctaaataagtgattttcacatctatctagtttctc 9450280  T
Q  511 ------ttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
          | || ||||||||||| |  ||||||||||| | | ||||||||||||||||||||||    
T  9450279 cttttgtgttttttgtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgcgg 9450216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 360 - 448
Target Start/End: Complemental strand, 12539214 - 12539126
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcac 448  Q
    ||||||||| || |||||||||||||| |||||||||| || || | ||| |||| |||||||| |||||||| ||||||| |||||||    
T  12539214 aagccgaccctagttttctctctctagattttctcttccagtttcttcattgaggggtggtttttggtcaattcttgacctgaaatcac 12539126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 460 - 514
Target Start/End: Original strand, 5546277 - 5546331
Alignment:
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatctaggtttttt 514  Q
    ||||||||| ||||||||||||||||||||||||||||||| || || |||||||    
T  5546277 tttttctctctatttcaatctaaataagtgattttcacataaatttaagtttttt 5546331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 420 - 504
Target Start/End: Complemental strand, 5078632 - 5078547
Alignment:
Q  420 ttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctat-atttcaatctaaataagtgattttcacatatatc 504  Q
    |||| ||||| ||||||||||| |||||| | ||| ||||||| |||| || ||||| |||||||||||||||||| |||||||||    
T  5078632 ttttaggtcattttttgacctagaatcacccctctgcatctttctctccattatttcgatctaaataagtgatttttacatatatc 5078547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 411 - 568
Target Start/End: Complemental strand, 37837706 - 37837537
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctc--tatatttcaatctaaataagtgattttcacatatatctagg 508  Q
    |||| |||||||| ||||| ||||||||||| |||||| | ||| |||||||||  |  | | |||||||||||||||||| ||| ||||||||| || |    
T  37837706 gaggggtggttttaggtcattttttgacctagaatcacccctctacatcttttttcccttttctttcaatctaaataagtggtttacacatatat-taag 37837608  T
Q  509 ttttttc-----------tttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
    |||||||           ||||||||||||| ||||||||| || | | ||||||||||||||||||||||    
T  37837607 ttttttcttttgtgtttttttgtgatttcatcatctaagtgcggcgttgtgttgttcgtcgtcttgtgcgg 37837537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 419 - 572
Target Start/End: Original strand, 40993032 - 40993198
Alignment:
Q  419 gttttgggtcaatttttgacctaaaatcactcatcttcatctttttctc----tatatttcaatctaaataagtgattttcacatatatctaggtttt-- 512  Q
    ||||| ||||| |||||||||||||||||||| ||| ||||||||| ||    | | |||||||||||||||||| ||||||||| |||| || ||||      
T  40993032 gttttaggtcattttttgacctaaaatcactcctctacatctttttttccacttttctttcaatctaaataagtggttttcacatctatcaagtttttcc 40993131  T
Q  513 -------ttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgtt 572  Q
           || ||||||||||| |  |||||||| || | | ||||||||||| ||||||||||||||    
T  40993132 ttttgtgttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcatcttgtgcggtgtt 40993198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 511 - 579
Target Start/End: Original strand, 3394426 - 3394494
Alignment:
Q  511 ttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||| ||||||||||  ||| |||| |||| | ||||||||||||||||||| |||||||||||||    
T  3394426 ttttcttcgtgatttcatcgtctgagtgcggtgttgtgttgttcgtcgtcttgtgtggtgttgtttgat 3394494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 411 - 500
Target Start/End: Complemental strand, 24351091 - 24351000
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc--tttttctctatatttcaatctaaataagtgattttcacata 500  Q
    |||| ||| |||| ||||||||||||||||| |||||| | | | ||||  |||||| || | |||||||||||||||||||||||||||||    
T  24351091 gaggggtgattttaggtcaatttttgacctagaatcacccctgtgcatccttttttccctttctttcaatctaaataagtgattttcacata 24351000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 416 - 500
Target Start/End: Complemental strand, 19404997 - 19404911
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctc--tatatttcaatctaaataagtgattttcacata 500  Q
    |||||||| ||||| ||||||||||| |||||| | ||| ||||||||| ||  | | |||||||||||||||||| ||||||||||    
T  19404997 gtggttttaggtcattttttgacctagaatcacccctctacatctttttttccttttctttcaatctaaataagtggttttcacata 19404911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 514
Target Start/End: Complemental strand, 286720 - 286682
Alignment:
Q  476 aatctaaataagtgattttcacatatatctaggtttttt 514  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  286720 aatctaaataagtgatttccacatatatctaggtttttt 286682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 526
Target Start/End: Complemental strand, 43369908 - 43369858
Alignment:
Q  476 aatctaaataagtgattttcacatatatctaggttttttctttgtgatttc 526  Q
    ||||||||||||||||||||||||| || || |||||||||| ||||||||    
T  43369908 aatctaaataagtgattttcacatagatataagttttttcttcgtgatttc 43369858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 579
Target Start/End: Complemental strand, 46818577 - 46818455
Alignment:
Q  458 tctttttctctatatttcaatctaaataagtga-ttttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgt 556  Q
    ||||||||||| |   ||||||||||||||||| |||||||||| || | |||||||||||  ||||||| | |||  ||||||| |||  ||||||||     
T  46818577 tctttttctctctcgctcaatctaaataagtgatttttcacataaattttggttttttcttcatgatttcgtcatccgagtgtggcggtgcgttgttcga 46818478  T
Q  557 cgtcttgtgcggtgttgtttgat 579  Q
      |||||||||| ||||||||||    
T  46818477 aatcttgtgcggcgttgtttgat 46818455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 430 - 504
Target Start/End: Original strand, 27996951 - 27997027
Alignment:
Q  430 atttttgacctaaaatcactcatcttcatctttttct--ctatatttcaatctaaataagtgattttcacatatatc 504  Q
    |||||||||||| ||||||| |||| ||||||||| |  || | |||||||||||||||  ||||||||||||||||    
T  27996951 atttttgacctagaatcacttatctacatcttttttttcctttctttcaatctaaataatagattttcacatatatc 27997027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 500
Target Start/End: Original strand, 22742781 - 22742872
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatcttttt--ctctatatttcaatctaaataagtgattttcacata 500  Q
    |||| ||| |||| ||||||||||| | ||| |||||| | ||| |||||||||  | || | |||||||||||||||||||||||||||||    
T  22742781 gaggggtgattttaggtcaatttttaatctagaatcacccctctgcatcttttttcccctttctttcaatctaaataagtgattttcacata 22742872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 518
Target Start/End: Complemental strand, 45350044 - 45349942
Alignment:
Q  417 tggttttgggtcaatttttgacctaaaatcactcatcttcatcttttt--ctctatatttcaatctaaataagtgattttcacatatatctaggtttttt 514  Q
    ||||||| ||||| ||||||||||| |||||| ||||| | |||||||  || | | ||||||| |||||||||| ||||||| |||| | |||||||||    
T  45350044 tggttttaggtcattttttgacctagaatcacccatctacttcttttttcctttttctttcaatttaaataagtggttttcacgtata-ccaggtttttt 45349946  T
Q  515 cttt 518  Q
    ||||    
T  45349945 cttt 45349942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 568
Target Start/End: Original strand, 47590175 - 47590323
Alignment:
Q  430 atttttgacctaaaatcactcatcttcatctttttctctata-tttcaatctaaataagtgattttcacatatatctaggtttt---------ttctttg 519  Q
    |||||||| ||| |||||| | ||| ||| |||||| ||||  |||||||||||||||||| |||||||||||||| || ||||         || ||||    
T  47590175 atttttgaactagaatcacccctctacatttttttccctattctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtgttttttg 47590274  T
Q  520 tgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
    ||||||| |  |||||||| || | | ||||||||||||||||||||||    
T  47590275 tgatttcgttgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgg 47590323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 514
Target Start/End: Complemental strand, 1097771 - 1097708
Alignment:
Q  451 atcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggtttttt 514  Q
    |||||||||||||| | | ||||||||| |||||||||| |||| ||||| |||||| ||||||    
T  1097771 atcttcatctttttttatctatttcaatttaaataagtgttttttacatagatctagttttttt 1097708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 568
Target Start/End: Complemental strand, 12141556 - 12141387
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctc----tatatttcaatctaaataagtgattttcacatatatcta 506  Q
    |||| |||||||| ||||| |||||||| || |||||| | ||| |||||||||  |    | |||||||||||||||||||| ||||||||| |||| |    
T  12141556 gaggggtggttttaggtcattttttgacatagaatcacccctctacatcttttttcccttttttatttcaatctaaataagtggttttcacatctatcaa 12141457  T
Q  507 ggttttt--------tctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
    | |||||        | ||||||||||| |  |||||||| || | ||||||||| ||||||||||||||    
T  12141456 gttttttcttttgtgtttttgtgatttcgtcgtctaagtgcggcgttttgttgtttgtcgtcttgtgcgg 12141387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 500
Target Start/End: Original strand, 28476066 - 28476155
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctc-tatatttcaatctaaataagtgattttcacata 500  Q
    |||| ||| |||| ||||||||||||||||| |||||| |  | | || |||||||| | | |||||||||||||||||||||||||||||    
T  28476066 gaggggtgattttaggtcaatttttgacctagaatcaccccgcat-atttttttctcctttctttcaatctaaataagtgattttcacata 28476155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 504
Target Start/End: Complemental strand, 30757067 - 30756971
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctc---tatatttcaatctaaataagtgattttcacatatatc 504  Q
    |||| |||||||| ||| | ||||||||||| |||||| | ||| |||||||||  |   | | |||||||||||||||||||||||||||| ||||    
T  30757067 gaggggtggttttaggtaattttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtgattttcacatctatc 30756971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 545 - 579
Target Start/End: Original strand, 32684672 - 32684706
Alignment:
Q  545 tttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||||||||||||| ||||||||||    
T  32684672 tttgttgttcgtcgtcttgtgcggcgttgtttgat 32684706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 513
Target Start/End: Original strand, 48930686 - 48930727
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatctaggttttt 513  Q
    ||||||||||||||||||||||||||||| ||| || |||||    
T  48930686 tttcaatctaaataagtgattttcacatacatcaagtttttt 48930727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 516 - 568
Target Start/End: Complemental strand, 8001677 - 8001625
Alignment:
Q  516 tttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
    ||||||||||| |  |||||||| || | ||||||||||||||||||||||||    
T  8001677 tttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcgg 8001625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 481 - 525
Target Start/End: Original strand, 8319376 - 8319420
Alignment:
Q  481 aaataagtgattttcacatatatctaggttttttctttgtgattt 525  Q
    ||||||||||||||||||||||| ||| |||||  ||||||||||    
T  8319376 aaataagtgattttcacatatatttagttttttattttgtgattt 8319420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 579
Target Start/End: Original strand, 22742928 - 22742960
Alignment:
Q  547 tgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||||||||||| ||||||||||    
T  22742928 tgttgttcgtcgtcttgtgcggcgttgtttgat 22742960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 579
Target Start/End: Complemental strand, 24350944 - 24350912
Alignment:
Q  547 tgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||||||||||| ||||||||||    
T  24350944 tgttgttcgtcgtcttgtgcggcgttgtttgat 24350912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 579
Target Start/End: Original strand, 28476211 - 28476243
Alignment:
Q  547 tgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||||||||||| ||||||||||    
T  28476211 tgttgttcgtcgtcttgtgcggcgttgtttgat 28476243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 420 - 504
Target Start/End: Original strand, 39228867 - 39228954
Alignment:
Q  420 ttttgggtcaatttttgacctaaaatcac-tcatcttcatctttttctctatatttc--aatctaaataagtgattttcacatatatc 504  Q
    |||| ||||| ||||||||||| |||||| || ||| |||||||||||| | ||||   |||||||||||||| |||||||| |||||    
T  39228867 ttttaggtcattttttgacctagaatcacctcctctgcatctttttctcaaaattttttaatctaaataagtggttttcacacatatc 39228954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 452 - 500
Target Start/End: Complemental strand, 46244439 - 46244391
Alignment:
Q  452 tcttcatctttttctctatatttcaatctaaataagtgattttcacata 500  Q
    ||||| |||||||||||| |||  ||| |||||||||||||||||||||    
T  46244439 tcttcttctttttctctaaattaaaatataaataagtgattttcacata 46244391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 141; Significance: 1e-73; HSPs: 70)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 364 - 568
Target Start/End: Complemental strand, 21060536 - 21060332
Alignment:
Q  364 cgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttt 463  Q
    ||||| || ||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| |||| || |||||||   ||||||||||||    
T  21060536 cgaccctagttttctctctctaggttttctcttctagatttttcatcgagtggtggttttgggtcaattcttgatctgaaatcaccactcttcatctttt 21060437  T
Q  464 tctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttg 563  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||    
T  21060436 tctctatatttcaatctaaataagtgattttcacatagatgtaggttttttcttcgtgatgtcatcatctaagtgtggtggtttgttgttcgtcgtcttg 21060337  T
Q  564 tgcgg 568  Q
    |||||    
T  21060336 tgcgg 21060332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 370 - 577
Target Start/End: Complemental strand, 19281193 - 19280986
Alignment:
Q  370 taattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctcta 469  Q
    ||||||||||||||||||||||||| ||  | || | ||| | || |||||||||||| |||||||||||  ||||||| |||||||||||||||||||     
T  19281193 taattttctctctctaggttttctcatcccgtttcttcattggggggtggttttgggtaaatttttgaccggaaatcacccatcttcatctttttctctc 19281094  T
Q  470 tatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggt 569  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |     
T  19281093 tatttcaatctaaataagtgactttcacacatatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagc 19280994  T
Q  570 gttgtttg 577  Q
    ||||||||    
T  19280993 gttgtttg 19280986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 373 - 568
Target Start/End: Original strand, 781223 - 781418
Alignment:
Q  373 ttttctctctctaggttttct-cttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctata 471  Q
    |||||||||| |||||||| | ||| ||||||||||||||||| |||||||||| |||||| ||||||| ||||||| ||||||||||||||||||||||    
T  781223 ttttctctctttaggtttttttcttttagattttccatcgagg-gtggttttggttcaattcttgacctgaaatcacccatcttcatctttttctctata 781321  T
Q  472 tttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
    ||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||    
T  781322 tttcaatctaaataagtgattttcagatagatctagggtttttctttgtgatttcatcatctaagtatggtggtttgttgttcgtcgtcatgtgcgg 781418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 373 - 568
Target Start/End: Complemental strand, 27267106 - 27266909
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    |||||||||||||||||||||||||  | || | || ||| | ||||||||||||||||| ||||||| ||||||| | ||||||| ||||||||| |||    
T  27267106 ttttctctctctaggttttctcttcccgtttcttcaccgaagggtggttttgggtcaattcttgacctgaaatcacccctcttcatatttttctctctat 27267007  T
Q  473 ttcaatctaaataagtgattttcacatatatctaggtt--ttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
    |||||||||||||||||||||||||||| |||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  27267006 ttcaatctaaataagtgattttcacatagatctaggttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 27266909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 370 - 579
Target Start/End: Complemental strand, 36344738 - 36344530
Alignment:
Q  370 taattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctcta 469  Q
    ||||||| ||||||||| |||||||||| |  || | ||| |||| ||||||||| ||| ||| ||||||||||||||| | ||||||||||||||||||    
T  36344738 taattttttctctctagattttctcttccaatttcttcattgaggggtggttttgagtcgattcttgacctaaaatcacccctcttcatctttttctcta 36344639  T
Q  470 tatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggt 569  Q
    ||||||||||||||||||| ||||||||||  ||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||     
T  36344638 tatttcaatctaaataagttattttcacatggatctaagttttttctttgtgattt-atcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggc 36344540  T
Q  570 gttgtttgat 579  Q
    ||||||||||    
T  36344539 gttgtttgat 36344530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 360 - 568
Target Start/End: Original strand, 7246779 - 7246988
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc 459  Q
    |||||| || ||||||||||||||||||||||||||||  | || | ||| | || ||||||||||||||||| || |||| ||| ||| | ||||||||    
T  7246779 aagccggccctaattttctctctctaggttttctcttcccgtttcttcattggggggtggttttgggtcaattcttaacctgaaaccacccctcttcatc 7246878  T
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatctagg-ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcg 558  Q
    ||||||||| ||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  7246879 tttttctctctatttcaatctaaataagtgactttcacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtgatttgttgttcgtcg 7246978  T
Q  559 tcttgtgcgg 568  Q
    ||||||||||    
T  7246979 tcttgtgcgg 7246988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 373 - 579
Target Start/End: Original strand, 30371558 - 30371766
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    |||||||| |||||||||||||||  |  || | ||| |||| |||||||||||||||| |||||||| ||||||| | ||||||||||||||||| |||    
T  30371558 ttttctctatctaggttttctcttacaatttcttcattgaggggtggttttgggtcaatatttgacctgaaatcacccctcttcatctttttctctttat 30371657  T
Q  473 ttcaatctaaataagtgattttcacatatatctagg--ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtg 570  Q
    |||||||||||||||||||||||||||| |||||||  |||||||||||| ||||||| |||||||||||||| ||||||||||||| |||||||||| |    
T  30371658 ttcaatctaaataagtgattttcacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcatcttgtgcggcg 30371757  T
Q  571 ttgtttgat 579  Q
    |||||||||    
T  30371758 ttgtttgat 30371766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 360 - 568
Target Start/End: Original strand, 7241603 - 7241812
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc 459  Q
    |||||| || ||||||||||||||||||||||||||||  | || | ||| | || ||||||||||||||||| || |||| ||| ||| | ||||||||    
T  7241603 aagccggccctaattttctctctctaggttttctcttcccgtttcttcattggggggtggttttgggtcaattcttaacctgaaaccacccctcttcatc 7241702  T
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatctagg-ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcg 558  Q
    ||||||||| ||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||| |||||| ||||||| ||||||||||||||    
T  7241703 tttttctctctatttcaatctaaataagtgactttcacatagatctaggtttttttctttgtgatttcatcatctaattgtggtgatttgttgttcgtcg 7241802  T
Q  559 tcttgtgcgg 568  Q
    ||||||||||    
T  7241803 tcttgtgcgg 7241812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 387 - 568
Target Start/End: Original strand, 16981138 - 16981319
Alignment:
Q  387 gttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataa 486  Q
    ||||||||||| |  || | ||| |||| ||||| |||| |||||| ||||||| ||||||||| ||||||| ||||||||| |||||||||||||||||    
T  16981138 gttttctcttccattttcttcattgaggggtggtattggatcaattcttgacctgaaatcactcctcttcatatttttctctctatttcaatctaaataa 16981237  T
Q  487 gtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  16981238 gtgatttacacatatatctaggttttttctttgtgatttcatcatctaagtgcggtggtttgttgttcgtcgtcttgtgcgg 16981319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 373 - 577
Target Start/End: Complemental strand, 7150581 - 7150376
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    |||||||||||||||||||||||||  | || | |||   ||  ||||||||| | |||||||||||| ||||||| | ||||||||||||||||| |||    
T  7150581 ttttctctctctaggttttctcttcccgtttcttcattcggggatggttttggattaatttttgacctgaaatcacccctcttcatctttttctctctat 7150482  T
Q  473 ttcaatctaaataagtgattttcacatatatct-aggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgt 571  Q
    |||||||||||||||||| ||||||||| |||| || ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  7150481 ttcaatctaaataagtgactttcacatagatctaagtttttttctttgtgctttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgt 7150382  T
Q  572 tgtttg 577  Q
    ||||||    
T  7150381 tgtttg 7150376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 370 - 579
Target Start/End: Complemental strand, 18677715 - 18677504
Alignment:
Q  370 taattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctcta 469  Q
    |||||||||| ||||||||||||| ||   | || | ||| |||| ||||||||||||||||| |||| || ||||||  | |||||||||||||||||     
T  18677715 taattttctccctctaggttttcttttaccgtttcttcattgaggggtggttttgggtcaattattgatctgaaatcatccctcttcatctttttctctc 18677616  T
Q  470 tatttcaatctaaataagtgattttcacatatatctaggtt--ttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcg 567  Q
    ||||| ||||||||||||||||||||||||| |||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  18677615 tattttaatctaaataagtgattttcacatagatctaggttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtggg 18677516  T
Q  568 gtgttgtttgat 579  Q
      ||||||||||    
T  18677515 acgttgtttgat 18677504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 387 - 579
Target Start/End: Complemental strand, 35475568 - 35475376
Alignment:
Q  387 gttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataa 486  Q
    ||||||||||||||||||||||| |||| ||| |||||||| |||| |||| || |||||||   |||||||||| || |||||||||||||||||||||    
T  35475568 gttttctcttctagattttccattgaggggtgattttgggttaattcttgatctgaaatcacctctcttcatcttgttatctatatttcaatctaaataa 35475469  T
Q  487 gtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||| |||||| |||||||||||||||||||| || || |||||||||||||||||||||||| || ||||| | ||||||||    
T  35475468 gtgattttcacatagatctagattttttctttgtgatttcatcatttacgtgtggtggtttgttgttcgtcgttttatgcggcgctgtttgat 35475376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 414 - 577
Target Start/End: Original strand, 43148605 - 43148769
Alignment:
Q  414 gtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggtttt- 512  Q
    ||||||||||||||||||| ||||| |||||| | |||| |||||| |||||||| |||||| |||||||||||||| |||||||||||| ||| ||||     
T  43148605 gtgtggttttgggtcaattcttgacttaaaattattcattttcatccttttctctctatttcgatctaaataagtgactttcacatatatttagattttt 43148704  T
Q  513 ttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttg 577  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43148705 ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttg 43148769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 434 - 579
Target Start/End: Complemental strand, 2058023 - 2057877
Alignment:
Q  434 ttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggtt-ttttctttgtgatttcataatc 532  Q
    ||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||| |||    
T  2058023 ttgacctaaaatcacccctcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggtttttttctttatgatttcatcatc 2057924  T
Q  533 taagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||    
T  2057923 taagtgtggtggtttgttgttcgtcgtcttgcgcggcgttgtttgat 2057877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 381 - 579
Target Start/End: Original strand, 28235427 - 28235625
Alignment:
Q  381 ctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatct 480  Q
    |||||| |||||||||| || || |  || |||| ||||||||||||||||  ||||||| ||||||| | ||||||||||||||| | |||||| ||||    
T  28235427 ctctagattttctcttccagtttctttattgaggggtggttttgggtcaatcattgacctgaaatcacccctcttcatctttttctttctatttcgatct 28235526  T
Q  481 aaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||| |||||||||||  |||||||||||||| ||||||||||    
T  28235527 aaataagtgattttcacatagatctagattttttctttgtgatttcatcatctaagtgtgatggtttgttgtctgtcgtcttgtgcggcgttgtttgat 28235625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 373 - 579
Target Start/End: Complemental strand, 43262063 - 43261858
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    |||||||||||||||||||| ||   |  |||| ||| |||  ||| ||||| ||||||| || |||| ||||||| ||||||||||||||| ||| |||    
T  43262063 ttttctctctctaggttttcactatcaattttttcattgagaggtgattttgagtcaattcttaacctgaaatcacccatcttcatctttttatctctat 43261964  T
Q  473 ttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgtt 572  Q
    |||||||||||||||||||||||||||| ||||||| |||| ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||    
T  43261963 ttcaatctaaataagtgattttcacatagatctagg-ttttcctttgtgattttatcatctaagtgtggtggtttgttgttcgtcgtcttatgcggtgtt 43261865  T
Q  573 gtttgat 579  Q
    |||||||    
T  43261864 gtttgat 43261858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 360 - 564
Target Start/End: Complemental strand, 7887196 - 7886992
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc 459  Q
    |||||| || || |||||||| ||||  |||||||||| || || | |||||||| ||||||||||||| ||| ||||||| ||||||  | ||||| ||    
T  7887196 aagccggccctagttttctctttctaacttttctcttccagtttcttcatcgaggggtggttttgggtccattcttgacctgaaatcatccctcttcgtc 7887097  T
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgt 559  Q
    |||| |||| ||||| ||||||||||||||||||||||||| ||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  7887096 ttttcctctctattttaatctaaataagtgattttcacataaatctatgttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtcgt 7886997  T
Q  560 cttgt 564  Q
    |||||    
T  7886996 cttgt 7886992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 417 - 579
Target Start/End: Original strand, 26578127 - 26578292
Alignment:
Q  417 tggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctagg---ttttt 513  Q
    ||||||| |||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||   |||||    
T  26578127 tggtttttggtcaattcttgacctgaaatcactcatcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggtttttttt 26578226  T
Q  514 tctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||| ||||||| |||||| ||| ||| |||||||||||||||||||||||  ||||||||||    
T  26578227 tctttgtaatttcatcatctaaatgtagtgatttgttgttcgtcgtcttgtgcgacgttgtttgat 26578292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 373 - 579
Target Start/End: Original strand, 34881544 - 34881758
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    ||||||||||| ||||||||||||  || || ||||| |||| |||||| |||||||||| ||||||| |||||||   |||||||||||| |||| |||    
T  34881544 ttttctctctccaggttttctcttacagtttctccattgaggggtggttctgggtcaattcttgacctgaaatcacctctcttcatctttt-ctctctat 34881642  T
Q  473 ttcaatctaaataagtgattttcacatatatctag---------gttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttg 563  Q
    |||||||||||||||||||||||||||| ||||||          |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34881643 ttcaatctaaataagtgattttcacatagatctagtttttttcttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttg 34881742  T
Q  564 tgcggtgttgtttgat 579  Q
    ||||| ||||||||||    
T  34881743 tgcggcgttgtttgat 34881758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 360 - 558
Target Start/End: Original strand, 27751735 - 27751945
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcac-tcatcttcat 458  Q
    |||||| || || ||||| |||| |||||||||||||||  ||||||||| |||| ||||||||||||||||| ||||||| ||||||| || |||||||    
T  27751735 aagccggccctagttttccctctataggttttctcttcttaattttccattgaggggtggttttgggtcaattcttgacctgaaatcacctcctcttcat 27751834  T
Q  459 ctttttct-----------ctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggttt 547  Q
    |||||| |           |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  27751835 cttttttttttctttctttctatatttcaatataaataagtgattttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggttt 27751934  T
Q  548 gttgttcgtcg 558  Q
    |||||||||||    
T  27751935 gttgttcgtcg 27751945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 461 - 579
Target Start/End: Original strand, 30298130 - 30298248
Alignment:
Q  461 ttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtc 560  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  30298130 ttttctctatatttcaatctaaataagtgattttcacatagatctaggttttttctttatgatttcatcatctaagtgtggtggtttgttgttcgtcgtc 30298229  T
Q  561 ttgtgcggtgttgtttgat 579  Q
    |||||||| | ||||||||    
T  30298230 ttgtgcggcgctgtttgat 30298248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 378 - 579
Target Start/End: Complemental strand, 19260051 - 19259850
Alignment:
Q  378 tctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaa 477  Q
    |||||||||||||||||||   | || | | | |||| ||||||||||||||||| ||||||| ||||||| |   |||   ||||||||| ||||||||    
T  19260051 tctctctaggttttctcttacggtttcttcgttgaggggtggttttgggtcaattcttgacctgaaatcaccccaattc---tttttctctctatttcaa 19259955  T
Q  478 tctaaataagtgatttt-cacatatatctaggtttttt--ctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgt 574  Q
    ||||||||||||||||| |||||| ||||| |||||||  || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19259954 tctaaataagtgatttttcacatagatctaagttttttttctctgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgt 19259855  T
Q  575 ttgat 579  Q
    |||||    
T  19259854 ttgat 19259850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 373 - 579
Target Start/End: Original strand, 42579711 - 42579928
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttca---tctttttctcta 469  Q
    ||||||||||||||||||||||||  || || ||||| |||| ||||||||||||||||| ||||| | ||||||| | | ||||   | ||||||| |     
T  42579711 ttttctctctctaggttttctcttacagtttctccattgaggggtggttttgggtcaattattgacatgaaatcaccccttttcattttttttttctttc 42579810  T
Q  470 tatttcaatctaaataagtgattttcacatatatctag--------gttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtct 561  Q
    ||||||||||||||||||||||||||||||| || |||        ||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  42579811 tatttcaatctaaataagtgattttcacatagatttaggtttttttgttttttctttgtgatttcatcatctaagtgtggtgatttgttgttcgtcgtct 42579910  T
Q  562 tgtgcggtgttgtttgat 579  Q
    ||||||  ||||||||||    
T  42579911 tgtgcgacgttgtttgat 42579928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 360 - 579
Target Start/End: Complemental strand, 41184703 - 41184479
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc 459  Q
    |||||| || ||||||||| |||||||||||||||||  || || ||||| ||||  || ||||||||||||||||||| | |||||||   ||||||||    
T  41184703 aagccggccctaattttctttctctaggttttctcttacagtttctccattgagggatgattttgggtcaatttttgacatgaaatcaccattcttcatc 41184604  T
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatctaggtttttt----------ctttgtgatttcataatctaagtgtggtggtttgt 549  Q
    |||| |||| |||||||||||||||||    |||||||||| |||||||||||||          |||||||||||||| ||||||||||||||||||||    
T  41184603 tttt-ctctctatttcaatctaaataa----ttttcacatagatctaggtttttttttgttttttctttgtgatttcatcatctaagtgtggtggtttgt 41184509  T
Q  550 tgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||||||||||||||| ||||||||||    
T  41184508 tgttcgtcgtcttgtgcggcgttgtttgat 41184479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 370 - 579
Target Start/End: Complemental strand, 3271655 - 3271441
Alignment:
Q  370 taattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctcta 469  Q
    ||||||||||||||||  |||| |||| ||| || | ||| |||| ||| |||| |||||||| ||||| | ||||||||| |||||||||||| ||||     
T  3271655 taattttctctctctaaattttttcttatagtttcttcattgagg-gtgattttaggtcaattcttgacatgaaatcactcctcttcatctttt-ctctc 3271558  T
Q  470 tatttcaatctaaataagtgattttcacatatatctag-------gttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtctt 562  Q
    | |||||||||||||||||||||||||||||  ||||        ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  3271557 tgtttcaatctaaataagtgattttcacataggtctaatttttttgttttttctttgtgatttcatcatctaagtgtggtggtttgttattcgtcgtctt 3271458  T
Q  563 gtgcggtgttgtttgat 579  Q
    |||| | ||||||||||    
T  3271457 gtgcagcgttgtttgat 3271441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 378 - 514
Target Start/End: Complemental strand, 20257935 - 20257799
Alignment:
Q  378 tctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaa 477  Q
    |||| ||| ||||||||||||||  ||| |||||||| || ||||| |||||||||||||||| ||||||  ||||| | ||||||||||| ||||||||    
T  20257935 tctccctaagttttctcttctagtgttttcatcgaggggtagtttttggtcaatttttgacctgaaatcatccatctacttctttttctctctatttcaa 20257836  T
Q  478 tctaaataagtgattttcacatatatctaggtttttt 514  Q
    ||||||||||||||||||||||| |||||||||||||    
T  20257835 tctaaataagtgattttcacatagatctaggtttttt 20257799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 421 - 579
Target Start/End: Original strand, 15570791 - 15570950
Alignment:
Q  421 tttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgatttt-cacatatatctaggttttttctttg 519  Q
    |||| |||| |||||||| | ||||||  | |||||||||||||||||||| |||||||||||||  ||||||| |||||| || |||||||||||||||    
T  15570791 tttgagtcagtttttgacttgaaatcatccctcttcatctttttctctataattcaatctaaatatttgatttttcacatagatgtaggttttttctttg 15570890  T
Q  520 tgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||| | | |  ||||||||||| |||||||||||||||| ||||||||||||||||    
T  15570891 tgatttcgtcacccgagtgtggtggtgtgttgttcgtcgtcttatgcggtgttgtttgat 15570950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 452 - 579
Target Start/End: Original strand, 42886392 - 42886518
Alignment:
Q  452 tcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttg 551  Q
    |||||||| |||||||| |||||||||| ||||||||| |||||||||| || ||||||||| ||| |||||||||| |||| ||||||||||| |||||    
T  42886392 tcttcatccttttctctctatttcaatcaaaataagtgcttttcacatagatttaggttttt-cttcgtgatttcatcatctgagtgtggtggtgtgttg 42886490  T
Q  552 ttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||||||||||||| ||||||||||    
T  42886491 ttcgtcgtcttgtgcggcgttgtttgat 42886518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 416 - 579
Target Start/End: Original strand, 11767684 - 11767849
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtga-ttttcacatatatcta-ggttttt 513  Q
    |||||||| |||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||| ||||||| || || || | |||||    
T  11767684 gtggttttaggtcaatttttgacctaaaatcatctgtcttcatctttttctctatatttcaatctaaataagtgatttttcacgtagatatatgtttttt 11767783  T
Q  514 tctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||| ||||| ||   |||| ||||||||||| |||||||||||||||||| ||  ||||||||||    
T  11767784 tcttcgtgatgtcgccatctgagtgtggtggtgtgttgttcgtcgtcttgtacgaagttgtttgat 11767849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 411 - 514
Target Start/End: Original strand, 10649325 - 10649428
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggtt 510  Q
    |||| ||| ||||||||||||| ||||||| ||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  10649325 gaggggtgattttgggtcaattcttgacctgaaatcacccctcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggtt 10649424  T
Q  511 tttt 514  Q
    ||||    
T  10649425 tttt 10649428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 432 - 579
Target Start/End: Complemental strand, 27576537 - 27576389
Alignment:
Q  432 ttttgacctaaaatcac-tcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataa 530  Q
    ||||||||| ||||| | || |||||||| |||||||| ||||||||| |||||||||||| |||||||| |||||| |||||||||||||||||| | |    
T  27576537 ttttgacctgaaatcgcctcttcttcatccttttctctctatttcaatgtaaataagtgatattcacatagatctagattttttctttgtgatttcgtca 27576438  T
Q  531 tctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    | | ||||||||||| |||||||| ||  ||||||||  ||||||||||    
T  27576437 tatgagtgtggtggtatgttgttcttctacttgtgcgacgttgtttgat 27576389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 411 - 526
Target Start/End: Original strand, 6445808 - 6445923
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggtt 510  Q
    |||| ||||||||| |||||||||| || ||||||||| |||||||||| |||||||| ||| | ||| ||||||||||||||| ||||| |||||||||    
T  6445808 gaggggtggttttgagtcaatttttaacttaaaatcacccatcttcatcgttttctctctatcttaatttaaataagtgatttttacatagatctaggtt 6445907  T
Q  511 ttttctttgtgatttc 526  Q
    ||||||| ||||||||    
T  6445908 ttttcttcgtgatttc 6445923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 414 - 579
Target Start/End: Complemental strand, 7613270 - 7613097
Alignment:
Q  414 gtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctt---------tttctctatatttcaatctaaataagtgattttcacatatatc 504  Q
    |||||||||||||||||||||| | || ||||||| ||||||||||||         ||||||| | |||||||||||||||||| |||||| ||| |||    
T  7613270 gtgtggttttgggtcaattttttatctgaaatcacccatcttcatcttcgtcatccttttctctctgtttcaatctaaataagtgtttttcatatagatc 7613171  T
Q  505 taggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||| |||||||  ||||||  | |||| ||||||||||| ||||||||||||||||||||  |||||||||||    
T  7613170 taggt-ttttcttcatgattttgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcaatgttgtttgat 7613097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 420 - 579
Target Start/End: Original strand, 14211082 - 14211240
Alignment:
Q  420 ttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttg 519  Q
    |||| ||||||||||||||||| |||||| | ||| |||||||||| || | ||||||||||||||||||||||||||||| ||| | ||||||  || |    
T  14211082 ttttaggtcaatttttgacctagaatcacccctctgcatctttttccctttctttcaatctaaataagtgattttcacatacatc-aagtttttatttcg 14211180  T
Q  520 tgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||| |  ||| |||| |    | |||||||||||||||||||||| ||||||||||    
T  14211181 tgatttcgtcgtcttagtgcgacattgtgttgttcgtcgtcttgtgcggcgttgtttgat 14211240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 416 - 526
Target Start/End: Original strand, 7036073 - 7036186
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatcttttt--ctc-tatatttcaatctaaataagtgattttcacatatatctaggtttt 512  Q
    |||||||| ||||| |||||||||||||||||||||||| |||||||||  ||| | | |||||||||||||||||| |||||||||||||| |  ||||    
T  7036073 gtggttttaggtcattttttgacctaaaatcactcatctacatcttttttcctcttttctttcaatctaaataagtggttttcacatatatcaatttttt 7036172  T
Q  513 ttctttgtgatttc 526  Q
    |  |||||||||||    
T  7036173 tcttttgtgatttc 7036186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 416 - 579
Target Start/End: Original strand, 28097030 - 28097193
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggtt-tttt 514  Q
    ||||||||| ||||||||||||||| || |||| |||||||||| ||||| ||  |||||||| ||||||||||||||||||||| || |||||| ||||    
T  28097030 gtggttttgtgtcaatttttgacctgaattcacccatcttcatc-ttttcgctcaatttcaatataaataagtgattttcacataaatttaggttatttt 28097128  T
Q  515 ctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||  ||||||| |  | | ||| |  || | ||||| | ||||| |||||||||||||||||||    
T  28097129 cttcatgatttcgttgtatgagtataatgttgtgttggttgtcgttttgtgcggtgttgtttgat 28097193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 511 - 579
Target Start/End: Original strand, 10649619 - 10649684
Alignment:
Q  511 ttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||||||| ||||||||||||   |||||||||||||||||||||||| ||||||||||    
T  10649619 ttttctttgtgatttcatcatctaagtgtgg---tttgttgttcgtcgtcttgtgcggcgttgtttgat 10649684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 442 - 517
Target Start/End: Complemental strand, 35631868 - 35631792
Alignment:
Q  442 aaatcactcatcttca--tctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctt 517  Q
    ||||||| ||||||||  |||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  35631868 aaatcacccatcttcaactctttttc-ctatatttcaatctaaataagtgatttttacatatatctaagttttttctt 35631792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 416 - 564
Target Start/End: Original strand, 11192244 - 11192392
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggtttttt- 514  Q
    ||||||||||||||||||||||||| |||||||  || || |||||||| ||| ||| |||| |||||||||||||||||||  | ||||| |||||||     
T  11192244 gtggttttgggtcaatttttgacctgaaatcacctatattaatctttttgtctctatatcaa-ctaaataagtgattttcacgcagatctaagttttttc 11192342  T
Q  515 ctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgt 564  Q
    ||| |||| ||| |  | | ||||||||| | ||||||| ||||||||||    
T  11192343 cttcgtgagttcgtcgtttgagtgtggtgttgtgttgtttgtcgtcttgt 11192392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 411 - 500
Target Start/End: Complemental strand, 2979560 - 2979469
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatcttttt--ctctatatttcaatctaaataagtgattttcacata 500  Q
    |||| ||| |||| ||||||||||||||||| |||||| | ||| |||||||||  |||| | |||||||||||||||||||||||||||||    
T  2979560 gaggggtgattttaggtcaatttttgacctataatcacccctctgcatcttttttcctctttctttcaatctaaataagtgattttcacata 2979469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 460 - 526
Target Start/End: Original strand, 42432821 - 42432887
Alignment:
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttc 526  Q
    ||||||||| |||||||||||||| |||||| ||||| ||| || ||||||||||||||||||||||    
T  42432821 tttttctctctatttcaatctaaaaaagtgaatttcatatagatttaggttttttctttgtgatttc 42432887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 411 - 500
Target Start/End: Original strand, 39567136 - 39567227
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctc--tatatttcaatctaaataagtgattttcacata 500  Q
    |||| ||| |||| ||||||||||||||||| |||||| | ||| |||||||||| |  | | |||||||||||||||||||||||||||||    
T  39567136 gaggggtgattttaggtcaatttttgacctagaatcacgcctctgcatctttttccccctttctttcaatctaaataagtgattttcacata 39567227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 442 - 561
Target Start/End: Complemental strand, 1697045 - 1696923
Alignment:
Q  442 aaatcactcatcttcat-ctttt-tctctatatttcaatctaaataagtgattttcacatatatctaggtttt-ttctttgtgatttcataatctaagtg 538  Q
    |||||||| |||||||| ||||| ||||  ||||||||||||||||||||||||||||||| |||||  |||| ||||||||||| || |  ||||||||    
T  1697045 aaatcactaatcttcattcttttatctcactatttcaatctaaataagtgattttcacatagatctatattttattctttgtgatctcttcgtctaagtg 1696946  T
Q  539 tggtggtttgttgttcgtcgtct 561  Q
    || ||   |||||||||| ||||    
T  1696945 tgatgtcatgttgttcgttgtct 1696923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 476 - 569
Target Start/End: Original strand, 13421850 - 13421943
Alignment:
Q  476 aatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggt 569  Q
    |||||||||||||| ||||| |||||||  || |||| | ||||||||||  |  |||||||||| || | |||||||||||||||||||||||    
T  13421850 aatctaaataagtggttttcccatatataaagtttttctttttgtgattttttcgtctaagtgtgatgttgtgttgttcgtcgtcttgtgcggt 13421943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 470 - 564
Target Start/End: Complemental strand, 14082556 - 14082456
Alignment:
Q  470 tatttcaatctaaataagtgattttcacatatatctaggtttt------ttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttg 563  Q
    ||||||||||||||||||||  ||||||||||||| || ||||      || |||||||||||||  ||||||||||| | | |||||||||||||||||    
T  14082556 tatttcaatctaaataagtggctttcacatatatcaagtttttcttatattttttgtgatttcatcgtctaagtgtggcgttgtgttgttcgtcgtcttg 14082457  T
Q  564 t 564  Q
    |    
T  14082456 t 14082456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 442 - 579
Target Start/End: Original strand, 3166262 - 3166400
Alignment:
Q  442 aaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggtttttt--ctttgtgatttcataatctaagtgt 539  Q
    ||||||||||||||||||||||| ||| ||||| ||| ||||||||  ||||||||||| |  || |||||||  ||||||||||||   || |||||||    
T  3166262 aaatcactcatcttcatctttttatctttatttaaatataaataagcaattttcacatagacttaagtttttttactttgtgatttcggcatttaagtgt 3166361  T
Q  540 ggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||   | |||| ||||  |||||||||| |||||||||||    
T  3166362 gg-actgtgttattcgctgtcttgtgcgatgttgtttgat 3166400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 468
Target Start/End: Complemental strand, 35676278 - 35676227
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctct 468  Q
    |||||||||| ||||||||| ||||||||||| ||||||||||||||||||||    
T  35676278 gtggttttggatcaatttttaacctaaaatca-tcatcttcatctttttctct 35676227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 452 - 579
Target Start/End: Complemental strand, 1582288 - 1582162
Alignment:
Q  452 tcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttg 551  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || ||||| | |||||||  ||||||||||  | | |||| |  | | ||| |    
T  1582288 tcttcatatttttctctccattttaatctaaataagtgattttcacgtagatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 1582190  T
Q  552 ttcgtcgtcttgtgcggtgttgtttgat 579  Q
    || |||||||||||||| ||||||||||    
T  1582189 tttgtcgtcttgtgcggcgttgtttgat 1582162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 452 - 579
Target Start/End: Original strand, 1602527 - 1602653
Alignment:
Q  452 tcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttg 551  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||| || ||||| | |||||||  ||||||||||  | | |||| |  | | ||| |    
T  1602527 tcttcatatttttctctccattttaatctaaataagtgattttcacgtagatcta-gctttttctacgtgatttcatcgtatgagtgcgacgttgtgtcg 1602625  T
Q  552 ttcgtcgtcttgtgcggtgttgtttgat 579  Q
    || |||||||||||||| ||||||||||    
T  1602626 tttgtcgtcttgtgcggcgttgtttgat 1602653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 411 - 568
Target Start/End: Complemental strand, 6012386 - 6012217
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctc---tatatttcaatctaaataagtgattttcacatatatctag 507  Q
    |||| |||||||| ||||| |||||||| || |||||| | ||| ||||||||| ||   | | |||||||||||||||||| ||||||| | |||| ||    
T  6012386 gaggggtggttttaggtcattttttgacatagaatcacccctctacatctttttttcccttttctttcaatctaaataagtgtttttcacgtctatcaag 6012287  T
Q  508 gtttt---------ttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
     ||||         || |||||||||||||  |||||||| |||| | ||||||||||||||||||||||    
T  6012286 tttttccttttgtgttttttgtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcgg 6012217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 460 - 575
Target Start/End: Complemental strand, 19983516 - 19983398
Alignment:
Q  460 tttttctctatatttcaa-tctaaataagtgattttcacatatatctaggttt--tttctttgtgatttcataatctaagtgtggtggtttgttgttcgt 556  Q
    ||||||| | |||||||| |||||||| |||||||| ||||| || |||| ||  ||||||||||||||| | || | ||||||| | | ||||||||||    
T  19983516 tttttctttctatttcaaatctaaatacgtgattttgacatagatttagggttattttctttgtgatttcgtcatatgagtgtggcgctgtgttgttcgt 19983417  T
Q  557 cgtcttgtgcggtgttgtt 575  Q
    || ||||||||| ||||||    
T  19983416 cgccttgtgcggcgttgtt 19983398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 525
Target Start/End: Complemental strand, 19100818 - 19100734
Alignment:
Q  442 aaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctag-gttttttctttgtgattt 525  Q
    ||||||||||| | ||  ||||||||| ||||||||| |||||||||||||||  |||| || |||  |||||||||||||||||    
T  19100818 aaatcactcatttacacgtttttctctctatttcaatttaaataagtgatttttgcataaatttagatttttttctttgtgattt 19100734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 565
Target Start/End: Complemental strand, 24229969 - 24229866
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatctag--gttt--------tttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtct 561  Q
    |||||||||||||||||||||||||||| |||| ||  ||||        ||| ||||||||||| | ||||||||| || | |||||||||||||||||    
T  24229969 tttcaatctaaataagtgattttcacatctatcaagttgtttcttttgtgtttttttgtgatttcgtcatctaagtgcggcgttttgttgttcgtcgtct 24229870  T
Q  562 tgtg 565  Q
    ||||    
T  24229869 tgtg 24229866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 504
Target Start/End: Original strand, 38597638 - 38597733
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatcttttt-ctctata-tttcaatctaaataagtgattttcacatatatc 504  Q
    |||| |||||||| ||| | ||||||||||| |||||| | ||| ||||||||| | ||||  ||||||| |||||||||||||||||||| ||||    
T  38597638 gaggggtggttttaggttattttttgacctagaatcacccctctacatcttttttccctattctttcaatttaaataagtgattttcacatctatc 38597733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 472 - 518
Target Start/End: Complemental strand, 8096682 - 8096637
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatctaggttttttcttt 518  Q
    |||||||||||||||||| |||||||||||||| | |||||||||||    
T  8096682 tttcaatctaaataagtggttttcacatatatc-aagttttttcttt 8096637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 472 - 518
Target Start/End: Complemental strand, 11977121 - 11977076
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatctaggttttttcttt 518  Q
    |||||||||||||||||| |||||||||||||| | |||||||||||    
T  11977121 tttcaatctaaataagtggttttcacatatatc-aagttttttcttt 11977076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 499
Target Start/End: Complemental strand, 9762685 - 9762640
Alignment:
Q  454 ttcatctttttctctatatttcaatctaaataagtgattttcacat 499  Q
    |||||||||| ||| | |||| ||||||||||||||||||||||||    
T  9762685 ttcatcttttcctccacattttaatctaaataagtgattttcacat 9762640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 465
Target Start/End: Original strand, 33029727 - 33029776
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttc 465  Q
    |||||||||||||||||||||||   ||||||| | ||||||||||||||    
T  33029727 gtggttttgggtcaatttttgactcgaaatcacccgtcttcatctttttc 33029776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 452 - 528
Target Start/End: Complemental strand, 42432244 - 42432170
Alignment:
Q  452 tcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcat 528  Q
    ||||||| ||||||||| | |||||||  ||| |||||||||  | ||| ||||||||||||||||||| |||||||    
T  42432244 tcttcatatttttctctctttttcaattaaaaaaagtgattt--atatagatctaggttttttctttgtaatttcat 42432170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 504
Target Start/End: Original strand, 4771044 - 4771076
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatc 504  Q
    |||||||||||||||||| ||||||||||||||    
T  4771044 tttcaatctaaataagtggttttcacatatatc 4771076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 504
Target Start/End: Original strand, 6216803 - 6216835
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatc 504  Q
    |||||||||||||||||| ||||||||||||||    
T  6216803 tttcaatctaaataagtggttttcacatatatc 6216835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 460 - 504
Target Start/End: Complemental strand, 8088409 - 8088365
Alignment:
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatc 504  Q
    ||||||||| | |||| |||||||||||||||||||||| |||||    
T  8088409 tttttctctttctttcgatctaaataagtgattttcacaaatatc 8088365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 471 - 507
Target Start/End: Original strand, 10148730 - 10148766
Alignment:
Q  471 atttcaatctaaataagtgattttcacatatatctag 507  Q
    |||| ||||||||||||||||||||||||| ||||||    
T  10148730 attttaatctaaataagtgattttcacatagatctag 10148766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 516 - 572
Target Start/End: Complemental strand, 14726592 - 14726536
Alignment:
Q  516 tttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgtt 572  Q
    ||||||||||| |  |||||||| |||| | ||||||||||||||||||||| ||||    
T  14726592 tttgtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcgatgtt 14726536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 504
Target Start/End: Original strand, 15571390 - 15571422
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatc 504  Q
    |||||||||||||||||| ||||||||||||||    
T  15571390 tttcaatctaaataagtggttttcacatatatc 15571422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 419 - 498
Target Start/End: Original strand, 24549276 - 24549356
Alignment:
Q  419 gttttgggtcaatttttg-acctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcaca 498  Q
    ||||||||||| |||||  |||| || | ||||||||||||||||| ||||  ||||||||| ||||||  ||||||||||    
T  24549276 gttttgggtcattttttttacctgaagttactcatcttcatcttttcctctcaatttcaatccaaataaccgattttcaca 24549356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 579
Target Start/End: Complemental strand, 28541013 - 28540981
Alignment:
Q  547 tgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||||||||||| ||||||||||    
T  28541013 tgttgttcgtcgtcttgtgcggcgttgtttgat 28540981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 500
Target Start/End: Complemental strand, 28541097 - 28541069
Alignment:
Q  472 tttcaatctaaataagtgattttcacata 500  Q
    |||||||||||||||||||||||||||||    
T  28541097 tttcaatctaaataagtgattttcacata 28541069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 411 - 467
Target Start/End: Complemental strand, 31392005 - 31391949
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctc 467  Q
    |||| |||||||| ||||| ||||||||||| |||||| | ||| ||||||||||||    
T  31392005 gaggggtggttttaggtcattttttgacctagaatcacccctctacatctttttctc 31391949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 35774702 - 35774754
Alignment:
Q  257 gatgaattagtctcatcagttgcacgtgaaagatatccgatttacaccaaaaa 309  Q
    ||||||||| |||| ||||||||||| | |||||| |||||| ||||||||||    
T  35774702 gatgaattaatctcctcagttgcacgcggaagatacccgattcacaccaaaaa 35774754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 140; Significance: 5e-73; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 378 - 579
Target Start/End: Original strand, 19876058 - 19876256
Alignment:
Q  378 tctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaa 477  Q
    |||||||||||||||||||   ||||||| || |||| ||||||||||||||||| ||||||| |||| ||||||||||||||||||||| |||||||||    
T  19876058 tctctctaggttttctctt---gattttctattgaggggtggttttgggtcaattcttgacctgaaattactcatcttcatctttttctcaatatttcaa 19876154  T
Q  478 tctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttg 577  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||    
T  19876155 tctaaataagtgattttcacatagatcaaggttttttctttgtgatttcatcatctaagtgtagtggtttgttgttcgtcgtcttgtgcggcgttgtttg 19876254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 373 - 579
Target Start/End: Original strand, 11196730 - 11196934
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    |||||||||||||| ||||||||||||| || | | | |||| ||||||||||||||||| ||||||| ||||||  |||||||||||||||||||||      
T  11196730 ttttctctctctagtttttctcttctagtttcttcgttgaggggtggttttgggtcaattcttgacctgaaatcatccatcttcatctttttctctat-- 11196827  T
Q  473 ttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgtt 572  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  11196828 ttcaatctaaataagtgattttcacatagatctaggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 11196927  T
Q  573 gtttgat 579  Q
    |||||||    
T  11196928 gtttgat 11196934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 416 - 579
Target Start/End: Original strand, 35580339 - 35580502
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttc 515  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  35580339 gtggttttgggtcaatttttgacataaaatcactcatcttcatctttttctctctatttcaatttaaataagtgattttcacatagatctaggttttttc 35580438  T
Q  516 tttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    || |||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  35580439 ttcgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacgttgtttgat 35580502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 360 - 579
Target Start/End: Complemental strand, 44100191 - 44099973
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc 459  Q
    |||||| || || ||||||||||||||||||||||||   | || | ||| |||| ||||||||||||| ||| ||||||||||||||| | ||||||||    
T  44100191 aagccggccctagttttctctctctaggttttctctttcggtttcttcattgaggggtggttttgggtcgattcttgacctaaaatcacccctcttcatc 44100092  T
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgt 559  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  44100091 tttttctctatatttcaatctaaataagttattttcacatagatctaagttttttctttgtgattt-atcatctaagtgtggtggtttgttgttcgtcgt 44099993  T
Q  560 cttgtgcggtgttgtttgat 579  Q
    ||||||||| ||||||||||    
T  44099992 cttgtgcggcgttgtttgat 44099973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 378 - 576
Target Start/End: Original strand, 44577879 - 44578078
Alignment:
Q  378 tctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaa 477  Q
    |||||||||||||||||||   | || | ||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  44577879 tctctctaggttttctcttactgtttcttcattgaggggtggttttgggtcaatttttgacctaaaatcactcctcttcatctttttctctctatttcaa 44577978  T
Q  478 tctaaataagtgattttcacatatatctagg-ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgttt 576  Q
    ||||| |||||||||| |||||| ||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  44577979 tctaactaagtgatttacacatagatctaggtttttttctttgtaatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgttt 44578078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 407 - 579
Target Start/End: Original strand, 34611676 - 34611849
Alignment:
Q  407 catcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatcta 506  Q
    |||||||| ||||||||||||||||| ||||||| ||||||||||||||||| ||||||| | ||||||| ||||||||||||||||||||||| |||||    
T  34611676 catcgaggggtggttttgggtcaattcttgacctgaaatcactcatcttcatatttttctttctatttcagtctaaataagtgattttcacataaatcta 34611775  T
Q  507 gg-ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34611776 ggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgat 34611849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 359 - 567
Target Start/End: Original strand, 11725506 - 11725714
Alignment:
Q  359 taagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcat 458  Q
    ||||||| || || |||||||||||||| |||||||||  || || | ||| |||| ||||||||||||||||| ||||||| ||||||| | ||||| |    
T  11725506 taagccggccctagttttctctctctagattttctctttcagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatcacccctcttcgt 11725605  T
Q  459 ctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcg 558  Q
    |||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||    
T  11725606 ctttttctctttatttcaatctaaataagtgtttttcacatagatctaggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcatcg 11725705  T
Q  559 tcttgtgcg 567  Q
    |||||||||    
T  11725706 tcttgtgcg 11725714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 359 - 577
Target Start/End: Original strand, 33895906 - 33896125
Alignment:
Q  359 taagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcat 458  Q
    ||||||| || ||||||||||||||||||||||||||||  | || | ||| | || ||||||||||||||||| |||| ||||| |||| | |||||||    
T  33895906 taagccggccctaattttctctctctaggttttctcttcgcgtttcttcattgggg-gtggttttgggtcaattcttgatctaaagtcacccctcttcat 33896004  T
Q  459 ctttttctctatatttcaatctaaataagtgattttcacatatatctagg--ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgt 556  Q
    |||||||||| ||||| ||||||||||||||| ||||||||| |||||||  |||||||||||||||||||| |||||||||||||||||||||||||||    
T  33896005 ctttttctctctatttaaatctaaataagtgactttcacatagatctaggttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgt 33896104  T
Q  557 cgtcttgtgcggtgttgtttg 577  Q
    | |||||||||| ||||||||    
T  33896105 cttcttgtgcggcgttgtttg 33896125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 363 - 577
Target Start/End: Original strand, 9072545 - 9072761
Alignment:
Q  363 ccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatcttt 462  Q
    |||||| ||||||||||||||||| ||||||| ||| | || | ||| | || ||||||||||||||||||||||| | ||||||| | |||||||||||    
T  9072545 ccgaccctaattttctctctctagattttctcatctcgtttcttcattggggggtggttttgggtcaatttttgacttgaaatcacccctcttcatcttt 9072644  T
Q  463 ttctctatatttcaatctaaataagtgattttcacatatatctag--gttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtc 560  Q
    |||||| ||||||||| ||||||||||| ||||||||| ||||||   |||||||||||||||||||| ||||||||||||||||||||||||| || ||    
T  9072645 ttctctctatttcaatttaaataagtgactttcacataaatctagattttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcttcatc 9072744  T
Q  561 ttgtgcggtgttgtttg 577  Q
    |||||||| ||||||||    
T  9072745 ttgtgcggcgttgtttg 9072761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 373 - 579
Target Start/End: Complemental strand, 42448274 - 42448066
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    ||||||||||||||||||| ||||  || |||  ||| |||| |||||||||||| |||| ||||||| ||||||| | ||||||||||||||||| |||    
T  42448274 ttttctctctctaggttttgtcttacagttttgtcattgaggggtggttttgggttaattcttgacctgaaatcacccctcttcatctttttctctctat 42448175  T
Q  473 ttcaatctaaataagtgattttcacatatatctaggttt--tttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtg 570  Q
    ||||||||||||||||||||| || ||| ||||||||||  ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||      
T  42448174 ttcaatctaaataagtgatttacatatagatctaggttttgtttctttgtgatttcatcatctaagtgtggaggtttgttgttcgtcgtcttgtgcggca 42448075  T
Q  571 ttgtttgat 579  Q
    |||||||||    
T  42448074 ttgtttgat 42448066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 359 - 579
Target Start/End: Complemental strand, 14907184 - 14906962
Alignment:
Q  359 taagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcat 458  Q
    |||||||||| || ||||||||||||||||||||||||  |  || | ||| ||||  || |||||| |||||| ||||||| ||||||| |||||||||    
T  14907184 taagccgaccctagttttctctctctaggttttctcttacaatttcttcattgagggatgattttggatcaattcttgacctgaaatcacccatcttcat 14907085  T
Q  459 ctttttctctatatttcaatctaaataagtgattttcacatatatctaggt--tttttctttgtgatttcataatctaagtgtggtggtttgttgttcgt 556  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||  ||||||||||| ||||||| ||| || ||||||| ||||||||| ||    
T  14907084 ctttttctctttatttcaatctaaataagtgattttcacatagatctaggttctttttctttgtaatttcatcatcaaaatgtggtgatttgttgtttgt 14906985  T
Q  557 cgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||| ||||||||||    
T  14906984 cgtcttgtgcggcgttgtttgat 14906962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 416 - 579
Target Start/End: Original strand, 2655750 - 2655915
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctag--gttttt 513  Q
    ||||||||||||||||| |||||||  |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||   |||||    
T  2655750 gtggttttgggtcaattcttgacctgcaatcacccatcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctagattttttt 2655849  T
Q  514 tctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||| ||||||| |||||||||||||| |||||||||||||||||||||| | ||||||||||    
T  2655850 tctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcagcgttgtttgat 2655915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 373 - 579
Target Start/End: Complemental strand, 9619604 - 9619396
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    |||||||||||||| |||||||||  |  || | ||| |||| ||||||||||||||||| ||||||| ||||||| | ||||||||||||||||| |||    
T  9619604 ttttctctctctagattttctcttacaatttcttcattgaggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctctttat 9619505  T
Q  473 ttcaatctaaataagtgattttcacatatatctag--gttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtg 570  Q
    |||||||||||||||||||||||||||| || |||   ||||||| |||| ||||||| ||||| |||||||| |||||||||||||||||||||||| |    
T  9619504 ttcaatctaaataagtgattttcacatagatttagattttttttcattgtaatttcatcatctacgtgtggtgatttgttgttcgtcgtcttgtgcggcg 9619405  T
Q  571 ttgtttgat 579  Q
    |||||||||    
T  9619404 ttgtttgat 9619396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 411 - 579
Target Start/End: Original strand, 4808840 - 4809009
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctag-gt 509  Q
    |||| ||||||||||||||||| ||||||| |||| || | ||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||||||  |    
T  4808840 gaggggtggttttgggtcaattcttgacctgaaattacccctcttcatctttttttctttatttcaatgtaaataagtgattttcacatagatctagctt 4808939  T
Q  510 tttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  4808940 tttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgat 4809009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 373 - 579
Target Start/End: Complemental strand, 9498847 - 9498638
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    ||||||||||||||||||||||||  |  || | ||| |||| ||||||||||||||||| || |||| ||||||| | ||||||||||||| ||| |||    
T  9498847 ttttctctctctaggttttctcttacaatttcttcattgaggggtggttttgggtcaattctt-acctgaaatcacccctcttcatctttttatctttat 9498749  T
Q  473 ttcaatctaaataagtgattttcacatatatctagg----ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
    |||||||||||||||||||||||||||| || ||||    |||||||||||| ||||||| |||||||||||||| |||||||||||| |||||||||||    
T  9498748 ttcaatctaaataagtgattttcacatagatttaggttttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgttgtcttgtgcgg 9498649  T
Q  569 tgttgtttgat 579  Q
      |||||||||    
T  9498648 ctttgtttgat 9498638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 373 - 567
Target Start/End: Complemental strand, 43890371 - 43890175
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    ||||||||||||||||||||||||  |  || | ||| |||| |||||||||| ||| |||||||||| ||||||| | ||||||||||||||||| ||     
T  43890371 ttttctctctctaggttttctcttacaatttcttcattgaggggtggttttggatcattttttgacctgaaatcacccctcttcatctttttctctttaa 43890272  T
Q  473 ttcaatctaaataagtgattttcacatatatctag--gttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcg 567  Q
    |||||||||||||||||||||| ||||| ||||||   |||||||||||| ||||||| |||||||| ||||| |||||||||||||||||||||||    
T  43890271 ttcaatctaaataagtgattttgacatagatctagattttttttctttgtaatttcatcatctaagtatggtgatttgttgttcgtcgtcttgtgcg 43890175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 364 - 584
Target Start/End: Complemental strand, 32724745 - 32724515
Alignment:
Q  364 cgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtg-tggttttgggtcaattt-ttgacctaaaatcactcatcttcatctt 461  Q
    ||||| || |||||||||||| |||||||||||  || || ||||| |||| | |||||||||||||| || ||||||| ||||||||  ||||||||||    
T  32724745 cgaccctagttttctctctctgggttttctcttacagtttctccattgagggggtggttttgggtcaaattattgacctgaaatcacttctcttcatctt 32724646  T
Q  462 tttctctatatttcaatctaaataagtgattttcacatatatctag---------gttttttctttgtgatttcataatctaagtgtggtggtttgttgt 552  Q
    || |||| ||||||||||||||||||||||||||||||| ||||||         ||||||||||| ||||||||| |||||| ||||||||||||||||    
T  32724645 tt-ctctctatttcaatctaaataagtgattttcacatagatctagattttttttgttttttctttatgatttcatcatctaactgtggtggtttgttgt 32724547  T
Q  553 tcgtcgtcttgtgcggtgttgtttgatgtcca 584  Q
    |||||||||||||||| |||||||||| ||||    
T  32724546 tcgtcgtcttgtgcggcgttgtttgatttcca 32724515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 378 - 579
Target Start/End: Original strand, 33342280 - 33342482
Alignment:
Q  378 tctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaa 477  Q
    |||||||||||||| ||||| || || | ||| |||| |||||||||||||||||||| |||| ||||||| | |||||||| |||| ||| || |||||    
T  33342280 tctctctaggttttttcttcgagtttcttcattgaggggtggttttgggtcaatttttaacctgaaatcacccctcttcatccttttttctctaattcaa 33342379  T
Q  478 tctaaataagtga-ttttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgttt 576  Q
    ||||||||||||| |||||||||| |||||||||||||||| |||||||| | | | |||||||||||| |||||||| ||||||| ||||| ||| |||    
T  33342380 tctaaataagtgatttttcacatagatctaggttttttcttcgtgatttcgtcacccaagtgtggtggtgtgttgttcttcgtcttatgcggcgtttttt 33342479  T
Q  577 gat 579  Q
    |||    
T  33342480 gat 33342482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 461 - 579
Target Start/End: Complemental strand, 43192503 - 43192385
Alignment:
Q  461 ttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtc 560  Q
    |||||||| |||||||||||||||||||| |||| ||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  43192503 ttttctctctatttcaatctaaataagtggtttttacatagatctaggttttttcttcgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtc 43192404  T
Q  561 ttgtgcggtgttgtttgat 579  Q
    |||||||| ||||||||||    
T  43192403 ttgtgcggcgttgtttgat 43192385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 378 - 579
Target Start/End: Original strand, 28239675 - 28239878
Alignment:
Q  378 tctctctaggttttctcttctagattttccatcgaggtg-tggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttca 476  Q
    |||||||||||||||||||| |  || | ||| |||| | || ||||||||||||||||||||| |||||||   ||||||||||||||||| |||||||    
T  28239675 tctctctaggttttctcttccattttcttcattgagggggtgattttgggtcaatttttgacctgaaatcacctctcttcatctttttctctctatttca 28239774  T
Q  477 atctaaataagtg-attttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtt 575  Q
    |||||||||||||  |||||||||| ||||||||||| |||  | |||||| | || | ||||||| |||||||||||||||||||||||||| ||||||    
T  28239775 atctaaataagtgttttttcacatagatctaggttttctctacgcgatttcgtcatttgagtgtggcggtttgttgttcgtcgtcttgtgcggcgttgtt 28239874  T
Q  576 tgat 579  Q
    ||||    
T  28239875 tgat 28239878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 361 - 552
Target Start/End: Original strand, 17949073 - 17949265
Alignment:
Q  361 agccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatct 460  Q
    |||||||| || ||||||||||||||||| ||||||  || || | ||| || | ||| ||||||||||||| ||||||| ||||||| | |||||| ||    
T  17949073 agccgaccatagttttctctctctaggttgtctcttacagtttcttcattgatgggtgattttgggtcaattattgacctgaaatcacccctcttcacct 17949172  T
Q  461 ttttctctatatttcaatctaaataagtgattttcacatatatctag-gttttttctttgtgatttcataatctaagtgtggtggtttgttgt 552  Q
    |||||||| |||||||||||||||||| |||||||||||| |||| |  |||||| ||||||||||||| ||||||||||| |||||||||||    
T  17949173 ttttctctctatttcaatctaaataagcgattttcacatagatcttgatttttttatttgtgatttcatcatctaagtgtgatggtttgttgt 17949265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 416 - 579
Target Start/End: Original strand, 11464053 - 11464216
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggtttt--t 513  Q
    |||||||| |||||||| ||||||| ||||||| | |||||||  | |||||| ||||||||| | ||||||||||||||||||| |||||| ||||  |    
T  11464053 gtggttttaggtcaattcttgacctgaaatcacccctcttcat--tcttctctttatttcaatttgaataagtgattttcacatagatctagattttttt 11464150  T
Q  514 tctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||| ||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  11464151 tctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgat 11464216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 370 - 567
Target Start/End: Original strand, 29777064 - 29777252
Alignment:
Q  370 taattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctcta 469  Q
    ||||||||||||||||||||||||| ||  | || | ||| |  | ||||||||||||||||| ||||| | ||||||||| |||||||||||||||||     
T  29777064 taattttctctctctaggttttctcatcctgtttcttcattggtgagtggttttgggtcaattattgacatgaaatcactcctcttcatctttttctctc 29777163  T
Q  470 tatttcaatctaaataagtgattttcacatatatctaggtttt-ttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcg 567  Q
    |||||||||||||||||| ||           ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29777164 tatttcaatctaaataagcgag----------atctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcg 29777252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 420 - 579
Target Start/End: Complemental strand, 37566079 - 37565918
Alignment:
Q  420 ttttgggtcaatttttgacctaaaatcactcatcttcatctttttc-tctatatttcaatctaaataagtgattttcacatatatctaggtttttt-ctt 517  Q
    ||||||||||||| |||| || ||||||| | ||||||| |||||  ||| ||||||||||||||||| ||||||||||||| || |||||||||| |||    
T  37566079 ttttgggtcaattattgatctgaaatcacccttcttcattttttttatctctatttcaatctaaataattgattttcacatagatttaggtttttttctt 37565980  T
Q  518 tgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    || |||||||| ||||||||||||||||||||| |||||||||||||||||  |||||||||    
T  37565979 tgagatttcatcatctaagtgtggtggtttgttattcgtcgtcttgtgcggcattgtttgat 37565918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 373 - 565
Target Start/End: Complemental strand, 15597413 - 15597220
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctc-tata 471  Q
    |||| ||||| |||||||||||||| ||  |||  || |||| ||||||||  ||||||||||||||| ||||||| | |||||||||||||||  |  |    
T  15597413 ttttttctctataggttttctcttccagtatttttattgaggggtggttttcagtcaatttttgacctgaaatcacccctcttcatctttttctagtcca 15597314  T
Q  472 tttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtg 565  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||  ||||||| | |||  ||||| ||||| ||||||| |||||||||||    
T  15597313 tttcaatctaaataagtgattttcacatagatctaggttttttcttcatgatttcgtcatccgagtgtagtggtgtgttgtttgtcgtcttgtg 15597220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 373 - 567
Target Start/End: Complemental strand, 27747358 - 27747164
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatat 472  Q
    |||| |||||||||||||||||||| |  || | |||  ||| || |||||||||||||||||||| | |||||||   ||||||||||||| |||  ||    
T  27747358 ttttttctctctaggttttctcttccaacttcttcattaaggggtagttttgggtcaatttttgacttgaaatcaccattcttcatctttttatctccat 27747259  T
Q  473 ttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcg 567  Q
    |||||| ||||||||| ||||||||||| || || |||||||||| |||||||||  ||||  |||||||||| ||||||||||| |||||||||    
T  27747258 ttcaatttaaataagtaattttcacataaatataagttttttcttcgtgatttcaccatctgggtgtggtggtgtgttgttcgtcatcttgtgcg 27747164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 427 - 566
Target Start/End: Original strand, 16794185 - 16794324
Alignment:
Q  427 tcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtga-ttttcacatatatctaggttttttctttgtgattt 525  Q
    |||||||||||| | ||||||| ||||||||||||||||||| || |||||||||||||||||| |||||||||| ||||||| |||||||| |||||||    
T  16794185 tcaatttttgacttgaaatcacccatcttcatctttttctctctaattcaatctaaataagtgatttttcacataaatctagg-tttttcttcgtgattt 16794283  T
Q  526 cataatctaagtgtggtggtttgttgttcgtcgtcttgtgc 566  Q
    ||| |||  || |||||| | ||||||||||||||||||||    
T  16794284 catcatccgagagtggtgttatgttgttcgtcgtcttgtgc 16794324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 378 - 579
Target Start/End: Original strand, 33298696 - 33298900
Alignment:
Q  378 tctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttct----ctatatt 473  Q
    |||||||| ||||||||||| || || | |||  ||||||||||||| || | ||||||| || ||| |||  |||||||||||||| |    || || |    
T  33298696 tctctctaagttttctcttccagcttcttcattaaggtgtggttttgagtta-tttttgagctgaaaacacctatcttcatctttttatttttctctaat 33298794  T
Q  474 tcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttg 573  Q
    ||||||||||||||||||||||||||| |||||||||||  |||||||||||| | ||| |||| | ||||| |||||||| |||||||||| |||||||    
T  33298795 tcaatctaaataagtgattttcacatagatctaggttttacctttgtgatttcgtcatccaagtctagtggtgtgttgttcatcgtcttgtgtggtgttg 33298894  T
Q  574 tttgat 579  Q
    ||||||    
T  33298895 tttgat 33298900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 373 - 579
Target Start/End: Original strand, 15046730 - 15046939
Alignment:
Q  373 ttttctctctctaggttttctcttctagattttccatcgaggtgtggttttggg-tcaatttttgacctaaaatcactcatcttcatctttttctc-tat 470  Q
    |||| ||||| ||| |||||||||| || || | ||| |||| ||| ||||||| |||||||||||  | |||||||   |||||||||||||||  |      
T  15046730 ttttttctctttagattttctcttcaagtttcttcattgaggggtgattttggggtcaatttttgatatgaaatcacctctcttcatctttttctagtcc 15046829  T
Q  471 atttcaatctaaataagtgattttcacatatatctaggtttttt-ctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggt 569  Q
    ||||||||  || ||||||||||||||||| ||||||||||||| ||| |||||||| | |||  ||||||||||| |||||||||||||||||||||||    
T  15046830 atttcaattcaagtaagtgattttcacatagatctaggtttttttcttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgtgcggt 15046929  T
Q  570 gttgtttgat 579  Q
    | ||||||||    
T  15046930 gctgtttgat 15046939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 431 - 579
Target Start/End: Original strand, 36532794 - 36532942
Alignment:
Q  431 tttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataa 530  Q
    ||||| ||| |||||||  |||||| || ||||| ||| ||||||||| ||||||||   ||||||||||||| ||||||||||||| | | ||| ||      
T  36532794 ttttttacccaaaatcatccatcttaatttttttatctctatttcaatttaaataaggagttttcacatatatttaggttttttcttcgaggttttatcg 36532893  T
Q  531 tctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||| |||||||| | |||||||||||||||||||||||||||||||||    
T  36532894 tctaggtgtggtgttgtgttgttcgtcgtcttgtgcggtgttgtttgat 36532942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 428 - 565
Target Start/End: Complemental strand, 39153336 - 39153195
Alignment:
Q  428 caatttttgacctaaaatcactcatcttcatctttttctc-tatatttcaatctaaataagtgattttcacatatatctaggt----tttttctttgtga 522  Q
    |||||||||||| ||| |||||||||||||||||| |||  |  |||||||| ||||||||||||||||||||| || |||||    |||||||| ||||    
T  39153336 caatttttgaccgaaa-tcactcatcttcatctttgtctagtcaatttcaatttaaataagtgattttcacatagatttaggtattttttttcttcgtga 39153238  T
Q  523 tttcataatctaagtgtggtggtttgttgttcgtcgtcttgtg 565  Q
    |||| | |||  ||||||||||| |||||||||||||||||||    
T  39153237 tttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgtg 39153195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 407 - 568
Target Start/End: Original strand, 37971131 - 37971295
Alignment:
Q  407 catcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatcttttt---ctctatatttcaatctaaataagtgattttcacatatat 503  Q
    |||||||| |||||||| ||||| ||||||||||| |||||| | ||| |||||||||   |  | | |||||||||||||||||||||||||||| ||     
T  37971131 catcgaggagtggttttaggtcattttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtgattttcacatctac 37971230  T
Q  504 ctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
    | || | ||   ||||||||||| |  |||||||| || | ||||||||||||||||||||||||    
T  37971231 caagttgttccttttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcgg 37971295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 420 - 499
Target Start/End: Complemental strand, 18890942 - 18890861
Alignment:
Q  420 ttttgggtcaatttttgacctaaaatcactcatcttcatcttttt--ctctatatttcaatctaaataagtgattttcacat 499  Q
    |||| ||||||||||||||||| |||||||||||| |||||||||  | || | ||||||||||||||||||||||||||||    
T  18890942 ttttaggtcaatttttgacctagaatcactcatctgcatcttttttcccctttctttcaatctaaataagtgattttcacat 18890861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 411 - 526
Target Start/End: Complemental strand, 31013817 - 31013700
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctc---tatatttcaatctaaataagtgattttcacatatatctag 507  Q
    |||| |||||||| ||||| ||||||||||| |||||| | ||| |||||||||| |   | | |||||||||||||||||| ||||||||| ||||||     
T  31013817 gaggggtggttttaggtcattttttgacctagaatcacccctctacatctttttcccccttttctttcaatctaaataagtggttttcacatctatcta- 31013719  T
Q  508 gttttttctttgtgatttc 526  Q
    ||||||| |||||||||||    
T  31013718 gttttttttttgtgatttc 31013700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 407 - 489
Target Start/End: Original strand, 12173375 - 12173455
Alignment:
Q  407 catcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtg 489  Q
    |||||||| ||||||||||||||| ||||||||| ||||||| |||||| |||||||| ||| |||||||||| |||||||||    
T  12173375 catcgagg-gtggttttgggtcaacttttgacctgaaatcacccatctttatcttttt-tctctatttcaatcaaaataagtg 12173455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 407 - 489
Target Start/End: Original strand, 12417803 - 12417883
Alignment:
Q  407 catcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtg 489  Q
    |||||||| ||||||||||||||| ||||||||| ||||||| |||||| |||||||| ||| |||||||||| |||||||||    
T  12417803 catcgagg-gtggttttgggtcaacttttgacctgaaatcacccatctttatcttttt-tctctatttcaatcaaaataagtg 12417883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 450 - 517
Target Start/End: Complemental strand, 17427387 - 17427320
Alignment:
Q  450 catcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctt 517  Q
    |||| |||||||||||||| ||||||| | |||||||||| |||||| ||| ||||||||||||||||    
T  17427387 catcatcatctttttctctctatttcagtgtaaataagtgcttttcaaatagatctaggttttttctt 17427320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 450 - 517
Target Start/End: Complemental strand, 17431037 - 17430970
Alignment:
Q  450 catcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctt 517  Q
    |||| |||||||| ||||| ||| |||||||||||||||| |||||| ||| ||||||||||||||||    
T  17431037 catcatcatctttctctctctatgtcaatctaaataagtgcttttcagatagatctaggttttttctt 17430970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 420 - 499
Target Start/End: Original strand, 41896366 - 41896444
Alignment:
Q  420 ttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacat 499  Q
    |||| ||||||||||||||||| |||||| ||| | ||| |||||| || | ||||||||||||||||||||||||||||    
T  41896366 ttttaggtcaatttttgacctagaatcacccatttgcat-tttttccctttctttcaatctaaataagtgattttcacat 41896444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 416 - 513
Target Start/End: Original strand, 12184169 - 12184263
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttt 513  Q
    ||||||||||||||| ||||||||  |||||||||   || ||||||||||||||  ||||||||||||||||| ||||||||||  ||||| |||||    
T  12184169 gtggttttgggtcaacttttgacccgaaatcactctaatt-atctttttctctat--ttcaatctaaataagtgtttttcacatagctctagtttttt 12184263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 416 - 513
Target Start/End: Original strand, 12428597 - 12428691
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttt 513  Q
    ||||||||||||||| ||||||||  |||||||||   || ||||||||||||||  ||||||||||||||||| ||||||||||  ||||| |||||    
T  12428597 gtggttttgggtcaacttttgacccgaaatcactctaatt-atctttttctctat--ttcaatctaaataagtgtttttcacatagctctagtttttt 12428691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 427 - 500
Target Start/End: Complemental strand, 24853630 - 24853557
Alignment:
Q  427 tcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacata 500  Q
    |||||| ||||||  ||||||||||||||| ||||||||| | ||||| ||| |||||||||||||| ||||||    
T  24853630 tcaattattgacccgaaatcactcatcttcgtctttttctttctattttaatgtaaataagtgatttgcacata 24853557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 419 - 568
Target Start/End: Original strand, 23230494 - 23230655
Alignment:
Q  419 gttttgggtcaatttttgacctaaaatcactcatcttcatcttttt----ctctatatttcaatctaaataagtgattttcacatatatctaggttttt- 513  Q
    ||||| ||||||||||||||| |||||||| | ||| |||||||||    || | | |||||||||||||||||| |||||| || |||| || |||||     
T  23230494 gttttaggtcaatttttgaccaaaaatcacccctctacatcttttttcccctttttctttcaatctaaataagtggttttcatatctatcaagttttttc 23230593  T
Q  514 -------tctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
           | ||||||||||| |  |||||||| || | ||||||||||||||||||||||||    
T  23230594 ttttgtgtttttgtgatttcgtcgtctaagtgcggcgatttgttgttcgtcgtcttgtgcgg 23230655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 521 - 579
Target Start/End: Original strand, 5333391 - 5333449
Alignment:
Q  521 gatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||| | |||| |||| |||| | |||||||||||||||||||||||||||||||||    
T  5333391 gatttcgtcatctgagtgcggtgttgtgttgttcgtcgtcttgtgcggtgttgtttgat 5333449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 509 - 579
Target Start/End: Complemental strand, 8443650 - 8443580
Alignment:
Q  509 ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||| ||| ||||||| |  |||||||| |||| | |||||||||||||||||||||| ||||||||||    
T  8443650 ttttttttttatgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgat 8443580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 504
Target Start/End: Complemental strand, 14545144 - 14545052
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactca-tcttcatctttttctctatatt---tcaatctaaataagtgattttcacatatatc 504  Q
    |||||||| ||||| |||||||||||||||||| |  ||| ||||||||| ||| | ||   |||||||||||||||| ||||||||||||||    
T  14545144 gtggttttaggtcattttttgacctaaaatcaccctctctacatctttttttctcttttctttcaatctaaataagtggttttcacatatatc 14545052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 454 - 515
Target Start/End: Complemental strand, 25241767 - 25241706
Alignment:
Q  454 ttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttc 515  Q
    ||||||||||||| | ||||||||||| ||||||||||| ||||||| || ||| |||||||    
T  25241767 ttcatctttttctttctatttcaatctcaataagtgattgtcacataaatttagattttttc 25241706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 472 - 513
Target Start/End: Complemental strand, 26469379 - 26469338
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatctaggttttt 513  Q
    ||||||||||||||||||||||||||||||||| || |||||    
T  26469379 tttcaatctaaataagtgattttcacatatatcaagtttttt 26469338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 568
Target Start/End: Complemental strand, 7883422 - 7883318
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatctaggtttt--------ttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttg 563  Q
    |||||||||||||||||| ||||||||| |||| || ||||        || ||||||||||| | ||||||||| || | | |||||||||||||||||    
T  7883422 tttcaatctaaataagtggttttcacatctatcaagtttttcttttgtgttttttgtgatttcgtcatctaagtgcggcgttgtgttgttcgtcgtcttg 7883323  T
Q  564 tgcgg 568  Q
    |||||    
T  7883322 tgcgg 7883318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 474 - 521
Target Start/End: Complemental strand, 40619253 - 40619206
Alignment:
Q  474 tcaatctaaataagtgattttcacatatatctaggttttttctttgtg 521  Q
    ||||||||||||||||||||||||||||||| || |||| | ||||||    
T  40619253 tcaatctaaataagtgattttcacatatatcaagtttttctttttgtg 40619206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 452 - 494
Target Start/End: Original strand, 18733938 - 18733980
Alignment:
Q  452 tcttcatctttttctctatatttcaatctaaataagtgatttt 494  Q
    ||||||||||||||||| ||||||||| ||||||| |||||||    
T  18733938 tcttcatctttttctctctatttcaatttaaataattgatttt 18733980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 431 - 520
Target Start/End: Complemental strand, 33214856 - 33214767
Alignment:
Q  431 tttttgacctaaaatcactcatcttcatctttttctctata-tttcaatctaaataagtgattttcacatatatctaggttttttctttgt 520  Q
    |||||||| || ||||| |||||| |||||||||| || |  ||||||| |||||||||||||||| ||||||| || ||||||| |||||    
T  33214856 tttttgacttagaatcattcatctacatctttttcccttttctttcaatttaaataagtgattttcgcatatat-taagttttttttttgt 33214767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 513
Target Start/End: Complemental strand, 37663301 - 37663215
Alignment:
Q  431 tttttgacctaaaatcactcatcttcatctttt----tctctatatttcaatctaaataagtgattttcacatatatctaggttttt 513  Q
    |||||||| || |||||||||||| ||||||||    ||||| |||||| || |||||||||| |||| ||||||||| || |||||    
T  37663301 tttttgacatagaatcactcatctccatctttttttatctctttatttcgatgtaaataagtggtttttacatatatcaagtttttt 37663215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 504
Target Start/End: Original strand, 3240283 - 3240315
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatc 504  Q
    |||||||||||||||||||||| ||||||||||    
T  3240283 tttcaatctaaataagtgatttccacatatatc 3240315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 516 - 572
Target Start/End: Original strand, 3673401 - 3673457
Alignment:
Q  516 tttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgtt 572  Q
    ||||||||||| |  |||||||| |||| | |||||||||||||||| |||||||||    
T  3673401 tttgtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttatgcggtgtt 3673457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 512
Target Start/End: Complemental strand, 8443703 - 8443663
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatctaggtttt 512  Q
    |||| ||||||||||||||||| |||||||||| |||||||    
T  8443703 tttcgatctaaataagtgatttccacatatatccaggtttt 8443663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 500
Target Start/End: Original strand, 14585606 - 14585634
Alignment:
Q  472 tttcaatctaaataagtgattttcacata 500  Q
    |||||||||||||||||||||||||||||    
T  14585606 tttcaatctaaataagtgattttcacata 14585634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 504
Target Start/End: Complemental strand, 20559928 - 20559896
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatc 504  Q
    |||||||||||||||||||||||||||| ||||    
T  20559928 tttcaatctaaataagtgattttcacatctatc 20559896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 504
Target Start/End: Complemental strand, 20571490 - 20571458
Alignment:
Q  472 tttcaatctaaataagtgattttcacatatatc 504  Q
    |||||||||||||||||||||||||||| ||||    
T  20571490 tttcaatctaaataagtgattttcacatctatc 20571458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 470 - 526
Target Start/End: Complemental strand, 39646365 - 39646309
Alignment:
Q  470 tatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttc 526  Q
    ||||||||| ||||||||| ||||| ||||||||| || || ||| |||||||||||    
T  39646365 tatttcaatttaaataagtaattttaacatatatcaagtttatttttttgtgatttc 39646309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 109; Significance: 2e-54; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 416 - 579
Target Start/End: Complemental strand, 16525 - 16359
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctagg---tttt 512  Q
    |||||| | |||||||| |||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||| || ||||   ||||    
T  16525 gtggttctaggtcaattcttgacctaaaatcattcatcttcatctgtttctctctatttcaatctaaataagtgattttcacatagatttaggttttttt 16426  T
Q  513 ttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  16425 ttctttgtgatttcatcatctaagtgtggtggtttgttgtttgtcgtcttgtgcggcgttgtttgat 16359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 100; Significance: 4e-49; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 378 - 553
Target Start/End: Original strand, 8556 - 8731
Alignment:
Q  378 tctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaa 477  Q
    |||||| ||||||||||||| || || | ||| |||| |||||||||||| |||| || || | ||||||| | | ||||||||||| ||| ||||||||    
T  8556 tctctccaggttttctcttccagtttcttcattgaggggtggttttgggttaattcttaacttgaaatcaccccttttcatctttttatctctatttcaa 8655  T
Q  478 tctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgtt 553  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8656 tctaaataagtgattttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgtt 8731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 416 - 577
Target Start/End: Original strand, 5272 - 5434
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataagtgattttcacatatatcta-ggtttttt 514  Q
    ||||||||||||||||| ||||||| ||||||| | ||||||||||| ||||| || |||||||||||||||||| ||| ||||||||||| | ||||||    
T  5272 gtggttttgggtcaattcttgacctgaaatcacccctcttcatctttctctctctacttcaatctaaataagtgacttttacatatatctatgttttttt 5371  T
Q  515 ctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttg 577  Q
    |||||||||||||| || |||||||| ||||||||||||||||||||||||||| ||||||||    
T  5372 ctttgtgatttcatcatttaagtgtgatggtttgttgttcgtcgtcttgtgcggcgttgtttg 5434  T

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Target: scaffold0003 (Bit Score: 98; Significance: 6e-48; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 360 - 579
Target Start/End: Complemental strand, 362053 - 361838
Alignment:
Q  360 aagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatc 459  Q
    |||||| || || |||||||||| |||||||||||||  || || | ||| |||| ||||||||| ||||||| ||||||| ||||||| | ||| ||||    
T  362053 aagccggccttagttttctctctttaggttttctcttacagtttcttcattgaggggtggttttgagtcaattcttgacctgaaatcacccctctccatc 361954  T
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgt 559  Q
    |||||||||||  |||||||||||||||| ||||||||||| |  ||||||||||  |||||||||||| || ||||| |||||||||||||||||||||    
T  361953 tttttctctat--ttcaatctaaataagtaattttcacatagagttaggtttttt--ttgtgatttcatcatttaagtatggtggtttgttgttcgtcgt 361858  T
Q  560 cttgtgcggtgttgtttgat 579  Q
    ||||||||| ||||||||||    
T  361857 cttgtgcggcgttgtttgat 361838  T

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Target: scaffold0014 (Bit Score: 96; Significance: 9e-47; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 456 - 579
Target Start/End: Complemental strand, 201534 - 201411
Alignment:
Q  456 catctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcg 555  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||| ||||||||||||||    
T  201534 catctttttctctatatttcaatctaaataagtgattttcacatagatctagattttttctttgtgatttcatcatctaagtgtgatggtttgttgttcg 201435  T
Q  556 tcgtcttgtgcggtgttgtttgat 579  Q
    | ||||||||||| | ||||||||    
T  201434 tagtcttgtgcggcgctgtttgat 201411  T

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Target: scaffold0264 (Bit Score: 81; Significance: 8e-38; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 387 - 579
Target Start/End: Complemental strand, 20624 - 20435
Alignment:
Q  387 gttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctatatttcaatctaaataa 486  Q
    ||||||||||| || || | |||||||| |||||||||| |||||||||||||| ||||||| |||  ||||||||||| || ||||  |||||||||||    
T  20624 gttttctcttcaagtttcttcatcgaggggtggttttgg-tcaatttttgacctgaaatcacccattgtcatctttttcactctatta-aatctaaataa 20527  T
Q  487 gtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||| ||| || | | |||||| |||  |||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  20526 gtgattttcatatagatttggctttttttttta-gatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacgttgtttgat 20435  T

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Target: scaffold0426 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 359 - 499
Target Start/End: Original strand, 6156 - 6295
Alignment:
Q  359 taagccgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcat 458  Q
    ||||||| || ||||||||||||| |||||||||||||| || || | ||| |||| |||||||  |||||||| ||||||||||||||| | |||||||    
T  6156 taagccggccctaattttctctctttaggttttctcttccagtttcttcattgagg-gtggtttcaggtcaattcttgacctaaaatcacccctcttcat 6254  T
Q  459 ctttttctctatatttcaatctaaataagtgattttcacat 499  Q
    |||||| ||| |||| |||||||||||||||||||||||||    
T  6255 ctttttttctctattccaatctaaataagtgattttcacat 6295  T

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Target: scaffold0426; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 530 - 579
Target Start/End: Original strand, 6294 - 6343
Alignment:
Q  530 atctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||| |||||||||||||||||||||||||||||| |||  |||||||||    
T  6294 atcttagtgtggtggtttgttgttcgtcgtcttgtacggcattgtttgat 6343  T

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Target: scaffold0002 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 460 - 579
Target Start/End: Original strand, 453851 - 453970
Alignment:
Q  460 tttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgt 559  Q
    ||||||||| ||||| ||| |||||||||||||||||||||||| || |||||||||| |||||||| | || | | |||| |||| |||||||||||||    
T  453851 tttttctctttattttaatttaaataagtgattttcacatatatttacgttttttcttcgtgatttcgttatttgattgtgatggtgtgttgttcgtcgt 453950  T
Q  560 cttgtgcggtgttgtttgat 579  Q
    |||| |||| ||||||||||    
T  453951 cttgggcggcgttgtttgat 453970  T

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Target: scaffold0608 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 364 - 457
Target Start/End: Original strand, 64 - 157
Alignment:
Q  364 cgaccgtaattttctctctctaggttttctcttctagattttccatcgaggtgtggttttgggtcaatttttgacctaaaatcactcatcttca 457  Q
    ||||| || |||||||||||||| |||||||||  || || ||||| |||| ||||||||||||||||| || |||| ||||||||||||||||    
T  64 cgaccatagttttctctctctagcttttctcttacagtttctccattgaggggtggttttgggtcaattcttaacctgaaatcactcatcttca 157  T

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Target: scaffold0022 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 509 - 579
Target Start/End: Complemental strand, 83544 - 83477
Alignment:
Q  509 ttttttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||||||||| |||||||||||||||||||||||   | ||||||||||| ||||||||||    
T  83544 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgt---ttgtcttgtgcggcgttgtttgat 83477  T

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Target: scaffold0888 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 425 - 579
Target Start/End: Complemental strand, 1908 - 1753
Alignment:
Q  425 ggtcaatttttgacctaaaatcactcatcttcatcttttt--ctctatatttcaatctaaataagtgattttcacatatatctaggttttttcttt-gtg 521  Q
    ||||||||||||||||| ||||||   ||| |||||||||  | || | ||||||||||||||||||||||||||||| ||| ||  ||||||||| |||    
T  1908 ggtcaatttttgacctagaatcacctctctgcatcttttttcccctttctttcaatctaaataagtgattttcacatacatcaag--tttttctttcgtg 1811  T
Q  522 atttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||| |  ||| |||| |  | | |||||||||||||||||| ||| ||||||||||    
T  1810 atttcgtcgtcttagtgcgacgttctgttgttcgtcgtcttgtccggcgttgtttgat 1753  T

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Target: scaffold0113 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 452 - 579
Target Start/End: Complemental strand, 36852 - 36726
Alignment:
Q  452 tcttcatctttttctctatatttcaatctaaataagtgattttcacatatatctaggttttttctttgtgatttcataatctaagtgtggtggtttgttg 551  Q
    ||||||||||||||  | ||||||||| ||||||||||||||| ||||||| ||| ||||||||||  ||||||  |  | | |||||  || | |||||    
T  36852 tcttcatctttttcgttgtatttcaatataaataagtgatttttacatata-ctaagttttttcttcatgatttggttgtgtgagtgtcttgttgtgttg 36754  T
Q  552 ttcgtcgtcttgtgcggtgttgtttgat 579  Q
    ||||||||||||||||| ||||||||||    
T  36753 ttcgtcgtcttgtgcggagttgtttgat 36726  T

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Target: scaffold0603 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 417 - 504
Target Start/End: Original strand, 7564 - 7652
Alignment:
Q  417 tggttttgggtcaatttttgacctaaaatcactcatcttcatctttt-tctctatatttcaatctaaataagtgattttcacatatatc 504  Q
    ||||||| ||||| ||||||||||| |||||||||||| ||||||||  | || | ||||||| |||||||||| ||||||||||||||    
T  7564 tggttttaggtcattttttgacctagaatcactcatctgcatcttttacccctttctttcaatttaaataagtggttttcacatatatc 7652  T

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Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 411 - 504
Target Start/End: Complemental strand, 58327 - 58232
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctc--tatatttcaatctaaataagtgattttcacatatatc 504  Q
    |||| |||||||| ||||| |||||||||||||||||| | ||| |||| |||| ||  | | |||||||||||||||||||||| ||||||||||    
T  58327 gaggggtggttttaggtcattttttgacctaaaatcacccctctgcatccttttttccttttctttcaatctaaataagtgatttccacatatatc 58232  T

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Target: scaffold0127 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 411 - 568
Target Start/End: Original strand, 15333 - 15501
Alignment:
Q  411 gaggtgtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctc--tatatttcaatctaaataagtgattttcacatatatctagg 508  Q
    |||| |||||||| ||||| ||||||||||| |||||| | ||| |||||||||| |  | | |||||||||||||||||| |||||| || | || ||     
T  15333 gaggggtggttttaggtcattttttgacctagaatcacccctctacatctttttccccttttctttcaatctaaataagtggttttcatatctttcaagt 15432  T
Q  509 tttt---------ttctttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
    ||||         || ||||||||||| | ||||||||| |||| | ||||||||||||||||||||||    
T  15433 ttttccttttgtgttttttgtgatttcgtcatctaagtgcggtgttgtgttgttcgtcgtcttgtgcgg 15501  T

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Target: scaffold0049 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 416 - 504
Target Start/End: Complemental strand, 71525 - 71437
Alignment:
Q  416 gtggttttgggtcaatttttgacctaaaatcactcatcttcatctttttctctata-tttcaatctaaataagtgattttcacatatatc 504  Q
    |||||||| ||||| |||||||||||||||||| | ||| ||| |||| |||| |  |||||||||||| ||||| ||||||||||||||    
T  71525 gtggttttaggtca-tttttgacctaaaatcacccctctacatattttcctcttttctttcaatctaaacaagtggttttcacatatatc 71437  T

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Target: scaffold0372 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 514
Target Start/End: Complemental strand, 9782 - 9725
Alignment:
Q  457 atctttttctctatatttcaatctaaataagtgattttcacatatatctaggtttttt 514  Q
    ||||||||||||  |||| ||| |||||||||| |||| |||||||||||| ||||||    
T  9782 atctttttctctccattttaatataaataagtggttttgacatatatctagatttttt 9725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 504
Target Start/End: Complemental strand, 10269 - 10193
Alignment:
Q  430 atttttgacctaaaatcactcatcttcatctttttctc--tatatttcaatctaaataagtgattttcacatatatc 504  Q
    |||||| ||||| |||||||||||| ||| ||||| ||  | | |||| ||||||||||||| ||||||||||||||    
T  10269 atttttcacctagaatcactcatctacatatttttttcgttttctttccatctaaataagtggttttcacatatatc 10193  T

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Target: scaffold0347 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 579
Target Start/End: Original strand, 6016 - 6048
Alignment:
Q  547 tgttgttcgtcgtcttgtgcggtgttgtttgat 579  Q
    |||||||||||||||||||||| ||||||||||    
T  6016 tgttgttcgtcgtcttgtgcggcgttgtttgat 6048  T

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Target: scaffold0017 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 516 - 568
Target Start/End: Complemental strand, 32878 - 32826
Alignment:
Q  516 tttgtgatttcataatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 568  Q
    ||||||||||| |  |||||||| || | ||||||||||||||||||||||||    
T  32878 tttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcgg 32826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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