View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8512_low_6 (Length: 235)

Name: NF8512_low_6
Description: NF8512
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8512_low_6
NF8512_low_6
[»] scaffold0695 (1 HSPs)
scaffold0695 (1-235)||(4145-4380)
[»] chr8 (5 HSPs)
chr8 (1-235)||(14126249-14126484)
chr8 (1-227)||(14090877-14091103)
chr8 (45-110)||(40306923-40306988)
chr8 (5-110)||(5339277-5339383)
chr8 (1-110)||(36831376-36831486)
[»] chr7 (6 HSPs)
chr7 (1-173)||(20216825-20216998)
chr7 (58-109)||(28244028-28244079)
chr7 (43-110)||(13121481-13121548)
chr7 (1-110)||(46272150-46272260)
chr7 (1-110)||(47247262-47247372)
chr7 (1-95)||(30713279-30713374)
[»] chr6 (3 HSPs)
chr6 (8-118)||(13681605-13681716)
chr6 (43-112)||(25062845-25062914)
chr6 (42-117)||(12384867-12384942)
[»] scaffold0964 (1 HSPs)
scaffold0964 (1-117)||(3140-3257)
[»] chr4 (2 HSPs)
chr4 (1-114)||(901203-901317)
chr4 (63-114)||(23148791-23148842)
[»] chr2 (1 HSPs)
chr2 (1-110)||(21638838-21638948)
[»] chr3 (3 HSPs)
chr3 (1-107)||(42722577-42722684)
chr3 (25-110)||(51897048-51897134)
chr3 (1-95)||(8627009-8627104)
[»] chr1 (2 HSPs)
chr1 (1-110)||(28794055-28794165)
chr1 (1-110)||(42098948-42099058)
[»] chr5 (2 HSPs)
chr5 (64-112)||(17222176-17222224)
chr5 (1-108)||(10014545-10014653)


Alignment Details
Target: scaffold0695 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 4380 - 4145
Alignment:
Q  1 attaataaatacctctccctcatacgccttcctgaccaagtgacatggtacctccatagcatggtagtgtagtgtgggccactgggatagtcatcaagag 100  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4380 attaataaatacctctccctgagacgccttcctgaccaagtgacatggtacctccatagcatggtagtgtcgtgtgggccactgggatagtcatcaagag 4281  T
Q  101 gctcagggtctggcaccatgggacgcttccccctccaccttcgctgcgactcgccgtcttccatatcctcctccattgcctcaagctcctccccaaactt 200  Q
    |||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||| || |||||||||||||| ||| |||    
T  4280 gctcagggtctggcaccacgggacgcttccccctccgccttcgctacgactcgccgtcttccatatcctcctccgttccctcaagctcctcctcaagctt 4181  T
Q  201 ctcctcctccatttgatgttgatgatg-atgtccat 235  Q
    ||||||||||||||||||||||||||| ||||||||    
T  4180 ctcctcctccatttgatgttgatgatgcatgtccat 4145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 188; Significance: 1e-102; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 14126249 - 14126484
Alignment:
Q  1 attaataaatacctctccctcatacgccttcctgaccaagtgacatggtacctccatagcatggtagtgtagtgtgggccactgggatagtcatcaagag 100  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14126249 attaataaatacctctccctgagacgccttcctgaccaagtgacatggtacctccatagcatggtagtgtcgtgtgggccactgggatagtcatcaagag 14126348  T
Q  101 gctcagggtctggcaccatgggacgcttccccctccaccttcgctgcgactcgccgtcttccatatcctcctccattgcctcaagctcctccccaaactt 200  Q
    |||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||| || |||||||||||||| ||| |||    
T  14126349 gctcagggtctggcaccacgggacgcttccccctccgccttcgctacgactcgccgtcttccatatcctcctccgttccctcaagctcctcctcaagctt 14126448  T
Q  201 ctcctcctccatttgatgttgatgatg-atgtccat 235  Q
    ||||||||||||||||||||||||||| ||||||||    
T  14126449 ctcctcctccatttgatgttgatgatgcatgtccat 14126484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 14090877 - 14091103
Alignment:
Q  1 attaataaatacctctccctcatacgccttcctgaccaagtgacatggtacctccatagcatggtagtgtagtgtgggccactgggatagtcatcaagag 100  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||  |||||||| | |||||||||||||||||||||| ||||||    
T  14090877 attaataaatacctctccctcagacgccttcctgaacaagtgacatggtacctccataatatggtagtctcgtgtgggccactgggatagtcaacaagag 14090976  T
Q  101 gctcagggtctggcaccatgggacgcttccccctccaccttcgctgcgactcgccgtcttccatatcctcctccattgcctcaagctcctccccaaactt 200  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14090977 gctcagggtctggcaccatgggacgcttccccctccgcctttgctgcgactcgccgtcttccatatcctcctccattgcctcaagctcctcctcaaactt 14091076  T
Q  201 ctcctcctccatttgatgttgatgatg 227  Q
    ||||||||||||||||| || ||||||    
T  14091077 ctcctcctccatttgattttaatgatg 14091103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 40306923 - 40306988
Alignment:
Q  45 atggtacctccatagcatggtagtgtagtgtgggccactgggatagtcatcaagaggctcagggtc 110  Q
    |||||||||||| |||| |  ||||| ||||||||||| ||||||||||||||| |||||||||||    
T  40306923 atggtacctccacagcaggccagtgtcgtgtgggccaccgggatagtcatcaagtggctcagggtc 40306988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 5339383 - 5339277
Alignment:
Q  5 ataaatacctctccctcatacgccttcctgaccaagtg-acatggtacctccatagcatggtagtgtagtgtgggccactgggatagtcatcaagaggct 103  Q
    ||||||||||| || |||  |||||||||| ||| ||| ||||||||| |||| |||| |  ||| | ||||||||||| |||||||||||| || ||||    
T  5339383 ataaatacctcgccatcacccgccttcctggccacgtgcacatggtacttccaaagcacgtcagtctcgtgtgggccaccgggatagtcatctagtggct 5339284  T
Q  104 cagggtc 110  Q
    |||||||    
T  5339283 cagggtc 5339277  T

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Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 36831486 - 36831376
Alignment:
Q  1 attaataaatacctctccctcatacgccttcctgaccaagtg-acatggtacctccatagcatggtagtgtagtgtgggccactgggatagtcatcaaga 99  Q
    ||||||||||||||| || |||  |||||||||| ||| ||| ||||||||| |||| |||| | |||| | |||||||||||  ||||| ||||| ||     
T  36831486 attaataaatacctcgccatcagtcgccttcctggccacgtgcacatggtacttccacagcaggctagtctcgtgtgggccacctggataatcatccagt 36831387  T
Q  100 ggctcagggtc 110  Q
    |||||||||||    
T  36831386 ggctcagggtc 36831376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 1e-31; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 20216825 - 20216998
Alignment:
Q  1 attaataaatacctctccctcatacgccttcctgaccaagtg-acatggtacctccatagcatggtagtgtagtgtgggccactgggatagtcatcaaga 99  Q
    ||||||||||||||| || ||  ||| ||||||| ||| ||| ||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| |    
T  20216825 attaataaatacctcaccatctgacgtcttcctgcccacgtgcacatggtacctccatagcagggtagtgttgtgtgggccaccgggatagtcatcaaaa 20216924  T
Q  100 ggctcagggtctggcaccatgggacgcttccccctccaccttcgctgcgactcgccgtcttccatatcctcctc 173  Q
    || ||||| ||||||||||    |||||||||| ||| |||||| || | ||||| ||||| ||||||||||||    
T  20216925 ggatcaggatctggcaccaccatacgcttccccatcctccttcgttgtggctcgctgtctttcatatcctcctc 20216998  T

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Target: chr7; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 28244079 - 28244028
Alignment:
Q  58 agcatggtagtgtagtgtgggccactgggatagtcatcaagaggctcagggt 109  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  28244079 agcagggtagtgtcgtgtgggccactgggatagtcatcaagaggctcagggt 28244028  T

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Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 110
Target Start/End: Complemental strand, 13121548 - 13121481
Alignment:
Q  43 acatggtacctccatagcatggtagtgtagtgtgggccactgggatagtcatcaagaggctcagggtc 110  Q
    ||||||||||||   ||||| ||||||| ||||||| |||| ||||||||||||||||||||||||||    
T  13121548 acatggtacctcgtcagcatagtagtgtcgtgtggggcacttggatagtcatcaagaggctcagggtc 13121481  T

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Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 46272150 - 46272260
Alignment:
Q  1 attaataaatacctctccctcatacgccttcctgaccaagtg-acatggtacctccatagcatggtagtgtagtgtgggccactgggatagtcatcaaga 99  Q
    ||||||||||||||| || |||  |||||||||| ||| ||| ||||||||| |||| |||| | |||| | |||||||||||  |||||||||||  |     
T  46272150 attaataaatacctcgccatcacccgccttcctggccacgtgcacatggtacttccaaagcaggttagtctcgtgtgggccaccaggatagtcatcgtgt 46272249  T
Q  100 ggctcagggtc 110  Q
    |||||||||||    
T  46272250 ggctcagggtc 46272260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 47247372 - 47247262
Alignment:
Q  1 attaataaatacctctccctcatacgccttcctgaccaagtg-acatggtacctccatagcatggtagtgtagtgtgggccactgggatagtcatcaaga 99  Q
    ||||| ||||||||| || |||   ||||||||| ||| ||| ||||||||| |||| |||||| |||| | ||||||||||| ||||||||||||  |     
T  47247372 attaaaaaatacctcgccatcaccagccttcctggccacgtgcacatggtacttccaaagcatgctagtctcgtgtgggccaccgggatagtcatcgtgt 47247273  T
Q  100 ggctcagggtc 110  Q
    |||||||||||    
T  47247272 ggctcagggtc 47247262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 30713279 - 30713374
Alignment:
Q  1 attaataaatacctctccctcatacgccttcctgaccaagtg-acatggtacctccatagcatggtagtgtagtgtgggccactgggatagtcatc 95  Q
    ||||||||||||||| || |||  |||||||||| ||| ||| ||||||||| |||| |||| |  ||| | ||||||||||| ||||||||||||    
T  30713279 attaataaatacctcgccatcacccgccttcctggccacgtgcacatggtacttccaaagcaggtcagtctcgtgtgggccaccgggatagtcatc 30713374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 13681716 - 13681605
Alignment:
Q  8 aatacctctccctcatacgccttcctgaccaagtg-acatggtacctccatagcatggtagtgtagtgtgggccactgggatagtcatcaagaggctcag 106  Q
    |||||||| |||||| ||||||||||| ||| ||| |||||||||||||| |||| || ||||| |||||||||||  ||||||||||||||||||||||    
T  13681716 aatacctcgccctcagacgccttcctggccacgtgcacatggtacctccacagcagggaagtgtcgtgtgggccaccaggatagtcatcaagaggctcag 13681617  T
Q  107 ggtctggcacca 118  Q
    ||| ||||||||    
T  13681616 ggtatggcacca 13681605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 25062845 - 25062914
Alignment:
Q  43 acatggtacctccatagcatggtagtgtagtgtgggccactgggatagtcatcaagaggctcagggtctg 112  Q
    ||||||||||||   ||| ||||||||| ||||||||||| |||||||||||||||||||| | ||||||    
T  25062845 acatggtacctcgtcagcttggtagtgtcgtgtgggccaccgggatagtcatcaagaggcttaaggtctg 25062914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 12384942 - 12384867
Alignment:
Q  42 gacatggtacctccatagcatggtagtgtagtgtgggccactgggatagtcatcaaga-ggctcagggtctggcacc 117  Q
    |||||||||||||   |||| |||||||| ||||||| |||| |||||||||||||||  |||||||||||| ||||    
T  12384942 gacatggtacctcatcagcagggtagtgttgtgtggg-cacttggatagtcatcaagattgctcagggtctgacacc 12384867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0964 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0964
Description:

Target: scaffold0964; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 3140 - 3257
Alignment:
Q  1 attaataaatacctctccctcatacgccttcctgacca-agtgacatggtacctccatagcatggtagtgtagtgtgggccactgggatagtcatcaaga 99  Q
    |||||||| ||||||||||||| ||||||||||| | | |  |||||||||||||  ||||| |||||||| |||||||||||  |||||   ||| |||    
T  3140 attaataagtacctctccctcagacgccttcctggctacatggacatggtacctcgttagcagggtagtgtcgtgtgggccacctggataactatccaga 3239  T
Q  100 ggctcagggtctggcacc 117  Q
    |||||| |||||||||||    
T  3240 ggctcatggtctggcacc 3257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 901317 - 901203
Alignment:
Q  1 attaataaatacctctccctcatacgccttcctgaccaagtg-acatggtacctccatagcatggtagtgtagtgtgggccactgggatagtcatcaaga 99  Q
    |||||||  |||| |||||||| |||||||| || ||| ||| ||| |||| |||   |||| |||||| | |||||||||||  |||||||||||||||    
T  901317 attaatacgtaccactccctcagacgccttcttggccacgtgtacaaggtatctcatcagcagggtagtatcgtgtgggccaccaggatagtcatcaaga 901218  T
Q  100 ggctcagggtctggc 114  Q
    |||||||||||||||    
T  901217 ggctcagggtctggc 901203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 114
Target Start/End: Original strand, 23148791 - 23148842
Alignment:
Q  63 ggtagtgtagtgtgggccactgggatagtcatcaagaggctcagggtctggc 114  Q
    |||||||| ||||||||||| ||||||||||||||||| || ||||| ||||    
T  23148791 ggtagtgtcgtgtgggccaccgggatagtcatcaagagacttagggtatggc 23148842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 21638948 - 21638838
Alignment:
Q  1 attaataaatacctctccctcatacgccttcctgaccaagtg-acatggtacctccatagcatggtagtgtagtgtgggccactgggatagtcatcaaga 99  Q
    ||||||||| ||||| || |||  |||||||||| ||| ||| |||||||||||||| | || |  ||||| ||||||||||| | |||||||||||||     
T  21638948 attaataaaaacctcgccatcagccgccttcctggccacgtgcacatggtacctccacaacaggccagtgtcgtgtgggccaccgagatagtcatcaagt 21638849  T
Q  100 ggctcagggtc 110  Q
    |||||||||||    
T  21638848 ggctcagggtc 21638838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 42722684 - 42722577
Alignment:
Q  1 attaataaatacctctccctcatacgccttcctgaccaagtg-acatggtacctccatagcatggtagtgtagtgtgggccactgggatagtcatcaaga 99  Q
    ||||||||||||| | || |||  |||||||||| ||| ||| |||||||||||||| |||| |  ||| | ||||||||||| |||||||||||| ||     
T  42722684 attaataaataccacaccatcagccgccttcctggccacgtgcacatggtacctccacagcaggccagtctcgtgtgggccaccgggatagtcatctagt 42722585  T
Q  100 ggctcagg 107  Q
    ||||||||    
T  42722584 ggctcagg 42722577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 51897134 - 51897048
Alignment:
Q  25 cgccttcctgaccaagtg-acatggtacctccatagcatggtagtgtagtgtgggccactgggatagtcatcaagaggctcagggtc 110  Q
    |||||||||| ||| ||| |||||||||||||| |||| |  ||| | ||||||||||| |||||||||||| || |||||||||||    
T  51897134 cgccttcctggccacgtgcacatggtacctccacagcaggccagtctcgtgtgggccaccgggatagtcatctagtggctcagggtc 51897048  T

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Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 8627009 - 8627104
Alignment:
Q  1 attaataaatacctctccctcatacgccttcctgaccaagtg-acatggtacctccatagcatggtagtgtagtgtgggccactgggatagtcatc 95  Q
    ||||||||||||||| || |||  |||||||||| ||| ||| ||||||||| |||| |||| |  ||| | ||||||||||| ||||||||||||    
T  8627009 attaataaatacctcgccatcacccgccttcctggccatgtgcacatggtacttccaaagcaagccagtctcgtgtgggccaccgggatagtcatc 8627104  T

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Target: chr1 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 28794055 - 28794165
Alignment:
Q  1 attaataaatacctctccctcatacgccttcctgaccaagtg-acatggtacctccatagcatggtagtgtagtgtgggccactgggatagtcatcaaga 99  Q
    ||||||||||||||| || |||  |||||||||| ||| ||| ||||||||| |||| | ||||  | | | |||||||||||||||||||||||| ||     
T  28794055 attaataaatacctcaccatcagccgccttcctggccacgtgcacatggtacttccacatcatgtcaatctcgtgtgggccactgggatagtcatctagt 28794154  T
Q  100 ggctcagggtc 110  Q
    ||||| |||||    
T  28794155 ggctcggggtc 28794165  T

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Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 42098948 - 42099058
Alignment:
Q  1 attaataaatacctctccctcatacgccttcctgaccaagtg-acatggtacctccatagcatggtagtgtagtgtgggccactgggatagtcatcaaga 99  Q
    ||||||||||||||| || |||  |||||||||| ||| ||| ||||||||| |||| |||| |  ||| | ||||||||||| |||||||||||| |      
T  42098948 attaataaatacctcgccatcagccgccttcctggccacgtgcacatggtacttccacagcaggtcagtctcgtgtgggccacggggatagtcatctaat 42099047  T
Q  100 ggctcagggtc 110  Q
    |||||||||||    
T  42099048 ggctcagggtc 42099058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 17222176 - 17222224
Alignment:
Q  64 gtagtgtagtgtgggccactgggatagtcatcaagaggctcagggtctg 112  Q
    ||||||| |||||||||| ||||||||||||||||||||| || |||||    
T  17222176 gtagtgtcgtgtgggccattgggatagtcatcaagaggcttagagtctg 17222224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 10014653 - 10014545
Alignment:
Q  1 attaataaatacctctccctcatacgccttcctgaccaagtg-acatggtacctccatagcatggtagtgtagtgtgggccactgggatagtcatcaaga 99  Q
    |||||||||||| || || |||  |||||||||| ||| ||| ||||||||| |||| |||| |  ||| | ||||||| ||| |||||||||||| ||     
T  10014653 attaataaatacatcgccatcagccgccttcctggccacgtgcacatggtacttccacagcaggccagtctcgtgtgggacaccgggatagtcatctagt 10014554  T
Q  100 ggctcaggg 108  Q
    |||||||||    
T  10014553 ggctcaggg 10014545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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