View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8514_low_3 (Length: 274)

Name: NF8514_low_3
Description: NF8514
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8514_low_3
NF8514_low_3
[»] chr4 (11 HSPs)
chr4 (12-213)||(43568122-43568314)
chr4 (114-155)||(2187753-2187794)
chr4 (115-158)||(36869849-36869892)
chr4 (114-155)||(7390595-7390636)
chr4 (114-158)||(3919189-3919233)
chr4 (114-158)||(3930102-3930146)
chr4 (114-158)||(19513317-19513361)
chr4 (114-158)||(29664588-29664632)
chr4 (114-158)||(31435673-31435717)
chr4 (119-155)||(38674431-38674467)
chr4 (114-158)||(43225153-43225197)
[»] chr1 (12 HSPs)
chr1 (114-158)||(42964538-42964582)
chr1 (117-159)||(10628242-10628284)
chr1 (114-158)||(323539-323583)
chr1 (114-158)||(15313918-15313962)
chr1 (114-158)||(26204946-26204990)
chr1 (114-158)||(27658750-27658794)
chr1 (114-158)||(28867933-28867977)
chr1 (114-158)||(41150644-41150688)
chr1 (114-158)||(49184547-49184591)
chr1 (114-158)||(49219905-49219949)
chr1 (114-158)||(50170730-50170774)
chr1 (114-158)||(50351702-50351746)
[»] chr8 (7 HSPs)
chr8 (114-158)||(45152704-45152748)
chr8 (116-158)||(39746060-39746102)
chr8 (114-159)||(35242704-35242749)
chr8 (114-158)||(16423496-16423540)
chr8 (114-158)||(22877250-22877294)
chr8 (114-158)||(44318869-44318913)
chr8 (114-158)||(45140896-45140940)
[»] chr5 (5 HSPs)
chr5 (114-158)||(2672072-2672116)
chr5 (114-158)||(11780632-11780676)
chr5 (116-158)||(33695243-33695285)
chr5 (114-158)||(12363033-12363077)
chr5 (114-158)||(22653368-22653412)
[»] chr2 (5 HSPs)
chr2 (114-158)||(44880471-44880515)
chr2 (114-158)||(2759512-2759556)
chr2 (114-158)||(6760023-6760067)
chr2 (114-158)||(8340452-8340496)
chr2 (114-158)||(38843480-38843524)
[»] chr3 (10 HSPs)
chr3 (114-155)||(35631463-35631504)
chr3 (114-158)||(20451117-20451161)
chr3 (114-158)||(21707785-21707829)
chr3 (114-158)||(37088955-37088999)
chr3 (114-158)||(38891429-38891473)
chr3 (114-158)||(42218287-42218331)
chr3 (114-158)||(44806355-44806399)
chr3 (114-158)||(45692764-45692808)
chr3 (114-158)||(46318133-46318177)
chr3 (114-158)||(54671620-54671664)
[»] scaffold0041 (1 HSPs)
scaffold0041 (114-158)||(72182-72226)
[»] scaffold0009 (1 HSPs)
scaffold0009 (114-158)||(192725-192769)
[»] chr7 (6 HSPs)
chr7 (114-158)||(10311472-10311516)
chr7 (114-158)||(27089096-27089140)
chr7 (114-158)||(27189161-27189205)
chr7 (114-158)||(35588273-35588317)
chr7 (114-158)||(40894058-40894102)
chr7 (114-158)||(45221515-45221559)
[»] chr6 (3 HSPs)
chr6 (114-158)||(11016302-11016346)
chr6 (114-158)||(23953321-23953365)
chr6 (114-158)||(28077137-28077181)


Alignment Details
Target: chr4 (Bit Score: 153; Significance: 4e-81; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 12 - 213
Target Start/End: Original strand, 43568122 - 43568314
Alignment:
Q  12 gagatgattcaaatccaattgcaggataaaaaatgaagctacatttccaacttatatagattcacatattttatgtccaaaaagaatatagattcacata 111  Q
    |||||||| |||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43568122 gagatgatccaaatccaattg-aggataaaaaatgacgctacattcccaacttatatagattcacatattttatgtccaaaaagaatatagattcacata 43568220  T
Q  112 tcatgtcattttacatttatcaactaattaaaccgttaattttaccatttaattagctaatcaattataaataatcagtcataaacaatcaaccataaat 211  Q
    ||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43568221 tcatgtcattttacatttatcaacta--------gttaattttaccatttaattagctaatcaattataaataatcagtcataaacaatcaaccataaat 43568312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 2187753 - 2187794
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaatttta 155  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  2187753 atgtcattttacatttatcaactaattgaaccgttaatttta 2187794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 158
Target Start/End: Original strand, 36869849 - 36869892
Alignment:
Q  115 tgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||    
T  36869849 tgtcattttacatttatcaaccaattaaaccgttacttttacca 36869892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 7390636 - 7390595
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaatttta 155  Q
    |||||||||||| ||||||| |||||||||| ||||||||||    
T  7390636 atgtcattttacgtttatcagctaattaaactgttaatttta 7390595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 3919233 - 3919189
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||||||| || ||||| ||| |||||||    
T  3919233 atgtcattttacatttatcaactagttgaaccgctaactttacca 3919189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 3930146 - 3930102
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||||||| || ||||  |||||||||||    
T  3930146 atgtcattttacatttatcaactagttgaacctctaattttacca 3930102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 19513361 - 19513317
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| |||||| ||||| || ||||||||    
T  19513361 atgtcattttacatttatcagctaattgaaccgctatttttacca 19513317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 29664588 - 29664632
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| |||||| ||||| || ||||||||    
T  29664588 atgtcattttacatttatcagctaattgaaccgctatttttacca 29664632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 31435673 - 31435717
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| ||| || ||| |||||||||||||    
T  31435673 atgtcattttacatttatcagctagttgaactgttaattttacca 31435717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 155
Target Start/End: Original strand, 38674431 - 38674467
Alignment:
Q  119 attttacatttatcaactaattaaaccgttaatttta 155  Q
    |||||||||||||||| |||| |||||||||||||||    
T  38674431 attttacatttatcaattaatcaaaccgttaatttta 38674467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 43225197 - 43225153
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| ||| || |||||||| ||||||||    
T  43225197 atgtcattttacatttatcagctagttgaaccgttatttttacca 43225153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000006; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 42964538 - 42964582
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||||||| || |||||||||||||||||    
T  42964538 atgtcattttacatttatcaactagttgaaccgttaattttacca 42964582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 159
Target Start/End: Complemental strand, 10628284 - 10628242
Alignment:
Q  117 tcattttacatttatcaactaattaaaccgttaattttaccat 159  Q
    ||||||||||||||||||| | || ||||||||||||||||||    
T  10628284 tcattttacatttatcaaccagttgaaccgttaattttaccat 10628242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 323539 - 323583
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| ||| || |||||||| ||||||||    
T  323539 atgtcattttacatttatcagctagttgaaccgttatttttacca 323583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 15313918 - 15313962
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| |||||| ||||| || ||||||||    
T  15313918 atgtcattttacatttatcagctaattgaaccgctatttttacca 15313962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 26204946 - 26204990
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| ||| || |||||||| ||||||||    
T  26204946 atgtcattttacatttatcagctagttgaaccgttatttttacca 26204990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 27658794 - 27658750
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    ||||||||||||||||||||  || || |||||||||||||||||    
T  27658794 atgtcattttacatttatcagttagttgaaccgttaattttacca 27658750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 28867977 - 28867933
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| |||||| ||||| || ||||||||    
T  28867977 atgtcattttacatttatcagctaattgaaccgctagttttacca 28867933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 41150688 - 41150644
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||  ||| ||||||||||| ||||||||    
T  41150688 atgtcattttacatttatcggctagttaaaccgttatttttacca 41150644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 49184591 - 49184547
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||| ||||||||| |||||||||||| ||||| |||||||||||    
T  49184591 atgtaattttacatctatcaactaattgaaccgctaattttacca 49184547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 49219949 - 49219905
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||||||| || ||||| || ||||||||    
T  49219949 atgtcattttacatttatcaactagttgaaccgctatttttacca 49219905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 50170774 - 50170730
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| ||| |||||||| || ||||||||    
T  50170774 atgtcattttacatttatcagctagttaaaccgctatttttacca 50170730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 50351702 - 50351746
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| ||| || |||||||| ||||||||    
T  50351702 atgtcattttacatttatcagctagttgaaccgttatttttacca 50351746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 45152704 - 45152748
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| ||| || |||||||||||||||||    
T  45152704 atgtcattttacatttatcagctagttgaaccgttaattttacca 45152748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 39746102 - 39746060
Alignment:
Q  116 gtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||||| || ||||| |||||||||||    
T  39746102 gtcattttacatttatcaactagttgaaccgctaattttacca 39746060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 159
Target Start/End: Complemental strand, 35242749 - 35242704
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttaccat 159  Q
    |||||||||||||||||||| |||||| ||||| || |||||||||    
T  35242749 atgtcattttacatttatcagctaattgaaccgctatttttaccat 35242704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 16423496 - 16423540
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| ||| || |||||||| ||||||||    
T  16423496 atgtcattttacatttatcagctagttgaaccgttatttttacca 16423540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 22877294 - 22877250
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||| ||||||||| ||||| |||||| |||||||||||||||||    
T  22877294 atgtaattttacatctatcagctaattgaaccgttaattttacca 22877250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 44318869 - 44318913
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    ||||||||||| ||||| ||||||||| ||||| |||||||||||    
T  44318869 atgtcattttaaatttaacaactaattgaaccgctaattttacca 44318913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 45140940 - 45140896
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| ||| |||||||| || ||||||||    
T  45140940 atgtcattttacatttatcagctagttaaaccgctatttttacca 45140896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 2672072 - 2672116
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| ||| ||||||||||| ||||||||    
T  2672072 atgtcattttacatttatcagctagttaaaccgttatttttacca 2672116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 11780632 - 11780676
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    ||||||||||||||||||||||||||| || || |||||||||||    
T  11780632 atgtcattttacatttatcaactaattgaatcgctaattttacca 11780676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 33695243 - 33695285
Alignment:
Q  116 gtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||| |||||||||||  |||||||||||    
T  33695243 gtcattttacatttatcagctaattaaaccactaattttacca 33695285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 12363077 - 12363033
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| ||| || |||||||| ||||||||    
T  12363077 atgtcattttacatttatcagctagttgaaccgttatttttacca 12363033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 22653368 - 22653412
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| ||| || ||||| |||||||||||    
T  22653368 atgtcattttacatttatcagctagttgaaccgctaattttacca 22653412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 44880471 - 44880515
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    ||||||||||||||||||||| || || |||||||||||||||||    
T  44880471 atgtcattttacatttatcaattagtttaaccgttaattttacca 44880515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 2759512 - 2759556
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| ||| || ||||| |||||||||||    
T  2759512 atgtcattttacatttatcagctagttgaaccgctaattttacca 2759556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 6760067 - 6760023
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||| ||||| | |||||| |||||||||||||||||    
T  6760067 atgtcattttacgtttataagctaattgaaccgttaattttacca 6760023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 8340452 - 8340496
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| |||||| ||||| || ||||||||    
T  8340452 atgtcattttacatttatcagctaattgaaccgctatttttacca 8340496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 38843480 - 38843524
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| ||| || ||||| |||||||||||    
T  38843480 atgtcattttacatttatcagctagttgaaccgctaattttacca 38843524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 30; Significance: 0.00000009; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 35631463 - 35631504
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaatttta 155  Q
    ||||||||||| ||||||||||||||| |||| |||||||||    
T  35631463 atgtcattttatatttatcaactaatttaaccattaatttta 35631504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 20451117 - 20451161
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| ||| || ||||| |||||||||||    
T  20451117 atgtcattttacatttatcagctagttgaaccgctaattttacca 20451161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 21707785 - 21707829
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||||||| || ||||| || ||||||||    
T  21707785 atgtcattttacatttatcaactagttgaaccgctatttttacca 21707829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 37088955 - 37088999
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| ||| |||||||| || ||||||||    
T  37088955 atgtcattttacatttatcagctagttaaaccgctatttttacca 37088999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 38891473 - 38891429
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| ||| || |||||||| ||||||||    
T  38891473 atgtcattttacatttatcagctagttgaaccgttatttttacca 38891429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 42218287 - 42218331
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| ||| || ||||| |||||||||||    
T  42218287 atgtcattttacatttatcagctagttcaaccgctaattttacca 42218331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 44806399 - 44806355
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||| | ||| || |||||||||||||||||    
T  44806399 atgtcattttacatttataagctagttgaaccgttaattttacca 44806355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 45692808 - 45692764
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||| ||||||||| ||||| |||||| |||||||||||||||||    
T  45692808 atgtaattttacatctatcagctaattgaaccgttaattttacca 45692764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 46318177 - 46318133
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||| ||||||||||||||| |||||| ||||| |||||||||||    
T  46318177 atgtaattttacatttatcagctaattgaaccgctaattttacca 46318133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 54671664 - 54671620
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| ||| || |||||||| ||||||||    
T  54671664 atgtcattttacatttatcagctagttgaaccgttatttttacca 54671620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 72226 - 72182
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||| |||||||||||  ||||| |||||||||||||||||    
T  72226 atgtcattctacatttatcagttaattgaaccgttaattttacca 72182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 192725 - 192769
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| ||| || ||||| |||||||||||    
T  192725 atgtcattttacatttatcagctagttgaaccgctaattttacca 192769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 29; Significance: 0.0000004; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 10311516 - 10311472
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| |||||| ||||| || ||||||||    
T  10311516 atgtcattttacatttatcagctaattgaaccgctatttttacca 10311472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 27089140 - 27089096
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| ||| || |||||||| ||||||||    
T  27089140 atgtcattttacatttatcagctagttgaaccgttatttttacca 27089096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 27189161 - 27189205
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| ||| || |||||||| ||||||||    
T  27189161 atgtcattttacatttatcagctagttgaaccgttatttttacca 27189205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 35588273 - 35588317
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| ||| |||||||| || ||||||||    
T  35588273 atgtcattttacatttatcagctagttaaaccgctatttttacca 35588317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 40894058 - 40894102
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||| |||||||||||  ||||| |||||||||||||||||    
T  40894058 atgtcattctacatttatcagttaattgaaccgttaattttacca 40894102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 45221559 - 45221515
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||||||| || ||||| || ||||||||    
T  45221559 atgtcattttacatttatcaactagttgaaccgctatttttacca 45221515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 29; Significance: 0.0000004; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 11016302 - 11016346
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| ||| || ||||| |||||||||||    
T  11016302 atgtcattttacatttatcagctagttgaaccgctaattttacca 11016346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 23953365 - 23953321
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||| ||||||||||| |||||||  |||||||||||    
T  23953365 atgtcattttacgtttatcaactagttaaaccactaattttacca 23953321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 28077137 - 28077181
Alignment:
Q  114 atgtcattttacatttatcaactaattaaaccgttaattttacca 158  Q
    |||||||||||||||||||| ||| || ||||| |||||||||||    
T  28077137 atgtcattttacatttatcagctagttgaaccgctaattttacca 28077181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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