View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8513_low_3 (Length: 371)
Name: NF8513_low_3
Description: NF8513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8513_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 18 - 279
Target Start/End: Original strand, 4856204 - 4856465
Alignment:
| Q |
18 |
ggaagatgatttcagaattctgaaatcctagcaattggggaaaattaggagaacaaaattgcaatgaaaacttatgcgtaagcgcaatcacaagaaatcg |
117 |
Q |
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| T |
4856204 |
ggaagatgatttcagaattctgaaatcctagcaattggggaaaattaggagaacaaaattgcaatgaaaacttatgcgtaagagcaatcacaagaaatcg |
4856303 |
T |
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| Q |
118 |
aacaaacagaatcaaaaacgaaaacgcaagactcgcacagattcgaagcaagaattgaacaagaattgtgaaactgaatcacgaaatgtaattacgcgag |
217 |
Q |
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| T |
4856304 |
aacaaacagaatcaaaaacgaaaacgcaagactcgcacagattcgaagcaagaattgaacgagaattgtgaaactgaatcacgaaatgtaattacgcgag |
4856403 |
T |
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| Q |
218 |
aaaatcgaaacacaaaagatgaattgcaataaggaaccctaagatttgggaaaaaggtgaag |
279 |
Q |
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| T |
4856404 |
aaaatcgaaacacaaaagatgaattgctataaggaaccctaagatttgggaaaaaggtgaag |
4856465 |
T |
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