View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8515_low_5 (Length: 259)

Name: NF8515_low_5
Description: NF8515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8515_low_5
NF8515_low_5
[»] chr7 (76 HSPs)
chr7 (41-259)||(13814822-13815040)
chr7 (43-259)||(40495247-40495461)
chr7 (41-259)||(30587731-30587949)
chr7 (39-259)||(19865380-19865602)
chr7 (46-259)||(40667359-40667572)
chr7 (66-259)||(22391416-22391608)
chr7 (48-258)||(14790134-14790343)
chr7 (68-259)||(28538996-28539187)
chr7 (43-224)||(30080664-30080845)
chr7 (66-259)||(40495755-40495948)
chr7 (68-259)||(14603090-14603281)
chr7 (48-259)||(26415973-26416184)
chr7 (68-259)||(23548439-23548630)
chr7 (68-259)||(35455844-35456035)
chr7 (68-230)||(39342499-39342661)
chr7 (66-247)||(25189066-25189247)
chr7 (66-259)||(30524293-30524486)
chr7 (46-190)||(32650591-32650735)
chr7 (68-190)||(23455144-23455266)
chr7 (89-256)||(41442927-41443098)
chr7 (68-191)||(9784827-9784950)
chr7 (47-178)||(45984359-45984490)
chr7 (47-178)||(45988719-45988850)
chr7 (66-192)||(43791128-43791254)
chr7 (66-223)||(3905523-3905680)
chr7 (68-259)||(30629097-30629289)
chr7 (48-218)||(36328664-36328837)
chr7 (47-257)||(45966967-45967176)
chr7 (76-197)||(42816597-42816718)
chr7 (66-233)||(33310842-33311009)
chr7 (130-258)||(18938841-18938969)
chr7 (97-247)||(18926665-18926811)
chr7 (104-259)||(23695982-23696137)
chr7 (66-227)||(15990929-15991088)
chr7 (66-144)||(18789189-18789267)
chr7 (97-251)||(37460743-37460897)
chr7 (74-144)||(18789563-18789633)
chr7 (46-112)||(40853987-40854053)
chr7 (178-259)||(46700354-46700435)
chr7 (44-91)||(31913234-31913281)
chr7 (209-259)||(32650727-32650777)
chr7 (66-115)||(6498737-6498786)
chr7 (41-81)||(14603286-14603326)
chr7 (83-217)||(5976451-5976578)
chr7 (42-81)||(31632718-31632757)
chr7 (70-218)||(34037765-34037908)
chr7 (171-233)||(34114477-34114539)
chr7 (43-81)||(43955514-43955552)
chr7 (66-115)||(26162109-26162158)
chr7 (66-115)||(29639187-29639236)
chr7 (44-81)||(39342666-39342703)
chr7 (44-81)||(40110735-40110772)
chr7 (44-112)||(46069402-46069475)
chr7 (41-81)||(28539192-28539232)
chr7 (41-81)||(35776979-35777019)
chr7 (46-81)||(26162161-26162196)
chr7 (46-81)||(34398973-34399008)
chr7 (46-81)||(35455804-35455839)
chr7 (43-81)||(2057392-2057430)
chr7 (38-80)||(2057520-2057562)
chr7 (181-259)||(2411465-2411543)
chr7 (66-112)||(31632760-31632806)
chr7 (66-115)||(35776927-35776976)
chr7 (48-81)||(43955638-43955671)
chr7 (41-81)||(5644672-5644712)
chr7 (41-81)||(6498789-6498829)
chr7 (46-81)||(23548635-23548670)
chr7 (46-77)||(31913309-31913340)
chr7 (66-112)||(5644715-5644761)
chr7 (47-81)||(9784955-9784989)
chr7 (66-112)||(29065857-29065903)
chr7 (39-81)||(29639239-29639281)
chr7 (43-81)||(40110862-40110900)
chr7 (43-81)||(40854094-40854132)
chr7 (44-77)||(25189254-25189287)
chr7 (44-81)||(29065817-29065854)
[»] chr2 (82 HSPs)
chr2 (46-259)||(8736283-8736496)
chr2 (46-259)||(6749175-6749388)
chr2 (66-259)||(28740634-28740827)
chr2 (46-259)||(20935725-20935936)
chr2 (73-257)||(7611732-7611916)
chr2 (41-259)||(41585532-41585750)
chr2 (41-259)||(21504463-21504679)
chr2 (46-259)||(32840034-32840247)
chr2 (66-257)||(45094315-45094506)
chr2 (66-259)||(7167509-7167702)
chr2 (70-259)||(13017821-13018009)
chr2 (64-259)||(12263462-12263658)
chr2 (58-259)||(1730083-1730283)
chr2 (66-259)||(17905692-17905883)
chr2 (66-247)||(30698319-30698500)
chr2 (68-259)||(1583651-1583842)
chr2 (49-247)||(7309617-7309820)
chr2 (68-259)||(39630265-39630455)
chr2 (68-259)||(44255674-44255865)
chr2 (68-230)||(769076-769238)
chr2 (68-230)||(33189128-33189290)
chr2 (66-234)||(32839515-32839683)
chr2 (68-259)||(11141345-11141536)
chr2 (48-255)||(44205503-44205711)
chr2 (68-259)||(35047521-35047712)
chr2 (98-241)||(14306667-14306810)
chr2 (66-259)||(7227853-7228047)
chr2 (68-258)||(3092322-3092506)
chr2 (47-230)||(28021975-28022156)
chr2 (42-258)||(11594817-11595039)
chr2 (66-231)||(740742-740907)
chr2 (77-248)||(11606762-11606934)
chr2 (70-259)||(2274631-2274819)
chr2 (66-191)||(11036380-11036505)
chr2 (70-259)||(31613854-31614046)
chr2 (43-111)||(11595334-11595402)
chr2 (48-111)||(11607241-11607304)
chr2 (128-192)||(2924824-2924888)
chr2 (197-255)||(11037177-11037235)
chr2 (46-112)||(14537274-14537340)
chr2 (142-191)||(42941047-42941096)
chr2 (44-103)||(11684674-11684733)
chr2 (99-178)||(11981629-11981708)
chr2 (43-97)||(19231289-19231343)
chr2 (43-112)||(3345760-3345829)
chr2 (66-115)||(11532239-11532288)
chr2 (48-112)||(11824755-11824819)
chr2 (52-111)||(7684468-7684527)
chr2 (42-81)||(33189295-33189334)
chr2 (39-81)||(1583847-1583889)
chr2 (43-81)||(10480116-10480154)
chr2 (145-191)||(11595406-11595452)
chr2 (145-191)||(11607308-11607354)
chr2 (66-156)||(40026102-40026192)
chr2 (44-81)||(769034-769071)
chr2 (44-81)||(11141303-11141340)
chr2 (66-115)||(11793933-11793982)
chr2 (44-81)||(14365698-14365735)
chr2 (135-191)||(767280-767336)
chr2 (37-81)||(3092273-3092317)
chr2 (126-186)||(11981471-11981531)
chr2 (45-81)||(14537198-14537234)
chr2 (135-227)||(29278891-29278983)
chr2 (41-81)||(41461639-41461679)
chr2 (106-191)||(2701886-2701971)
chr2 (43-81)||(11684596-11684634)
chr2 (164-254)||(14404860-14404950)
chr2 (66-112)||(41461590-41461636)
chr2 (74-115)||(10480165-10480206)
chr2 (44-81)||(17180295-17180332)
chr2 (44-81)||(27033488-27033525)
chr2 (43-99)||(10244265-10244321)
chr2 (46-85)||(3345848-3345887)
chr2 (94-192)||(11775460-11775559)
chr2 (52-103)||(11824704-11824755)
chr2 (46-81)||(14365823-14365858)
chr2 (46-77)||(35047721-35047752)
chr2 (105-258)||(36272324-36272474)
chr2 (46-88)||(2924778-2924820)
chr2 (66-112)||(27033528-27033574)
chr2 (80-164)||(6429132-6429217)
chr2 (48-81)||(11793897-11793930)
[»] chr8 (74 HSPs)
chr8 (46-259)||(34008799-34009012)
chr8 (49-259)||(26520291-26520501)
chr8 (66-259)||(13144621-13144814)
chr8 (66-259)||(33986042-33986235)
chr8 (71-259)||(6416227-6416414)
chr8 (68-259)||(29257203-29257394)
chr8 (68-259)||(33377149-33377340)
chr8 (68-259)||(44346530-44346721)
chr8 (68-259)||(29482658-29482850)
chr8 (66-241)||(9982674-9982849)
chr8 (44-191)||(36625145-36625292)
chr8 (46-243)||(29611388-29611575)
chr8 (66-259)||(31980335-31980528)
chr8 (66-233)||(8049292-8049458)
chr8 (66-229)||(24044998-24045161)
chr8 (40-259)||(7079343-7079562)
chr8 (48-247)||(24510141-24510340)
chr8 (97-259)||(40733953-40734115)
chr8 (66-259)||(14276-14469)
chr8 (102-259)||(10593145-10593302)
chr8 (66-259)||(28324514-28324707)
chr8 (70-257)||(35404596-35404783)
chr8 (66-241)||(15186687-15186862)
chr8 (47-171)||(34388527-34388650)
chr8 (66-259)||(31976440-31976627)
chr8 (68-258)||(1088135-1088320)
chr8 (66-163)||(44889392-44889489)
chr8 (66-259)||(15718235-15718429)
chr8 (74-176)||(35978942-35979041)
chr8 (45-160)||(8469514-8469629)
chr8 (119-227)||(6460770-6460878)
chr8 (41-115)||(30444929-30445003)
chr8 (77-177)||(43167660-43167760)
chr8 (135-256)||(7668746-7668867)
chr8 (198-259)||(44889776-44889837)
chr8 (100-188)||(24063719-24063807)
chr8 (99-224)||(33422891-33423017)
chr8 (78-133)||(28190681-28190736)
chr8 (43-91)||(14799976-14800024)
chr8 (131-190)||(28190593-28190652)
chr8 (44-102)||(7202863-7202921)
chr8 (43-81)||(33377345-33377383)
chr8 (44-94)||(42739947-42739997)
chr8 (66-115)||(23011772-23011821)
chr8 (46-91)||(30435340-30435385)
chr8 (41-85)||(7202930-7202974)
chr8 (144-192)||(10794993-10795041)
chr8 (37-81)||(32626082-32626126)
chr8 (46-81)||(3853616-3853651)
chr8 (46-81)||(3858074-3858109)
chr8 (44-115)||(21465569-21465645)
chr8 (216-259)||(26520754-26520797)
chr8 (46-81)||(29257399-29257434)
chr8 (43-81)||(17110866-17110904)
chr8 (43-81)||(36103098-36103136)
chr8 (66-115)||(515528-515577)
chr8 (44-77)||(14991690-14991723)
chr8 (44-81)||(27322697-27322734)
chr8 (66-115)||(36103139-36103188)
chr8 (44-81)||(42711404-42711441)
chr8 (50-103)||(42740015-42740068)
chr8 (207-259)||(8469679-8469731)
chr8 (207-259)||(28190552-28190603)
chr8 (48-80)||(29482856-29482888)
chr8 (46-94)||(42711304-42711352)
chr8 (46-81)||(33902667-33902702)
chr8 (50-81)||(44346726-44346757)
chr8 (46-84)||(8409944-8409982)
chr8 (46-80)||(14800085-14800119)
chr8 (43-112)||(38573470-38573544)
chr8 (43-81)||(40046801-40046839)
chr8 (44-81)||(23011732-23011769)
chr8 (215-248)||(43167623-43167656)
chr8 (49-81)||(35979052-35979084)
[»] chr5 (92 HSPs)
chr5 (46-259)||(33146191-33146404)
chr5 (54-259)||(17542200-17542405)
chr5 (44-259)||(15270693-15270908)
chr5 (44-259)||(28489479-28489694)
chr5 (70-259)||(10314691-10314880)
chr5 (46-259)||(34105089-34105302)
chr5 (46-259)||(35111240-35111457)
chr5 (66-259)||(32249937-32250130)
chr5 (75-259)||(9894161-9894345)
chr5 (66-259)||(22303709-22303902)
chr5 (68-259)||(927342-927532)
chr5 (116-259)||(40089656-40089799)
chr5 (68-230)||(41762083-41762245)
chr5 (69-248)||(12479948-12480127)
chr5 (39-178)||(22305105-22305244)
chr5 (66-256)||(35379381-35379570)
chr5 (105-259)||(8264585-8264739)
chr5 (45-197)||(37241012-37241162)
chr5 (48-259)||(6772052-6772260)
chr5 (66-247)||(17493016-17493197)
chr5 (66-191)||(30519042-30519166)
chr5 (66-191)||(30559382-30559506)
chr5 (66-190)||(37241506-37241634)
chr5 (66-186)||(14834862-14834982)
chr5 (147-259)||(22768186-22768298)
chr5 (48-151)||(28490013-28490115)
chr5 (46-162)||(22302539-22302656)
chr5 (66-259)||(8674317-8674508)
chr5 (67-164)||(17492582-17492679)
chr5 (66-217)||(11601077-11601226)
chr5 (72-197)||(31316205-31316330)
chr5 (66-157)||(22766990-22767081)
chr5 (71-192)||(17444336-17444456)
chr5 (126-217)||(11409279-11409370)
chr5 (135-259)||(37090722-37090846)
chr5 (123-190)||(9894060-9894127)
chr5 (66-131)||(40090381-40090446)
chr5 (47-115)||(12064451-12064519)
chr5 (43-102)||(2550325-2550384)
chr5 (67-142)||(37090320-37090395)
chr5 (66-132)||(8255065-8255130)
chr5 (72-197)||(31367932-31368058)
chr5 (172-259)||(28490109-28490196)
chr5 (46-88)||(33146061-33146103)
chr5 (66-115)||(37722877-37722926)
chr5 (107-191)||(21541478-21541562)
chr5 (42-81)||(25935325-25935364)
chr5 (43-81)||(40643941-40643979)
chr5 (43-81)||(41762250-41762288)
chr5 (44-81)||(2316376-2316413)
chr5 (44-81)||(15374084-15374121)
chr5 (206-259)||(37240977-37241030)
chr5 (207-259)||(9894018-9894070)
chr5 (207-259)||(22305056-22305108)
chr5 (46-81)||(15804322-15804357)
chr5 (46-81)||(22303905-22303940)
chr5 (46-85)||(34982309-34982348)
chr5 (42-77)||(40090453-40090488)
chr5 (120-259)||(6955323-6955463)
chr5 (43-81)||(34982213-34982251)
chr5 (48-81)||(2721595-2721628)
chr5 (43-80)||(9764335-9764372)
chr5 (207-248)||(14834976-14835017)
chr5 (66-115)||(19533890-19533939)
chr5 (70-115)||(20320631-20320676)
chr5 (66-115)||(25935273-25935322)
chr5 (48-81)||(28828369-28828402)
chr5 (211-259)||(22302654-22302702)
chr5 (46-81)||(9764462-9764497)
chr5 (50-81)||(9894357-9894388)
chr5 (54-153)||(12991276-12991374)
chr5 (46-81)||(20523133-20523168)
chr5 (44-75)||(23092092-23092123)
chr5 (46-81)||(26281304-26281339)
chr5 (46-81)||(37722929-37722964)
chr5 (47-81)||(3563278-3563312)
chr5 (43-81)||(5658773-5658811)
chr5 (181-247)||(13064831-13064897)
chr5 (39-81)||(15804418-15804460)
chr5 (47-81)||(20523257-20523291)
chr5 (47-81)||(33245407-33245441)
chr5 (197-259)||(33995718-33995780)
chr5 (48-94)||(40643838-40643884)
chr5 (43-81)||(40809338-40809376)
chr5 (48-81)||(19533942-19533975)
chr5 (66-115)||(37145484-37145533)
chr5 (48-81)||(37145536-37145569)
chr5 (41-77)||(6634010-6634046)
chr5 (89-153)||(13064899-13064963)
chr5 (41-81)||(16515142-16515182)
chr5 (207-259)||(31368041-31368093)
chr5 (134-174)||(40157961-40158001)
[»] chr1 (80 HSPs)
chr1 (41-259)||(37447201-37447419)
chr1 (66-259)||(37036791-37036984)
chr1 (51-259)||(44571225-44571432)
chr1 (66-259)||(8224806-8224999)
chr1 (67-247)||(39887166-39887346)
chr1 (66-259)||(37448243-37448436)
chr1 (66-259)||(28632429-28632620)
chr1 (69-255)||(35491198-35491384)
chr1 (43-225)||(41823036-41823218)
chr1 (42-233)||(50471764-50471955)
chr1 (46-259)||(15467805-15468023)
chr1 (66-255)||(49216183-49216373)
chr1 (66-258)||(37447745-37447937)
chr1 (43-239)||(41822405-41822601)
chr1 (66-259)||(44570716-44570909)
chr1 (74-259)||(49659262-49659448)
chr1 (66-234)||(31166348-31166516)
chr1 (73-257)||(34003506-34003690)
chr1 (39-213)||(48953580-48953753)
chr1 (41-250)||(13181601-13181810)
chr1 (50-259)||(21267653-21267861)
chr1 (52-249)||(52135477-52135674)
chr1 (46-216)||(32128048-32128218)
chr1 (66-258)||(6470530-6470721)
chr1 (68-230)||(946415-946576)
chr1 (66-250)||(10166537-10166720)
chr1 (48-204)||(41822594-41822751)
chr1 (46-217)||(47820226-47820401)
chr1 (65-246)||(32201806-32201987)
chr1 (90-255)||(23956208-23956373)
chr1 (70-244)||(946955-947129)
chr1 (66-234)||(31195494-31195662)
chr1 (66-190)||(42230758-42230883)
chr1 (68-255)||(32647341-32647526)
chr1 (66-175)||(32287858-32287968)
chr1 (66-255)||(51847890-51848077)
chr1 (158-259)||(43619719-43619820)
chr1 (105-220)||(1902138-1902253)
chr1 (66-223)||(41481303-41481460)
chr1 (46-112)||(32572940-32573006)
chr1 (43-112)||(15245457-15245526)
chr1 (70-155)||(34003419-34003504)
chr1 (66-158)||(43622921-43623013)
chr1 (66-115)||(26501065-26501114)
chr1 (43-103)||(5474414-5474474)
chr1 (44-112)||(40264046-40264114)
chr1 (39-103)||(17502191-17502255)
chr1 (41-112)||(23536142-23536213)
chr1 (43-102)||(45565479-45565538)
chr1 (46-112)||(37214894-37214959)
chr1 (66-116)||(47165197-47165247)
chr1 (44-81)||(23536065-23536102)
chr1 (66-115)||(24273206-24273255)
chr1 (99-164)||(39589042-39589107)
chr1 (43-103)||(34007419-34007479)
chr1 (207-259)||(42230873-42230925)
chr1 (66-206)||(52280848-52280988)
chr1 (46-81)||(15034783-15034818)
chr1 (46-81)||(24273258-24273293)
chr1 (46-81)||(30190260-30190295)
chr1 (70-191)||(28250465-28250586)
chr1 (132-224)||(32948491-32948587)
chr1 (43-81)||(43623016-43623054)
chr1 (44-81)||(4038073-4038110)
chr1 (44-81)||(15034657-15034694)
chr1 (44-81)||(26501117-26501154)
chr1 (46-103)||(34007358-34007415)
chr1 (46-85)||(17502282-17502321)
chr1 (50-81)||(27804269-27804300)
chr1 (144-191)||(33977854-33977901)
chr1 (46-81)||(34756427-34756462)
chr1 (46-80)||(4038200-4038234)
chr1 (104-174)||(12086990-12087060)
chr1 (66-112)||(34756465-34756511)
chr1 (44-77)||(27804393-27804426)
chr1 (66-111)||(45565432-45565477)
chr1 (44-76)||(31166308-31166340)
chr1 (41-81)||(44410306-44410346)
chr1 (49-81)||(45565397-45565429)
chr1 (43-103)||(47074151-47074210)
[»] chr4 (76 HSPs)
chr4 (66-259)||(29091175-29091368)
chr4 (46-255)||(53760636-53760845)
chr4 (46-255)||(56339151-56339360)
chr4 (54-259)||(17727091-17727296)
chr4 (48-255)||(46242943-46243148)
chr4 (48-255)||(52294891-52295098)
chr4 (66-259)||(16516209-16516403)
chr4 (44-255)||(54566188-54566402)
chr4 (68-259)||(2125897-2126088)
chr4 (47-247)||(4490052-4490246)
chr4 (68-259)||(35470162-35470353)
chr4 (50-215)||(40338138-40338303)
chr4 (66-259)||(41139511-41139704)
chr4 (48-191)||(42775625-42775771)
chr4 (64-247)||(24705393-24705570)
chr4 (46-256)||(26534506-26534721)
chr4 (94-259)||(13318501-13318666)
chr4 (66-259)||(10354380-10354573)
chr4 (46-197)||(40548122-40548273)
chr4 (98-259)||(47108350-47108511)
chr4 (96-259)||(42776085-42776248)
chr4 (66-191)||(46242454-46242579)
chr4 (58-225)||(27284538-27284705)
chr4 (66-259)||(19461583-19461771)
chr4 (66-191)||(42776675-42776800)
chr4 (71-250)||(52493967-52494145)
chr4 (74-258)||(31947639-31947820)
chr4 (48-188)||(56118542-56118683)
chr4 (97-248)||(24062840-24062990)
chr4 (97-248)||(29685929-29686080)
chr4 (105-259)||(30303172-30303326)
chr4 (66-190)||(16300129-16300254)
chr4 (66-141)||(1539679-1539754)
chr4 (134-227)||(13088599-13088692)
chr4 (44-111)||(21012566-21012633)
chr4 (200-259)||(42776264-42776323)
chr4 (114-192)||(17727014-17727092)
chr4 (46-112)||(26250984-26251050)
chr4 (66-227)||(9451006-9451167)
chr4 (198-259)||(17727560-17727621)
chr4 (107-191)||(30303800-30303884)
chr4 (44-103)||(14982363-14982422)
chr4 (47-103)||(4441412-4441468)
chr4 (126-213)||(18922460-18922547)
chr4 (40-81)||(36456050-36456091)
chr4 (37-81)||(31742888-31742932)
chr4 (46-81)||(31473849-31473884)
chr4 (46-81)||(36455907-36455942)
chr4 (212-259)||(46242400-46242447)
chr4 (48-103)||(46724208-46724263)
chr4 (46-81)||(49111436-49111471)
chr4 (39-81)||(857363-857405)
chr4 (43-77)||(1112602-1112636)
chr4 (43-81)||(7352936-7352974)
chr4 (140-178)||(13088694-13088732)
chr4 (106-216)||(33915502-33915612)
chr4 (106-204)||(36104891-36104989)
chr4 (70-191)||(39904638-39904759)
chr4 (130-192)||(51348587-51348648)
chr4 (48-81)||(7352814-7352847)
chr4 (66-115)||(10633070-10633119)
chr4 (49-81)||(10633035-10633067)
chr4 (43-115)||(11041039-11041110)
chr4 (46-81)||(14982280-14982315)
chr4 (46-81)||(15660307-15660342)
chr4 (46-81)||(28845995-28846030)
chr4 (47-81)||(4441338-4441372)
chr4 (39-81)||(4896756-4896798)
chr4 (46-92)||(12914093-12914139)
chr4 (66-115)||(31473887-31473936)
chr4 (44-81)||(31947588-31947625)
chr4 (44-81)||(41498614-41498651)
chr4 (48-81)||(42542991-42543024)
chr4 (44-81)||(42844541-42844578)
chr4 (66-103)||(49111396-49111433)
chr4 (41-77)||(15660178-15660214)
[»] chr3 (84 HSPs)
chr3 (44-256)||(2104750-2104962)
chr3 (66-259)||(7976586-7976779)
chr3 (73-259)||(31021724-31021911)
chr3 (47-225)||(38506751-38506929)
chr3 (106-259)||(26547093-26547246)
chr3 (43-259)||(43863792-43864007)
chr3 (66-259)||(47767470-47767663)
chr3 (66-259)||(53129684-53129877)
chr3 (68-259)||(48947645-48947836)
chr3 (66-259)||(37054432-37054625)
chr3 (37-190)||(47284113-47284266)
chr3 (68-259)||(36397830-36398021)
chr3 (68-259)||(34088611-34088802)
chr3 (77-259)||(52527085-52527268)
chr3 (44-259)||(55460356-55460567)
chr3 (66-259)||(42005794-42005987)
chr3 (66-250)||(21730940-21731123)
chr3 (68-259)||(53470269-53470461)
chr3 (66-229)||(7302384-7302547)
chr3 (66-217)||(21307415-21307566)
chr3 (68-230)||(671489-671651)
chr3 (43-197)||(35279825-35279977)
chr3 (78-259)||(6836900-6837081)
chr3 (66-227)||(30766591-30766752)
chr3 (66-228)||(47336919-47337081)
chr3 (66-225)||(46706688-46706849)
chr3 (64-192)||(26323392-26323520)
chr3 (75-255)||(34396355-34396532)
chr3 (96-245)||(15760337-15760486)
chr3 (73-259)||(28182087-28182275)
chr3 (109-245)||(46635927-46636063)
chr3 (66-239)||(31189258-31189431)
chr3 (146-259)||(30767412-30767526)
chr3 (44-232)||(36635893-36636086)
chr3 (66-174)||(50168536-50168644)
chr3 (44-115)||(54761549-54761620)
chr3 (96-162)||(30767173-30767239)
chr3 (66-217)||(44288342-44288493)
chr3 (44-123)||(9007432-9007511)
chr3 (118-218)||(1146827-1146926)
chr3 (117-205)||(48825022-48825110)
chr3 (97-191)||(1796139-1796233)
chr3 (39-112)||(28092289-28092362)
chr3 (41-112)||(46429409-46429480)
chr3 (46-115)||(47714287-47714357)
chr3 (99-259)||(40493140-40493300)
chr3 (99-247)||(46999809-46999958)
chr3 (118-224)||(32665975-32666081)
chr3 (66-115)||(8762164-8762213)
chr3 (107-191)||(20634287-20634371)
chr3 (44-111)||(332051-332118)
chr3 (39-85)||(25655399-25655445)
chr3 (48-94)||(27485474-27485520)
chr3 (43-81)||(42005990-42006028)
chr3 (43-81)||(44436255-44436293)
chr3 (43-81)||(49457340-49457378)
chr3 (46-103)||(25655315-25655372)
chr3 (207-259)||(35279790-35279842)
chr3 (44-84)||(37321619-37321659)
chr3 (104-179)||(25547368-25547442)
chr3 (46-81)||(36398026-36398061)
chr3 (125-180)||(46199241-46199296)
chr3 (46-81)||(46672840-46672875)
chr3 (46-81)||(47767432-47767467)
chr3 (50-112)||(27251916-27251978)
chr3 (43-81)||(27252018-27252056)
chr3 (46-80)||(44692822-44692856)
chr3 (43-81)||(44692946-44692984)
chr3 (129-183)||(45097671-45097725)
chr3 (130-184)||(45098239-45098293)
chr3 (46-103)||(331993-332049)
chr3 (44-81)||(9129468-9129505)
chr3 (44-81)||(9137575-9137612)
chr3 (66-115)||(19475854-19475903)
chr3 (46-91)||(26547049-26547094)
chr3 (43-112)||(39215854-39215922)
chr3 (42-81)||(671656-671695)
chr3 (46-80)||(5415908-5415942)
chr3 (39-77)||(28092207-28092245)
chr3 (66-112)||(31070444-31070490)
chr3 (35-73)||(39110489-39110527)
chr3 (45-81)||(5415782-5415818)
chr3 (44-76)||(7302344-7302376)
chr3 (215-259)||(48824943-48824987)
[»] chr6 (29 HSPs)
chr6 (67-259)||(31412940-31413132)
chr6 (43-259)||(1195348-1195564)
chr6 (43-255)||(8475176-8475388)
chr6 (67-259)||(9697501-9697693)
chr6 (66-259)||(28918203-28918395)
chr6 (70-256)||(1368519-1368704)
chr6 (66-259)||(6358093-6358286)
chr6 (73-192)||(15616270-15616389)
chr6 (70-258)||(26901607-26901795)
chr6 (107-259)||(10105118-10105269)
chr6 (73-247)||(29395373-29395547)
chr6 (153-226)||(29901951-29902024)
chr6 (131-190)||(15832760-15832820)
chr6 (66-115)||(29889420-29889469)
chr6 (66-115)||(34244966-34245015)
chr6 (66-138)||(15832504-15832576)
chr6 (42-115)||(34364752-34364830)
chr6 (43-80)||(6919832-6919869)
chr6 (43-103)||(9285731-9285791)
chr6 (46-81)||(9285647-9285682)
chr6 (46-81)||(33733432-33733467)
chr6 (43-81)||(28918162-28918200)
chr6 (84-167)||(413608-413691)
chr6 (46-81)||(13487275-13487310)
chr6 (68-115)||(13487315-13487362)
chr6 (46-81)||(34245018-34245053)
chr6 (43-81)||(8574789-8574827)
chr6 (66-112)||(9763050-9763096)
chr6 (207-259)||(15616230-15616282)
[»] scaffold0039 (1 HSPs)
scaffold0039 (46-255)||(109049-109257)
[»] scaffold0400 (2 HSPs)
scaffold0400 (66-259)||(4340-4533)
scaffold0400 (47-81)||(4536-4570)
[»] scaffold0365 (2 HSPs)
scaffold0365 (66-259)||(4984-5177)
scaffold0365 (47-81)||(5180-5214)
[»] scaffold0318 (1 HSPs)
scaffold0318 (66-259)||(2905-3097)
[»] scaffold0169 (1 HSPs)
scaffold0169 (66-247)||(4113-4293)
[»] scaffold0047 (1 HSPs)
scaffold0047 (73-249)||(50159-50335)
[»] scaffold0129 (2 HSPs)
scaffold0129 (66-257)||(19629-19820)
scaffold0129 (66-155)||(19236-19324)
[»] scaffold0014 (2 HSPs)
scaffold0014 (66-259)||(221038-221231)
scaffold0014 (96-259)||(223591-223754)
[»] scaffold0301 (1 HSPs)
scaffold0301 (68-259)||(7191-7382)
[»] scaffold0337 (3 HSPs)
scaffold0337 (42-190)||(16285-16435)
scaffold0337 (96-247)||(15720-15871)
scaffold0337 (207-259)||(16243-16295)
[»] scaffold0065 (3 HSPs)
scaffold0065 (44-190)||(9497-9644)
scaffold0065 (96-247)||(2762-2913)
scaffold0065 (207-259)||(9455-9507)
[»] scaffold0417 (1 HSPs)
scaffold0417 (99-258)||(11798-11958)
[»] scaffold0027 (1 HSPs)
scaffold0027 (66-115)||(10924-10973)
[»] scaffold0240 (1 HSPs)
scaffold0240 (46-85)||(17601-17640)
[»] scaffold1562 (2 HSPs)
scaffold1562 (42-80)||(401-439)
scaffold1562 (48-81)||(529-562)
[»] scaffold1158 (2 HSPs)
scaffold1158 (42-80)||(2154-2192)
scaffold1158 (48-81)||(2031-2064)
[»] scaffold0009 (1 HSPs)
scaffold0009 (44-81)||(42102-42139)
[»] scaffold0048 (1 HSPs)
scaffold0048 (48-81)||(82945-82978)
[»] scaffold0044 (1 HSPs)
scaffold0044 (39-99)||(56280-56345)


Alignment Details
Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 76)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 41 - 259
Target Start/End: Complemental strand, 13815040 - 13814822
Alignment:
Q  41 ctctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatg 140  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  13815040 ctcttagagtgtgtttggataggggaatgttttgagggaattcaaatactttgatgtgaattccattatttggataataatttgaagaattttcaaaatg 13814941  T
Q  141 atggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttc 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  13814940 atggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatgacatctaaaagttaagaatttcaaaattcttcattgttataaattttc 13814841  T
Q  241 aaattttgcaatttggtcc 259  Q
    ||||||| |||||||||||    
T  13814840 aaatttttcaatttggtcc 13814822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 43 - 259
Target Start/End: Original strand, 40495247 - 40495461
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgat 142  Q
    |||||||||||||||||||||| |||||   ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  40495247 ctaagagtgtgtttggatggggaaatgtc--gagggaattcaaatactttgatgtgaattctattgtttggataataatttgaagaattttcaaaatgat 40495344  T
Q  143 ggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaa 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  40495345 ggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgttataaattttcaa 40495444  T
Q  243 attttgcaatttggtcc 259  Q
    |||||||||||||||||    
T  40495445 attttgcaatttggtcc 40495461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 41 - 259
Target Start/End: Complemental strand, 30587949 - 30587731
Alignment:
Q  41 ctctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatg 140  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||| ||| ||||||||||||    
T  30587949 ctctaggagtgtgtttggatgggggaatgttttgagggaattcaaatactttaatgtgaattccattgtttggataatagtttgaagtattttcaaaatg 30587850  T
Q  141 atggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttc 240  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||| |||| ||  ||||||| ||||||||||||||||| |||||||||||| |||||    
T  30587849 atggaaatttatgaagtattttgttcaagtcaaatttagagaattttaaatgacacctaaaagctaagaatttcaaaattcatcattgttataatttttc 30587750  T
Q  241 aaattttgcaatttggtcc 259  Q
    |||||||||| ||||||||    
T  30587749 aaattttgcattttggtcc 30587731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 39 - 259
Target Start/End: Complemental strand, 19865602 - 19865380
Alignment:
Q  39 ttctctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaa 138  Q
    |||||| |||||||||||||||| ||||||||||||||| |||||||||| ||||| ||||||| |||||||| ||||||||||||||||||||||||||    
T  19865602 ttctctgagagtgtgtttggatgagggaatgttttgaggaaattcaaatactttgaggtgaatttcattgttttgataataatttaaagaattttcaaaa 19865503  T
Q  139 tgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttata--aat 236  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||  |||||| || ||||||| |||||||||||||||||||    |    
T  19865502 tgatggtaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaaattcagaattttaaaattcttcattgttatattttt 19865403  T
Q  237 tttcaaattttgcaatttggtcc 259  Q
    |||||||||||||| ||||||||    
T  19865402 tttcaaattttgcattttggtcc 19865380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 46 - 259
Target Start/End: Original strand, 40667359 - 40667572
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatgga 145  Q
    ||||||||||||||||||  ||||||||||||||||| ||||| ||||   |||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  40667359 agagtgtgtttggatgggaaaatgttttgagggaatttaaatactttgggatgaatttcattgtttggataataatttgaagcattttcaaaatgatgga 40667458  T
Q  146 aatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaatt 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| ||||||||||||| |||||||||||| | | |||||| |||    
T  40667459 aatttatgaagtattttgttcaagttaaatttaaagaatttcaaatgacacctaaaagctaagaatttcaaatttcttcattgttgttatttttcatatt 40667558  T
Q  246 ttgcaatttggtcc 259  Q
    ||||| ||||||||    
T  40667559 ttgcattttggtcc 40667572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 66 - 259
Target Start/End: Complemental strand, 22391608 - 22391416
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    ||||||||||| ||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  22391608 aatgttttgagagaatttaaatattttgaggtgaatttcattgtttggataataatttaaagaatttt-aaaatgatggaaatttctgaagtattttgtt 22391510  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||||| |||||||||||| ||  |||||||||||||||||||||||||||| ||||||||  || |||||||||||| ||||||||    
T  22391509 caagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcgttgttatattttatcaaattttgcattttggtcc 22391416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 48 - 258
Target Start/End: Original strand, 14790134 - 14790343
Alignment:
Q  48 agtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaa 147  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||  ||| ||||||||||||||||||||||||| ||||||||| |||    
T  14790134 agtgtgtttggatgggg-aatgttttgagggaattcaaatactttgaggtgaattttattatttggataataatttaaagaatttttaaaatgatgaaaa 14790232  T
Q  148 tttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaatttt 247  Q
    ||||| |||||||||||||||||| |||||| |||||||||||| ||  |||||||||||||||||||||| | |||||| |||||  ||||||||||||    
T  14790233 tttataaagtattttgttcaagttgaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaaattttcattcttatattttttcaaatttt 14790332  T
Q  248 gcaatttggtc 258  Q
    ||| |||||||    
T  14790333 gcattttggtc 14790343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 68 - 259
Target Start/End: Complemental strand, 28539187 - 28538996
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |    
T  28539187 tgttttgagggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttta 28539088  T
Q  168 agttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||| |||||||||||| ||  ||||||| ||||||||||||| |||||||||||| | | |||||| |||||||| ||||||||    
T  28539087 agttaaatttagagaatttcaaatgacacctaaaagctaagaatttcaaatttcttcattgttgttatttttcatattttgcattttggtcc 28538996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 43 - 224
Target Start/End: Complemental strand, 30080845 - 30080664
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgat 142  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||| ||| | |||||||||||||||||||| ||||||| ||||||||||||||||||    
T  30080845 ctaagagtgtgtttggatgggggaatgttttgaggaaatttaaatactttcaggtgaattccattgtttggatgataatttgaagaattttcaaaatgat 30080746  T
Q  143 ggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttc 224  Q
    ||||||||||||||||||||||| |||||||||||| | |||||||||| ||  |||||||||||| |||||||| ||||||    
T  30080745 ggaaatttatgaagtattttgtttaagttaaatttagaaaatttcaaatgacacctaaaagttaagtatttcaaatttcttc 30080664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 66 - 259
Target Start/End: Original strand, 40495755 - 40495948
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||    
T  40495755 aatgttttgagggaattcaaatattttggggtgaattccattgtttggataataatttgaagcatttttaaaatgatggaaatttatgaagtattttgtt 40495854  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||||| |||||||||||| ||  ||||||| ||||||||| ||| |||||||||||| | | |||||| ||||| || ||||||||    
T  40495855 caagttaaatttagagaatttcaaatgacacctaaaagctaagaattttaaatttcttcattgttgttatttttcatatttttcattttggtcc 40495948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 68 - 259
Target Start/End: Complemental strand, 14603281 - 14603090
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    |||||| |||||||||||||| ||||  || ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  14603281 tgttttaagggaattcaaatactttggggtaaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttca 14603182  T
Q  168 agttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||| |||||||||||| ||  ||||||| ||||||||||||| |||||||||||| | | |||||| |||||||| ||||||||    
T  14603181 agttaaatttagagaatttcaaatgacacctaaaagctaagaatttcaaatttcttcattgttgttatttttcatattttgcattttggtcc 14603090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 48 - 259
Target Start/End: Original strand, 26415973 - 26416184
Alignment:
Q  48 agtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaa 147  Q
    ||||||||||||| | |||||||||| |  ||||||||||| ||||| ||||||| ||| |||||||||||||||| |||||||||||||||||||||||    
T  26415973 agtgtgtttggattgaggaatgttttaaaagaattcaaatactttgaggtgaatttcatggtttggataataatttgaagaattttcaaaatgatggaaa 26416072  T
Q  148 tttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaatttt 247  Q
    |||| |||||||||||||||||| ||||||| ||||||| |||| ||  ||||||| ||||||||||||| |||||||||||||||| ||||| ||||||    
T  26416073 tttaggaagtattttgttcaagtcaaatttagagaatttgaaatgacacctaaaagctaagaatttcaaatttcttcattgttataatttttcgaatttt 26416172  T
Q  248 gcaatttggtcc 259  Q
     || ||||||||    
T  26416173 tcattttggtcc 26416184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 68 - 259
Target Start/End: Complemental strand, 23548630 - 23548439
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    |||||||||| |||||||||| ||||  |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||    
T  23548630 tgttttgaggaaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatagaaatttatgaagtattttgttca 23548531  T
Q  168 agttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||| | |||||||||| ||  ||||||| ||||||||| ||| |||||||||||| | | |||||| |||||||| ||||||||    
T  23548530 agttaaatttagaaaatttcaaatgacacctaaaagctaagaattttaaatttcttcattgttgttatttttcatattttgcattttggtcc 23548439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 68 - 259
Target Start/End: Original strand, 35455844 - 35456035
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    |||||| |||||||||||||| ||||  || ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |    
T  35455844 tgttttaagggaattcaaatactttggggtaaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttga 35455943  T
Q  168 agttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||| ||||||| |||| ||  ||||||| ||||||||||||| |||||||||||| | | |||||| |||||||| ||||||||    
T  35455944 agttaaatttagagaattttaaatgacacctaaaagctaagaatttcaaatttcttcattgttgttatttttcatattttgcattttggtcc 35456035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 68 - 230
Target Start/End: Complemental strand, 39342661 - 39342499
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    |||||| |||||||||||||| ||||  |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  39342661 tgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttca 39342562  T
Q  168 agttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgtt 230  Q
    ||||||||||| |||||||||||| ||  ||||||| ||||||||||||| || |||||||||    
T  39342561 agttaaatttagagaatttcaaataacacctaaaagctaagaatttcaaatttattcattgtt 39342499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 66 - 247
Target Start/End: Complemental strand, 25189247 - 25189066
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    ||||||||||||||||||||||| ||||| ||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  25189247 aatgttttgagggaattcaaatactttgaagtgaatttcattgtttggatgataatttgaagaattttcaaaatgatggaaatttacgaagtattttgtt 25189148  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaatttt 247  Q
    ||||||||||||| |||||||||| | || |||||||  ||| ||||||||  || ||||||||| ||| ||||||| ||||    
T  25189147 caagttaaatttagagaatttcaagtgacatctaaaaactaataatttcaattttattcattgttgtaatttttcaattttt 25189066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 66 - 259
Target Start/End: Original strand, 30524293 - 30524486
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    ||||||||||||||||||||||| ||||   |||||| |||||||||||||||||||| ||  ||||| |||||||||||||||||||||||||||||||    
T  30524293 aatgttttgagggaattcaaatactttgggatgaatttcattgtttggataataatttgaaatatttttaaaatgatggaaatttatgaagtattttgtt 30524392  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||||| |||||||||||| ||   |||||| ||||||||| ||| |||||||||||| | | |||||| |||||||| ||||||||    
T  30524393 caagttaaatttagagaatttcaaatgacacttaaaagctaagaattttaaatttcttcattgttgttatttttcatattttgcattttggtcc 30524486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 46 - 190
Target Start/End: Original strand, 32650591 - 32650735
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatgga 145  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| ||||| |||||||  ||||||||||||||||||| |||||||||||||||||||||    
T  32650591 agagtgtgtttcgatggaggaatgttttgagggaattcaaatactttgaggtgaattttattgtttggataataatttgaagaattttcaaaatgatgga 32650690  T
Q  146 aatttatgaagtattttgttcaagttaaatttaaagaatttcaaa 190  Q
    ||||||||||||||||| ||||||||||||||| | |||||||||    
T  32650691 aatttatgaagtatttttttcaagttaaatttagataatttcaaa 32650735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 68 - 190
Target Start/End: Complemental strand, 23455266 - 23455144
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  23455266 tgttttgagggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttca 23455167  T
Q  168 agttaaatttaaagaatttcaaa 190  Q
    ||||||||||| |||||||||||    
T  23455166 agttaaatttagagaatttcaaa 23455144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 89 - 256
Target Start/End: Complemental strand, 41443098 - 41442927
Alignment:
Q  89 ttttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaa----gttaaatttaaagaat 184  Q
    ||||||||||||||  ||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    ||||||||||||||||    
T  41443098 ttttgatgtgaattatattctttggataataatttgaagaattttcaaaatgatggaaatttataaagtattttgttcaagttagttaaatttaaagaat 41442999  T
Q  185 ttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttgg 256  Q
    || |||  ||   |||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||    
T  41442998 tttaaacgacacttaaaagttaagaatttcaaaattcttcattgttaaaatttttcaaattttgcattttgg 41442927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 68 - 191
Target Start/End: Complemental strand, 9784950 - 9784827
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    ||||||||||||||||||||| ||||  ||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  9784950 tgttttgagggaattcaaatactttggggtgaaatccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttca 9784851  T
Q  168 agttaaatttaaagaatttcaaat 191  Q
    ||||||||||| ||||||||||||    
T  9784850 agttaaatttagagaatttcaaat 9784827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 47 - 178
Target Start/End: Original strand, 45984359 - 45984490
Alignment:
Q  47 gagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaa 146  Q
    |||||||||||||||    |||||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  45984359 gagtgtgtttggatgaaaaaatgttttaagggaattcaaatactttgaggtgaattcaattgtttggataataatttgaagaattttcaaaatgatggaa 45984458  T
Q  147 atttatgaagtattttgttcaagttaaattta 178  Q
    ||||||||||||||||||||||||||||||||    
T  45984459 atttatgaagtattttgttcaagttaaattta 45984490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 47 - 178
Target Start/End: Original strand, 45988719 - 45988850
Alignment:
Q  47 gagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaa 146  Q
    |||||||||||||||    |||||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  45988719 gagtgtgtttggatgaaaaaatgttttaagggaattcaaatactttgaggtgaattcaattgtttggataataatttgaagaattttcaaaatgatggaa 45988818  T
Q  147 atttatgaagtattttgttcaagttaaattta 178  Q
    ||||||||||||||||||||||||||||||||    
T  45988819 atttatgaagtattttgttcaagttaaattta 45988850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 66 - 192
Target Start/End: Original strand, 43791128 - 43791254
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    ||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||| |||    
T  43791128 aatgttttgagggaattcaaatactttgaggtgaactccattgtttggataataatttgaagaattttcaaaatgatggaaatttaataagtatttggtt 43791227  T
Q  166 caagttaaatttaaagaatttcaaatt 192  Q
    ||||||||||||| |||||||||||||    
T  43791228 caagttaaatttagagaatttcaaatt 43791254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 3905680 - 3905523
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||| | |||||||||||| ||||| |||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||    
T  3905680 aatgttttcaaggaattcaaatactttgaggtgaattctattgtttggataataatttgaagaattttcaaaatgatgaaaatttatgaattattttgtt 3905581  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattctt 223  Q
    ||||||||||||| |||||||||||| ||  | ||||| || |||||||||| |||||    
T  3905580 caagttaaatttagagaatttcaaatgacagcaaaaagctaggaatttcaaatttctt 3905523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 68 - 259
Target Start/End: Original strand, 30629097 - 30629289
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    |||||| || ||||| ||||| ||||  ||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||    
T  30629097 tgttttaagagaatttaaatactttggggtgaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttatgaagtatttttttca 30629196  T
Q  168 agttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgtt-ataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||| | |||||||||| ||  ||||||  ||||||||||||| ||||||||||||  ||  |||||| |||||||| ||||||||    
T  30629197 agttaaatttagaaaatttcaaatgacacctaaaaactaagaatttcaaatttcttcattgttgttattttttcatattttgcattttggtcc 30629289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 48 - 218
Target Start/End: Complemental strand, 36328837 - 36328664
Alignment:
Q  48 agtgtgtttggatgggggaatgttttgagggaattcaaatattttgat--gtgaattccattgtttggataataatttaaagaattttcaaaatgatgga 145  Q
    ||||||||||||||||| ||||||||||| ||||||||||| ||  |   |||||||| ||| ||||||||||||||| ||||||||||||||||||||     
T  36328837 agtgtgtttggatggggtaatgttttgagagaattcaaatacttaaaaaggtgaattctattatttggataataatttgaagaattttcaaaatgatggt 36328738  T
Q  146 aatttatgaagtattttgttc-aagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaa 218  Q
    ||||||||||||||||||||| |||||||||| | |||||||||||| ||  ||||||| ||||||||| ||||    
T  36328737 aatttatgaagtattttgttctaagttaaattcagagaatttcaaatgacacctaaaagctaagaattttaaaa 36328664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 47 - 257
Target Start/End: Original strand, 45966967 - 45967176
Alignment:
Q  47 gagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaa 146  Q
    |||||||||||||| |  |||||||| | || |||| |||| |||| | |||||||  ||||||||||| |||||||  |||||||| ||||||||| ||    
T  45966967 gagtgtgtttggatagaagaatgtttggtgg-aatttaaatgtttttaggtgaattttattgtttggatgataattttgagaatttttaaaatgatgaaa 45967065  T
Q  147 atttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattt 246  Q
    ||||||||| ||||||||||||||||||||||||||||||||||  ||  ||||||  ||||||||||||| || |||||| |||||| |||||||| ||    
T  45967066 atttatgaaatattttgttcaagttaaatttaaagaatttcaaacgacaactaaaaactaagaatttcaaatttattcattcttataatttttcaaagtt 45967165  T
Q  247 tgcaatttggt 257  Q
    |||| ||||||    
T  45967166 tgcattttggt 45967176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 76 - 197
Target Start/End: Original strand, 42816597 - 42816718
Alignment:
Q  76 gggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaat 175  Q
    ||||||| ||||| ||||  |||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  42816597 gggaatttaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatgaaaatttatgaagtattttgttcaagttaaat 42816696  T
Q  176 ttaaagaatttcaaattacttc 197  Q
    ||| ||||||||||||| ||||    
T  42816697 ttagagaatttcaaatttcttc 42816718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 66 - 233
Target Start/End: Original strand, 33310842 - 33311009
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||| |||||| ||||||||||  ||| |  | |||||| ||||||||||| ||||||  ||| ||||||||||||||||||||||||||||||||||||    
T  33310842 aatgatttgagagaattcaaatccttttagattaattcctttgtttggatagtaatttgtagagttttcaaaatgatggaaatttatgaagtattttgtt 33310941  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttata 233  Q
    ||||||||||||| ||||||| |||| ||  ||||||  ||  ||||||||| |||||| ||||||||    
T  33310942 caagttaaatttagagaatttaaaatgacacctaaaacctataaatttcaaatttcttccttgttata 33311009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 130 - 258
Target Start/End: Complemental strand, 18938969 - 18938841
Alignment:
Q  130 ttttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgt 229  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||| |||||| ||  ||||||||||||||||||||||   || ||| |    
T  18938969 ttttcaaaatgatagaaatttatgaagtattttgttcaaattaaatttagagaatctcaaatgacacctaaaagttaagaatttcaaaaaatttaattct 18938870  T
Q  230 tataaattttcaaattttgcaatttggtc 258  Q
    ||||| |||||||||||| || |||||||    
T  18938869 tataatttttcaaattttacattttggtc 18938841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 97 - 247
Target Start/End: Complemental strand, 18926811 - 18926665
Alignment:
Q  97 tgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattactt 196  Q
    |||||| |||||||||||| ||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||| ||     ||| | ||      
T  18926811 tgaatttcattgtttggatgataatttgaaaaaatttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagag-----caattgacac 18926717  T
Q  197 ctaaaagttaagaatttcaaaattcttcattgttataa-attttcaaatttt 247  Q
    |||||||||||||||||| || |||||||| |||||||  ||||||||||||    
T  18926716 ctaaaagttaagaatttcgaatttcttcatggttataattttttcaaatttt 18926665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 259
Target Start/End: Original strand, 23695982 - 23696137
Alignment:
Q  104 cattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaag 203  Q
    |||||||  ||| |||||||  |||||||| |||| |||| |||||||| ||||||||||||||||||||||||| | |||||||||| || ||||||||    
T  23695982 cattgttaagatgataatttggagaatttttaaaacgatgaaaatttataaagtattttgttcaagttaaatttagaaaatttcaaatgacatctaaaag 23696081  T
Q  204 ttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
     ||||||||| ||| ||||||||| ||||   ||| ||||||||||| ||||||||    
T  23696082 ctaagaatttgaaatttcttcattcttatcgttttacaaattttgcattttggtcc 23696137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 15990929 - 15991088
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    ||||| |||| |||||||||||| |||||  | |||| |||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||     
T  15990929 aatgtcttgaaggaattcaaatactttgagataaattgcattgtttggatgataatttagagtattttcaaaatgatggaaatttatgaagtattttgt- 15991027  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcatt 227  Q
     ||||||||| || | |||||||||| |    ||||||||||||||||  || |||||||||    
T  15991028 -aagttaaatgtagaaaatttcaaatcatacataaaagttaagaattttcaatttcttcatt 15991088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 66 - 144
Target Start/End: Complemental strand, 18789267 - 18789189
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatgg 144  Q
    |||||| |||||||||||||||| ||| | |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18789267 aatgttatgagggaattcaaatactttaaggtgaattccattgtttggataataatttgaagaattttcaaaatgatgg 18789189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 97 - 251
Target Start/End: Complemental strand, 37460897 - 37460743
Alignment:
Q  97 tgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattactt 196  Q
    ||||||| ||||||||||||||| ||| ||   |||| ||||| ||  |||||||| |||||||||||| | |||||||||| | |||||||||| || |    
T  37460897 tgaattctattgtttggataatattttgaaatttttttaaaataatataaatttataaagtattttgttgatgttaaatttagaaaatttcaaatcacat 37460798  T
Q  197 ctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaa 251  Q
    ||||||  || |||||| ||| ||||| ||||||||||||||||||||| |||||    
T  37460797 ctaaaaactacgaattttaaatttctttattgttataaattttcaaattctgcaa 37460743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 18789563 - 18789633
Alignment:
Q  74 gagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatgg 144  Q
    ||||||||||||||| ||||| |||||||||||||||| ||||||||||| ||||||||| ||||||||||    
T  18789563 gagggaattcaaatactttgaggtgaattccattgtttagataataatttgaagaatttttaaaatgatgg 18789633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 46 - 112
Target Start/End: Original strand, 40853987 - 40854053
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttg 112  Q
    |||||||||||||||||||||||||||||||||||||||| || ||| | |||||||| ||||||||    
T  40853987 agagtgtgtttggatgggggaatgttttgagggaattcaactactttaaggtgaattctattgtttg 40854053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 46700354 - 46700435
Alignment:
Q  178 aaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||||||  | |||||||| ||||||||| ||||||||||||||||||||  ||| |||||||||| ||||||||    
T  46700354 aaagaatttcaaatagcatctaaaaggtaagaattttaaaattcttcattgttataatcttttaaattttgcattttggtcc 46700435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 91
Target Start/End: Original strand, 31913234 - 31913281
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaattcaaatattt 91  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||    
T  31913234 taagagtgtgtttggatgggggaatgttttgagggaattcaactattt 31913281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 32650727 - 32650777
Alignment:
Q  209 aatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  32650727 aatttcaaaattcttcattgttataatttttcaaattttgcattttggtcc 32650777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 6498786 - 6498737
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  6498786 aatgttttgagggaattcaaatactttgatgtgaataccattgtttggat 6498737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 14603326 - 14603286
Alignment:
Q  41 ctctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14603326 ctctaagagtgtgtttggatgggggaatgttttgagggaat 14603286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 217
Target Start/End: Complemental strand, 5976578 - 5976451
Alignment:
Q  83 caaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaaga 182  Q
    |||||||||| |  |||||| ||||||||| ||  ||||||| | |||||| |||||||| |||||||||||||||||||      |||||||||| |||    
T  5976578 caaatatttttagctgaatttcattgtttgaatg-taatttagataatttttaaaatgatagaaatttatgaagtatttt------gttaaatttagaga 5976486  T
Q  183 atttcaaattacttctaaaagttaagaatttcaaa 217  Q
    ||||||||| ||  |||||| |||| |||||||||    
T  5976485 atttcaaatgacacctaaaatttaataatttcaaa 5976451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 31632718 - 31632757
Alignment:
Q  42 tctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  31632718 tctaagagtgtgtttggatgggggaatgttttgagggaat 31632757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 218
Target Start/End: Complemental strand, 34037908 - 34037765
Alignment:
Q  70 ttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaag 169  Q
    |||||||  ||||||||| ||||  |||||||| |||  |||| || |||||||  ||||||||   ||||||||||||||||||||||| | ||| | |    
T  34037908 ttttgagaaaattcaaatgttttt-tgtgaatttcatcatttgaatgataatttggagaatttt---aatgatggaaatttatgaagtatctagtttatg 34037813  T
Q  170 ttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaa 218  Q
    |||||||||||| ||||||||| ||   |||||||||||||||| ||||    
T  34037812 ttaaatttaaag-atttcaaataacacataaaagttaagaatttaaaaa 34037765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 233
Target Start/End: Complemental strand, 34114539 - 34114477
Alignment:
Q  171 taaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttata 233  Q
    |||||||| |||||||||||| || ||||||||||| |||||||||| ||||||||| |||||    
T  34114539 taaatttagagaatttcaaatgacatctaaaagttaggaatttcaaatttcttcattcttata 34114477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 43955514 - 43955552
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||||||||||||||||||||||||    
T  43955514 ctaagagtgtgtttggatgggggaatgttttgagggaat 43955552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 26162158 - 26162109
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    |||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  26162158 aatgttatgagggaattcaaatactttgaggtgaattccattgtttggat 26162109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 29639236 - 29639187
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    |||||| ||||| |||||||||||||||| ||||||||||||||||||||    
T  29639236 aatgttatgaggaaattcaaatattttgaggtgaattccattgtttggat 29639187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 39342703 - 39342666
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39342703 taagagtgtgtttggatgggggaatgttttgagggaat 39342666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 40110735 - 40110772
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||||||    
T  40110735 taagagtgtgtttggatgggggaatgttttgagggaat 40110772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 46069402 - 46069475
Alignment:
Q  44 taagagtgtgtttggatgggggaatg-----ttttgagggaattcaaatattttgatgtgaattccattgtttg 112  Q
    ||||||||||||||||||||||||||     |||||||||||||||| || ||||| |||||||| ||||||||    
T  46069402 taagagtgtgtttggatgggggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttg 46069475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 28539232 - 28539192
Alignment:
Q  41 ctctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  28539232 ctcttagagtgtgtttggatgggggaatgttttgagggaat 28539192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 35777019 - 35776979
Alignment:
Q  41 ctctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  35777019 ctctaagagtgtgtttggatgagggaatgttttgagggaat 35776979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 26162196 - 26162161
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||||    
T  26162196 agagtgtgtttggatgggggaatgttttgagggaat 26162161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 34399008 - 34398973
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||||    
T  34399008 agagtgtgtttggatgggggaatgttttgagggaat 34398973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 81
Target Start/End: Original strand, 35455804 - 35455839
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||||    
T  35455804 agagtgtgtttggatgggggaatgttttgagggaat 35455839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 2057392 - 2057430
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  2057392 ctaagagtgtgtttggatgggggaatgttttgagcgaat 2057430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 80
Target Start/End: Complemental strand, 2057562 - 2057520
Alignment:
Q  38 tttctctaagagtgtgtttggatgggggaatgttttgagggaa 80  Q
    ||||||| ||||||||||||||||||||||| |||||||||||    
T  2057562 tttctcttagagtgtgtttggatgggggaatattttgagggaa 2057520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 259
Target Start/End: Original strand, 2411465 - 2411543
Alignment:
Q  181 gaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||| ||  ||||||| ||||||||||||| |||||||||||| | | |||| | |||||||| ||||||||    
T  2411465 gaatttcaaatgacacctaaaagctaagaatttcaaatttcttcattgttgttattttttatattttgcattttggtcc 2411543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 112
Target Start/End: Original strand, 31632760 - 31632806
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttg 112  Q
    |||||| |||||||||||||||| ||||| |||||||||||||||||    
T  31632760 aatgttatgagggaattcaaatactttgaggtgaattccattgtttg 31632806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 35776976 - 35776927
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    |||||| |||||||||||||||| ||||| |||||||||||| |||||||    
T  35776976 aatgttatgagggaattcaaatactttgaggtgaattccattatttggat 35776927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 43955671 - 43955638
Alignment:
Q  48 agtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||    
T  43955671 agtgtgtttggatgggggaatgttttgagggaat 43955638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 5644672 - 5644712
Alignment:
Q  41 ctctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  5644672 ctctaagagtgtgtttgaatggaggaatgttttgagggaat 5644712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 6498829 - 6498789
Alignment:
Q  41 ctctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  6498829 ctcttagagtgtgtttggatggaggaatgttttgagggaat 6498789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 23548670 - 23548635
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||| ||||||||||||||||||    
T  23548670 agagtgtgtttggatggaggaatgttttgagggaat 23548635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 77
Target Start/End: Complemental strand, 31913340 - 31913309
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagg 77  Q
    ||||||||||||||||||||||||||||||||    
T  31913340 agagtgtgtttggatgggggaatgttttgagg 31913309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 112
Target Start/End: Original strand, 5644715 - 5644761
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttg 112  Q
    |||||||||||||||||||| || ||||| |||||||| ||||||||    
T  5644715 aatgttttgagggaattcaactactttgaggtgaattctattgtttg 5644761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 81
Target Start/End: Complemental strand, 9784989 - 9784955
Alignment:
Q  47 gagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||| ||||||||||||||||||    
T  9784989 gagtgtgtttggatggaggaatgttttgagggaat 9784955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 112
Target Start/End: Original strand, 29065857 - 29065903
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttg 112  Q
    |||||||||||||||||||| || ||||| |||||||| ||||||||    
T  29065857 aatgttttgagggaattcaactactttgaggtgaattctattgtttg 29065903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Complemental strand, 29639281 - 29639239
Alignment:
Q  39 ttctctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||| ||||||||||| |||||||||||||||||| |||||||    
T  29639281 ttctttaagagtgtgtatggatgggggaatgttttcagggaat 29639239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 40110900 - 40110862
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  40110900 ctaagagtgtgtttggatggggaaatgtttcgagggaat 40110862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 40854132 - 40854094
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||||||| |||||| |||||||||    
T  40854132 ctaagagtgtgtttggatggggaaatgttctgagggaat 40854094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 77
Target Start/End: Complemental strand, 25189287 - 25189254
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagg 77  Q
    |||||||||||||||||| |||||||||||||||    
T  25189287 taagagtgtgtttggatgtgggaatgttttgagg 25189254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 29065817 - 29065854
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||||  |||||||||||||||||    
T  29065817 taagagtgtgtttggatggatgaatgttttgagggaat 29065854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 174; Significance: 1e-93; HSPs: 82)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 46 - 259
Target Start/End: Complemental strand, 8736496 - 8736283
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatgga 145  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8736496 agagtgtgtttggatgagggaatgttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttaaagaattttcaaaatgatgga 8736397  T
Q  146 aatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaatt 245  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||  |||||||||||||||||||||||||||||||||||||  ||||||||||    
T  8736396 aatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgttatattttttcaaatt 8736297  T
Q  246 ttgcaatttggtcc 259  Q
    ||||| ||||||||    
T  8736296 ttgcattttggtcc 8736283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 46 - 259
Target Start/End: Original strand, 6749175 - 6749388
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatgga 145  Q
    |||||||||||||||| || ||| ||||| |||||||||| || |||||||||||  ||||||||||||||||||||| |||||||||||||||||||||    
T  6749175 agagtgtgtttggatgaggaaatattttgtgggaattcaattactttgatgtgaaacccattgtttggataataatttgaagaattttcaaaatgatgga 6749274  T
Q  146 aatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaatt 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||  || ||||||||||||||||||||||||||||||||||||||||||||||    
T  6749275 aatttatgaagtattttgttcaagttaaatttaaagaatttcaaatgacacctgaaagttaagaatttcaaaattcttcattgttataaattttcaaatt 6749374  T
Q  246 ttgcaatttggtcc 259  Q
    ||||||||||||||    
T  6749375 ttgcaatttggtcc 6749388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 66 - 259
Target Start/End: Original strand, 28740634 - 28740827
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28740634 aatgttttgagggaattcaaatactttgatgtaaattccattgtttagatgataatttgaagaattttcaaaatgatggaaatttatgaagtattttgtt 28740733  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    |||||||||||||||||||||||||| ||  |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  28740734 caagttaaatttaaagaatttcaaatgacacctaaaagttaagaatttcaaaactcttcaatgttataaattttcaaattttgcaatttggtcc 28740827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 46 - 259
Target Start/End: Original strand, 20935725 - 20935936
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatgga 145  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||    
T  20935725 agagtgtgtttggatgggg-aatgttttgagggaattcaaatactttgatgtgaattccattgtttggatgataatttgaagaattttcaaaatgattga 20935823  T
Q  146 aatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaatt 245  Q
    |||||||||||||||||||| |||||||||||| |||||||||||| ||  ||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  20935824 aatttatgaagtattttgtttaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaatttcttgattgttat-aattttcaaatt 20935922  T
Q  246 ttgcaatttggtcc 259  Q
    ||||| ||||||||    
T  20935923 ttgcattttggtcc 20935936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 73 - 257
Target Start/End: Complemental strand, 7611916 - 7611732
Alignment:
Q  73 tgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagtta 172  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  7611916 tgagggaattcaaatactttgatgtgaattccattgtttggataagaatttgaagaattttcaaaatgatggaaatttatgaagtattttgtccaagtta 7611817  T
Q  173 aatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggt 257  Q
    ||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  7611816 aatttaaagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgttataatttttcaaattttgcattttggt 7611732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 41 - 259
Target Start/End: Complemental strand, 41585750 - 41585532
Alignment:
Q  41 ctctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatg 140  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||| ||||| ||||| |  ||||||||||||||||||| ||||||||| ||||||    
T  41585750 ctctaagagtgtgtttggatggtgaaatgttttgagggaattcaaatactttgaagtgaaatttattgtttggataataatttgaagaatttttaaaatg 41585651  T
Q  141 atggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttc 240  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||  || |||||||||||||||||||   ||||||||||||| |||||    
T  41585650 atggaaatttatgaagtattttgttgaagttaaatttaaagaatttcaaatgacaccttaaagttaagaatttcaaaaaatttcattgttataatttttc 41585551  T
Q  241 aaattttgcaatttggtcc 259  Q
    ||||||| || ||||||||    
T  41585550 aaattttacattttggtcc 41585532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 41 - 259
Target Start/End: Original strand, 21504463 - 21504679
Alignment:
Q  41 ctctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatg 140  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||| ||||||||||||||||    
T  21504463 ctcttagagtgtgtttggatcggggaatgttttgagggaattcaaatattttgagatgaattccattgtttgaataataatttgaagaattttcaaaatg 21504562  T
Q  141 atggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttc 240  Q
    | |  ||||||||||||||||||||||||||||||||| || ||||||||| ||  ||||||||||||| |||||||||||| || |||||| |||||||    
T  21504563 aagttaatttatgaagtattttgttcaagttaaatttagag-atttcaaatgacacctaaaagttaagattttcaaaattctccaatgttat-aattttc 21504660  T
Q  241 aaattttgcaatttggtcc 259  Q
    |||||||||| ||||||||    
T  21504661 aaattttgcattttggtcc 21504679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 46 - 259
Target Start/End: Complemental strand, 32840247 - 32840034
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatgga 145  Q
    ||||| |||||||||| || ||||||||||||||||| ||||| ||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  32840247 agagtatgtttggatgaggaaatgttttgagggaatttaaatactttgaggtgaatttcattgtttggataataatttgaagaattttcaaaatgatgga 32840148  T
Q  146 aatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaatt 245  Q
    |||| ||||||||||||| |||||| ||||||| ||||||| |||| ||  ||||||| ||||||||||||| |||||||||||||||| ||||||||||    
T  32840147 aattcatgaagtattttggtcaagtcaaatttagagaatttgaaataacacctaaaagctaagaatttcaaatttcttcattgttataatttttcaaatt 32840048  T
Q  246 ttgcaatttggtcc 259  Q
    ||||| ||||||||    
T  32840047 ttgcattttggtcc 32840034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 66 - 257
Target Start/End: Complemental strand, 45094506 - 45094315
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    ||||||||||||||||| || || ||| | |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  45094506 aatgttttgagggaatttaactactttaaagtgaattccattgtttggataagaatttgaagaattttcaaaatgatggaaatttatgaagtattttgtt 45094407  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggt 257  Q
    ||||||||||||| |||||||||||| ||  |||||||||||||||||||||||||||| |||||||||  |||||||||||||| ||||||    
T  45094406 caagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttccttgttataatctttcaaattttgcactttggt 45094315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 66 - 259
Target Start/End: Complemental strand, 7167702 - 7167509
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||| |||||||||||| ||||| ||||||| |||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  7167702 aatgttttgaaggaattcaaatactttgaggtgaatttcattgtttgggtaatagtttgaagaattttcaaaatgatggaaatttatgaagtattttgtt 7167603  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    |||||||||| || |||||||||||| ||  ||||||||||||||||||||||||||||||||| |||  |||||||||||| || ||||||||    
T  7167602 caagttaaatgtagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgtcatattttttcaaattttacattttggtcc 7167509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 70 - 259
Target Start/End: Original strand, 13017821 - 13018009
Alignment:
Q  70 ttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaag 169  Q
    |||| |||||||||||||| ||||| |||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||| ||||| |||||||    
T  13017821 ttttaagggaattcaaatactttgaggtgaattccattgtttggataataatttgaaggattttcaaaatgatgaaaatttatgaaatattt-gttcaag 13017919  T
Q  170 ttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||| |||||||||||| ||  |||||||||||||||||||||||||||||||| ||||| |||| |||||||||| ||||||||    
T  13017920 ttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgctataattttttaaattttgcattttggtcc 13018009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 64 - 259
Target Start/End: Original strand, 12263462 - 12263658
Alignment:
Q  64 ggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttg 163  Q
    ||||| ||||||| |||||||||||||||||  |||||| |||||||||||||||||||| ||   ||||||||||||||||||||||||||||||||||    
T  12263462 ggaatattttgagagaattcaaatattttgagttgaatttcattgtttggataataatttgaaattttttcaaaatgatggaaatttatgaagtattttg 12263561  T
Q  164 ttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataa-attttcaaattttgcaatttggtcc 259  Q
    ||||||||||||||| |||||||||||| ||  ||||||||||| ||||||||||||||||||| ||||||  ||||||||||||||| ||||||||    
T  12263562 ttcaagttaaatttagagaatttcaaatgacacctaaaagttaaaaatttcaaaattcttcattattataattttttcaaattttgcattttggtcc 12263658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 58 - 259
Target Start/End: Original strand, 1730083 - 1730283
Alignment:
Q  58 gatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagt 157  Q
    |||||| |||| ||||||||||||| ||||| |||||  |||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||     
T  1730083 gatgggagaatattttgagggaatttaaatactttgagatgaatttcattgtttggataataatttgaagaattttcaaaatgatggaa-tttatgaaga 1730181  T
Q  158 attttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggt 257  Q
    ||||||||||||||||||||| |||||||||||| ||  ||||||||||||||||||||| |||||||| ||||||| |||||||| ||| || ||||||    
T  1730182 attttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaatttcttcatcgttataatttttcaaaatttacattttggt 1730281  T
Q  258 cc 259  Q
    ||    
T  1730282 cc 1730283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 66 - 259
Target Start/End: Original strand, 17905692 - 17905883
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||| | |||||||||||||||||| |||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| ||||| |||    
T  17905692 aatgttttaaaggaattcaaatattttgaggtgaattccatt-tttggataataatttgaaggattttcaaaatgatggaaatttatgaaatattt-gtt 17905789  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||||| |||||||||||| ||  |||||||||||||||||||||||||||||||| ||||  |||| |||||||||| ||||||||    
T  17905790 caagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgctatatttttttaaattttgcattttggtcc 17905883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 66 - 247
Target Start/End: Original strand, 30698319 - 30698500
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||| ||||||||||||  |||| ||||||| |||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||    
T  30698319 aatgttttgaaggaattcaaataccttgaggtgaatttcattgtttggataatagtttgaagaattttcaaaatgatggaaatttgtgaagtattttgtt 30698418  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaatttt 247  Q
    |||||||||| || |||||||||||| ||  ||||||||||||||||||||||||||||||||| |||  ||||||||||||    
T  30698419 caagttaaatgtagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgtcatattttttcaaatttt 30698500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 68 - 259
Target Start/End: Complemental strand, 1583842 - 1583651
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    |||||| |||||||||||||| ||||  |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  1583842 tgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaagtattttcaaaatgatggaaatttatgaagtattttgttca 1583743  T
Q  168 agttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||| ||||||| |||| ||  ||||||| ||||||||||||| |||||||||||| | | |||||| ||||| || ||||||||    
T  1583742 agttaaatttagagaattttaaatgacacctaaaagctaagaatttcaaatttcttcattgttgttatttttcatattttacattttggtcc 1583651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 49 - 247
Target Start/End: Complemental strand, 7309820 - 7309617
Alignment:
Q  49 gtgtgtttggatgggggaatgttttg-----agggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatg 143  Q
    |||||||||||||||||||||| |||     |||||||||||||| ||||  |||||||||||| ||||||||||||||| ||| |||||||||||||||    
T  7309820 gtgtgtttggatgggggaatgtattgttttaagggaattcaaatactttggggtgaattccattatttggataataatttgaagcattttcaaaatgatg 7309721  T
Q  144 gaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaa 243  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||  ||||||| ||||||||||||| |||||||||||| | | |||||||     
T  7309720 gaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaagctaagaatttcaaatttcttcattgttgttatttttcaat 7309621  T
Q  244 tttt 247  Q
    ||||    
T  7309620 tttt 7309617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 68 - 259
Target Start/End: Original strand, 39630265 - 39630455
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    |||||||||||||||||||||||| || | |||||| ||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||    
T  39630265 tgttttgagggaattcaaatattt-gaggggaattctattgtttggataataatttgaactattttcaaaatgatggaaatttatgaagtattttgttca 39630363  T
Q  168 agttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||| |||||||||||| ||  ||||||| ||||||||||||| |||||||||||| | | |||||| |||||||| ||||||||    
T  39630364 agttaaatttagagaatttcaaatgacacctaaaagctaagaatttcaaatttcttcattgttgttatttttcatattttgcattttggtcc 39630455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 68 - 259
Target Start/End: Original strand, 44255674 - 44255865
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    ||||||||| ||||||||||| ||||  |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  44255674 tgttttgagagaattcaaatactttggggtgaattctattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttca 44255773  T
Q  168 agttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||| |||||||||||| ||  ||||||| ||| ||||||||| |||||||||| | | | |||||| |||||||| ||||||||    
T  44255774 agttaaatttagagaatttcaaatgacacctaaaagctaaaaatttcaaatttcttcattgctgttatttttcatattttgcattttggtcc 44255865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 68 - 230
Target Start/End: Original strand, 769076 - 769238
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    |||||| |||||||||||||| ||||  |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  769076 tgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttca 769175  T
Q  168 agttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgtt 230  Q
    ||||||||||| |||||||||||| ||  ||||||| ||||||||||||| ||||||||||||    
T  769176 agttaaatttagagaatttcaaataacacctaaaagctaagaatttcaaatttcttcattgtt 769238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 68 - 230
Target Start/End: Complemental strand, 33189290 - 33189128
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    |||||| |||||||||||||| ||||  |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  33189290 tgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttca 33189191  T
Q  168 agttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgtt 230  Q
    ||||||||||| |||||||||||| ||  ||||||| ||||||||||||| ||||||||||||    
T  33189190 agttaaatttagagaatttcaaataacacctaaaagctaagaatttcaaatttcttcattgtt 33189128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 66 - 234
Target Start/End: Complemental strand, 32839683 - 32839515
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||| || ||||||||||||| |    
T  32839683 aatgttttgagggaattcaaatactttgacgtgaattccattgtttggataataatttgaagaattttccaaatgatggaatttcatgaagtattttggt 32839584  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataa 234  Q
    ||||| ||||||| ||||||| || | ||  ||||||||||||||||||||||||||||||||||||||    
T  32839583 caagtcaaatttagagaatttgaagtgacacctaaaagttaagaatttcaaaattcttcattgttataa 32839515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 68 - 259
Target Start/End: Original strand, 11141345 - 11141536
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    |||||| |||||||||||||| ||||  ||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  11141345 tgttttaagggaattcaaatactttggggtgaattacattgtttggataataatttgaagtattttcaaaatgatggaaatttatgaagtattttgttca 11141444  T
Q  168 agttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||| ||||||| |||| ||  ||||||| ||||||||||||| ||||| |||||| | | |||||| |||||||| ||||||||    
T  11141445 agttaaatttagagaattttaaatgacacctaaaagctaagaatttcaaatttctttattgttgttatttttcatattttgcattttggtcc 11141536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 48 - 255
Target Start/End: Complemental strand, 44205711 - 44205503
Alignment:
Q  48 agtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaa 147  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||| ||| ||||||| |||| || ||||||||| |||||||||||||    
T  44205711 agtgtgtttggatggggaaatgttttgagggaattcaaatacttttatgtaaattctattatttggatgataaattgaagaattttgaaaatgatggaaa 44205612  T
Q  148 tttatgaagt-attttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattt 246  Q
    ||||||||||  |||| ||||||||||||||||| |||||||||| ||  ||||||||||| |||| |||| | ||||||||||| ||| ||||||||||    
T  44205611 tttatgaagtgtttttattcaagttaaatttaaaaaatttcaaatgacacctaaaagttaataattacaaattacttcattgttaaaaaatttcaaattt 44205512  T
Q  247 tgcaatttg 255  Q
    |||| ||||    
T  44205511 tgcattttg 44205503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 68 - 259
Target Start/End: Complemental strand, 35047712 - 35047521
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    |||||| |||||||||||||| ||||  |||||||||| ||||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||||||    
T  35047712 tgttttaagggaattcaaatactttggggtgaattccaatgtttggataataatttgaagcattttcaaaataatggaaatttataaagtattttgttca 35047613  T
Q  168 agttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||| |||||||||||| ||  ||||||| ||||||||||||| || ||||||||| | | |||||| |||||||| ||||||||    
T  35047612 agttaaatttagagaatttcaaatgacacctaaaagctaagaatttcaaattttttcattgttgttatttttcatattttgcattttggtcc 35047521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 98 - 241
Target Start/End: Complemental strand, 14306810 - 14306667
Alignment:
Q  98 gaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttc 197  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||  |    
T  14306810 gaatttcattgtttggataataatttaaataatttttaaaatgatgaaaatttatgaattattttgttcaagttaaatttaaagaatttcaaatgacacc 14306711  T
Q  198 taaaagttaagaatttcaaaattcttcattgttataaattttca 241  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  14306710 taaaagttaagaatttcaaatttcttcattgttataatttttca 14306667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 66 - 259
Target Start/End: Complemental strand, 7228047 - 7227853
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||| |||||| |||||  |||| || |||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  7228047 aatgttttgaaggaatttaaataccttgaggtaaatttcattgtttggataatagtttgaagaattttcaaaatgatggaaatttatgaagtattttgtt 7227948  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttata-aattttcaaattttgcaatttggtcc 259  Q
    |||||||||| || | |||||||||| ||  |||||| |||||||||||||||||||||||||| |||   |||||||||||| || ||||||||    
T  7227947 caagttaaatgtagaaaatttcaaatgacacctaaaaattaagaatttcaaaattcttcattgtcatatttttttcaaattttacattttggtcc 7227853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 68 - 258
Target Start/End: Original strand, 3092322 - 3092506
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    |||||||||| |||||||||| ||||  || ||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||    
T  3092322 tgttttgaggaaattcaaatactttggggtaaattccattgtttggataataatttcaagcattttcaaaatgatagaaatttatgaagtattttgttca 3092421  T
Q  168 agttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtc 258  Q
    ||||||||||| |||||||||||| ||  ||||||| ||||      ||| |||||||||||| | | |||||| |||||||| |||||||    
T  3092422 agttaaatttagagaatttcaaatgacacctaaaagctaag------aaatttcttcattgttgttatttttcatattttgcattttggtc 3092506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 47 - 230
Target Start/End: Complemental strand, 28022156 - 28021975
Alignment:
Q  47 gagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaa 146  Q
    ||||||||||||||||| ||||||||||| || ||| ||||||||| | ||||||||  ||||||  || ||||||| |||||||| |||||||||| ||    
T  28022156 gagtgtgtttggatgggtgaatgttttgacgggattgaaatatttt-aggtgaattcggttgttta-attataatttgaagaatttgcaaaatgatgaaa 28022059  T
Q  147 atttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgtt 230  Q
    |||||||| ||||||||||||||||||||||| |||||||||||| ||  ||||||| || |||||||||| ||||||||||||    
T  28022058 atttatgaggtattttgttcaagttaaatttagagaatttcaaatgacacctaaaagctaggaatttcaaatttcttcattgtt 28021975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 42 - 258
Target Start/End: Original strand, 11594817 - 11595039
Alignment:
Q  42 tctaagagtgtgtttggatgggggaatgt-----tttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttc-a 135  Q
    ||||||| |||||||||||  ||||||||     ||||| ||||| |||||| ||||| |||||||  |||||||||||||||| ||  |   ||||| |    
T  11594817 tctaagaatgtgtttggataagggaatgtaatattttgaaggaatacaaatactttgaggtgaatttaattgtttggataataagttctatttttttcaa 11594916  T
Q  136 aaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaa 235  Q
    ||||||| ||||| ||| |||||||||| |||||||||||||| |||||||||||| ||  ||||||||||||||||| ||||||||||||||||| ||     
T  11594917 aaatgatagaaatatattaagtattttgctcaagttaaatttatagaatttcaaatgacacctaaaagttaagaatttaaaaattcttcattgttacaat 11595016  T
Q  236 ttttcaaattttgcaatttggtc 258  Q
    ||||||||||||| | |||||||    
T  11595017 ttttcaaattttgtattttggtc 11595039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 740742 - 740907
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    ||||||||| | ||||||| ||  ||||| |||||||  |||||||| || ||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  740742 aatgttttgtgagaattcatatcatttgaggtgaattttattgtttgaatgataatttgaagaattttcaaaataatggaaatttatgaagtattttgtt 740841  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgtta 231  Q
    ||||||||||||| |||||||||||| |   ||||||| ||| ||||||||| |||||| ||||||    
T  740842 caagttaaatttagagaatttcaaatgagacctaaaagctaataatttcaaatttcttctttgtta 740907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 77 - 248
Target Start/End: Original strand, 11606762 - 11606934
Alignment:
Q  77 ggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttc-aaaatgatggaaatttatgaagtattttgttcaagttaaat 175  Q
    ||||| |||||| ||||| |||||||  |||||||||||||||| ||  |   ||||| |||||||| ||||||||| |||||||||| |||||||||||    
T  11606762 ggaatacaaatactttgaggtgaatttaattgtttggataataagttctatttttttcaaaaatgatagaaatttattaagtattttgctcaagttaaat 11606861  T
Q  176 ttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttg 248  Q
    ||| |||||||||||| ||  ||||||||||||||||| ||||||||||||||||| || |||||||||||||    
T  11606862 ttatagaatttcaaatgacacctaaaagttaagaatttaaaaattcttcattgttacaatttttcaaattttg 11606934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 70 - 259
Target Start/End: Complemental strand, 2274819 - 2274631
Alignment:
Q  70 ttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaag 169  Q
    |||| |||||||||||||||||| |  | ||||||||||||||||||| ||||  | || |||||||||||||||| |||||||||| ||||||||||||    
T  2274819 ttttaagggaattcaaatatttttagatcaattccattgtttggataagaattgga-gatttttcaaaatgatggagatttatgaagaattttgttcaag 2274721  T
Q  170 ttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||| |||||||||||| ||   |||||| |||||||||| || ||    |||  ||||| |||| |||||||||| ||||||||    
T  2274720 ttaaatttagagaatttcaaatgacacataaaagctaagaatttcgaattttacgattcgtataatttttaaaattttgcattttggtcc 2274631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 11036380 - 11036505
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||| | ||||||||||||  ||||  ||||||  ||| || | |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  11036380 aatgttttaaaggaattcaaatacattgagatgaattttattattagaataataatttgaagaatttttaaaatgatggaaatttatgaagtattttgtt 11036479  T
Q  166 caagttaaatttaaagaatttcaaat 191  Q
    |||||  |||||||||||||| ||||    
T  11036480 caagtataatttaaagaatttaaaat 11036505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 259
Target Start/End: Original strand, 31613854 - 31614046
Alignment:
Q  70 ttttgagggaattcaaatattttgatgtgaattccattgtttggataataattt--aaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    |||||||| |||||||||||||| | || |||| |||||||||||| |||| ||  ||| ||   | ||||||||| ||||||| |||||||||||||||    
T  31613854 ttttgaggaaattcaaatatttttaagtaaatttcattgtttggatgataaattggaaaaaaaaattaaaatgatgaaaatttacgaagtattttgttca 31613953  T
Q  168 agttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaa-attcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    |||| |||||| ||||||  |||| ||  |||||||||||||||||||||  || |||| | |||||| ||| ||||||||| | ||||||||    
T  31613954 agtttaatttacagaattaaaaatgacacctaaaagttaagaatttcaaatttttttcactcttataattttccaaattttgtattttggtcc 31614046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 11595334 - 11595402
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgttt 111  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  11595334 ctaatagtgtgtttggatggggtaatgttttgagggaattcaaatattttgaggtgaattccattgttt 11595402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 48 - 111
Target Start/End: Original strand, 11607241 - 11607304
Alignment:
Q  48 agtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgttt 111  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  11607241 agtgtgtttggatggggtaatgttttgagggaattcaaatactttgaggtgaattccattgttt 11607304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 2924824 - 2924888
Alignment:
Q  128 aattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatt 192  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||| ||| |||||||||||||    
T  2924824 aattttcaaaatgatgaaaatttattaagtattttgttcaagttaaaattagagaatttcaaatt 2924888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 11037177 - 11037235
Alignment:
Q  197 ctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttg 255  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||    
T  11037177 ctaaaagttaagaatttcaaatttcttcattgttataatttttcaaattttgcattttg 11037235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 46 - 112
Target Start/End: Complemental strand, 14537340 - 14537274
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttg 112  Q
    |||||||||||||||||||||||||||||||||||||||| || ||| | |||||||| ||||||||    
T  14537340 agagtgtgtttggatgggggaatgttttgagggaattcaactactttaaggtgaattctattgtttg 14537274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 42941047 - 42941096
Alignment:
Q  142 tggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaat 191  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  42941047 tggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaat 42941096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 11684733 - 11684674
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattc 103  Q
    ||||||||||||||||||| |||||||||||||||||||||| || ||||| ||||||||    
T  11684733 taagagtgtgtttggatggaggaatgttttgagggaattcaactactttgaggtgaattc 11684674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 11981708 - 11981629
Alignment:
Q  99 aattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaattta 178  Q
    ||||||||||||||||| | |||||| |||||||| ||||||||  ||||||||| ||| |||||| |||||||||||||    
T  11981708 aattccattgtttggatgagaatttagagaatttttaaaatgataaaaatttatggagtgttttgtccaagttaaattta 11981629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 19231343 - 19231289
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgt 97  Q
    |||||| |||||||||||||||||||||||||||||||||||||||  |||||||    
T  19231343 ctaagattgtgtttggatgggggaatgttttgagggaattcaaataagttgatgt 19231289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 3345760 - 3345829
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttg 112  Q
    |||| |||||||||||||||||||||||||||||||||||||| || ||| | || ||||| ||||||||    
T  3345760 ctaaaagtgtgtttggatgggggaatgttttgagggaattcaactactttaaggtaaattctattgtttg 3345829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 11532288 - 11532239
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  11532288 aatgttttgagggaattcaaatactttgaggtgaattccattgtttggat 11532239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 112
Target Start/End: Complemental strand, 11824819 - 11824755
Alignment:
Q  48 agtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttg 112  Q
    |||||||||||||||||||||||||||||||||||||| || ||| | |||||||  ||||||||    
T  11824819 agtgtgtttggatgggggaatgttttgagggaattcaactactttaaggtgaattatattgtttg 11824755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 7684468 - 7684527
Alignment:
Q  52 tgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgttt 111  Q
    |||||||||||  |||||||| ||||||||||||||| |||| |||||||||||||||||    
T  7684468 tgtttggatggaagaatgtttggagggaattcaaatactttggtgtgaattccattgttt 7684527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 33189334 - 33189295
Alignment:
Q  42 tctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  33189334 tctaagagtgtgtttggatgggggaatgttttgagggaat 33189295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 81
Target Start/End: Complemental strand, 1583889 - 1583847
Alignment:
Q  39 ttctctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  1583889 ttctcttagagtgtgtttggatgggggaatgttttgagggaat 1583847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 10480116 - 10480154
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10480116 ctaagagtgtgtttggatgggggaatgttttgagggaat 10480154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 11595406 - 11595452
Alignment:
Q  145 aaatttatgaagtattttgttcaagttaaatttaaagaatttcaaat 191  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||    
T  11595406 aaatttataaagtattttgttcaagttaaatttagagaatttcaaat 11595452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 11607308 - 11607354
Alignment:
Q  145 aaatttatgaagtattttgttcaagttaaatttaaagaatttcaaat 191  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||    
T  11607308 aaatttataaagtattttgttcaagttaaatttagagaatttcaaat 11607354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 156
Target Start/End: Original strand, 40026102 - 40026192
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaag 156  Q
    |||||||||||| |||| ||||| ||||| |||||||| |||||||| |||||| ||| ||   |||| ||||||||| ||||||||||||    
T  40026102 aatgttttgaggaaatttaaatactttgaggtgaattctattgtttgaataatagttttaaatttttttaaaatgatgtaaatttatgaag 40026192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 769034 - 769071
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||||||    
T  769034 taagagtgtgtttggatgggggaatgttttgagggaat 769071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 11141303 - 11141340
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11141303 taagagtgtgtttggatgggggaatgttttgagggaat 11141340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 115
Target Start/End: Original strand, 11793933 - 11793982
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    |||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  11793933 aatgttatgagggaattcaaatactttgaggtgaattccattgtttggat 11793982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 14365698 - 14365735
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14365698 taagagtgtgtttggatgggggaatgttttgagggaat 14365735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 191
Target Start/End: Original strand, 767280 - 767336
Alignment:
Q  135 aaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaat 191  Q
    ||||||||||||||||||||||| |||||| |||||| |||||  ||||||||||||    
T  767280 aaaatgatggaaatttatgaagttttttgtccaagttcaattttgagaatttcaaat 767336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 3092273 - 3092317
Alignment:
Q  37 atttctctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||    
T  3092273 atttctctaagagtgtatttggatggaggaatgttttgagggaat 3092317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 186
Target Start/End: Complemental strand, 11981531 - 11981471
Alignment:
Q  126 agaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaattt 186  Q
    |||||| ||||||||| ||||||||||||| | |||||| | |||||||||||||||||||    
T  11981531 agaattatcaaaatgacggaaatttatgaaatgttttgtactagttaaatttaaagaattt 11981471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 14537198 - 14537234
Alignment:
Q  45 aagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||||||||||||||||||||||    
T  14537198 aagagtgtgtttggatgggggaatgttttgagggaat 14537234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 29278983 - 29278891
Alignment:
Q  135 aaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcatt 227  Q
    ||||||||| | |||||||||||||||| ||||||||||||||  ||||| ||||||    |||||||| |||||| |||||| || ||||||    
T  29278983 aaaatgatgaacatttatgaagtattttattcaagttaaatttcgagaatatcaaatggtatctaaaagctaagaaattcaaatttattcatt 29278891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 41461679 - 41461639
Alignment:
Q  41 ctctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  41461679 ctcttagagtgtgtttggatgggggaatgttttgagggaat 41461639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 191
Target Start/End: Complemental strand, 2701971 - 2701886
Alignment:
Q  106 ttgtttggataat-aatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaat 191  Q
    |||||||||| || |||| |||||||| | ||||||||| ||||||||||| |||||||||||| ||||||||| ||| ||| ||||    
T  2701971 ttgtttggatgattaattcaaagaattcttaaaatgatgaaaatttatgaa-tattttgttcaaattaaatttagagagttttaaat 2701886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 11684596 - 11684634
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  11684596 ctaagaatgtgtttggatgggggaatgttttgagggaat 11684634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 254
Target Start/End: Complemental strand, 14404950 - 14404860
Alignment:
Q  164 ttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaattt 254  Q
    ||||||||||||||||||||||| |||| ||  |||||||  | ||||| ||||  |||||||| |||||  |||||||||||| ||||||    
T  14404950 ttcaagttaaatttaaagaattttaaatgacacctaaaagcaaggaattccaaatgtcttcattcttatattttttcaaattttacaattt 14404860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 112
Target Start/End: Complemental strand, 41461636 - 41461590
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttg 112  Q
    |||||||||||||||||||| |||||||| |||||||| ||||||||    
T  41461636 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 41461590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 115
Target Start/End: Original strand, 10480165 - 10480206
Alignment:
Q  74 gagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  10480165 gagggaattcaaatactttgaggtgaattccattgtttggat 10480206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 17180295 - 17180332
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||| |||||||||||||||||||    
T  17180295 taagagtgtgtttggatgagggaatgttttgagggaat 17180332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 27033488 - 27033525
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  27033488 taagagtgtgtttggatgggggaatgttttgagagaat 27033525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 10244321 - 10244265
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtga 99  Q
    |||||||||| |||| ||||||||||||||| ||||||||||| || ||||| ||||    
T  10244321 ctaagagtgtatttgaatgggggaatgttttaagggaattcaactactttgaggtga 10244265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 3345887 - 3345848
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaa 85  Q
    |||| |||||||||||||| ||||||||||||||||||||    
T  3345887 agagcgtgtttggatggggaaatgttttgagggaattcaa 3345848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 192
Target Start/End: Original strand, 11775460 - 11775559
Alignment:
Q  94 atgtgaattccattgtttggataata-atttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatt 192  Q
    |||| ||||| ||||||| ||| ||| ||||| | |||||| ||||| |  ||| |||||||| ||||||||  || |||||||||||||||||||||||    
T  11775460 atgtaaattctattgtttagatgatagatttagacaatttttaaaataaatgaattttatgaattattttgtcaaaattaaatttaaagaatttcaaatt 11775559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 103
Target Start/End: Original strand, 11824704 - 11824755
Alignment:
Q  52 tgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattc 103  Q
    ||||||||||| |||||||||||||||||||||| || |||||  |||||||    
T  11824704 tgtttggatggaggaatgttttgagggaattcaactactttgagatgaattc 11824755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 14365858 - 14365823
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||| ||||||||||||||||||    
T  14365858 agagtgtgtttggatggaggaatgttttgagggaat 14365823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 77
Target Start/End: Complemental strand, 35047752 - 35047721
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagg 77  Q
    ||||||||||||||||||||||||||||||||    
T  35047752 agagtgtgtttggatgggggaatgttttgagg 35047721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 258
Target Start/End: Complemental strand, 36272474 - 36272324
Alignment:
Q  105 attgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagt 204  Q
    ||||||||||| ||||||| || |||||| |||||| || |||||||| |||   ||||| ||| || |||||| || ||||||||| || | ||||||     
T  36272474 attgtttggatgataatttgaataatttttaaaatggtgcaaatttataaag---tttgtccaacttgaatttagagcatttcaaatgacatttaaaagc 36272378  T
Q  205 taagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtc 258  Q
    || ||||||||||  || |  || |||||| || || ||||||||| |||||||    
T  36272377 tacgaatttcaaatgtccttcttcttataatttgtcgaattttgcattttggtc 36272324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 2924778 - 2924820
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaata 88  Q
    ||||||||||||||| |  ||||||||||||||||||||||||    
T  2924778 agagtgtgtttggatagaagaatgttttgagggaattcaaata 2924820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 112
Target Start/End: Original strand, 27033528 - 27033574
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttg 112  Q
    |||||||||||||||||||| || ||||| |||||||| ||||||||    
T  27033528 aatgttttgagggaattcaactactttgaggtgaattctattgtttg 27033574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 164
Target Start/End: Complemental strand, 6429217 - 6429132
Alignment:
Q  80 attcaaatattttgatgtgaattccattgtttggataataa-tttaaagaattttcaaaatgatggaaatttatgaagtattttgt 164  Q
    |||||||||||   |||| |||| ||||||||| || |||| ||| ||||||||||||||||| |||| |||||  ||||||||||    
T  6429217 attcaaatattcctatgtaaatttcattgtttgaatgataaattttaagaattttcaaaatgaaggaattttatcgagtattttgt 6429132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 11793897 - 11793930
Alignment:
Q  48 agtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||| ||||||||||||    
T  11793897 agtgtgtttggatgggggaatattttgagggaat 11793930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 170; Significance: 3e-91; HSPs: 74)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 46 - 259
Target Start/End: Original strand, 34008799 - 34009012
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatgga 145  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34008799 agagtgtgtttggatgggggaatgttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttaaagaattttcaaaatgatgga 34008898  T
Q  146 aatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaatt 245  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||   ||||||||||||||||||||||||||||||||||||  |||||||| |    
T  34008899 aatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacataaaagttaagaatttcaaaattcttcattgttatattttttcaaaat 34008998  T
Q  246 ttgcaatttggtcc 259  Q
    ||||| ||||||||    
T  34008999 ttgcattttggtcc 34009012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 49 - 259
Target Start/End: Complemental strand, 26520501 - 26520291
Alignment:
Q  49 gtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaat 148  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26520501 gtgtgtttggatgagggaatgttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaat 26520402  T
Q  149 ttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttg 248  Q
    |||||||||||||| ||||||| ||||||| ||||||| |||| ||   | |||| |||||||||||||| |||| |||||||||| |||||||||||||    
T  26520401 ttatgaagtattttattcaagtcaaatttagagaatttgaaatgacactttaaagctaagaatttcaaaactctttattgttataatttttcaaattttg 26520302  T
Q  249 caatttggtcc 259  Q
    |  ||||||||    
T  26520301 cgttttggtcc 26520291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 66 - 259
Target Start/End: Original strand, 13144621 - 13144814
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||    
T  13144621 aatgttatgagggaattcaaatactttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatgagaatttatgaagtattttgtt 13144720  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    |||||| |||||| |||||||||||| ||  ||||||| ||||||||||||||||| ||||||||||||  ||||||| |||||| ||||||||    
T  13144721 caagttcaatttagagaatttcaaatgacacctaaaaggtaagaatttcaaaattcatcattgttataatctttcaaaatttgcattttggtcc 13144814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 66 - 259
Target Start/End: Original strand, 33986042 - 33986235
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    ||||||||||| ||||||||||| ||||| ||||||| |||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||| |    
T  33986042 aatgttttgagagaattcaaatactttgaggtgaatttcattgtttagataataatttgaagaattttcaaaatgatggaaattcatgaagtattttggt 33986141  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||| ||||||| ||||||| |||| ||  ||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||    
T  33986142 caagtcaaatttagagaatttgaaatgacacctaaaagttaagaatttcaaaattcttcattgttacaatttttcaaattttgcattttggtcc 33986235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 71 - 259
Target Start/End: Original strand, 6416227 - 6416414
Alignment:
Q  71 tttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagt 170  Q
    ||||| || ||||||||| ||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  6416227 tttgaagggattcaaatactttgaagtgaattccattgttttgataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaact 6416326  T
Q  171 taaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    |||||||| | |||||||||| ||  || ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  6416327 taaatttagaaaatttcaaatgac-acttaaagttaagaatttcaaaattcttcattgttataatttttcaaattttgcattttggtcc 6416414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 68 - 259
Target Start/End: Complemental strand, 29257394 - 29257203
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    |||||| |||||||||||||| ||||  |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  29257394 tgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttca 29257295  T
Q  168 agttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||| |||||||||||| ||  ||||||| ||||||||||||| |||||||||||| | | |||||| |||||||| ||||||||    
T  29257294 agttaaatttagagaatttcaaatgacacctaaaagctaagaatttcaaatttcttcattgttgttatttttcatattttgcattttggtcc 29257203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 68 - 259
Target Start/End: Complemental strand, 33377340 - 33377149
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  33377340 tgttttgagggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttacgaagtattttgttca 33377241  T
Q  168 agttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||| |||||||||||| ||  ||||||  ||||||||||||| |||||||||||| | | |||||| |||||||| ||||||||    
T  33377240 agttaaatttagagaatttcaaatgacacctaaaaactaagaatttcaaatttcttcattgttgttatttttcatattttgcattttggtcc 33377149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 68 - 259
Target Start/End: Complemental strand, 44346721 - 44346530
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    |||||| |||||||||||||| ||||  |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |    
T  44346721 tgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttga 44346622  T
Q  168 agttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||| |||||||||||| ||  |||||||  |||||||||||| |||||||||||| | | |||||| |||||||| ||||||||    
T  44346621 agttaaatttagagaatttcaaatgacacctaaaagcaaagaatttcaaatttcttcattgttgttatttttcatattttgcattttggtcc 44346530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 68 - 259
Target Start/End: Complemental strand, 29482850 - 29482658
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  29482850 tgttttgagggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttca 29482751  T
Q  168 agttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgtt-ataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||| |||||||||||| ||   |||||  ||||||||||||| ||||||||||||  ||  |||||| |||||||| ||||||||    
T  29482750 agttaaatttagagaatttcaaatgacacttaaaaactaagaatttcaaatttcttcattgttgttattttttcatattttgcattttggtcc 29482658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 66 - 241
Target Start/End: Original strand, 9982674 - 9982849
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    ||||||||||| ||||| ||||||||||| |||||||||||||||| ||||||||||| ||||||||| ||||||||| |||||||||||||||||||||    
T  9982674 aatgttttgagagaatttaaatattttgaggtgaattccattgtttagataataatttgaagaatttttaaaatgatgaaaatttatgaagtattttgtt 9982773  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttca 241  Q
    |||||||||||||||||||||||||| || |||||||  ||||||||| ||| ||||| ||| |||||| ||||||    
T  9982774 caagttaaatttaaagaatttcaaatgacatctaaaaactaagaatttgaaatttctttattcttataatttttca 9982849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 44 - 191
Target Start/End: Complemental strand, 36625292 - 36625145
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatg 143  Q
    ||||||||||||||||||  ||||| |||||||||||||||| ||||| |||||||| |||||||||| ||||||||||| |||||||||||||||||||    
T  36625292 taagagtgtgtttggatgaaggaatattttgagggaattcaattatttcgatgtgaaatccattgtttagataataatttgaagaattttcaaaatgatg 36625193  T
Q  144 gaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaat 191  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  36625192 gaaatttatgaagtattttgatcaagttaaatttaaagaatttcaaat 36625145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 46 - 243
Target Start/End: Original strand, 29611388 - 29611575
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatgga 145  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||| ||||||||||||||||         
T  29611388 agagtgtgtttggatgggggaatgttttgagggaattcaaatactttgaggtgaatttcattgtttggataataatttgaagaattttcaaaatg----- 29611482  T
Q  146 aatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaa 243  Q
         ||||| |||||||||||||||||||||| |||||||||||| ||   |||||| ||||||||||||| |||||||||||||||| ||||||||    
T  29611483 -----atgaaatattttgttcaagttaaatttagagaatttcaaataacacttaaaagctaagaatttcaaatttcttcattgttataatttttcaaa 29611575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 66 - 259
Target Start/End: Complemental strand, 31980528 - 31980335
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||| |||||||||||||||||||  ||||||| |||| ||||||||||||||| | | |||||||||||||||||||||||||||||||||||||    
T  31980528 aatgttttaagggaattcaaatattttggggtgaatttcattatttggataataatttgatgtattttcaaaatgatggaaatttatgaagtattttgtt 31980429  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||||| |||||||||||| ||   |||||| ||||||||| ||| |||||||||||| | | |||||| |||||||| ||||||||    
T  31980428 caagttaaatttagagaatttcaaatgacacttaaaagctaagaattttaaatttcttcattgttgttatttttcatattttgcattttggtcc 31980335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 66 - 233
Target Start/End: Original strand, 8049292 - 8049458
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    ||||||||||||||||||||||| ||||| || |||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  8049292 aatgttttgagggaattcaaatactttgaggtaaatttcattgtttggataataatttgaagaattttcaaaatgattgaaatttatgaagtattttgtt 8049391  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttata 233  Q
    ||||||||||||| |||| ||||| | ||   ||| ||||||||||||||||||||||||||||||||    
T  8049392 caagttaaatttagagaacttcaa-tgacacttaacagttaagaatttcaaaattcttcattgttata 8049458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 24044998 - 24045161
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||| ||||||||||||  |||| |||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  24044998 aatgttttgaaggaattcaaataccttgaggtgaattccattgtttgggtaatagtttgaagaattttcaaaatgatggaaatttatgaagtattttgtt 24045097  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgt 229  Q
    |||||||||| || |||||||||||| ||  |||||| |||| |||||||||||||||||||||    
T  24045098 caagttaaatgtagagaatttcaaatgacacctaaaaattaaaaatttcaaaattcttcattgt 24045161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 40 - 259
Target Start/End: Original strand, 7079343 - 7079562
Alignment:
Q  40 tctctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaat 139  Q
    ||||||| ||||||||||||||  | ||||||| |||  |||  |||  |||||| || |||| |||||||||||||||||||||||||||||||||||     
T  7079343 tctctaaaagtgtgtttggatgaagcaatgtttcgagaaaatgtaaag-ttttgaggtaaatttcattgtttggataataatttaaagaattttcaaaac 7079441  T
Q  140 gatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaa-ttt 238  Q
    |||| ||||||| |||||||||| ||||||||||||||| |||||||||||| |   ||||||||||||||||||||||||||||||||||||||| |||    
T  7079442 gatgaaaatttaagaagtattttattcaagttaaatttagagaatttcaaatgatacctaaaagttaagaatttcaaaattcttcattgttataaatttt 7079541  T
Q  239 tcaaattttgcaatttggtcc 259  Q
    | |||||||||| ||| ||||    
T  7079542 taaaattttgcattttagtcc 7079562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 48 - 247
Target Start/End: Complemental strand, 24510340 - 24510141
Alignment:
Q  48 agtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaa 147  Q
    |||||||||||||| | |||||||||||||| ||| || |||||||| ||||| ||||||||||| |||||||||| ||||||||| |||||||||||||    
T  24510340 agtgtgtttggatgagagaatgttttgaggggatttaagtattttgaggtgaactccattgtttgaataataatttgaagaatttttaaaatgatggaaa 24510241  T
Q  148 tttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataa-attttcaaattt 246  Q
    |||||||||||||||||| |||||||||||| | | |||||||  ||  ||||||||||||||||| ||||||||||||||||| ||  |||||||||||    
T  24510240 tttatgaagtattttgttaaagttaaatttagaaactttcaaaagac-actaaaagttaagaattttaaaattcttcattgttagaattttttcaaattt 24510142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 97 - 259
Target Start/End: Complemental strand, 40734115 - 40733953
Alignment:
Q  97 tgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattactt 196  Q
    ||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||      
T  40734115 tgaattccattgttttgataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacac 40734016  T
Q  197 ctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||| ||||||||||||| ||||||||| || | | |||||| |||||||| ||||||||    
T  40734015 ctaaaagctaagaatttcaaatttcttcattattgttatttttcatattttgcattttggtcc 40733953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 66 - 259
Target Start/End: Original strand, 14276 - 14469
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||| |||||||||||||| ||||  ||||||| |||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||| |||||    
T  14276 aatgttttaagggaattcaaatactttggggtgaatttcattgtttagataataatttgaagtattttcaaaatgatggaaatttatgaagtatcttgtt 14375  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||||| |||||||||||| ||   |||||| ||||| ||| ||| |||||||||||| | | |||||| |||||||| ||||||||    
T  14376 caagttaaatttagagaatttcaaatgacacttaaaagctaagagttttaaatttcttcattgttgttatttttcatattttgcattttggtcc 14469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 102 - 259
Target Start/End: Original strand, 10593145 - 10593302
Alignment:
Q  102 tccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaa 201  Q
    |||||||||||||||||||||| ||||||||||||||||||  || |||||||| |||||||||||||||||||||| |||||||||||| ||  ||||     
T  10593145 tccattgtttggataataatttgaagaattttcaaaatgattaaactttatgaaatattttgttcaagttaaatttagagaatttcaaataacacctaag 10593244  T
Q  202 agttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    |||||||||||| |||||||||||||||||||| |||||||||||| || ||||||||    
T  10593245 agttaagaattttaaaattcttcattgttataatttttcaaattttacattttggtcc 10593302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 66 - 259
Target Start/End: Complemental strand, 28324707 - 28324514
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||| ||||||||||||  ||||  |||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||    
T  28324707 aatgttttgaaggaattcaaataccttgagctgaattacattgtttggataatagtttgaagaattttcaaaatgatggaaatttatgaggtattttgtt 28324608  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    |||||||||| ||  ||| ||||||| |   |||||||||||||||||||||||| |||||||| |||  |||||||||||| || ||||||||    
T  28324607 caagttaaatgtagggaaattcaaatgaaacctaaaagttaagaatttcaaaattattcattgtcatattttttcaaattttacattttggtcc 28324514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 70 - 257
Target Start/End: Complemental strand, 35404783 - 35404596
Alignment:
Q  70 ttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaag 169  Q
    |||||||| |||||||||| ||||| |||||||  | ||||||||||||||||  |||| |||| |||||||| ||||||||||||||||||||||||||    
T  35404783 ttttgaggaaattcaaatactttgaggtgaattttactgtttggataataattccaagagtttttaaaatgatagaaatttatgaagtattttgttcaag 35404684  T
Q  170 ttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggt 257  Q
    ||||||| |||||||| ||||| ||  ||||| ||||||||||||| ||||||||||| ||| ||||||| |||||||||| ||||||    
T  35404683 ttaaattcaaagaattacaaatgacacctaaaggttaagaatttcataattcttcattattaaaaatttttaaattttgcattttggt 35404596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 66 - 241
Target Start/End: Complemental strand, 15186862 - 15186687
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||||  |||||||||| ||| | |||||||| ||||||||| | |||||| |||||||||||||| |||||||||||||||||||||||||||    
T  15186862 aatgttttgagtaaattcaaatagtttaaggtgaattctattgtttgggtgataattaaaagaattttcaaattgatggaaatttatgaagtattttgtt 15186763  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttca 241  Q
    ||||||||||||| ||| ||| |||| ||  ||||||||||||||||| ||| || ||| ||||||||||||||||    
T  15186762 caagttaaatttagagatttttaaatgacacctaaaagttaagaattttaaattttttcgttgttataaattttca 15186687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 47 - 171
Target Start/End: Original strand, 34388527 - 34388650
Alignment:
Q  47 gagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaa 146  Q
    |||||||||||||||||||||||||||||| |  ||||||||||| || |||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  34388527 gagtgtgtttggatgggggaatgttttgagagggttcaaatattt-gaggtgaattccattgtttggataataatttaaagaacttttaaaatgatggaa 34388625  T
Q  147 atttatgaagtattttgttcaagtt 171  Q
    |||||||||||||||||||||||||    
T  34388626 atttatgaagtattttgttcaagtt 34388650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 66 - 259
Target Start/End: Complemental strand, 31976627 - 31976440
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||| ||||||| ||||||||||||||||  |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  31976627 aatgctttgaggaaattcaaatattttgagatgaatttcattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttatt 31976528  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||| ||||||||| ||||||| ||       ||||||| ||| ||||| |||  ||||||||||||||| || | |||||||||| ||||||||    
T  31976527 caaattaaatttagagaattttaa------cctaaaagctaaaaattttaaatatcttcattgttataatttgttaaattttgcattttggtcc 31976440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 68 - 258
Target Start/End: Complemental strand, 1088320 - 1088135
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    |||||||||| |||||||||||||||  || ||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||    
T  1088320 tgttttgaggaaattcaaatattttggggtaaattccattgtttggataataatttcaagcattttcaaaatgatagaaatttatgaagtattttgttca 1088221  T
Q  168 ag-ttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtc 258  Q
    || ||||||||| |||||||||||| ||  ||||||| ||||      ||| |||||||||||| | | |||||| |||||||| |||||||    
T  1088220 agtttaaatttagagaatttcaaatgacacctaaaagctaag------aaatttcttcattgttgttatttttcatattttgcattttggtc 1088135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 163
Target Start/End: Original strand, 44889392 - 44889489
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttg 163  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||| ||||||| |||||||||||||||||||    
T  44889392 aatgttttgagggaattcaaatactttgatgtgaattccattgtttggataataatttgtagaattttcataatgatgaaaatttatgaagtattttg 44889489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 66 - 259
Target Start/End: Original strand, 15718235 - 15718429
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||| || ||||||||||||||| | | ||| | |||| |||||||  |||||| |||| |||||||||||||| ||||||| |||| ||||||||    
T  15718235 aatgtttttagtgaattcaaatattttaaggcgaacttcattttttggatgttaatttgaagagttttcaaaatgatgaaaatttaggaaggattttgtt 15718334  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaatt-cttcattgttataaattttcaaattttgcaatttggtcc 259  Q
     |||||||||||| | |||||||||| |  |||||||| ||||||||||||| || |||||||||| |   ||||||||||||||| ||||||||    
T  15718335 taagttaaatttagataatttcaaatgatatctaaaagctaagaatttcaaacttccttcattgttttgttttttcaaattttgcattttggtcc 15718429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 35979041 - 35978942
Alignment:
Q  74 gagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaa 173  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||   ||| ||| |||||||||| ||||||||||||||||||||||||||||    
T  35979041 gagggaattcaaatactttgaggtgaattccattgtttggataataattt---gaaattttaaaatgatgggaatttatgaagtattttgttcaagttaa 35978945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 45 - 160
Target Start/End: Original strand, 8469514 - 8469629
Alignment:
Q  45 aagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatgg 144  Q
    ||||||||||||||| | ||||||||||||||||||||||| |  | | | ||||||||||||||||||||||||||||| | ||||||||||||||||     
T  8469514 aagagtgtgtttggacgagggaatgttttgagggaattcaagtcctattaggtgaattccattgtttggataataatttagataattttcaaaatgatga 8469613  T
Q  145 aaatttatgaagtatt 160  Q
    ||||| ||||||||||    
T  8469614 aaattcatgaagtatt 8469629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 227
Target Start/End: Complemental strand, 6460878 - 6460770
Alignment:
Q  119 aatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaa 218  Q
    ||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||| ||  || ||||||| ||||||||||     
T  6460878 aatttgaagaaatttcaaaatgatggaaatttatgaattattttgttcaagttaaatttaaataagttcaaatgacacctgaaagttaggaatttcaaac 6460779  T
Q  219 ttcttcatt 227  Q
    |||||||||    
T  6460778 ttcttcatt 6460770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 41 - 115
Target Start/End: Complemental strand, 30445003 - 30444929
Alignment:
Q  41 ctctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  30445003 ctctaagagtgtgtttggatggaggaatgttttgagggaattcaaatactttgaggtgaattccattgtttggat 30444929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 43167760 - 43167660
Alignment:
Q  77 ggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatt 176  Q
    |||||||||||| ||||| |||||||   |||||| ||||||||||| |||||||||||||||| || ||||||||||||||||||||| ||||||||||    
T  43167760 ggaattcaaatactttgaggtgaatttagttgtttagataataatttgaagaattttcaaaatgttgaaaatttatgaagtattttgtttaagttaaatt 43167661  T
Q  177 t 177  Q
    |    
T  43167660 t 43167660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 256
Target Start/End: Original strand, 7668746 - 7668867
Alignment:
Q  135 aaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataa 234  Q
    |||| |||||||||||||||| ||||||||| ||||| |||| | |||||||||||| ||   |||||| ||||||||| ||| ||||||||| ||||||    
T  7668746 aaaaagatggaaatttatgaaatattttgtttaagtttaattaagagaatttcaaatgacacttaaaaggtaagaattttaaatttcttcattcttataa 7668845  T
Q  235 attttcaaattttgcaatttgg 256  Q
    ||||||||||||| || |||||    
T  7668846 attttcaaattttacattttgg 7668867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 259
Target Start/End: Original strand, 44889776 - 44889837
Alignment:
Q  198 taaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||    
T  44889776 taaaagttaagaatttcaaaattcttcattgttataatttttcaaattttgctttttggtcc 44889837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 24063807 - 24063719
Alignment:
Q  100 attccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttca 188  Q
    |||||||||||||||| |||||||  | |||||||||||| ||| ||||||||| | ||||||||||| |||||||||| |||||||||    
T  24063807 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatgcaatattttgttcaggttaaatttagagaatttca 24063719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 224
Target Start/End: Complemental strand, 33423017 - 33422891
Alignment:
Q  99 aattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaa-tttcaaattacttc 197  Q
    |||| |||||||| ||| ||||||| || | |||| |||||| || ||||||||||| |||||||| ||| ||||||||| |||| |||||||| ||  |    
T  33423017 aatttcattgtttagatgataatttgaaaattttttaaaatggtgtaaatttatgaactattttgtccaaattaaatttagagaattttcaaatgacacc 33422918  T
Q  198 taaaagttaagaatttcaaaattcttc 224  Q
    |||||| |||||||| |||||||||||    
T  33422917 taaaagataagaattgcaaaattcttc 33422891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 133
Target Start/End: Complemental strand, 28190736 - 28190681
Alignment:
Q  78 gaattcaaatattttgatgtgaattccattgtttggataataatttaaagaatttt 133  Q
    ||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||    
T  28190736 gaattcaaatattttgaggtgaattcaattgtttggataataacttaaagaatttt 28190681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 14799976 - 14800024
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattt 91  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||    
T  14799976 ctaagagtgtgtttggatgggggaatgttttgagggaattaaactattt 14800024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 190
Target Start/End: Complemental strand, 28190652 - 28190593
Alignment:
Q  131 tttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaa 190  Q
    |||||||||||| |||||||||||| |||||||||||||||||||  | |||||||||||    
T  28190652 tttcaaaatgatagaaatttatgaaatattttgttcaagttaaatagagagaatttcaaa 28190593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 102
Target Start/End: Original strand, 7202863 - 7202921
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaatt 102  Q
    |||||||||||||||||||  ||||||||||||||||||||| || ||||| |||||||    
T  7202863 taagagtgtgtttggatggatgaatgttttgagggaattcaactactttgaggtgaatt 7202921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 33377383 - 33377345
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||||||||||||||||||||||||    
T  33377383 ctaagagtgtgtttggatgggggaatgttttgagggaat 33377345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 94
Target Start/End: Original strand, 42739947 - 42739997
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaattcaaatattttga 94  Q
    ||||||||||||||||||| |||||||||||||||||||||| || |||||    
T  42739947 taagagtgtgtttggatggaggaatgttttgagggaattcaactactttga 42739997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 115
Target Start/End: Original strand, 23011772 - 23011821
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    |||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  23011772 aatgttatgagggaattcaaatactttgaggtgaattccattgtttggat 23011821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 30435385 - 30435340
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaatattt 91  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||    
T  30435385 agagtgtgtttggatggggaaatgttttgagggaattcaactattt 30435340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 7202974 - 7202930
Alignment:
Q  41 ctctaagagtgtgtttggatgggggaatgttttgagggaattcaa 85  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||    
T  7202974 ctcttagagtgtgtttggatggaggaatgttttgagggaattcaa 7202930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 10795041 - 10794993
Alignment:
Q  144 gaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatt 192  Q
    ||||||||| ||||||||||| ||||||||||||| |||||||||||||    
T  10795041 gaaatttataaagtattttgtacaagttaaatttagagaatttcaaatt 10794993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 32626126 - 32626082
Alignment:
Q  37 atttctctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||    
T  32626126 atttctctaagagtgtgcttggatgggggaatcttttgagggaat 32626082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 81
Target Start/End: Original strand, 3853616 - 3853651
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||||    
T  3853616 agagtgtgtttggatgggggaatgttttgagggaat 3853651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 81
Target Start/End: Original strand, 3858074 - 3858109
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||||    
T  3858074 agagtgtgtttggatgggggaatgttttgagggaat 3858109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 21465645 - 21465569
Alignment:
Q  44 taagagtgtgtttggatgggggaatgt---ttt--gagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    |||||||||||||||||| ||||||||   |||  ||||||||||||||| ||||| || |||||||||||||||||    
T  21465645 taagagtgtgtttggatgagggaatgtaattttacgagggaattcaaatactttgaggttaattccattgtttggat 21465569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 216 - 259
Target Start/End: Complemental strand, 26520797 - 26520754
Alignment:
Q  216 aaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    |||||||||||||||||||||||| ||| |||||||||||||||    
T  26520797 aaattcttcattgttataaattttgaaaatttgcaatttggtcc 26520754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 29257434 - 29257399
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||||    
T  29257434 agagtgtgtttggatgggggaatgttttgagggaat 29257399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 17110866 - 17110904
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  17110866 ctaagagtgtgtttggatggggaaatgttttgagggaat 17110904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 36103098 - 36103136
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  36103098 ctaagagtgtgtttggatggaggaatgttttgagggaat 36103136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 515577 - 515528
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    |||||||| ||||| |||||||| ||||||||||||| ||||||||||||    
T  515577 aatgttttaagggagttcaaatactttgatgtgaatttcattgtttggat 515528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 77
Target Start/End: Original strand, 14991690 - 14991723
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagg 77  Q
    ||||||||||||||||||||||||||||||||||    
T  14991690 taagagtgtgtttggatgggggaatgttttgagg 14991723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 27322734 - 27322697
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||||| |||||||||||||||||    
T  27322734 taagagtgtgtttggatgggagaatgttttgagggaat 27322697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 115
Target Start/End: Original strand, 36103139 - 36103188
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    |||||||| ||| |||||||||| ||||||||||||| ||||||||||||    
T  36103139 aatgttttaaggaaattcaaatactttgatgtgaattgcattgtttggat 36103188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 42711441 - 42711404
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  42711441 taagagtgtgtttggattggggaatgttttgagggaat 42711404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 42740068 - 42740015
Alignment:
Q  50 tgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattc 103  Q
    ||||||||||||||| ||| |||||||||||||||| |||||||| ||| ||||    
T  42740068 tgtgtttggatggggaaatattttgagggaattcaattattttgaggtggattc 42740015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 259
Target Start/End: Original strand, 8469679 - 8469731
Alignment:
Q  207 agaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||| |||| |||| |||||||||||||||||||||| ||| ||||    
T  8469679 agaatttcaaatttctccattcttataaattttcaaattttgcattttagtcc 8469731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 259
Target Start/End: Complemental strand, 28190603 - 28190552
Alignment:
Q  207 agaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    |||||||||||||||||||||| ||||| |||||||| |||||| ||||||||    
T  28190603 agaatttcaaaattcttcattgctataatttttcaaa-tttgcattttggtcc 28190552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 80
Target Start/End: Complemental strand, 29482888 - 29482856
Alignment:
Q  48 agtgtgtttggatgggggaatgttttgagggaa 80  Q
    |||||||||||||||||||||||||||||||||    
T  29482888 agtgtgtttggatgggggaatgttttgagggaa 29482856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 42711304 - 42711352
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaatattttga 94  Q
    ||||||||||||||||||| |||||||||||| ||||||| || |||||    
T  42711304 agagtgtgtttggatggggaaatgttttgaggaaattcaactactttga 42711352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 81
Target Start/End: Original strand, 33902667 - 33902702
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||| ||||||||||||||||||    
T  33902667 agagtgtgtttggatggaggaatgttttgagggaat 33902702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 81
Target Start/End: Complemental strand, 44346757 - 44346726
Alignment:
Q  50 tgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||    
T  44346757 tgtgtttggatgggggaatgttttgagggaat 44346726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 84
Target Start/End: Complemental strand, 8409982 - 8409944
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattca 84  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  8409982 agagtgtgtttggatggaggaatgttttaagggaattca 8409944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 80
Target Start/End: Complemental strand, 14800119 - 14800085
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaa 80  Q
    ||||||||||||||||||||||| |||||||||||    
T  14800119 agagtgtgtttggatgggggaatattttgagggaa 14800085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 38573544 - 38573470
Alignment:
Q  43 ctaagagtgtgtttggatgggggaa-----tgttttgagggaattcaaatattttgatgtgaattccattgtttg 112  Q
    |||||||||||||||||||||||||     |||||||||| ||||||| || |||||  ||||||| ||||||||    
T  38573544 ctaagagtgtgtttggatgggggaatgtagtgttttgaggaaattcaactactttgagttgaattctattgtttg 38573470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 40046801 - 40046839
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  40046801 ctaagagtgtgtttggatggatgaatgttttgagggaat 40046839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 23011732 - 23011769
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||| ||| |||||||||||||||||    
T  23011732 taagagtgtgtttggacgggagaatgttttgagggaat 23011769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 215 - 248
Target Start/End: Complemental strand, 43167656 - 43167623
Alignment:
Q  215 aaaattcttcattgttataaattttcaaattttg 248  Q
    |||||||||||||||||||| |||||||||||||    
T  43167656 aaaattcttcattgttataatttttcaaattttg 43167623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 81
Target Start/End: Complemental strand, 35979084 - 35979052
Alignment:
Q  49 gtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||| ||||||||||||||||||    
T  35979084 gtgtgtttggatggaggaatgttttgagggaat 35979052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 170; Significance: 3e-91; HSPs: 92)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 46 - 259
Target Start/End: Original strand, 33146191 - 33146404
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatgga 145  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33146191 agagtgtgtttggatgggggaatgttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttaaagaattttcaaaatgatgga 33146290  T
Q  146 aatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaatt 245  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||   ||||||||||||||||||||||||||||||||||||  |||||||| |    
T  33146291 aatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacataaaagttaagaatttcaaaattcttcattgttatattttttcaaaat 33146390  T
Q  246 ttgcaatttggtcc 259  Q
    ||||| ||||||||    
T  33146391 ttgcattttggtcc 33146404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 54 - 259
Target Start/End: Complemental strand, 17542405 - 17542200
Alignment:
Q  54 tttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatg 153  Q
    |||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  17542405 tttggatgggagaatgttttgagggaattcaaatactttgaggtgaattccattgtttgaataataatttaaagaatttttaaaatgatggaaatttatg 17542306  T
Q  154 aagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatt 253  Q
    |||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||    
T  17542305 aagtattttgttcaagttgaatttagagaatttcaaatgacatctaaaagttaagaatttcaaaattcttcattgttatattttttcaaattttgcattt 17542206  T
Q  254 tggtcc 259  Q
    ||||||    
T  17542205 tggtcc 17542200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 44 - 259
Target Start/End: Complemental strand, 15270908 - 15270693
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatg 143  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||  ||||| ||||||||||||    
T  15270908 taagagtgtgtttggatggaggaatgttttgagggaattcaaatactttgaggtgaattccattgtttgaataataatttgtagaatattcaaaatgatg 15270809  T
Q  144 gaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaa 243  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||| ||  |||||||||||||||||||||| ||||||  ||||||||||||||||    
T  15270808 gaaatttatgaagtattttattcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaactcttcaaagttataaattttcaaa 15270709  T
Q  244 ttttgcaatttggtcc 259  Q
    ||||||| ||||||||    
T  15270708 ttttgcattttggtcc 15270693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 44 - 259
Target Start/End: Original strand, 28489479 - 28489694
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatg 143  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||| |||||||||    
T  28489479 taagattgtgtttggatgggggaatattttgagagaattcaaatactttgaggtgaattccattgtttcgataataatttaaagaatttttaaaatgatg 28489578  T
Q  144 gaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaa 243  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||| || |||||||||||| |||||||||||||||||||||||||  ||||||||    
T  28489579 gaaatttatgaagtagtttgttcaagttaaatttagagaatttcaaatgacatctaaaagttaataatttcaaaattcttcattgttatattttttcaaa 28489678  T
Q  244 ttttgcaatttggtcc 259  Q
    ||||||| ||| ||||    
T  28489679 ttttgcattttagtcc 28489694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 70 - 259
Target Start/End: Original strand, 10314691 - 10314880
Alignment:
Q  70 ttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaag 169  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||    
T  10314691 ttttaagggaattcaaatattttgatgtgaattctattgtttggataataatttgaagaattttcaaaatgatgaaaatttatgaagtattttgtttaag 10314790  T
Q  170 ttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    |||||||||||||||||||||| ||  ||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||    
T  10314791 ttaaatttaaagaatttcaaatgacacctaaaagttaagaatttaaaaattcttcgttgttataaattttcaaattttacaatttggtcc 10314880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 46 - 259
Target Start/End: Original strand, 34105089 - 34105302
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatgga 145  Q
    ||||||||||||||||| |||||||||||||  |||||||||| |||||  |||||| |||||||||||||||||||| |||||||||||||||||| ||    
T  34105089 agagtgtgtttggatggaggaatgttttgagaaaattcaaatactttgagatgaatttcattgtttggataataatttgaagaattttcaaaatgataga 34105188  T
Q  146 aatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaatt 245  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||| ||  |||||||||||||||||||||||||||| ||||||||| ||| ||||||    
T  34105189 aatttacgaagtattttgtttaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttctttgttataattttccaaatt 34105288  T
Q  246 ttgcaatttggtcc 259  Q
    ||||| ||||||||    
T  34105289 ttgcattttggtcc 34105302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 46 - 259
Target Start/End: Original strand, 35111240 - 35111457
Alignment:
Q  46 agagtgtgtttggatggggga----atgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatga 141  Q
    ||||||||||||||||||| |    ||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||| ||||| |||||||||||    
T  35111240 agagtgtgtttggatggggaatgtaatgttttgaaggaattcaaatattttgatgtgagttctattgtttggataataatttgaagaactttcaaaatga 35111339  T
Q  142 tggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttca 241  Q
    || ||||||||||||||||||||| ||||||||||||||||||||||||| ||  ||||||||||||||||||||||   ||||||||||||||||||||    
T  35111340 tgaaaatttatgaagtattttgtttaagttaaatttaaagaatttcaaatgacacctaaaagttaagaatttcaaaaaatttcattgttataaattttca 35111439  T
Q  242 aattttgcaatttggtcc 259  Q
    || |||| ||||||||||    
T  35111440 aaatttgaaatttggtcc 35111457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 66 - 259
Target Start/End: Complemental strand, 32250130 - 32249937
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||||||||||||||||  ||||  ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||    
T  32250130 aatgttttgagggaattcaaataccttgagatgaattccattgtttggataataatttaaagaatttttaaaatgatggtaatttatgaagtattttatt 32250031  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||||||||||||| |||| ||  |||||||||| ||||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  32250030 caagttaaatttaaagaattttaaatgacacctaaaagttatgaatttcaaaattcttcattgttatattttttcaaattttgcattttggtcc 32249937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 75 - 259
Target Start/End: Complemental strand, 9894345 - 9894161
Alignment:
Q  75 agggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaa 174  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9894345 agggaattcaaatactttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatgggaatttatgaagtattttgttcaagttaaa 9894246  T
Q  175 tttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    || | |||| ||||||| ||  ||||||| ||||||||||||||||||||||||||||||  |||||||||||||| ||||||||    
T  9894245 ttcagagaaattcaaatgacacctaaaaggtaagaatttcaaaattcttcattgttataatctttcaaattttgcattttggtcc 9894161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 66 - 259
Target Start/End: Complemental strand, 22303902 - 22303709
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||| ||||||||||||  |||| ||||||| |||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  22303902 aatgttttgaaggaattcaaataccttgaggtgaatttcattgtttgggtaatagtttgaagaattttcaaaatgatggaaatttatgaagtattttgtt 22303803  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    |||||||||| || |||||||||||| ||  ||||||||||||||||||||||||||||||||| |||  |||||||||||| || ||||||||    
T  22303802 caagttaaatgtagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgtcatattttttcaaattttacattttggtcc 22303709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 68 - 259
Target Start/End: Original strand, 927342 - 927532
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||    
T  927342 tgttttgagggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaat-atggaaatttatgaagtattttgttca 927440  T
Q  168 agttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||| || ||||||||| ||  ||||||| ||||||||||||| |||||||||||| | | |||||| |||||||| ||||||||    
T  927441 agttaaatttagaggatttcaaatgacacctaaaagctaagaatttcaaatttcttcattgttgttatttttcatattttgcattttggtcc 927532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 116 - 259
Target Start/End: Complemental strand, 40089799 - 40089656
Alignment:
Q  116 aataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttca 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||  |||||||||||||||||||    
T  40089799 aataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttca 40089700  T
Q  216 aaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||    
T  40089699 aaattcttcattgttatattttttcaaattttgcattttggtcc 40089656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 68 - 230
Target Start/End: Complemental strand, 41762245 - 41762083
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    |||||| |||||||||||||| ||||  |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  41762245 tgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttca 41762146  T
Q  168 agttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgtt 230  Q
    ||||||||||| |||||||||||| ||  ||||||| ||||||||||||| ||||||||||||    
T  41762145 agttaaatttagagaatttcaaataacacctaaaagctaagaatttcaaatttcttcattgtt 41762083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 69 - 248
Target Start/End: Original strand, 12479948 - 12480127
Alignment:
Q  69 gttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaa 168  Q
    ||||||||| |||||||||| ||||| ||||||| |||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  12479948 gttttgaggaaattcaaatactttgaggtgaatttcattgtttagataataatttgaagaattttcaaaatgatggaaattcatgaagtattttgttcaa 12480047  T
Q  169 gttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttg 248  Q
    |  ||||||| ||||||| |||| ||  ||||||| ||||||||||||||||||| |||||||||| |||||||||||||    
T  12480048 gacaaatttagagaatttgaaatgacacctaaaagctaagaatttcaaaattcttgattgttataatttttcaaattttg 12480127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 39 - 178
Target Start/End: Original strand, 22305105 - 22305244
Alignment:
Q  39 ttctctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaa 138  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||  |||||||||||||    
T  22305105 ttctctaagagtgtgtttggatgggggaatgttttgagggaattcaactactttgaggtgaattccattgtttggataataatttgtagaattttcaaaa 22305204  T
Q  139 tgatggaaatttatgaagtattttgttcaagttaaattta 178  Q
    ||| |||||||||||||||||||| |||||||||||||||    
T  22305205 tgaaggaaatttatgaagtattttattcaagttaaattta 22305244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 66 - 256
Target Start/End: Original strand, 35379381 - 35379570
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    ||||||||||||||||||||||  ||||| |||||||  |||| |||||| ||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  35379381 aatgttttgagggaattcaaattctttgaagtgaattttattgattggatgataatttgaaga-ttttcaaaatggtggaaatttatgaagtattttgtt 35379479  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttgg 256  Q
    ||||||||||||| |||||||||||| ||  ||||||||||| ||||||| | |||||||||||||||| |||||||| |||||| |||||    
T  35379480 caagttaaatttagagaatttcaaatgacacctaaaagttaataatttcacatttcttcattgttataagttttcaaaatttgcattttgg 35379570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 105 - 259
Target Start/End: Original strand, 8264585 - 8264739
Alignment:
Q  105 attgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagt 204  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||| ||  ||||||||    
T  8264585 attgtttagataataatttgaagaatttccaaaatgatggaaatttatgaagtattttattcaagttaaatttagagaattttaaatgacacctaaaagt 8264684  T
Q  205 taagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    |||||||||||||||||||||||||||||  ||| ||||||||||| ||||||||    
T  8264685 taagaatttcaaaattcttcattgttatagttttccaaattttgcattttggtcc 8264739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 45 - 197
Target Start/End: Complemental strand, 37241162 - 37241012
Alignment:
Q  45 aagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatgg 144  Q
    |||| |||||||||||| || |||||||| |||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  37241162 aagaatgtgtttggatgtgg-aatgttttcagggaattgaaatactttgaggtgaattccattgtttggataataatttgaagaatttttaaaatgatgg 37241064  T
Q  145 aaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttc 197  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||| ||||    
T  37241063 aaatttatgaagta-tttgttgaagttaaatttaaagaatttcaaatttcttc 37241012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 48 - 259
Target Start/End: Complemental strand, 6772260 - 6772052
Alignment:
Q  48 agtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaa 147  Q
    ||||||||||||||||  |||||| |||||||||| ||||| |  || ||||||| |||||||||||| ||||||| || |||| |||||| ||||||||    
T  6772260 agtgtgtttggatgggt-aatgttatgagggaatttaaatact--gaggtgaatttcattgtttggatgataatttgaataattatcaaaacgatggaaa 6772164  T
Q  148 tttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaatttt 247  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||   |||||| ||||||||||||| ||||| | | ||| || ||||||| ||||    
T  6772163 tttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacgtaaaagctaagaatttcaaatttcttaaatattaaaatttttcaattttt 6772064  T
Q  248 gcaatttggtcc 259  Q
    ||| ||||||||    
T  6772063 gcattttggtcc 6772052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 66 - 247
Target Start/End: Complemental strand, 17493197 - 17493016
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    ||||||| |||| ||||||||||| |  |  ||||||||||||||||||| |||||||  ||||||||||||||||||||||||||| ||||||||| ||    
T  17493197 aatgtttggaggaaattcaaatatatctagatgaattccattgtttggatgataatttggagaattttcaaaatgatggaaatttataaagtattttttt 17493098  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaatttt 247  Q
     ||||||||||||||||||||||||| ||  | ||||| |||||||||||||  |||||||| |||||| || | |||||||    
T  17493097 aaagttaaatttaaagaatttcaaatgacaccgaaaagctaagaatttcaaatatcttcattcttataatttattaaatttt 17493016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 30519042 - 30519166
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||| |||||||||||||||||||||  |||||||  || |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  30519042 aatgttatgagggaattcaaatattttgcggtgaattttat-gtttggataataatttgaagaattttcaaaatgatgggaatttatgaagtattttgtt 30519140  T
Q  166 caagttaaatttaaagaatttcaaat 191  Q
    |||||| |||||||||||||||||||    
T  30519141 caagttcaatttaaagaatttcaaat 30519166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 30559382 - 30559506
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||| |||||||||||||||||||||  |||||||  || |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  30559382 aatgttatgagggaattcaaatattttgcggtgaattttat-gtttggataataatttgaagaattttcaaaatgatgggaatttatgaagtattttgtt 30559480  T
Q  166 caagttaaatttaaagaatttcaaat 191  Q
    |||||| |||||||||||||||||||    
T  30559481 caagttcaatttaaagaatttcaaat 30559506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 66 - 190
Target Start/End: Complemental strand, 37241634 - 37241506
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaatt---ccatt-gtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattt 161  Q
    ||||||||||||||||||||||| |||||  ||||||   | ||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  37241634 aatgttttgagggaattcaaatactttgagctgaattgatctatttgtttggataatattttgaagaattttcaaaatgatggaaatttatgaagtattt 37241535  T
Q  162 tgttcaagttaaatttaaagaatttcaaa 190  Q
    |||||||||||||||||||||||||||||    
T  37241534 tgttcaagttaaatttaaagaatttcaaa 37241506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 66 - 186
Target Start/End: Original strand, 14834862 - 14834982
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||| ||||||| |||||| ||||| ||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||    
T  14834862 aatgttttaagggaatccaaatactttgaggtgaatttcattgtttggataataatttgaagaattttcaaaatgatgaaaatttatgaagtattttttt 14834961  T
Q  166 caagttaaatttaaagaattt 186  Q
    |||| |||||||| |||||||    
T  14834962 caagctaaatttagagaattt 14834982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 147 - 259
Target Start/End: Original strand, 22768186 - 22768298
Alignment:
Q  147 atttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattt 246  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| ||  |||||||||||||||||||||||||||||||||||||  |||||||||||    
T  22768186 atttatgaagtattttgttcaagttgaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgttatattttttcaaattt 22768285  T
Q  247 tgcaatttggtcc 259  Q
    |||| ||||||||    
T  22768286 tgcattttggtcc 22768298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 48 - 151
Target Start/End: Original strand, 28490013 - 28490115
Alignment:
Q  48 agtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaa 147  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  28490013 agtgtgtttggatggggga-tgttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttgaggaattttcaaaatgatggaaa 28490111  T
Q  148 ttta 151  Q
    ||||    
T  28490112 ttta 28490115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 46 - 162
Target Start/End: Original strand, 22302539 - 22302656
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgt-gaattccattgtttggataataatttaaagaattttcaaaatgatgg 144  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||  | |  |||||||||||||||||||||||||| |||| |||||||||||||||    
T  22302539 agagtgtgtttggatggggtaatgttttgagggaattcaaatacttaaaaggcgaattccattgtttggataataatttgaagatttttcaaaatgatgg 22302638  T
Q  145 aaatttatgaagtatttt 162  Q
    ||||||||||||||||||    
T  22302639 aaatttatgaagtatttt 22302656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 66 - 259
Target Start/End: Complemental strand, 8674508 - 8674317
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||| ||  ||||||| || ||| | ||||||||||||||||||||||||| |  | |||||| |||||| ||| ||||||||||| |||||||||    
T  8674508 aatgttttaagaaaattcaattaattttaagtgaattccattgtttggataataaatgga-gaatttccaaaattatgaaaatttatgaa-tattttgtt 8674411  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||||| |||||||||||| ||   |||||  ||||||||| ||| || |||||| |||||| ||||||||||||||| ||||||||    
T  8674410 caagttaaatttagagaatttcaaatgacacataaaaactaagaattttaaatttattcattcttataatttttcaaattttgcattttggtcc 8674317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 67 - 164
Target Start/End: Complemental strand, 17492679 - 17492582
Alignment:
Q  67 atgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgt 164  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||| ||||||||||||    
T  17492679 atgttttgagggaattcaaataatttgaggtgaattccattgtttggatgataatttgaagaattttcaaaatgatgaaaatttaagaagtattttgt 17492582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 66 - 217
Target Start/End: Original strand, 11601077 - 11601226
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||| |||||||||||| ||||| |||||||  ||| ||||||| ||||||| |||||||||||||||  ||| ||||| ||||||||||||||    
T  11601077 aatgttttgaaggaattcaaataatttgaggtgaattttattatttggatgataatttgaagaattttcaaaattgtgg-aatttctgaagtattttgtt 11601175  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaa 217  Q
    ||||||||||||| | ||||| |||||||  ||||||| |||||||||||||    
T  11601176 caagttaaatttagacaattt-aaattacacctaaaagctaagaatttcaaa 11601226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 197
Target Start/End: Original strand, 31316205 - 31316330
Alignment:
Q  72 ttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagtt 171  Q
    ||||||||||||||| | |||||  ||||||| ||| ||||||| ||||||| |||||||||  ||||||||||||||||||||| |||||||| |||||    
T  31316205 ttgagggaattcaaacactttgagatgaattctattatttggatgataatttgaagaattttttaaatgatggaaatttatgaagcattttgtttaagtt 31316304  T
Q  172 aaatttaaagaatttcaaattacttc 197  Q
    ||||||| ||||||||||||| ||||    
T  31316305 aaatttagagaatttcaaatttcttc 31316330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 157
Target Start/End: Original strand, 22766990 - 22767081
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagt 157  Q
    ||||||||||||||||||||||| ||| | |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  22766990 aatgttttgagggaattcaaatactttaaggtgaattctattgtttggataataatttaaagaattttcagaatgatggaaatttacgaagt 22767081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 71 - 192
Target Start/End: Complemental strand, 17444456 - 17444336
Alignment:
Q  71 tttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaatttt-caaaatgatggaaatttatgaagtattttgttcaag 169  Q
    |||||||||||| |||||||| |  || ||||| |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||   ||    
T  17444456 tttgagggaatttaaatatttag--gtaaattctattgtttggataatgatttagagaatttttcaaaatgatggaaatttatgaagtattttgtctgag 17444359  T
Q  170 ttaaatttaaagaatttcaaatt 192  Q
    ||||||||| |||||||||||||    
T  17444358 ttaaatttagagaatttcaaatt 17444336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 11409279 - 11409370
Alignment:
Q  126 agaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaa 217  Q
    |||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||   |||||| |||||||||||||    
T  11409279 agaatttttaaaatgatggaaatttgtgaagtattttgtccaagttaaatttaaagaatttcaaatgacacttaaaagctaagaatttcaaa 11409370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 135 - 259
Target Start/End: Original strand, 37090722 - 37090846
Alignment:
Q  135 aaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataa 234  Q
    |||||||||||| ||||||||||||||| ||||||||||||||| ||||||| |||  ||  |||||| |||  ||||||||| ||||||||| |||| |    
T  37090722 aaaatgatggaattttatgaagtattttattcaagttaaatttatagaattttaaaccacacctaaaaattagaaatttcaaatttcttcattattatga 37090821  T
Q  235 attttcaaattttgcaatttggtcc 259  Q
     |||||||||||| || ||||||||    
T  37090822 tttttcaaattttacattttggtcc 37090846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 9894127 - 9894060
Alignment:
Q  123 taaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaa 190  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||    
T  9894127 taaagaattttcaaaatgatgggaatttatgaagtattttgttcaagttaaatttatagaaattcaaa 9894060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 131
Target Start/End: Complemental strand, 40090446 - 40090381
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaatt 131  Q
    |||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  40090446 aatgttttgatggaattcaaatactttgaggtgaattccattgtttggataataatttaaagaatt 40090381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 115
Target Start/End: Complemental strand, 12064519 - 12064451
Alignment:
Q  47 gagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    |||||||||| ||||||||||||||||||||||||| ||||| ||||| ||||||| ||||||||||||    
T  12064519 gagtgtgttttgatgggggaatgttttgagggaatttaaatactttgaggtgaatttcattgtttggat 12064451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 2550325 - 2550384
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaatt 102  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||    
T  2550325 ctaagagtgtgtttggatgggggaatgttttgagggaattcaactactttgaggtgaatt 2550384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 37090320 - 37090395
Alignment:
Q  67 atgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgat 142  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||   |  |||||||||||||||||    
T  37090320 atgttttgaggaaattcaaatatttttatgtgaattccattgtttggataatagcatggagaattttcaaaatgat 37090395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 8255065 - 8255130
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattt 132  Q
    ||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||| |||||||    
T  8255065 aatgttttgagggaattcaaatatttt-aggtgaatttcattgtttggataataatttagagaattt 8255130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 72 - 197
Target Start/End: Original strand, 31367932 - 31368058
Alignment:
Q  72 ttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttca-aaatgatggaaatttatgaagtattttgttcaagt 170  Q
    ||||||||||||||| | |||||  ||||||| ||||||||||| ||||||| |    ||||   |||||||||||||| |||||| |||||||| ||||    
T  31367932 ttgagggaattcaaacactttgagatgaattctattgtttggatgataatttgatttttttttttaaatgatggaaattaatgaagcattttgtttaagt 31368031  T
Q  171 taaatttaaagaatttcaaattacttc 197  Q
    |||||||| ||||||||||||| ||||    
T  31368032 taaatttagagaatttcaaatttcttc 31368058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 28490109 - 28490196
Alignment:
Q  172 aaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||| || ||||||||| ||  ||||||||||||||||||||||| ||| |||||||||| |||||||| |||||| | ||||||    
T  28490109 aaatttagaggatttcaaatgacacctaaaagttaagaatttcaaaatgctttattgttataatttttcaaagtttgcattctggtcc 28490196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 33146061 - 33146103
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaata 88  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  33146061 agagtgtgtttggatgggggaatgttttgagggaattcaaata 33146103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 37722926 - 37722877
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  37722926 aatgttttgagggaattcaaatactttgaggtgaattccattgtttggat 37722877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 191
Target Start/End: Complemental strand, 21541562 - 21541478
Alignment:
Q  107 tgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaat 191  Q
    ||||| ||| |||| || ||||| ||| |||||||| ||||| |||||| |||||||| ||||||||||||| ||||||||||||    
T  21541562 tgttttgatgataactttaagaaattttaaaatgattgaaatctatgaattattttgtacaagttaaatttagagaatttcaaat 21541478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 25935364 - 25935325
Alignment:
Q  42 tctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25935364 tctaagagtgtgtttggatgggggaatgttttgagggaat 25935325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 40643979 - 40643941
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40643979 ctaagagtgtgtttggatgggggaatgttttgagggaat 40643941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 41762288 - 41762250
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||||||||||||||||||||||||    
T  41762288 ctaagagtgtgtttggatgggggaatgttttgagggaat 41762250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 2316376 - 2316413
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2316376 taagagtgtgtttggatgggggaatgttttgagggaat 2316413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 15374121 - 15374084
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15374121 taagagtgtgtttggatgggggaatgttttgagggaat 15374084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 206 - 259
Target Start/End: Complemental strand, 37241030 - 37240977
Alignment:
Q  206 aagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    |||||||||||| |||||||||||||||| |||||| |||||||| ||||||||    
T  37241030 aagaatttcaaatttcttcattgttataatttttcacattttgcattttggtcc 37240977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 259
Target Start/End: Complemental strand, 9894070 - 9894018
Alignment:
Q  207 agaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    |||| |||||||||||||||||||||||  |||||||||||||| ||||||||    
T  9894070 agaaattcaaaattcttcattgttataatctttcaaattttgcattttggtcc 9894018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 259
Target Start/End: Complemental strand, 22305108 - 22305056
Alignment:
Q  207 agaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    |||||||||| ||||||||||||||||  ||||||||||||||| ||||||||    
T  22305108 agaatttcaacattcttcattgttatattttttcaaattttgcattttggtcc 22305056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 81
Target Start/End: Original strand, 15804322 - 15804357
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||||    
T  15804322 agagtgtgtttggatgggggaatgttttgagggaat 15804357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 22303940 - 22303905
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||||    
T  22303940 agagtgtgtttggatgggggaatgttttgagggaat 22303905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 34982348 - 34982309
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaa 85  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  34982348 agagtgtgtttggatggaggaatgttttgagggaattcaa 34982309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 77
Target Start/End: Complemental strand, 40090488 - 40090453
Alignment:
Q  42 tctaagagtgtgtttggatgggggaatgttttgagg 77  Q
    ||||||||||||||||||||||||||||||||||||    
T  40090488 tctaagagtgtgtttggatgggggaatgttttgagg 40090453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 259
Target Start/End: Complemental strand, 6955463 - 6955323
Alignment:
Q  120 atttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaat 219  Q
    |||| ||||||||| ||||||||| || ||||| ||| ||||  || |||||||||||| |||||||||||| ||  | ||||| |||||| |||||| |    
T  6955463 atttgaagaatttttaaaatgatg-aagtttataaagaatttaatttaagttaaatttagagaatttcaaatgacaccaaaaagctaagaaattcaaatt 6955365  T
Q  220 tcttcattgttataa--attttcaaattttgcaatttggtcc 259  Q
     |||||||  |||||   |||| |||||||||| ||||||||    
T  6955364 ccttcattaatataatttttttgaaattttgcattttggtcc 6955323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 34982213 - 34982251
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  34982213 ctaagagtgtgtttggataggggaatgttttgagggaat 34982251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 2721628 - 2721595
Alignment:
Q  48 agtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||    
T  2721628 agtgtgtttggatgggggaatgttttgagggaat 2721595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 9764335 - 9764372
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaa 80  Q
    |||||||||||||||||||||||||| |||||||||||    
T  9764335 ctaagagtgtgtttggatgggggaatattttgagggaa 9764372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 14834976 - 14835017
Alignment:
Q  207 agaatttcaaaattcttcattgttataaattttcaaattttg 248  Q
    ||||||| |||||||||||||||||||| |||||||||||||    
T  14834976 agaattttaaaattcttcattgttataatttttcaaattttg 14835017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 19533939 - 19533890
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    |||||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  19533939 aatgttatgagggaattcaaatactttgaggtgaatttcattgtttggat 19533890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 115
Target Start/End: Complemental strand, 20320676 - 20320631
Alignment:
Q  70 ttttgagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    |||| |||||||||||||| |||| |||||||||||||||||||||    
T  20320676 ttttaagggaattcaaatactttggtgtgaattccattgtttggat 20320631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 25935322 - 25935273
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    |||||| ||||| |||||||||| ||||| ||||||||||||||||||||    
T  25935322 aatgttatgaggaaattcaaatactttgaggtgaattccattgtttggat 25935273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 28828369 - 28828402
Alignment:
Q  48 agtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||    
T  28828369 agtgtgtttggatgggggaatgttttgagggaat 28828402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 22302654 - 22302702
Alignment:
Q  211 tttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    |||||||||||||| ||||||||| ||||||||||||||| | ||||||    
T  22302654 tttcaaaattcttcgttgttataatttttcaaattttgcattatggtcc 22302702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 9764497 - 9764462
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||| ||||||||    
T  9764497 agagtgtgtttggatgggggaatgtttcgagggaat 9764462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 81
Target Start/End: Complemental strand, 9894388 - 9894357
Alignment:
Q  50 tgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||    
T  9894388 tgtgtttggatgggggaatgttttgagggaat 9894357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 12991374 - 12991276
Alignment:
Q  54 tttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatg 153  Q
    |||||||| ||||||||||||||| ||   || | |||||| |||||||| ||||||||||||||||||| ||   |||| ||||| ||| |||||||||    
T  12991374 tttggatgagggaatgttttgaggtaaagtaa-tgttttgaggtgaattctattgtttggataataatttgaaatttttttaaaataatgaaaatttatg 12991276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 81
Target Start/End: Original strand, 20523133 - 20523168
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||| |||||||||||||||||    
T  20523133 agagtgtgtttggatgggagaatgttttgagggaat 20523168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 75
Target Start/End: Complemental strand, 23092123 - 23092092
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttga 75  Q
    ||||||||||||||||||||||||||||||||    
T  23092123 taagagtgtgtttggatgggggaatgttttga 23092092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 26281339 - 26281304
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||||||| |||||||||||||    
T  26281339 agagtgtgtttggatgggggaacgttttgagggaat 26281304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 37722964 - 37722929
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||| ||||||||||||    
T  37722964 agagtgtgtttggatgggggaatattttgagggaat 37722929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 81
Target Start/End: Original strand, 3563278 - 3563312
Alignment:
Q  47 gagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||| ||||||||||||||||||||    
T  3563278 gagtgtgtttggataggggaatgttttgagggaat 3563312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 5658773 - 5658811
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  5658773 ctaagagtgtgtttggatggagaaatgttttgagggaat 5658811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 247
Target Start/End: Complemental strand, 13064897 - 13064831
Alignment:
Q  181 gaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaatttt 247  Q
    ||||||||||||||  ||||| | ||  ||||||||| ||||||| |||||||| ||||||||||||    
T  13064897 gaatttcaaattacacctaaatgctataaatttcaaatttcttcagtgttataatttttcaaatttt 13064831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Complemental strand, 15804460 - 15804418
Alignment:
Q  39 ttctctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||| | ||||||||||||||||| ||||||||||||||||    
T  15804460 ttctctcatagtgtgtttggatggggaaatgttttgagggaat 15804418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 81
Target Start/End: Complemental strand, 20523291 - 20523257
Alignment:
Q  47 gagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||||||||||||||| ||||    
T  20523291 gagtgtgtttggatgggggaatgttttgagagaat 20523257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 81
Target Start/End: Complemental strand, 33245441 - 33245407
Alignment:
Q  47 gagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||| |||||    
T  33245441 gagtgtgtttggatgggggaatgttttgatggaat 33245407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 33995780 - 33995718
Alignment:
Q  197 ctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    |||||| ||||||||||| ||||||||||| || |||  |||||||||||| || ||||||||    
T  33995780 ctaaaaattaagaatttcgaaattcttcatcgtaatattttttcaaatttttcattttggtcc 33995718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 40643838 - 40643884
Alignment:
Q  48 agtgtgtttggatgggggaatgttttgagggaattcaaatattttga 94  Q
    ||||||||||||||| | |||||||||||||||||||| || |||||    
T  40643838 agtgtgtttggatggagaaatgttttgagggaattcaactactttga 40643884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 40809338 - 40809376
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  40809338 ctaagagtgtgtttggatggggaaatgttttgagagaat 40809376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 19533975 - 19533942
Alignment:
Q  48 agtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||| ||||||||||||||||||    
T  19533975 agtgtgtttggatggaggaatgttttgagggaat 19533942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 37145533 - 37145484
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    |||||| |||| ||||||||||| ||||| ||||||| ||||||||||||    
T  37145533 aatgttatgagagaattcaaatactttgaggtgaatttcattgtttggat 37145484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 37145569 - 37145536
Alignment:
Q  48 agtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||| |||||||||||||||||||||||||||||    
T  37145569 agtgggtttggatgggggaatgttttgagggaat 37145536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 6634010 - 6634046
Alignment:
Q  41 ctctaagagtgtgtttggatgggggaatgttttgagg 77  Q
    ||||||||||||||||||||||||| || ||||||||    
T  6634010 ctctaagagtgtgtttggatggggggatattttgagg 6634046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 153
Target Start/End: Complemental strand, 13064963 - 13064899
Alignment:
Q  89 ttttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatg 153  Q
    |||||| |||||||| ||||||||||||||||||| ||   |||| ||||| ||| |||||||||    
T  13064963 ttttgaggtgaattctattgtttggataataatttgaaatttttttaaaataatgaaaatttatg 13064899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 16515182 - 16515142
Alignment:
Q  41 ctctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||| | ||||||||| |||||||    
T  16515182 ctctaagagtgtgtttggatgagagaatgtttttagggaat 16515142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 259
Target Start/End: Original strand, 31368041 - 31368093
Alignment:
Q  207 agaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||| ||||||||| |||||| ||| ||||||||| | ||||||||    
T  31368041 agaatttcaaatttcttcattattataattttacaaattttggattttggtcc 31368093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 174
Target Start/End: Original strand, 40157961 - 40158001
Alignment:
Q  134 caaaatgatggaaatttatgaagtattttgttcaagttaaa 174  Q
    |||||||||| |||||||| ||||||||| |||||||||||    
T  40157961 caaaatgatgaaaatttattaagtattttattcaagttaaa 40158001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 167; Significance: 2e-89; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 41 - 259
Target Start/End: Complemental strand, 37447419 - 37447201
Alignment:
Q  41 ctctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatg 140  Q
    ||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  37447419 ctctaagagcgtgtttggataggggaatgttttgagagaattcaaatactttgatgtgaattccattgtttggataataatttgaagaattttcaaaatg 37447320  T
Q  141 atggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttc 240  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||| ||  | |||||||||||||||||||||||||||||||||||| |||||    
T  37447319 atggaaatttatgaagtatttggttcaagttaaatttagagaatttcaaatgacaccaaaaagttaagaatttcaaaattcttcattgttataatttttc 37447220  T
Q  241 aaattttgcaatttggtcc 259  Q
    |||||||||| ||||||||    
T  37447219 aaattttgcattttggtcc 37447201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 66 - 259
Target Start/End: Complemental strand, 37036984 - 37036791
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  37036984 aatgttttgagggaattcaaatattttgatgtaaattccattgttcggataataatttgaagaattttcaaaatgatagaaatttatgaagtattttgtt 37036885  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||||| |||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  37036884 caagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgttagaaattttcaaattttgcattttggtcc 37036791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 51 - 259
Target Start/End: Original strand, 44571225 - 44571432
Alignment:
Q  51 gtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaattt 150  Q
    |||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  44571225 gtgtttggatgggg-aatgttttgagggaattcaaatactttgaagtgaattccattgtttggataataatttaaagaatttttaaaatgatggaaattt 44571323  T
Q  151 atgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgca 250  Q
    || |||||||||||||||||| |||||| |||||||||||| ||  |||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  44571324 ataaagtattttgttcaagttgaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgttatattttttcaaattttgca 44571423  T
Q  251 atttggtcc 259  Q
     ||||||||    
T  44571424 ttttggtcc 44571432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 66 - 259
Target Start/End: Original strand, 8224806 - 8224999
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8224806 aatgttttgagggaattgaaatactttgatgtgaattccattgtttggatgataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 8224905  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||||| |||||||||||| ||  ||||||| ||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||    
T  8224906 caagttaaatttagagaatttcaaatgacacctaaaaggtaagaattttaaaattcttcattgttataatttttcaaattttgcattttggtcc 8224999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 67 - 247
Target Start/End: Original strand, 39887166 - 39887346
Alignment:
Q  67 atgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttc 166  Q
    ||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  39887166 atgttttgaagaaattcaaatactttgatgtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttc 39887265  T
Q  167 aagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaatttt 247  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  39887266 aagttaaatttaaagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgttataattttttaaatttt 39887346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 66 - 259
Target Start/End: Complemental strand, 37448436 - 37448243
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtat-tttgt 164  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||| |||||    
T  37448436 aatgttttgagggaatttaaatactttgatgtgaattccattgtttggata-taatttggagaattttcaaaatgatggaaatttatgaagtatatttgt 37448338  T
Q  165 tcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  37448337 tcaagttaaatttaaagaatttcaaatgacatctaaaagtgaagaatttcaaaattcttcattgtcataaattttcaaatttttcaatttggtcc 37448243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 66 - 259
Target Start/End: Complemental strand, 28632620 - 28632429
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    ||||||||||| |||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  28632620 aatgttttgagagaattcaa-tactttgaggtgaattccattgtttggataataatttaaagaattttcaaaatgatgaaaatttatgaagtattttgtt 28632522  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||||| |||||||||||| || |||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  28632521 caagttaaatttagagaatttcaaatgacatctaaaagttaagaatttcaaatttcttcattgttat-aattttcaaattttgcattttggtcc 28632429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 69 - 255
Target Start/End: Original strand, 35491198 - 35491384
Alignment:
Q  69 gttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaa 168  Q
    |||||||| ||||| |||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  35491198 gttttgagagaatttaaatattttgatatgaatttcattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgctcaa 35491297  T
Q  169 gttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttg 255  Q
    |||||||||| |||||||||||| ||   ||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||    
T  35491298 gttaaatttagagaatttcaaatgacacttaaaagttaagaatttcaaaattcttcattgttataattttccaaattttgcattttg 35491384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 43 - 225
Target Start/End: Complemental strand, 41823218 - 41823036
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgat 142  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||  ||||  ||||||||||||||||||||||| ||| ||||||||||||||| ||    
T  41823218 ctaagagtgtgtttggatgggggaatgttttgaaggaattcaaataccttgagatgaattccattgtttggataatagtttgaagaattttcaaaataat 41823119  T
Q  143 ggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttca 225  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||| ||  |||||||||||||||||||||||||||||    
T  41823118 ggaaatttatgaagtattttgttcaagttaaatgtagagaatttcaaataacacctaaaagttaagaatttcaaaattcttca 41823036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 42 - 233
Target Start/End: Original strand, 50471764 - 50471955
Alignment:
Q  42 tctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatga 141  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||| | |||||||  |||||||||||||||||||||||||||||||||||||    
T  50471764 tctaagagtgtgtttggatgggggaaagttttgagggaattcaaatactttcaggtgaattttattgtttggataataatttaaagaattttcaaaatga 50471863  T
Q  142 tggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttata 233  Q
    ||||||||| |||||||||||||| || ||||||||| | |||||||||| ||   |||| |||||||||||||||||||||||||||||||    
T  50471864 tggaaatttttgaagtattttgttgaaattaaatttagaaaatttcaaatgacacataaatgttaagaatttcaaaattcttcattgttata 50471955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 46 - 259
Target Start/End: Complemental strand, 15468023 - 15467805
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttg-----agggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatg 140  Q
    |||||||||||||||| |||||||| |||     |||||||||||||| ||||  |||||||||||||||||||||||||||| ||| ||||||||||||    
T  15468023 agagtgtgtttggatgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatg 15467924  T
Q  141 atggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttc 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| ||  ||||||| ||||||||||||| |||||||||||| | | |||||    
T  15467923 atggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaagctaagaatttcaaatttcttcattgttgttatttttc 15467824  T
Q  241 aaattttgcaatttggtcc 259  Q
    | |||||||| ||||||||    
T  15467823 atattttgcattttggtcc 15467805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 66 - 255
Target Start/End: Complemental strand, 49216373 - 49216183
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    ||||||| ||||||||||||||| ||||| || |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49216373 aatgtttcgagggaattcaaatactttgaggtaaatttcattgttgggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 49216274  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaa-ttcttcattgttataaattttcaaattttgcaatttg 255  Q
    ||||||||||||| |||||||||||| ||  ||||| |||||||||||||||| ||||| |||||||||| ||||||||||||||| ||||    
T  49216273 caagttaaatttagagaatttcaaatgacacctaaatgttaagaatttcaaaatttctttattgttataatttttcaaattttgcattttg 49216183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 66 - 258
Target Start/End: Complemental strand, 37447937 - 37447745
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||| ||||||||||||  |||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  37447937 aatgttttgaaggaattcaaataccttgaggtgaattccattgtttggataatagtttgaagaattttcaaaatgatggaaatttatgaagtattttgtt 37447838  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtc 258  Q
    |||||||||| || |||| ||||||| ||  ||||||||||||||||||||||||||||||||| |||  |||||||||||| || |||||||    
T  37447837 caagttaaatgtagagaaattcaaatgacacctaaaagttaagaatttcaaaattcttcattgtcatattttttcaaattttacattttggtc 37447745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 41822601 - 41822405
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgat 142  Q
    |||| ||||||||||||||   |||||||||||||||||||||||| ||| |  ||||||||||||||||||||||||||| ||||||||||||||||||    
T  41822601 ctaaaagtgtgtttggatgaatgaatgttttgagggaattcaaatactttaagatgaattccattgtttggataataatttgaagaattttcaaaatgat 41822502  T
Q  143 ggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaatttt 239  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||| ||  |||||| |||||||||| |||||||||||||| ||||| ||||    
T  41822501 ggaaatttatgaagtattttgttcaagttaaaattagagaatttcaaatgacacctaaaacttaagaattttaaaattcttcattgatataattttt 41822405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 66 - 259
Target Start/End: Original strand, 44570716 - 44570909
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||| ||||||||||||  |||| |||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||    
T  44570716 aatgttttgaaggaattcaaataccttgaggtgaattccattgtttggataatagtttgaagaattttcgaaatgatggaaatttatgaagtattttgtt 44570815  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    |||||||||| || |||||||||||| ||  |||||||||||||||||||||||| |||||||| |||  |||||||||||| || ||||||||    
T  44570816 caagttaaatatagagaatttcaaatgacacctaaaagttaagaatttcaaaattgttcattgtcatattttttcaaattttacattttggtcc 44570909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 74 - 259
Target Start/End: Original strand, 49659262 - 49659448
Alignment:
Q  74 gagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaa 173  Q
    ||||||||| ||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  49659262 gagggaatttaaatactttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggtaatttatgaagtattttgttcaagttaa 49659361  T
Q  174 atttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttata-aattttcaaattttgcaatttggtcc 259  Q
    ||||| |||||||||||| || |||||||||||| |||||||||| |||||||||||| |   |||| |||||||||| ||||||||    
T  49659362 atttagagaatttcaaataacatctaaaagttaaaaatttcaaaactcttcattgttaaattttttttaaattttgcattttggtcc 49659448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 66 - 234
Target Start/End: Original strand, 31166348 - 31166516
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||| ||||| ||||||||||||  ||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  31166348 aatgttttgatggaatgcaaatattttgagatgaattctattgtttgaataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgtt 31166447  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataa 234  Q
    ||||||||||||| |||||||||||| || |||||||| ||||||||||||  ||||||||||||||||    
T  31166448 caagttaaatttatagaatttcaaatgacatctaaaagctaagaatttcaattttcttcattgttataa 31166516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 73 - 257
Target Start/End: Original strand, 34003506 - 34003690
Alignment:
Q  73 tgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagtta 172  Q
    |||| ||||||||||| ||||| |||||||||||||||||||| ||||||| | ||||| ||||||||||||||||||||||| ||||||||||||||||    
T  34003506 tgagagaattcaaatactttgaggtgaattccattgtttggatgataatttgatgaattatcaaaatgatggaaatttatgaaatattttgttcaagtta 34003605  T
Q  173 aatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggt 257  Q
    |||||| ||||||| |||| ||  ||||||||||||||||||||| ||||||||||| ||||||||| |||||||||| ||||||    
T  34003606 aatttagagaatttaaaataacacctaaaagttaagaatttcaaatttcttcattgtaataaatttttaaattttgcattttggt 34003690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 39 - 213
Target Start/End: Original strand, 48953580 - 48953753
Alignment:
Q  39 ttctctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaa 138  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||| || |||||||| ||||||||||||||||||| ||||||||||||||    
T  48953580 ttctcttagagtgtgtttggatgggggaatgttttgaaggaattcaaatattt-gaggtgaattctattgtttggataataatttgaagaattttcaaaa 48953678  T
Q  139 tgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaattt 213  Q
    ||||||| |||||||||||||||||||||||| ||||||| ||||||| |||| ||  ||||||| |||||||||    
T  48953679 tgatggatatttatgaagtattttgttcaagtcaaatttagagaatttgaaatgacacctaaaagctaagaattt 48953753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 41 - 250
Target Start/End: Original strand, 13181601 - 13181810
Alignment:
Q  41 ctctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatg 140  Q
    |||||| |||||||||||||||  |||| ||||||||||||||||||| |||||  | ||||  ||| ||||||||||||||| |||||| |||||||||    
T  13181601 ctctaaaagtgtgtttggatggaagaatcttttgagggaattcaaatactttgagattaattatattttttggataataatttgaagaatattcaaaatg 13181700  T
Q  141 atggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttc 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| ||   ||||||||||||||||||| |||| |||| ||| ||| |||||    
T  13181701 atggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacttaaaagttaagaatttcaatattcctcatagttgtaatttttc 13181800  T
Q  241 aaattttgca 250  Q
    |||| |||||    
T  13181801 aaatattgca 13181810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 50 - 259
Target Start/End: Complemental strand, 21267861 - 21267653
Alignment:
Q  50 tgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatt 149  Q
    ||||||| ||||||||||| |||||||||||||  |||| |||||  | |||| |||||||||||||||||||| |||||||||||||||||||||| ||    
T  21267861 tgtgtttagatgggggaatattttgagggaatttgaatactttgagataaatttcattgtttggataataatttgaagaattttcaaaatgatggaa-tt 21267763  T
Q  150 tatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgc 249  Q
    ||||||| ||||||||||| ||||||||| |||||||||||| ||  ||||||||||||||||||||| |||||||||||||||| |||| ||| ||| |    
T  21267762 tatgaagaattttgttcaatttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaatttcttcattgttataattttttaaaatttac 21267663  T
Q  250 aatttggtcc 259  Q
    | ||||||||    
T  21267662 attttggtcc 21267653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 52 - 249
Target Start/End: Complemental strand, 52135674 - 52135477
Alignment:
Q  52 tgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaattta 151  Q
    ||||||||||| | ||||||||||||||||||||||||||| | || ||||  ||||||||||| ||||||| ||||||||| |||||||||||||||||    
T  52135674 tgtttggatggagaaatgttttgagggaattcaaatatttttaggtaaattttattgtttggatgataatttgaagaatttttaaaatgatggaaattta 52135575  T
Q  152 tgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgc 249  Q
    ||||||||||||||||||||||| ||  |||||||||||| || |||||||||||||||||| ||| ||||||||||||| || ||| ||| ||||||    
T  52135574 tgaagtattttgttcaagttaaagtttgagaatttcaaatgacgtctaaaagttaagaattttaaatttcttcattgttaaaattttccaagttttgc 52135477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 32128048 - 32128218
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatgga 145  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||  ||||||||||||||||  |||||||||| ||||||||||||||||||||     
T  32128048 agagtgtgtttagatgggggaatgttttgagggaattcaaatactttgtggtgaattccattgttttaataataatttgaagaattttcaaaatgatggg 32128147  T
Q  146 aatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaa 216  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||| ||   |||||  ||||||||||||    
T  32128148 aatttatgaggtattttgttcaagttaaatttagagaatttcaaatgacgcttaaaaagtaagaatttcaa 32128218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 66 - 258
Target Start/End: Complemental strand, 6470721 - 6470530
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    ||||||||||||||||||||||  ||||| ||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||  | ||||||    
T  6470721 aatgttttgagggaattcaaattctttgaggtggattccattgtttgaataataatttgaagaattttcaaaatgatggaaatttatgaaaaaatttgtt 6470622  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtc 258  Q
    ||||||||||||| |||||||||||| ||  | |||  ||||||||||||||||| | ||||||||||| ||||||| ||||||| |||||||    
T  6470621 caagttaaatttagagaatttcaaatgac-acgaaatattaagaatttcaaaattatccattgttataatttttcaagttttgcattttggtc 6470530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 68 - 230
Target Start/End: Original strand, 946415 - 946576
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    ||||||||||||||| ||||| ||||   ||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  946415 tgttttgagggaatttaaatactttgga-tgaattctattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttca 946513  T
Q  168 agttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgtt 230  Q
    ||||||||||| |||||||||||| ||  ||||||| ||||||||||||| ||||||||||||    
T  946514 agttaaatttagagaatttcaaatgacacctaaaagctaagaatttcaaatttcttcattgtt 946576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 66 - 250
Target Start/End: Original strand, 10166537 - 10166720
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||| |||| |||||||| || | ||||||| ||||||||| || |||||||  ||||||||||||| |||| |||||||||||||||||| ||    
T  10166537 aatgttttgaaggaactcaaatatatttaggtgaatttcattgtttgaatgataatttggagaattttcaaaacgatg-aaatttatgaagtattttatt 10166635  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgca 250  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||| ||| ||||||||| |||||| |||||||||||||||    
T  10166636 caagttaaatttaaagaatttcaaatgacacctaaaagttaagaattttaaatttcttcattcttataatttttcaaattttgca 10166720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 48 - 204
Target Start/End: Complemental strand, 41822751 - 41822594
Alignment:
Q  48 agtgtgtttggatgggggaatgttttgagggaatt-caaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaa 146  Q
    |||||||||| |||   |||||||||||||||||| |||||| |||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  41822751 agtgtgtttgaatgaatgaatgttttgagggaatttcaaatactttgagatgaattccattgtttggataataatttgaagaattttcaaaatgatggaa 41822652  T
Q  147 atttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagt 204  Q
    |||||||||||||||||||||||||||| ||| |||||||||||| ||  ||||||||    
T  41822651 atttatgaagtattttgttcaagttaaaattagagaatttcaaatgacacctaaaagt 41822594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 46 - 217
Target Start/End: Original strand, 47820226 - 47820401
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttg-----agggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatg 140  Q
    ||||||||||||||||||||||||| |||     |||||||||||||| |||   ||||||| |||||||||||||||||||| ||| ||||| ||||||    
T  47820226 agagtgtgtttggatgggggaatgtattgttttaagggaattcaaatactttagggtgaatttcattgtttggataataatttgaagcatttttaaaatg 47820325  T
Q  141 atggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaa 217  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||| ||  |||||||||||||||||||||    
T  47820326 atggaaatttatgaagtattttgttcaagttaaattt-aggaatttcaaatgacacctaaaagttaagaatttcaaa 47820401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 65 - 246
Target Start/End: Original strand, 32201806 - 32201987
Alignment:
Q  65 gaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataat-aatttaaagaattttcaaaatgatggaaatttatgaagtattttg 163  Q
    |||| |||||| ||||||||||| |||| | ||||||||||||||||||||||| ||||| |||||||||||||||||| | ||||| ||||||||||||    
T  32201806 gaatattttgaaggaattcaaatgttttaaggtgaattccattgtttggataattaatttgaagaattttcaaaatgattggaattt-tgaagtattttg 32201904  T
Q  164 ttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattt 246  Q
    ||| |||||||| || |||||||||||| ||  ||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  32201905 ttctagttaaatatagagaatttcaaatgacacctaaaagctatgaatttcaaatttcttcattgttataatttttcaaattt 32201987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 90 - 255
Target Start/End: Complemental strand, 23956373 - 23956208
Alignment:
Q  90 tttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaa 189  Q
    ||||| ||||||| |||||||||||| ||||||| || |||| |||| ||||||||||||||| ||||||||| ||||||||||||||| ||||||||||    
T  23956373 tttgaggtgaatttcattgtttggattataatttgaaaaattatcaatatgatggaaatttataaagtattttattcaagttaaatttagagaatttcaa 23956274  T
Q  190 attacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttg 255  Q
    || ||   |||||||||||||||||||| ||||||||||||| || ||||||||||||||| ||||    
T  23956273 atgacacataaaagttaagaatttcaaatttcttcattgttaaaatttttcaaattttgcattttg 23956208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 70 - 244
Target Start/End: Original strand, 946955 - 947129
Alignment:
Q  70 ttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaag 169  Q
    |||||||| |||||||||| | ||| |||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||| |||||||||||||    
T  946955 ttttgaggaaattcaaatactatgaggtgaattccattgtttggataataatttgaagcattttcaaaatgatagaaatttatgaaatattttgttcaag 947054  T
Q  170 ttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaat 244  Q
    |||||||||||||||||||||| ||  | || |  |||||||||| |||   |||||| |||||| |||||||||    
T  947055 ttaaatttaaagaatttcaaatgacacccaacaactaagaatttctaaaaatttcattcttataatttttcaaat 947129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 66 - 234
Target Start/End: Original strand, 31195494 - 31195662
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||| ||||| |||| ||||||||||| ||||||||||||||||| |||||||||| ||||||||| ||||||||  ||||||| |||||||||||||    
T  31195494 aatgttctgaggaaatttaaatattttgaggtgaattccattgtttgtataataatttgaagaatttttaaaatgataaaaatttacgaagtattttgtt 31195593  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataa 234  Q
     |||| ||||||||||||||| |||| ||  || |||| ||||||||||||||   |||||||||||||    
T  31195594 aaagtcaaatttaaagaatttgaaatgacacctgaaagctaagaatttcaaaaaaattcattgttataa 31195662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 42230758 - 42230883
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataattta-aagaattttcaaaatgatggaaatttatgaagtattttgt 164  Q
    |||||||||||| |||| ||||||||||| ||||||| ||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||| ||||    
T  42230758 aatgttttgaggtaatttaaatattttgaagtgaatttcattgtttggataataattttgaagaatttttaaaatgatggaaatttatgaagtatcttgt 42230857  T
Q  165 tcaagttaaatttaaagaatttcaaa 190  Q
    | |||||||||||| |||||||||||    
T  42230858 ttaagttaaatttagagaatttcaaa 42230883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 68 - 255
Target Start/End: Original strand, 32647341 - 32647526
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagta-ttttgttc 166  Q
    |||||||||| |||||||||| ||||  |||||| |||||||||||||| |||||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  32647341 tgttttgaggaaattcaaatactttggggtgaataccattgtttggatattaatttgaagcattttcaaaatgatggaaatttatgaagtatttttgttc 32647440  T
Q  167 aagttaaatttaaagaatttcaaattacttct-aaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttg 255  Q
    ||||||    || |||||||||||| ||  || ||||| ||||||||||||| |||||||||||| | | |||||| |||||||| ||||    
T  32647441 aagtta----tagagaatttcaaatgacacctaaaaagctaagaatttcaaatttcttcattgttgttatttttcatattttgcattttg 32647526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 66 - 175
Target Start/End: Complemental strand, 32287968 - 32287858
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccatt-gtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgt 164  Q
    |||||||||||| |||||||||| ||||| ||||| |||||| |||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||    
T  32287968 aatgttttgaggaaattcaaatactttgaagtgaaatccattagtttggataataatttgaagaatttccaaaatgatggaaatttataaagtattttgt 32287869  T
Q  165 tcaagttaaat 175  Q
    |||||||||||    
T  32287868 tcaagttaaat 32287858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 66 - 255
Target Start/End: Original strand, 51847890 - 51848077
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||| | | |||||||||| ||| | ||||||||||| |||||||| |||||||  ||||| || | |||||||||||||||| ||||||||||||    
T  51847890 aatgttttaaagaaattcaaatacttt-aggtgaattccatcgtttggatgataatttggagaatattaagaatgatggaaatttatcaagtattttgtt 51847988  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttg 255  Q
     ||||| ||||||  ||||||||||| ||  ||||||| || |||||||||| ||||||||| |||||| ||||||||||||||| ||||    
T  51847989 taagtt-aatttatggaatttcaaatgacacctaaaagctatgaatttcaaatttcttcattcttataatttttcaaattttgcattttg 51848077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 158 - 259
Target Start/End: Complemental strand, 43619820 - 43619719
Alignment:
Q  158 attttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggt 257  Q
    ||||||||||||||||| ||| |||||||||||| ||  |||||| |||||||||||||||||||||||| |||||| ||||||||||||| | ||||||    
T  43619820 attttgttcaagttaaaattagagaatttcaaatgacacctaaaacttaagaatttcaaaattcttcattattataatttttcaaattttgtattttggt 43619721  T
Q  258 cc 259  Q
    ||    
T  43619720 cc 43619719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 1902138 - 1902253
Alignment:
Q  105 attgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagt 204  Q
    ||||||||||| |||||||| |||||||| ||||||||||||||| |||| ||||||| |  |||| ||||||  |||||||||||| ||  ||||||||    
T  1902138 attgtttggatgataatttagagaatttttaaaatgatggaaattcatgaggtattttctcgaagtaaaattttgagaatttcaaatgacacctaaaagt 1902237  T
Q  205 taagaatttcaaaatt 220  Q
    || |||||||||||||    
T  1902238 taggaatttcaaaatt 1902253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 41481460 - 41481303
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||| | |||||||||| ||| |  | ||||  |||||||| |  |||||||| || | ||| ||||||||| |||||||||||||||||||||    
T  41481460 aatgttttgaagaaattcaaatacttttagatcaattttattgtttgaaagataatttagaggaatttgaaaatgatgtaaatttatgaagtattttgtt 41481361  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattctt 223  Q
    || |||||||||||| |||||||||| || |||| ||| ||  ||||||||| |||||    
T  41481360 caggttaaatttaaataatttcaaataacatctataagatagaaatttcaaatttctt 41481303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 46 - 112
Target Start/End: Original strand, 32572940 - 32573006
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttg 112  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||| |||||||| ||||||||    
T  32572940 agagtgtgtttggatgggggaatgttttgagggaattcaactactttgaggtgaattctattgtttg 32573006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 15245457 - 15245526
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttg 112  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||| | |||||||| ||||||||    
T  15245457 ctaagagtgtgtttggatgggggaatgttttgagggaattcaactactttaaggtgaattctattgtttg 15245526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 155
Target Start/End: Original strand, 34003419 - 34003504
Alignment:
Q  70 ttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaa 155  Q
    ||||||||| ||||||||| ||||| |||||||||||| ||||||| ||||||| | |||||||||||||||  ||||||||||||    
T  34003419 ttttgagggcattcaaatactttgaggtgaattccattatttggatgataatttgatgaattttcaaaatgagagaaatttatgaa 34003504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 158
Target Start/End: Complemental strand, 43623013 - 43622921
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagta 158  Q
    |||||||||||  |||| ||||| ||||| ||||||| |||| |||| |||||||||| ||||||||||||||||||| ||||||| ||||||    
T  43623013 aatgttttgagaaaatttaaatactttgaggtgaatttcattatttgaataataatttgaagaattttcaaaatgatgaaaatttacgaagta 43622921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 26501114 - 26501065
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26501114 aatgttttgagggaattcaaatactttgatgtgaattccattgtttggat 26501065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 5474414 - 5474474
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattc 103  Q
    |||||||||||||||||||||||||||||||||||||||| || || ||||| ||||||||    
T  5474414 ctaagagtgtgtttggatgggggaatgttttgagggaatttaattactttgaagtgaattc 5474474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 40264046 - 40264114
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttg 112  Q
    ||||||||||||||||| |||||||||||||||||||||||| || |||||  ||||||| ||||||||    
T  40264046 taagagtgtgtttggataggggaatgttttgagggaattcaactactttgagatgaattctattgtttg 40264114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 17502191 - 17502255
Alignment:
Q  39 ttctctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattc 103  Q
    ||||||||||||||||||||||| |||||| ||||||| |||||||| || ||||| ||||||||    
T  17502191 ttctctaagagtgtgtttggatgagggaatattttgagagaattcaactactttgaggtgaattc 17502255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 112
Target Start/End: Complemental strand, 23536213 - 23536142
Alignment:
Q  41 ctctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttg 112  Q
    |||| ||| |||||||||||||||||||||||||||||||||||| || ||| | |||||||  ||||||||    
T  23536213 ctcttagaatgtgtttggatgggggaatgttttgagggaattcaactactttaaggtgaattatattgtttg 23536142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 45565538 - 45565479
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaatt 102  Q
    ||||||||||||||||||||  ||||||||||||||||||||| || ||||| |||||||    
T  45565538 ctaagagtgtgtttggatggaagaatgttttgagggaattcaactactttgaggtgaatt 45565479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 112
Target Start/End: Complemental strand, 37214959 - 37214894
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttg 112  Q
    |||||||||||||||||| ||||||||||||||||||||| ||  |||| |||||||| ||||||||    
T  37214959 agagtgtgtttggatgggagaatgttttgagggaattcaacta-cttgaggtgaattctattgtttg 37214894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 47165247 - 47165197
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggata 116  Q
    ||||||||||||||||||||||| ||| | |||||||||||||||||||||    
T  47165247 aatgttttgagggaattcaaatactttaaggtgaattccattgtttggata 47165197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 23536065 - 23536102
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23536065 taagagtgtgtttggatgggggaatgttttgagggaat 23536102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 24273255 - 24273206
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    |||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  24273255 aatgttatgagggaattcaaatactttgaggtgaattccattgtttggat 24273206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 39589107 - 39589042
Alignment:
Q  99 aattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgt 164  Q
    |||||||||||||||||||||||||| | | || | ||||||||  ||||||||||||||||||||    
T  39589107 aattccattgtttggataataatttagacatttcttaaaatgataaaaatttatgaagtattttgt 39589042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 34007479 - 34007419
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattc 103  Q
    |||||||||||||||||||||| ||| |||||||||||||||| || |||||  |||||||    
T  34007479 ctaagagtgtgtttggatggggaaatattttgagggaattcaactactttgagttgaattc 34007419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 259
Target Start/End: Original strand, 42230873 - 42230925
Alignment:
Q  207 agaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||||||||||||| |||||| ||||| ||||||||| ||||||||    
T  42230873 agaatttcaaaattcttcattattataatttttcgaattttgcattttggtcc 42230925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 206
Target Start/End: Complemental strand, 52280988 - 52280848
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    ||||||||||||||||| ||||  ||| | || ||||  |||||   ||| ||||||| ||||||||| |||||||  |||||||| |||||| ||| |     
T  52280988 aatgttttgagggaatttaaattattttaagtaaattttattgtactgatgataattttaagaatttttaaaatgactgaaatttacgaagtaatttatc 52280889  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagtta 206  Q
    ||  | |||||||||||||||||||| ||  ||||||||||    
T  52280888 catatcaaatttaaagaatttcaaatgacacctaaaagtta 52280848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 15034818 - 15034783
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||||    
T  15034818 agagtgtgtttggatgggggaatgttttgagggaat 15034783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 24273293 - 24273258
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||||    
T  24273293 agagtgtgtttggatgggggaatgttttgagggaat 24273258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 30190295 - 30190260
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||||    
T  30190295 agagtgtgtttggatgggggaatgttttgagggaat 30190260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 191
Target Start/End: Complemental strand, 28250586 - 28250465
Alignment:
Q  70 ttttgagggaattcaaat-attttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaa 168  Q
    |||||||||||||||||| ||||||  || ||||  ||||||||||| ||||||||    ||||| ||||| ||  |||| |||||| |||||||| |||    
T  28250586 ttttgagggaattcaaattattttgg-gtaaattttattgtttggatcataatttagtacatttttaaaattataaaaatatatgaaatattttgtccaa 28250488  T
Q  169 gttaaatttaaagaatttcaaat 191  Q
    |||||||||| ||||||| ||||    
T  28250487 gttaaatttatagaattttaaat 28250465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 224
Target Start/End: Original strand, 32948491 - 32948587
Alignment:
Q  132 ttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaat--tactt--ctaaaagttaagaatttcaaaattcttc 224  Q
    |||| ||| ||| |||||||| || |||||||| ||||| ||||||||||||||||||||  |||||   |||||| || |||||||||||||||||    
T  32948491 ttcataattatgaaaatttataaaatattttgtccaagtcaaatttaaagaatttcaaattatacttacttaaaagctatgaatttcaaaattcttc 32948587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 43623054 - 43623016
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  43623054 ctaagagtgtgtttggatgggggaatgttttgatggaat 43623016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 4038073 - 4038110
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  4038073 taagagtgtgtttgggtgggggaatgttttgagggaat 4038110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 15034657 - 15034694
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  15034657 taagagtgtgtttggatggaggaatgttttgagggaat 15034694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 26501154 - 26501117
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  26501154 taagagtgtgtttggatggaggaatgttttgagggaat 26501117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 34007358 - 34007415
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattc 103  Q
    ||||||||||||||||||| ||| |||||||||||||||| || |||||  |||||||    
T  34007358 agagtgtgtttggatggggaaatattttgagggaattcaactactttgagttgaattc 34007415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 17502321 - 17502282
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaa 85  Q
    ||||||||||| ||| ||||||||||||||||||||||||    
T  17502321 agagtgtgttttgattggggaatgttttgagggaattcaa 17502282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 81
Target Start/End: Original strand, 27804269 - 27804300
Alignment:
Q  50 tgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||    
T  27804269 tgtgtttggatgggggaatgttttgagggaat 27804300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 191
Target Start/End: Complemental strand, 33977901 - 33977854
Alignment:
Q  144 gaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaat 191  Q
    ||||| ||||||||||||| |  |||||||||||||||||||||||||    
T  33977901 gaaatctatgaagtattttatctaagttaaatttaaagaatttcaaat 33977854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 81
Target Start/End: Original strand, 34756427 - 34756462
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||| |||||||||||||||||||||||||||||||    
T  34756427 agagagtgtttggatgggggaatgttttgagggaat 34756462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 80
Target Start/End: Complemental strand, 4038234 - 4038200
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaa 80  Q
    ||||||||||||||||||||||| |||||||||||    
T  4038234 agagtgtgtttggatgggggaatattttgagggaa 4038200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 12087060 - 12086990
Alignment:
Q  104 cattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaa 174  Q
    |||||||||||| ||||  |  |||||||||||||||| | ||||||||||| ||||||||  ||||||||    
T  12087060 cattgtttggatgataacatggagaattttcaaaatgacgaaaatttatgaaatattttgtcaaagttaaa 12086990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 112
Target Start/End: Original strand, 34756465 - 34756511
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttg 112  Q
    |||||||||||||||||||| || ||||| |||||||| ||||||||    
T  34756465 aatgttttgagggaattcaactactttgaggtgaattctattgtttg 34756511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 77
Target Start/End: Complemental strand, 27804426 - 27804393
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagg 77  Q
    ||||||||||||||||||| ||||||||||||||    
T  27804426 taagagtgtgtttggatggaggaatgttttgagg 27804393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 45565432 - 45565477
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgttt 111  Q
    |||||||||||||||||||| |||||| | |||||||| |||||||    
T  45565432 aatgttttgagggaattcaactattttaaggtgaattctattgttt 45565477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 76
Target Start/End: Original strand, 31166308 - 31166340
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgag 76  Q
    |||||||||||||||||| ||||||||||||||    
T  31166308 taagagtgtgtttggatgagggaatgttttgag 31166340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 44410306 - 44410346
Alignment:
Q  41 ctctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||| ||||||| |||||||||| |||||||||||||||||    
T  44410306 ctcttagagtgtatttggatgggagaatgttttgagggaat 44410346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 81
Target Start/End: Original strand, 45565397 - 45565429
Alignment:
Q  49 gtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||||||||||||| ||||    
T  45565397 gtgtgtttggatgggggaatgttttgagagaat 45565429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 47074151 - 47074210
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattc 103  Q
    |||| ||||||||||||| ||||||| |||||| ||||||||| || ||||| ||||||||    
T  47074151 ctaaaagtgtgtttggat-ggggaatattttgaaggaattcaactactttgaggtgaattc 47074210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 166; Significance: 6e-89; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 66 - 259
Target Start/End: Original strand, 29091175 - 29091368
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  29091175 aatgttttgagggaattcaaatactttgatgtgaattctattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgtt 29091274  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29091275 caagttaaatttaaagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattctgcaatttggtcc 29091368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 46 - 255
Target Start/End: Complemental strand, 53760845 - 53760636
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatgga 145  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||    
T  53760845 agagtgtgtttgaatgggggaatgttttgagggaattcaaatattttgatgtgaattctattgtttggataataatttgaagaatttttaaaatgatgga 53760746  T
Q  146 aatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaatt 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||  | |||||||||||| ||||||||||||||||||||||| ||||||||||    
T  53760745 aatttatgaagtattttgttcaagttaaatttaaagaatttcaaatgacaccaaaaagttaagaaattcaaaattcttcattgttataatttttcaaatt 53760646  T
Q  246 ttgcaatttg 255  Q
    ||||| ||||    
T  53760645 ttgcattttg 53760636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 46 - 255
Target Start/End: Original strand, 56339151 - 56339360
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatgga 145  Q
    ||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  56339151 agagtgtgtttggatgatggaatgttttgagggaattcaaatactttgatgtgaatttcattgtttggataataatttgaagaattttcaaaatgatgga 56339250  T
Q  146 aatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaatt 245  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||  |||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  56339251 aatttatgaagtattttgtccaagttaaatttaaagaatttcaaataacacctaaaagtgaagaatttcaaaattcttcattgttataatttttcaaatt 56339350  T
Q  246 ttgcaatttg 255  Q
    ||||| ||||    
T  56339351 ttgcattttg 56339360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 54 - 259
Target Start/End: Original strand, 17727091 - 17727296
Alignment:
Q  54 tttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatg 153  Q
    ||||||||||||||||||||| ||||||||||||| ||||| ||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||| |    
T  17727091 tttggatgggggaatgttttgtgggaattcaaatactttgaggtgaatttcattgtttggataataatttgaagaattttcaaaattatggaaatttacg 17727190  T
Q  154 aagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatt 253  Q
    |||||||||||| |||||||||||| |||||||||||| ||  |||||||||||||||||||||||||||||||||||||| |||||||||||| || ||    
T  17727191 aagtattttgttaaagttaaatttagagaatttcaaatgacaactaaaagttaagaatttcaaaattcttcattgttataatttttcaaatttttcattt 17727290  T
Q  254 tggtcc 259  Q
    ||||||    
T  17727291 tggtcc 17727296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 48 - 255
Target Start/End: Complemental strand, 46243148 - 46242943
Alignment:
Q  48 agtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaa 147  Q
    ||||||||||||||||||||||||||||| |||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  46243148 agtgtgtttggatgggggaatgttttgagagaattcaaatattt-gaggt-aattccattgtttggataataatttaaagaattttcaaaatgatggaaa 46243051  T
Q  148 tttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaatttt 247  Q
    |||| |||||||||| ||||||||||||||| ||||||| |||| || |||||||| ||| |||||||||||||||||||||||||  ||||||| ||||    
T  46243050 tttaagaagtattttattcaagttaaatttagagaatttaaaatgacatctaaaagctaataatttcaaaattcttcattgttatattttttcaattttt 46242951  T
Q  248 gcaatttg 255  Q
    ||| ||||    
T  46242950 gcattttg 46242943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 48 - 255
Target Start/End: Complemental strand, 52295098 - 52294891
Alignment:
Q  48 agtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaa 147  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||   ||||| |||||||||||||||||||| |||||||||||||||||||  ||    
T  52295098 agtgtgtttggatgggggaatgtttcgagggaattcaaatattttgagacgaatttcattgtttggataataatttgaagaattttcaaaatgatgagaa 52294999  T
Q  148 tttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaatttt 247  Q
    ||||||||||||| |||||||||||||| || |||||||||||| ||  ||||||| |||||| |||||||||||||||||||||||  |||||||||||    
T  52294998 tttatgaagtattgtgttcaagttaaatgtagagaatttcaaatgacacctaaaaggtaagaacttcaaaattcttcattgttataatctttcaaatttt 52294899  T
Q  248 gcaatttg 255  Q
    ||| ||||    
T  52294898 gcattttg 52294891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 66 - 259
Target Start/End: Original strand, 16516209 - 16516403
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggat-aataatttaaagaattttcaaaatgatggaaatttatgaagtattttgt 164  Q
    |||||||||| |||||| ||||| ||||||||||| |||||||||||||| || ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  16516209 aatgttttgaaggaatttaaatactttgatgtgaactccattgtttggattaagaatttgaagaattttcaaaatgatgaaaatttatgaagtattttgt 16516308  T
Q  165 tcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    |||||||||||||| |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||    
T  16516309 tcaagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgttataatctttcaaattttgcactttggtcc 16516403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 44 - 255
Target Start/End: Original strand, 54566188 - 54566402
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccatt---gtttggataataatttaaagaattttcaaaatg 140  Q
    ||||||||||||||||||   ||||||||||||||||||||| || ||||||||||| ||||||   ||||| |||||||||| ||   |||| ||||||    
T  54566188 taagagtgtgtttggatgaaagaatgttttgagggaattcaattactttgatgtgaaatccattattgtttgaataataatttgaaatttttttaaaatg 54566287  T
Q  141 atggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttc 240  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||| ||  || ||||||||||||||||||||||||||||||||||||||| |    
T  54566288 atcgaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatgacacctgaaagttaagaatttcaaaattcttcattgttataaatttac 54566387  T
Q  241 aaattttgcaatttg 255  Q
    |||||||||||||||    
T  54566388 aaattttgcaatttg 54566402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 68 - 259
Target Start/End: Original strand, 2125897 - 2126088
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  2125897 tgttttgagggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttca 2125996  T
Q  168 agttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||| |||||||||||| ||  ||||||  ||||||||||||| |||||||||||| | | |||||| |||||||| ||||||||    
T  2125997 agttaaatttagagaatttcaaatgacacctaaaaactaagaatttcaaatttcttcattgttgttatttttcatattttgcattttggtcc 2126088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 47 - 247
Target Start/End: Original strand, 4490052 - 4490246
Alignment:
Q  47 gagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaa 146  Q
    ||||| ||||||||| || ||||||||||||||||| |||||||||||     |||  ||||||||||||||||||||||||||||||||||||||||||    
T  4490052 gagtgagtttggatgagg-aatgttttgagggaatttaaatattttga-----attttattgtttggataataatttaaagaattttcaaaatgatggaa 4490145  T
Q  147 atttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattt 246  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||   ||||||||||||||||||||||||||||||||| ||  |||||||||||    
T  4490146 atttatgatgtattttgttcaagttaaatttagagaatttcaaattacacataaaagttaagaatttcaaaattcttcattgttctattttttcaaattt 4490245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 68 - 259
Target Start/End: Original strand, 35470162 - 35470353
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  35470162 tgttttgagggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttca 35470261  T
Q  168 agttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||| |||||||||||| ||  ||||||  ||||||||||||| ||||||||| || | | |||||| |||||||| ||||||||    
T  35470262 agttaaatttagagaatttcaaatgacacctaaaaactaagaatttcaaatttcttcattattgttatttttcatattttgcattttggtcc 35470353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 50 - 215
Target Start/End: Complemental strand, 40338303 - 40338138
Alignment:
Q  50 tgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatt 149  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  40338303 tgtgtttggatgagggaatgttttgatggaattcaaatactttgaggtgaatttcattgtttggataataatttacagaattttcaaaatgatggaaatt 40338204  T
Q  150 tatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttca 215  Q
    ||||||||||||| ||||||||||||||| | |||||||||| ||  |||||||||||| ||||||    
T  40338203 tatgaagtattttattcaagttaaatttagaaaatttcaaatgacacctaaaagttaagtatttca 40338138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 66 - 259
Target Start/End: Original strand, 41139511 - 41139704
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||||| |||||||||| ||| | |||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  41139511 aatgttttgaggaaattcaaatacttttaggtgaattctattgtttggataataatttaaagaatttttaaaatgatgaaaatttatgaagtattttgtt 41139610  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
     ||| |||||||| ||||||||||||  |  ||||||||||||||||||||| |||||  ||||||||  ||||||||||||||| ||||||||    
T  41139611 taagctaaatttagagaatttcaaatggcacctaaaagttaagaatttcaaacttcttatttgttatagtttttcaaattttgcattttggtcc 41139704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 48 - 191
Target Start/End: Original strand, 42775625 - 42775771
Alignment:
Q  48 agtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaa 147  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  42775625 agtgtgtttggatgggggaatgttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttaaataattttcaaaataatggaaa 42775724  T
Q  148 tttatgaagta---ttttgttcaagttaaatttaaagaatttcaaat 191  Q
    |||||||||||   |||||||||||||||||||| ||||||||||||    
T  42775725 tttatgaagtatttttttgttcaagttaaatttagagaatttcaaat 42775771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 64 - 247
Target Start/End: Original strand, 24705393 - 24705570
Alignment:
Q  64 ggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttg 163  Q
    ||||||||||||||||||| || || ||||||||||| |      |||| |||||||||| ||||||||| |||||||| |||||||||||| |||||||    
T  24705393 ggaatgttttgagggaatttaagtactttgatgtgaaat------tttgaataataatttgaagaatttttaaaatgatagaaatttatgaaatattttg 24705486  T
Q  164 ttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaatttt 247  Q
    |||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24705487 ttcaagttaaatttaaagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattcttataaattttcaaatttt 24705570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 46 - 256
Target Start/End: Original strand, 26534506 - 26534721
Alignment:
Q  46 agagtgtgtttggatgggggaatg-----ttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatg 140  Q
    ||||||||||||||||||||||||     ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||| ||||||||||||||||    
T  26534506 agagtgtgtttggatgggggaatgtaatgttttgagggaattcaaatactttgttgtgaattctattgtttggataataatttcaagaattttcaaaatg 26534605  T
Q  141 atggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttc 240  Q
    || |||||| ||||||||||||||| |||| ||||||| | ||||| |||| ||  ||||||| ||||||||||||||   ||  ||||||||| |||||    
T  26534606 atagaaattcatgaagtattttgtttaagtcaaatttagaaaatttgaaatgacacctaaaagctaagaatttcaaaaaattttgttgttataatttttc 26534705  T
Q  241 aaattttgcaatttgg 256  Q
    |||||||||| |||||    
T  26534706 aaattttgcattttgg 26534721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 94 - 259
Target Start/End: Complemental strand, 13318666 - 13318501
Alignment:
Q  94 atgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatta 193  Q
    |||||||||  ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||| |    
T  13318666 atgtgaattttattgtttggataataatttgaagaattttcaaaatgatagaaacttatgaagtattttgttcaagttaaatttagagaatttcaaatga 13318567  T
Q  194 cttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    |  ||||||  ||||||||| ||| |||||||||||||||| ||||||||||||||| ||||||||    
T  13318566 cacctaaaatctaagaatttgaaatttcttcattgttataatttttcaaattttgcattttggtcc 13318501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 66 - 259
Target Start/End: Original strand, 10354380 - 10354573
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||||  |||| |||||||| || ||||||||  || ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  10354380 aatgttttgagaaaattgaaatatttggaggtgaattctcttatttggataataatttgaagaattttcaaaatgatgggaatttatgaagtattttgtt 10354479  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||  |||| || |||||||||||| ||  ||||||  ||||||||||||| |||||||||||||||||||||  ||||||||| ||||||||    
T  10354480 caagacaaatatagagaatttcaaatgacacctaaaacctaagaatttcaaatttcttcattgttataaatttttgaattttgcagtttggtcc 10354573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 46 - 197
Target Start/End: Complemental strand, 40548273 - 40548122
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatgga 145  Q
    |||||||||||||||| |  |||||||||||| |||||||||| ||||  |||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  40548273 agagtgtgtttggatgagaaaatgttttgaggaaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatgga 40548174  T
Q  146 aatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttc 197  Q
    |||||| ||| |||||||||||||||||||||| ||||||||||||| ||||    
T  40548173 aatttaggaaatattttgttcaagttaaatttagagaatttcaaatttcttc 40548122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 98 - 259
Target Start/End: Original strand, 47108350 - 47108511
Alignment:
Q  98 gaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttc 197  Q
    ||||| |||||||| ||||| ||||| ||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||  |    
T  47108350 gaatttcattgtttagataacaatttgaagaatttttaaaacgatgaaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatgacacc 47108449  T
Q  198 taaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    |||||||||||||||||||||| ||||| |||| ||  ||||||||||||||| ||||||||    
T  47108450 taaaagttaagaatttcaaaatccttcactgttctattttttcaaattttgcattttggtcc 47108511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 96 - 259
Target Start/End: Complemental strand, 42776248 - 42776085
Alignment:
Q  96 gtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattact 195  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||| ||     
T  42776248 gtgaattccattgtttggataataatttgaagcattttcaaaatgatagaaatttatgaagtattttgtttaagttaaatttagagaatttcaaatgaca 42776149  T
Q  196 tctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
     ||||||| ||||||||| ||| |||||||||||| | | |||| | |||||||| ||||||||    
T  42776148 cctaaaagctaagaattttaaatttcttcattgttgttattttttatattttgcattttggtcc 42776085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 66 - 191
Target Start/End: Complemental strand, 46242579 - 46242454
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||| |||||  ||||| ||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  46242579 aatgttttgaaggaatcaaaatactttgaggtgaattccattgtttggagaataatttgaagaattttcaaaatgatggaaatttatgaagtattttgtt 46242480  T
Q  166 caagttaaatttaaagaatttcaaat 191  Q
    ||||||||||||| ||||||||||||    
T  46242479 caagttaaatttatagaatttcaaat 46242454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 58 - 225
Target Start/End: Complemental strand, 27284705 - 27284538
Alignment:
Q  58 gatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagt 157  Q
    ||||| |||||||||| || ||||||||||| ||||| ||||||| ||||||||| ||||| |||| || |||||| |||||||||||||||||||||||    
T  27284705 gatggaggaatgttttaagagaattcaaatactttgaggtgaatttcattgtttgtataatgatttgaataatttttaaaatgatggaaatttatgaagt 27284606  T
Q  158 attttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttca 225  Q
    ||||||||||||||||||||| |||||||||||| |  | ||||||  |||||||||||| |||||||    
T  27284605 attttgttcaagttaaatttagagaatttcaaatgatatttaaaagccaagaatttcaaatttcttca 27284538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 66 - 259
Target Start/End: Complemental strand, 19461771 - 19461583
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    ||||||||||| ||||||||||| |||||| | ||||| ||||||||||||||||| |  |||||||| | |||||||||||||||||||     || ||    
T  19461771 aatgttttgagcgaattcaaataatttgatataaattctattgtttggataataatatggagaatttttagaatgatggaaatttatgaa-----ttatt 19461677  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    |||||| |||||  | |||||||||| ||  ||||||||||||||||||||| ||||||||| |||||| ||||||||||| ||| ||||||||    
T  19461676 caagttcaattttgataatttcaaatgacacctaaaagttaagaatttcaaatttcttcattcttataatttttcaaatttggcattttggtcc 19461583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 42776675 - 42776800
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||||  |||||||||| ||| | ||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42776675 aatgttttgagtaaattcaaatacttttaggtgaatttcattgtttggatgataatttgaagaattttcaaaatgatggaaatttatgaagtattttgtt 42776774  T
Q  166 caagttaaatttaaagaatttcaaat 191  Q
    ||| ||||||||| | ||||||||||    
T  42776775 caaattaaatttagataatttcaaat 42776800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 71 - 250
Target Start/End: Original strand, 52493967 - 52494145
Alignment:
Q  71 tttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagt 170  Q
    |||||||||||| ||||||||| | ||||||| | |||||||||| |||||||  |||||||| |||| |||||||||| |||||||||||| |||||||    
T  52493967 tttgagggaattaaaatatttttaggtgaatttcgttgtttggatgataattttgagaatttttaaaaggatggaaatt-atgaagtattttcttcaagt 52494065  T
Q  171 taaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgca 250  Q
    |||||||| |||||||||||| ||  ||||||  ||| || ||||||  |||||||| |||||| |||||| ||||||||    
T  52494066 taaatttagagaatttcaaatgacacctaaaaactaaaaaattcaaatatcttcattcttataatttttcatattttgca 52494145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 74 - 258
Target Start/End: Original strand, 31947639 - 31947820
Alignment:
Q  74 gagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagta--ttttgttcaagtt 171  Q
    ||||||||||||||| |  || |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||  |||| || |||      
T  31947639 gagggaattcaaatact--gaggtgaattccattgtttggataataatttgaagaattttcaaaatgatagaaatttacgaagtattttttttttaagaa 31947736  T
Q  172 aaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtc 258  Q
    |||||||    ||||||||| ||  ||||||  ||||||||||||||||||||||| ||||||  |||||||||||||| |||||||    
T  31947737 aaattta---tatttcaaataacacctaaaatataagaatttcaaaattcttcattattataatctttcaaattttgcattttggtc 31947820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 48 - 188
Target Start/End: Complemental strand, 56118683 - 56118542
Alignment:
Q  48 agtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaa 147  Q
    ||||||||||||||| |||| ||||| || ||||| |||| |||||| ||||||| ||||||||| |||||||||| || ||||||||||||  ||||||    
T  56118683 agtgtgtttggatggaggaaagttttaagagaatttaaatgttttgaggtgaatttcattgtttgaataataatttgaataattttcaaaatagtggaaa 56118584  T
Q  148 tttatgaagtattttgttc-aagttaaatttaaagaatttca 188  Q
    ||||| ||||||||||||| |||||||||||||| |||||||    
T  56118583 tttataaagtattttgttctaagttaaatttaaaaaatttca 56118542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 97 - 248
Target Start/End: Original strand, 24062840 - 24062990
Alignment:
Q  97 tgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattactt 196  Q
    |||||||| ||| |||||| |||||||  ||||||||||||||||||||||||| |||||||||| || ||| ||||||||| |||||||||||| || |    
T  24062840 tgaattcctttgattggatgataattttgagaattttcaaaatgatggaaatttgtgaagtatttagtccaatttaaatttagagaatttcaaatgacat 24062939  T
Q  197 ctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttg 248  Q
    ||||| | ||||||||| ||| |||||| || ||| ||||||| ||||||||    
T  24062940 ctaaacgctaagaattttaaatttcttctttcttacaaatttt-aaattttg 24062990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 97 - 248
Target Start/End: Complemental strand, 29686080 - 29685929
Alignment:
Q  97 tgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattactt 196  Q
    ||||||| ||||||| ||| ||||||| ||   ||||||||||||||||||||||| |||||||||||||| ||| |||||| |||||||| ||| ||      
T  29686080 tgaattctattgtttagatgataatttgaatttttttcaaaatgatggaaatttataaagtattttgttcatgttgaatttagagaatttctaatgacac 29685981  T
Q  197 ctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttg 248  Q
    ||||||||||||||||||||| || |  |||  |||||||||||||||||||    
T  29685980 ctaaaagttaagaatttcaaatttatctattcctataaattttcaaattttg 29685929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 105 - 259
Target Start/End: Original strand, 30303172 - 30303326
Alignment:
Q  105 attgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagt 204  Q
    ||||||| ||| ||||| | ||||||||||||||| | | ||||||||||| ||||||| |||||||||||||| | |||||||||| |    |||||||    
T  30303172 attgtttagatgataatatgaagaattttcaaaataaagtaaatttatgaactattttgatcaagttaaatttagaaaatttcaaatgaggcataaaagt 30303271  T
Q  205 taagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||| | ||||||| ||||||||| |||| | |||||||||||| || ||||||||    
T  30303272 taaaattttcaaatttcttcattcttattatttttcaaattttacattttggtcc 30303326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 190
Target Start/End: Complemental strand, 16300254 - 16300129
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttca-aaatgatggaaatttatgaagtattttgt 164  Q
    |||||||||||  |||||||||| ||||| |||||||||||||||| ||||| ||||| |  ||||||   |||||||| ||||||||||||||||||||    
T  16300254 aatgttttgagaaaattcaaatactttgaggtgaattccattgttttgataacaatttcagaaattttttcaaatgatgaaaatttatgaagtattttgt 16300155  T
Q  165 tcaagttaaatttaaagaatttcaaa 190  Q
     |||||||||| || |||||||||||    
T  16300154 acaagttaaatatagagaatttcaaa 16300129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 66 - 141
Target Start/End: Original strand, 1539679 - 1539754
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatga 141  Q
    ||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||  ||||||||||||||||    
T  1539679 aatgttttgagggaattcaaatactttgaggtgaatttcattgtttggataataatttgtagaattttcaaaatga 1539754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 134 - 227
Target Start/End: Complemental strand, 13088692 - 13088599
Alignment:
Q  134 caaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcatt 227  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||| ||  ||||||| || |||||| ||| |||||||||    
T  13088692 caaaatgatgaaaatttatgaagtattttgttcaaattaaatttagagaatttcaaatgacacctaaaagataggaattttaaatttcttcatt 13088599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 21012633 - 21012566
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgttt 111  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||||||||||||||    
T  21012633 taagagtgtgtttggatggacgaatgttttgagggaatttaaatattttgaggtgaattccattgttt 21012566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 200 - 259
Target Start/End: Original strand, 42776264 - 42776323
Alignment:
Q  200 aaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  42776264 aaagttaagaatttcaaaattcttcattgttatatattttcaaattttgcattttggtcc 42776323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 114 - 192
Target Start/End: Original strand, 17727014 - 17727092
Alignment:
Q  114 ataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatt 192  Q
    |||||||| ||||||||||| ||||||||| ||||||||||| |||||||||||| || |||||| ||||||| |||||    
T  17727014 ataataatataaagaatttttaaaatgatgaaaatttatgaaatattttgttcaaattgaatttagagaattttaaatt 17727092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 46 - 112
Target Start/End: Complemental strand, 26251050 - 26250984
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttg 112  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||| |||||||| ||| ||||    
T  26251050 agagtgtgtttggatgggggaatgttttgagggaattcaactactttgaggtgaattctattatttg 26250984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 9451167 - 9451006
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    ||||||||||| || |||||||| ||| |  | ||||  ||||||||||| || |||| ||   |||| ||||||||  | |||||||||||||||| ||    
T  9451167 aatgttttgagagagttcaaatacttttagctaaattttattgtttggatgatgatttgaatttttttaaaaatgattaacatttatgaagtattttatt 9451068  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcatt 227  Q
    ||||||||||||  ||||| ||||||    ||||||||||||||| |||||| |||||||||    
T  9451067 caagttaaatttcgagaatatcaaatggtatctaaaagttaagaaattcaaatttcttcatt 9451006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 198 - 259
Target Start/End: Original strand, 17727560 - 17727621
Alignment:
Q  198 taaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||||||||||||||| |||||| |||||| ||||||||||||||| ||||||||    
T  17727560 taaaagttaagaatttcaaaatttttcattcttataatttttcaaattttgcattttggtcc 17727621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 107 - 191
Target Start/End: Original strand, 30303800 - 30303884
Alignment:
Q  107 tgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaat 191  Q
    ||||||||| ||  ||| ||||||||||||||| ||| |||||||||||||||||| | ||| ||||||||| ||||||||||||    
T  30303800 tgtttggatgattttttgaagaattttcaaaataatgaaaatttatgaagtattttatccaacttaaatttagagaatttcaaat 30303884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 14982422 - 14982363
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattc 103  Q
    ||||||||||||||||||||||||| |||||||||||||||| || ||||| ||||||||    
T  14982422 taagagtgtgtttggatgggggaatcttttgagggaattcaactactttgaggtgaattc 14982363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 4441468 - 4441412
Alignment:
Q  47 gagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattc 103  Q
    ||||||||||||||||||||||||||||||| ||||||| || ||||| ||||||||    
T  4441468 gagtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattc 4441412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 213
Target Start/End: Complemental strand, 18922547 - 18922460
Alignment:
Q  126 agaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaattt 213  Q
    ||||||||||| |||||  ||||||| ||| |||||||| ||||||||||||| |||||||||||| |  |||||||| || ||||||    
T  18922547 agaattttcaatatgatttaaatttacgaaatattttgtccaagttaaatttagagaatttcaaatgatatctaaaagctatgaattt 18922460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 36456091 - 36456050
Alignment:
Q  40 tctctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  36456091 tctctaagagtgtgtttggatggaggaatgttttgagggaat 36456050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 31742932 - 31742888
Alignment:
Q  37 atttctctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||    
T  31742932 atttctcaaagagtgtgtttggatggaggaatgttttgagggaat 31742888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 81
Target Start/End: Original strand, 31473849 - 31473884
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||||    
T  31473849 agagtgtgtttggatgggggaatgttttgagggaat 31473884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 81
Target Start/End: Original strand, 36455907 - 36455942
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||||    
T  36455907 agagtgtgtttggatgggggaatgttttgagggaat 36455942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 259
Target Start/End: Complemental strand, 46242447 - 46242400
Alignment:
Q  212 ttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||||||||||||||| ||||||||||||| | ||||||||    
T  46242447 ttcaaaattcttcattgttataatttttcaaattttgtattttggtcc 46242400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 46724263 - 46724208
Alignment:
Q  48 agtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattc 103  Q
    ||||||||||||||||| ||| |||||||||||||||| |||||||| ||| ||||    
T  46724263 agtgtgtttggatggggaaatattttgagggaattcaattattttgaggtggattc 46724208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 49111471 - 49111436
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||||    
T  49111471 agagtgtgtttggatgggggaatgttttgagggaat 49111436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 81
Target Start/End: Complemental strand, 857405 - 857363
Alignment:
Q  39 ttctctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||| ||||||||||||||||||| ||||||||||||||||    
T  857405 ttctcttagagtgtgtttggatggggaaatgttttgagggaat 857363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 77
Target Start/End: Original strand, 1112602 - 1112636
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagg 77  Q
    |||||||||||||||||||||||||||||||||||    
T  1112602 ctaagagtgtgtttggatgggggaatgttttgagg 1112636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 7352974 - 7352936
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  7352974 ctaagagtgtgtttggatggggaaatgttttgagggaat 7352936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 178
Target Start/End: Complemental strand, 13088732 - 13088694
Alignment:
Q  140 gatggaaatttatgaagtattttgttcaagttaaattta 178  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  13088732 gatggaaatttataaagtattttgttcaagttaaattta 13088694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 216
Target Start/End: Complemental strand, 33915612 - 33915502
Alignment:
Q  106 ttgtttggat--aataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaag 203  Q
    ||||||||||  |||||||  ||||||||| ||||||||| ||||  ||||||||| ||||| |  ||||||||| |||||||||||| || ||||||||    
T  33915612 ttgtttggatggaataattagaagaatttttaaaatgatgaaaat--atgaagtatcttgtttagattaaatttagagaatttcaaatgacatctaaaag 33915515  T
Q  204 ttaagaatttcaa 216  Q
     ||  ||||||||    
T  33915514 gtagaaatttcaa 33915502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 204
Target Start/End: Original strand, 36104891 - 36104989
Alignment:
Q  106 ttgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagt 204  Q
    |||||||||| || |||| ||||||||| |||||| |  ||||||   || |||||||||||||||| |||||  ||||||||||| || |||||||||    
T  36104891 ttgtttggatgattatttgaagaatttttaaaatggtaaaaattttataaatattttgttcaagttatatttagtgaatttcaaatgacatctaaaagt 36104989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 191
Target Start/End: Complemental strand, 39904759 - 39904638
Alignment:
Q  70 ttttgagggaattcaaatattttgatgtgaattccattgtttggataat-aatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaa 168  Q
    ||||||| ||||||||||  |||   || ||||||||||||| ||| || ||||| ||||||||||||||| ||  ||||||||||||| |||||| |||    
T  39904759 ttttgagagaattcaaatcatttatggtaaattccattgtttagatgattaatttgaagaattttcaaaattata-aaatttatgaagtgttttgtgcaa 39904661  T
Q  169 gttaaatttaaagaatttcaaat 191  Q
     ||||||||| | ||||| ||||    
T  39904660 tttaaatttagaaaatttgaaat 39904638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 51348587 - 51348648
Alignment:
Q  130 ttttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatt 192  Q
    |||| |||||||| |||||||||||| ||| ||||| ||||||||||| ||||||||||||||    
T  51348587 tttttaaaatgatagaaatttatgaaatatattgtttaagttaaattt-aagaatttcaaatt 51348648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 7352814 - 7352847
Alignment:
Q  48 agtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||    
T  7352814 agtgtgtttggatgggggaatgttttgagggaat 7352847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 115
Target Start/End: Original strand, 10633070 - 10633119
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    |||||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  10633070 aatgttatgagggaattcaaatactttgaggtgaatttcattgtttggat 10633119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 81
Target Start/End: Original strand, 10633035 - 10633067
Alignment:
Q  49 gtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||||||||||||||||||    
T  10633035 gtgtgtttggatgggggaatgttttgagggaat 10633067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 11041110 - 11041039
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    |||| ||||||||||| ||||| |||||||||||||||||||| || |||   |||||||| |||||||||||    
T  11041110 ctaatagtgtgtttggttgggg-aatgttttgagggaattcaactactttatggtgaattctattgtttggat 11041039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 81
Target Start/End: Original strand, 14982280 - 14982315
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||| ||||||||||||||||||    
T  14982280 agagtgtgtttggatggaggaatgttttgagggaat 14982315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 15660342 - 15660307
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||| |||||||||||||||||||    
T  15660342 agagtgtgtttggatgagggaatgttttgagggaat 15660307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 28846030 - 28845995
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||| ||||||||||||||||    
T  28846030 agagtgtgtttggatggggaaatgttttgagggaat 28845995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 81
Target Start/End: Original strand, 4441338 - 4441372
Alignment:
Q  47 gagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||| ||||||||||||||||||    
T  4441338 gagtgtgtttggatggtggaatgttttgagggaat 4441372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Complemental strand, 4896798 - 4896756
Alignment:
Q  39 ttctctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||| ||||||||||||||||| ||| ||||||||||||    
T  4896798 ttctctaatagtgtgtttggatggggaaatattttgagggaat 4896756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 12914139 - 12914093
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaatatttt 92  Q
    |||||||||||||||| |  |||||||||||||||||||| ||||||    
T  12914139 agagtgtgtttggatgagaaaatgttttgagggaattcaactatttt 12914093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 115
Target Start/End: Original strand, 31473887 - 31473936
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    |||||| |||||||||||||||| ||||| |||||||  |||||||||||    
T  31473887 aatgttatgagggaattcaaatactttgaggtgaattttattgtttggat 31473936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 31947588 - 31947625
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  31947588 taagagtatgtttggatgggagaatgttttgagggaat 31947625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 41498651 - 41498614
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  41498651 taagagtgtgtttggatggaggaatattttgagggaat 41498614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 42543024 - 42542991
Alignment:
Q  48 agtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||| ||||||||||||||||||    
T  42543024 agtgtgtttggatggtggaatgttttgagggaat 42542991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 42844541 - 42844578
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  42844541 taagagtgtgtatagatgggggaatgttttgagggaat 42844578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 49111433 - 49111396
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattc 103  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  49111433 aatgttttgagggaattcaactattttgaggtgaattc 49111396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 15660178 - 15660214
Alignment:
Q  41 ctctaagagtgtgtttggatgggggaatgttttgagg 77  Q
    |||||||||||||||||||| ||||||| ||||||||    
T  15660178 ctctaagagtgtgtttggataggggaatattttgagg 15660214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 165; Significance: 2e-88; HSPs: 84)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 44 - 256
Target Start/End: Original strand, 2104750 - 2104962
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatg 143  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  2104750 taagagtgtgtttggataggggaatgtttcgagggaattcaaatactttgatgtgaattctattgtttggataataatttgaagaattttcaaaatgatg 2104849  T
Q  144 gaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaa 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||||| || |||||    
T  2104850 gaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaatgacacctaaaagttaagaaattcaaaattcttcattgttataatttatcaaa 2104949  T
Q  244 ttttgcaatttgg 256  Q
    ||||||| |||||    
T  2104950 ttttgcattttgg 2104962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 66 - 259
Target Start/End: Original strand, 7976586 - 7976779
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||| |||||| |||||  |||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7976586 aatgttttgaaggaatttaaatacattgaggtgaattctattgtttggataataatttaaagaatttttaaaatgatggaaatttatgaagtattttgtt 7976685  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||||| |||||||||||| ||  |||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  7976686 caagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgttatattttttcaaattttgcattttggtcc 7976779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 73 - 259
Target Start/End: Original strand, 31021724 - 31021911
Alignment:
Q  73 tgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaatttt-caaaatgatggaaatttatgaagtattttgttcaagtt 171  Q
    |||||||||||||||| |||||||||||||| |||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  31021724 tgagggaattcaaatactttgatgtgaattctattgtttgcataataatttgaagaatttttcaaaatgatggaaatttatgaagtattttgtccaagtt 31021823  T
Q  172 aaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||| |||||||||| ||  |||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||    
T  31021824 aaatttaaaaaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgttataatttttcaaattttacattttggtcc 31021911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 47 - 225
Target Start/End: Complemental strand, 38506929 - 38506751
Alignment:
Q  47 gagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaa 146  Q
    |||||||||||||| | ||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  38506929 gagtgtgtttggatagaggaatgttttgagggaattcaaataatttgaggtgaattccattgtttgaataataatttgaagaattttcaaaatgatggaa 38506830  T
Q  147 atttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttca 225  Q
    |||||| ||||||||||||||||||||| |||||||||||||||| ||  |||||| ||||||||||||||||||||||    
T  38506829 atttataaagtattttgttcaagttaaaattaaagaatttcaaatgacacctaaaacttaagaatttcaaaattcttca 38506751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 106 - 259
Target Start/End: Original strand, 26547093 - 26547246
Alignment:
Q  106 ttgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagtt 205  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||  |||||||||    
T  26547093 ttgttcggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaagtt 26547192  T
Q  206 aagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26547193 aagaatttcaaaattcttcattgttataaattttcaaattttgcattttggtcc 26547246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 43 - 259
Target Start/End: Complemental strand, 43864007 - 43863792
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgat 142  Q
    |||||||||| ||||||||  |||||  |||||||||||||||||| ||||  |||||||||||||||||||||||||||| ||| ||||||||||||||    
T  43864007 ctaagagtgtctttggatgaaggaattatttgagggaattcaaatactttgg-gtgaattccattgtttggataataatttgaagcattttcaaaatgat 43863909  T
Q  143 ggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaa 242  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||  ||||||  ||||||||||||| |||||||||||| | | ||||||     
T  43863908 ggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaaactaagaatttcaaatttcttcattgttgttatttttcat 43863809  T
Q  243 attttgcaatttggtcc 259  Q
    |||||||| ||||||||    
T  43863808 attttgcattttggtcc 43863792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 66 - 259
Target Start/End: Original strand, 47767470 - 47767663
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||| ||||||||||||  |||| ||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  47767470 aatgttttgaaggaattcaaataccttgaggtgaattacattgtttggataatagtttgaagaattttcaaaatgatggaaatttatgaagtattttgtt 47767569  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||| |||||| || |||||||||||| ||  ||||||||||||||||||||||||||||||||| |||  |||||||||||| || ||||||||    
T  47767570 caaattaaatgtagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgtcatattttttcaaattttccattttggtcc 47767663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 66 - 259
Target Start/End: Complemental strand, 53129877 - 53129684
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||| |||||||||||||| ||||  |||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||    
T  53129877 aatgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaagtattttcaaaatgatgaaaatttatgaagtattttgtt 53129778  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||||| |||||||||||| ||  ||||||| ||||||||||||| |||||||||||| | | |||||| |||||||| ||||||||    
T  53129777 caagttaaatttagagaatttcaaatgacacctaaaagctaagaatttcaaatttcttcattgttgttatttttcatattttgcattttggtcc 53129684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 68 - 259
Target Start/End: Original strand, 48947645 - 48947836
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    ||||||||| ||||||||||| ||||  |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  48947645 tgttttgagagaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttca 48947744  T
Q  168 agttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||| |||||||||||| ||  ||||||| ||||||||||||| |||||||||||| | | |||||| ||||| || ||||||||    
T  48947745 agttaaatttagagaatttcaaatgacacctaaaagctaagaatttcaaatttcttcattgttgttatttttcatattttccattttggtcc 48947836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 66 - 259
Target Start/End: Original strand, 37054432 - 37054625
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||| ||||||||||||  |||| ||||||| |||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  37054432 aatgttttgaaggaattcaaataccttgaggtgaatttcattgtttgggtaatagtttgaagaattttcaaaatgatggaaatttatgaagtattttgtt 37054531  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    |||||||||| || |||||||||||| ||  |||||||||||||||||||||| |||||||||| |||  |||||||||||| || ||||||||    
T  37054532 caagttaaatgtagagaatttcaaatgacacctaaaagttaagaatttcaaaaatcttcattgtcatattttttcaaattttacattttggtcc 37054625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 37 - 190
Target Start/End: Complemental strand, 47284266 - 47284113
Alignment:
Q  37 atttctctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaa 136  Q
    ||||| || |||||||||||||||| |||||| ||||||||||||||||||| |||||| |||||||||||||||| |||||||||| ||||||||||||    
T  47284266 atttcccttagagtgtgtttggatgagggaatattttgagggaattcaaatactttgatatgaattccattgtttgaataataatttgaagaattttcaa 47284167  T
Q  137 aatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaa 190  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  47284166 aatgatggaaatttatgaagtattttattcaagttaaatttaaagaatttcaaa 47284113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 68 - 259
Target Start/End: Complemental strand, 36398021 - 36397830
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    ||||||||||||||||||||| ||||  ||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  36398021 tgttttgagggaattcaaatactttggggtgaattccattgttcggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttca 36397922  T
Q  168 agttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||| |||||||||||| ||  ||||||  ||||||||||||| |||||||||||| | | |||| | |||||||| ||||||||    
T  36397921 agttaaatttagagaatttcaaatgacacctaaaaactaagaatttcaaatttcttcattgttgttatttttaatattttgcattttggtcc 36397830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 68 - 259
Target Start/End: Original strand, 34088611 - 34088802
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    ||||||||||||||||||||| ||||  ||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  34088611 tgttttgagggaattcaaatactttggggtgaattccattgttaggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttca 34088710  T
Q  168 agttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    | ||||||||| |||||||||||| ||  ||||||  ||||||||||||| ||||||||| || | | |||||| |||||||| ||||||||    
T  34088711 aattaaatttagagaatttcaaatgacacctaaaaactaagaatttcaaatttcttcattattgttatttttcatattttgcattttggtcc 34088802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 77 - 259
Target Start/End: Original strand, 52527085 - 52527268
Alignment:
Q  77 ggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatt 176  Q
    |||||||||||| ||||| || ||||||||||||||| | ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  52527085 ggaattcaaatactttgaggtaaattccattgtttggttgataatttgaagaattttcaaaataatggaaatttatgaagtattttgttcaagttaaatt 52527184  T
Q  177 taaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataa-attttcaaattttgcaatttggtcc 259  Q
    || |||||||||||| ||  |||||||  |||||||||||||||||||||||||||||  |||| |||||||||| ||||||||    
T  52527185 tagagaatttcaaatgacacctaaaaggaaagaatttcaaaattcttcattgttataatctttttaaattttgcattttggtcc 52527268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 44 - 259
Target Start/End: Original strand, 55460356 - 55460567
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatg 143  Q
    |||||| |||||||||||  ||||||||||||||||||||||||| ||  | ||||||||||| |||||||| ||||||   ||||||||||||||||||    
T  55460356 taagagcgtgtttggatgtaggaatgttttgagggaattcaaatacttgtaagtgaattccatcgtttggatgataattaggagaattttcaaaatgatg 55460455  T
Q  144 gaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaa 243  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||| ||    | ||| ||||||||||||  ||||||||| |||||| ||||||||    
T  55460456 gaaatttacgaagtattttgttcaagttaattttaaagaatttcaaatgac----acaagctaagaatttcaattttcttcattcttataatttttcaaa 55460551  T
Q  244 ttttgcaatttggtcc 259  Q
    ||||||| ||||||||    
T  55460552 ttttgcattttggtcc 55460567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 66 - 259
Target Start/End: Complemental strand, 42005987 - 42005794
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||| |||||| |||||  |||| ||||||| |||||||||| ||||| ||| ||||||||||||||||||| |||||||||||||||||||||    
T  42005987 aatgttttgaaggaatttaaataccttgaggtgaatttcattgtttgggtaatagtttgaagaattttcaaaatgatgaaaatttatgaagtattttgtt 42005888  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    |||||||||| || |||||||||||| ||  ||||||||||||||||||||||||||||||||| ||   |||||||||||| || ||||||||    
T  42005887 caagttaaatgtagagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgtcatgttttttcaaattttacattttggtcc 42005794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 66 - 250
Target Start/End: Original strand, 21730940 - 21731123
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||| ||||||||||||||| ||  |||||| ||||||||| ||||||||||||| |||||| ||||||||||||||||||||| |||||||||    
T  21730940 aatgttttgaaggaattcaaatattt-gagatgaatttcattgtttgaataataatttaaacaatttttaaaatgatggaaatttatgaactattttgtt 21731038  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgca 250  Q
    ||||||||||||| |||||||||||| || ||||||| |||||||||| ||| |||||||||||||||| |||| | ||||||||    
T  21731039 caagttaaatttagagaatttcaaatgacatctaaaacttaagaattttaaatttcttcattgttataattttttagattttgca 21731123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 68 - 259
Target Start/End: Complemental strand, 53470461 - 53470269
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    ||||||||||||||||||||| ||||  ||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  53470461 tgttttgagggaattcaaatactttggggtgaatttcattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttca 53470362  T
Q  168 agttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgtt-ataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||| |||||||||||| ||  ||||||  ||||||||| ||| ||||||||||||  ||  |||||| |||||||| ||||||||    
T  53470361 agttaaatttagagaatttcaaatgacacctaaaaactaagaattttaaatttcttcattgttgttattttttcatattttgcattttggtcc 53470269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 7302384 - 7302547
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||| |||||||| |||  |||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  7302384 aatgttttgaaggaattcagataccttgaggtgaattccattgtttggataatagtttgaagaattttcaaaatgatggaaatttatgaagtattttgtt 7302483  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgt 229  Q
    ||||||||||  | ||||||| |||| ||  |||||||||||||||||||||||||||||||||    
T  7302484 caagttaaatgcagagaatttaaaatgacacctaaaagttaagaatttcaaaattcttcattgt 7302547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 66 - 217
Target Start/End: Complemental strand, 21307566 - 21307415
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||  | ||||||||||||||| ||||||||||||||||||| ||    
T  21307566 aatgttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttgtaaaattttcaaaatgatagaaatttatgaagtattttatt 21307467  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaa 217  Q
    ||||||||||||| |||||||||||| ||  |||||||||||||||||||||    
T  21307466 caagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaa 21307415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 68 - 230
Target Start/End: Complemental strand, 671651 - 671489
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    ||||||||||||||||| ||| ||||  |||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  671651 tgttttgagggaattcagatactttggggtgaattccattgtttgggtaataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttca 671552  T
Q  168 agttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgtt 230  Q
    ||||||||||| |||||||||||| || |||||||  ||||||||||||| || |||||||||    
T  671551 agttaaatttagagaatttcaaatgacatctaaaaactaagaatttcaaattttttcattgtt 671489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 43 - 197
Target Start/End: Complemental strand, 35279977 - 35279825
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgat 142  Q
    |||||| ||||||||||||||||||||||||||||||||  || | |||||| ||||||| |||||||||||||||||||| ||||||||||||||||||    
T  35279977 ctaagaatgtgtttggatgggggaatgttttgagggaatgtaa-tgttttga-gtgaattacattgtttggataataatttgaagaattttcaaaatgat 35279880  T
Q  143 ggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttc 197  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  35279879 ggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatttcttc 35279825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 78 - 259
Target Start/End: Complemental strand, 6837081 - 6836900
Alignment:
Q  78 gaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaattt 177  Q
    ||||||||||| |||||  |||| | ||||||||| |||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  6837081 gaattcaaatagtttgagttgaaattcattgtttgaataataatttgaagaattttcaaaatgatagaaatttatgaagcattttgttcaagttaaattt 6836982  T
Q  178 aaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    | |||||||||||| ||  |||||| ||||||||| ||||||||||||||||||||| | |||||||||| || ||||||||    
T  6836981 agagaatttcaaatgacacctaaaaattaagaattacaaaattcttcattgttataattgttcaaatttttcattttggtcc 6836900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 30766591 - 30766752
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||| ||||||||||||  |||| |||||||||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||||||||    
T  30766591 aatgttttgaaggaattcaaataccttgaggtgaattccattgtttggataatagtttgaagaattttcaaaaagatagaaatttatgaagtattttgtt 30766690  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcatt 227  Q
    |||||||||| ||  ||||||||||| ||  |||||||||||||||||||||||||||||||    
T  30766691 caagttaaatgtagtgaatttcaaatgacacctaaaagttaagaatttcaaaattcttcatt 30766752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 66 - 228
Target Start/End: Original strand, 47336919 - 47337081
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||||  |||| |||||| || | |||||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||    
T  47336919 aatgttttgagataatttaaatatgtttaggtgaattccattgtttggatgataatttatagaattttaaaaatgatagaaatttatgaagtattttgtt 47337018  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattg 228  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| ||| ||| ||||||||||    
T  47337019 caagttaaatttagagaatttcaaatgacttctaaaagttaagatttttaaatttcttcattg 47337081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 66 - 225
Target Start/End: Original strand, 46706688 - 46706849
Alignment:
Q  66 aatgttttgagggaattc--aaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttg 163  Q
    ||||||| ||| ||||||  ||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  46706688 aatgtttcgagagaattcttaaatactttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttt 46706787  T
Q  164 ttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttca 225  Q
    ||||||||||||||| |||||||||||| |   ||||||||||||||||| | |||||||||    
T  46706788 ttcaagttaaatttagagaatttcaaatgatacctaaaagttaagaatttaataattcttca 46706849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 64 - 192
Target Start/End: Original strand, 26323392 - 26323520
Alignment:
Q  64 ggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttg 163  Q
    |||||||||||||| |||||||||| ||| | ||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  26323392 ggaatgttttgaggtaattcaaatacttttaggtgaattccgttgtttggataataatttataggattttcaaaatgatggaaatttatgaagtattttg 26323491  T
Q  164 ttcaagttaaatttaaagaatttcaaatt 192  Q
    ||||||| ||||||| |||||||||||||    
T  26323492 ttcaagtcaaatttagagaatttcaaatt 26323520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 75 - 255
Target Start/End: Complemental strand, 34396532 - 34396355
Alignment:
Q  75 agggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaa 174  Q
    |||||||||||||| ||||| || |||| |||| ||||||| ||||||| ||||   ||||||||||||| |||||||||||||||||||||||||||||    
T  34396532 agggaattcaaatactttgaggtaaatttcattctttggatgataatttgaaga---ttcaaaatgatgggaatttatgaagtattttgttcaagttaaa 34396436  T
Q  175 tttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttg 255  Q
    |||| |||||||||||| ||  ||||||| ||||||||| ||||||||||| ||||||||  ||| |||||||||| ||||    
T  34396435 tttagagaatttcaaatgacacctaaaaggtaagaatttaaaaattcttcactgttataatcttttaaattttgcattttg 34396355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 96 - 245
Target Start/End: Complemental strand, 15760486 - 15760337
Alignment:
Q  96 gtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattact 195  Q
    |||||||  |||||| |||||||||| | | ||| ||| | |||||||||||||||| |||||||||||||| |||||||||||||| |||||||| ||     
T  15760486 gtgaattatattgttcggataataatatcaggaacttttataatgatggaaatttattaagtattttgttcaggttaaatttaaagattttcaaatgaca 15760387  T
Q  196 tctaaaagttaagaatttcaaaattcttcattgttataaattttcaaatt 245  Q
    |||||||||||||||||||||| |||||||||||||||| ||||| ||||    
T  15760386 tctaaaagttaagaatttcaaatttcttcattgttataatttttctaatt 15760337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 73 - 259
Target Start/End: Complemental strand, 28182275 - 28182087
Alignment:
Q  73 tgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttc---aaaatgatggaaatttatgaagtattttgttcaag 169  Q
    |||||||||||||||| ||||| |||||||  |||||||||| || |||||||    ||||    |||||||||||||||||||||||| || |||||||    
T  28182275 tgagggaattcaaatactttgaggtgaattttattgtttggaaaacaatttaattttttttttttaaaatgatggaaatttatgaagtactt-gttcaag 28182177  T
Q  170 ttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||| ||||||||||   ||  |||||||||||||||||||||||||||||||||||||  | ||||||||||||| ||||||||    
T  28182176 ttaaatttagagaatttcaatagacacctaaaagttaagaatttcaaaattcttcattgttatatttgttcaaattttgcattttggtcc 28182087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 46635927 - 46636063
Alignment:
Q  109 tttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaag 208  Q
    |||| ||||||||||  |||||||||||||||||| |||||||||||| |||||||| |||||||||||| |||||||||||| ||  ||||||| ||||    
T  46635927 tttgaataataatttggagaattttcaaaatgatgaaaatttatgaagcattttgtttaagttaaatttagagaatttcaaatgacacctaaaagctaag 46636026  T
Q  209 aatttcaaaattcttcattgttataaattttcaaatt 245  Q
    ||||||||| ||||||||  |||||| ||||||||||    
T  46636027 aatttcaaatttcttcatacttataatttttcaaatt 46636063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 66 - 239
Target Start/End: Complemental strand, 31189431 - 31189258
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    ||||||||||| ||||||||||| ||||| || ||||  || |||||| | |||||||||| |||||| || |||||||||| |||||||||||||||||    
T  31189431 aatgttttgagagaattcaaatactttgaggtaaattttatcgtttgggtgataatttaaataatttttaagatgatggaaacttatgaagtattttgtt 31189332  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaatttt 239  Q
     |||||||||||| |||||||||||| ||  || |||  || ||| |||||| ||||||||| |||||||||||    
T  31189331 taagttaaatttatagaatttcaaataacaccttaaatctatgaaattcaaatttcttcatttttataaatttt 31189258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 146 - 259
Target Start/End: Original strand, 30767412 - 30767526
Alignment:
Q  146 aatttatgaagtattttgttcaagttaaatttaaaga--atttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaa 243  Q
    ||||||||||||||||||||||||||||||||| |||  ||||||||| ||  ||||||| |||||||||||||||||||||||||||||| ||||||||    
T  30767412 aatttatgaagtattttgttcaagttaaatttatagagaatttcaaatgacacctaaaagctaagaatttcaaaattcttcattgttataatttttcaaa 30767511  T
Q  244 ttttgcaatttggtcc 259  Q
    |||||| |||||||||    
T  30767512 ttttgc-atttggtcc 30767526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 44 - 232
Target Start/End: Original strand, 36635893 - 36636086
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataattta-----aagaattttcaaaa 138  Q
    ||||| ||||| ||||||| ||||| |||||||||| ||||||||| || |  ||||||  ||| |||| || || | |||     || |||||| ||||    
T  36635893 taagaatgtgtatggatggtggaatattttgagggatttcaaatatctttagatgaattatattatttgaatgattagttacattgaataatttttaaaa 36635992  T
Q  139 tgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttat 232  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||  |||| ||  ||||||||||||||||||||| ||||||||| ||||    
T  36635993 tgatggaaatttatgaaggattttgttcaagttaaatttagagaattataaatgacacctaaaagttaagaatttcaaatttcttcattattat 36636086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 174
Target Start/End: Complemental strand, 50168644 - 50168536
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||||| || ||||||| ||| |  ||||||||||||||||||||||||| |  ||||||||||||| |||||||||| ||||||| |||||||    
T  50168644 aatgttttgaggaaactcaaataattttagctgaattccattgtttggataataatatggagaattttcaaaaggatggaaattaatgaagttttttgtt 50168545  T
Q  166 caagttaaa 174  Q
    |||||||||    
T  50168544 caagttaaa 50168536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 54761620 - 54761549
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  54761620 taagagtgtgtttggatggaggaatgttttgagggaattcaaatactttgatgtaaattccattgtttggat 54761549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 30767173 - 30767239
Alignment:
Q  96 gtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtatttt 162  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  30767173 gtgaattccattgtttgggtaataatttgaagaattttcaaaatgatggaaatttatgaagtatttt 30767239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 66 - 217
Target Start/End: Complemental strand, 44288493 - 44288342
Alignment:
Q  66 aatgttttgagggaattcaaata-ttttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgt 164  Q
    |||||||||| |||||||||||| ||||||   ||||| |||| ||||||| |||||||  ||||| || |||||  || ||||||||||||||||||||    
T  44288493 aatgttttgatggaattcaaatacttttgaac-gaattacattatttggatgataatttggagaatctttaaaatattgaaaatttatgaagtattttgt 44288395  T
Q  165 tcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaa 217  Q
    |||||||||||||| | |||||||||| ||  | ||||| |||||||||||||    
T  44288394 tcaagttaaatttagataatttcaaatgacaccaaaaagctaagaatttcaaa 44288342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 44 - 123
Target Start/End: Complemental strand, 9007511 - 9007432
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataattt 123  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| ||| | ||||||| ||||||||||||||||||||    
T  9007511 taagagtgtgtttggatgggggaatgttttgaacgaattcaaatacttttaggtgaatttcattgtttggataataattt 9007432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 218
Target Start/End: Complemental strand, 1146926 - 1146827
Alignment:
Q  118 taatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaa 217  Q
    |||||| |||||||||||||||||| || ||||||||||||||| ||  |||||||||||| |||||||||||| || |||||||| || ||||||||||    
T  1146926 taatttgaagaattttcaaaatgatagatatttatgaagtattt-gtcgaagttaaatttagagaatttcaaatgacatctaaaagctatgaatttcaaa 1146828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 48825110 - 48825022
Alignment:
Q  117 ataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagtt 205  Q
    ||||||| ||||||||| ||||||||  |||||||| || ||||||||||||||||||||||||||||||||| | || ||||||||||    
T  48825110 ataatttgaagaatttttaaaatgataaaaatttataaaatattttgttcaagttaaatttaaagaatttcaactgacatctaaaagtt 48825022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 97 - 191
Target Start/End: Complemental strand, 1796233 - 1796139
Alignment:
Q  97 tgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaat 191  Q
    |||||| ||||||| | ||||| |||| | ||||||| ||||||||| |||||||| ||||||||| || |||||||||||||||||||||||||    
T  1796233 tgaatttcattgttcgaataatgatttgatgaatttttaaaatgatgaaaatttataaagtattttatttaagttaaatttaaagaatttcaaat 1796139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 28092362 - 28092289
Alignment:
Q  39 ttctctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttg 112  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||| | |||||| |||||||| ||||||||    
T  28092362 ttctctaagagtgtgtttaaatgggggaatgttttgagggaattcaactgttttgaggtgaattctattgtttg 28092289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 46429409 - 46429480
Alignment:
Q  41 ctctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttg 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||| || ||| | |||||||| ||||||||    
T  46429409 ctcttagagtgtgtttggatgggggaatgttttgagggaattcaactactttaaggtgaattctattgtttg 46429480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 46 - 115
Target Start/End: Original strand, 47714287 - 47714357
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaata-ttttgatgtgaattccattgtttggat 115  Q
    |||||||| ||||||||  |||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  47714287 agagtgtgcttggatggatgaatgttttgagggaattcaaatacttttgatgtgaatttcattgtttggat 47714357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 259
Target Start/End: Original strand, 40493140 - 40493300
Alignment:
Q  99 aattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttct 198  Q
    ||||| ||| ||||||| |||||||  ||||| || ||| | ||| ||||||||||| ||||||||||| ||| |||||| || ||||||||| ||  ||    
T  40493140 aattctattatttggatgataatttggagaatgtttaaagtaatgaaaatttatgaactattttgttcatgttcaatttagagtatttcaaatgacacct 40493239  T
Q  199 aaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    |||| |||  ||||||||| |||||  || |||||| |||||||| ||| ||| |||||||    
T  40493240 aaaaattagaaatttcaaatttcttacttcttataatttttcaaaatttacaagttggtcc 40493300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 247
Target Start/End: Original strand, 46999809 - 46999958
Alignment:
Q  99 aattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttc- 197  Q
    |||| |||||||||||| |||||||  |||||||| ||||| ||  ||||||||||| ||||||||| ||||||  ||| | | ||||||||| |  ||     
T  46999809 aattacattgtttggatgataatttggagaattttaaaaataataaaaatttatgaattattttgtttaagttaggttt-acggatttcaaataaaatct 46999907  T
Q  198 -taaaagttaagaatttcaaaattcttcattgttataaattttcaaatttt 247  Q
     |||||||||||||||||||| || |||||| |||||| | ||||||||||    
T  46999908 ataaaagttaagaatttcaaatttattcattcttataattgttcaaatttt 46999958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 224
Target Start/End: Original strand, 32665975 - 32666081
Alignment:
Q  118 taatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaa 217  Q
    |||||| ||||||||| |||||| || ||||||||||||||||||||  |||||||||||  ||||||| ||||  |  ||||||||||  |||||||||    
T  32665975 taatttgaagaatttttaaaatgctgaaaatttatgaagtattttgtcaaagttaaattttgagaatttgaaatgtcacctaaaagttagaaatttcaaa 32666074  T
Q  218 attcttc 224  Q
     ||||||    
T  32666075 tttcttc 32666081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 115
Target Start/End: Original strand, 8762164 - 8762213
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  8762164 aatgttatgagggaattcaaatactttgatgtgaattccattgtttggat 8762213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 191
Target Start/End: Original strand, 20634287 - 20634371
Alignment:
Q  107 tgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaat 191  Q
    ||||| ||| |||| || ||||| ||| |||||||| ||||| |||||| |||||||| ||||||||||||| ||||||||||||    
T  20634287 tgttttgatgataactttaagaaattttaaaatgattgaaatctatgaattattttgtacaagttaaatttagagaatttcaaat 20634371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 332118 - 332051
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgttt 111  Q
    |||||||||||||||||||  ||||||||||||||||||||| || ||| | |||||||| |||||||    
T  332118 taagagtgtgtttggatggaagaatgttttgagggaattcaactactttaaggtgaattctattgttt 332051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 25655445 - 25655399
Alignment:
Q  39 ttctctaagagtgtgtttggatgggggaatgttttgagggaattcaa 85  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||    
T  25655445 ttctctaagagtgtgtttggatggggaaatgttttgacggaattcaa 25655399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 27485474 - 27485520
Alignment:
Q  48 agtgtgtttggatgggggaatgttttgagggaattcaaatattttga 94  Q
    |||||||||||||||||||||||||||||||||||||| || |||||    
T  27485474 agtgtgtttggatgggggaatgttttgagggaattcaactactttga 27485520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 42006028 - 42005990
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||||||||||||||||||||||||    
T  42006028 ctaagagtgtgtttggatgggggaatgttttgagggaat 42005990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 44436255 - 44436293
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||||||||||||||||||||||||    
T  44436255 ctaagagtgtgtttggatgggggaatgttttgagggaat 44436293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 49457340 - 49457378
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||||||||||||||||||||||||    
T  49457340 ctaagagtgtgtttggatgggggaatgttttgagggaat 49457378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 25655315 - 25655372
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattc 103  Q
    ||||||||||||||||||| |||||||||||||||||||| || |||||  |||||||    
T  25655315 agagtgtgtttggatggggaaatgttttgagggaattcaactactttgagttgaattc 25655372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 259
Target Start/End: Complemental strand, 35279842 - 35279790
Alignment:
Q  207 agaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||| |||||| ||||||||| ||||||||||||||| ||||||||    
T  35279842 agaatttcaaatttcttcgttgttataatttttcaaattttgcattttggtcc 35279790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 37321659 - 37321619
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaattca 84  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  37321659 taagagtgtgtttggattggggaatgttttgagggaattca 37321619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 179
Target Start/End: Complemental strand, 25547442 - 25547368
Alignment:
Q  104 cattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaa 179  Q
    |||| ||||||| |||||||  |||||||| ||||| || |||||| ||||||||||||||| |||||||||||||    
T  25547442 cattatttggatgataatttgtagaatttttaaaataattgaaatt-atgaagtattttgtttaagttaaatttaa 25547368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 36398061 - 36398026
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||||    
T  36398061 agagtgtgtttggatgggggaatgttttgagggaat 36398026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 46199241 - 46199296
Alignment:
Q  125 aagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaa 180  Q
    ||||||||| |||||||| ||||||||| ||||||||||| ||| |||||||||||    
T  46199241 aagaatttttaaaatgattgaaatttataaagtattttgtccaaattaaatttaaa 46199296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 46672875 - 46672840
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||||    
T  46672875 agagtgtgtttggatgggggaatgttttgagggaat 46672840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 81
Target Start/End: Original strand, 47767432 - 47767467
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||||    
T  47767432 agagtgtgtttggatgggggaatgttttgagggaat 47767467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 27251916 - 27251978
Alignment:
Q  50 tgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttg 112  Q
    |||||||||||||||||||||||| ||||||||||| || ||| |  ||||||| ||||||||    
T  27251916 tgtgtttggatgggggaatgttttaagggaattcaactactttaagttgaattctattgtttg 27251978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 27252056 - 27252018
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  27252056 ctaagagtgtgtttggatggggggatgttttgagggaat 27252018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 46 - 80
Target Start/End: Original strand, 44692822 - 44692856
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaa 80  Q
    |||||||||||||||||||||||||||||||||||    
T  44692822 agagtgtgtttggatgggggaatgttttgagggaa 44692856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 44692984 - 44692946
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  44692984 ctaagagtgtgtttggatggaggaatgttttgagggaat 44692946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 45097671 - 45097725
Alignment:
Q  129 attttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaa 183  Q
    ||||| ||||| |||||||||| |||| |||||||| ||||||||||||||||||    
T  45097671 atttttaaaattatggaaatttctgaaatattttgtccaagttaaatttaaagaa 45097725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 45098239 - 45098293
Alignment:
Q  130 ttttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaat 184  Q
    |||| |||| |||| |||||||||||||||||||||| ||||||||| |||||||    
T  45098239 tttttaaaacgatgaaaatttatgaagtattttgttctagttaaattcaaagaat 45098293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 331993 - 332049
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattc 103  Q
    ||||||||||||||||| | |||||||||||||||||||| || ||||| ||||||||    
T  331993 agagtgtgtttggatggag-aatgttttgagggaattcaactactttgaggtgaattc 332049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 9129505 - 9129468
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||| |||||||||||||||||||    
T  9129505 taagagtgtgtttggatgagggaatgttttgagggaat 9129468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 9137612 - 9137575
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||| |||||||||||||||||||    
T  9137612 taagagtgtgtttggatgagggaatgttttgagggaat 9137575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 115
Target Start/End: Original strand, 19475854 - 19475903
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    |||||| ||||| |||||||||| ||||| ||||||||||||||||||||    
T  19475854 aatgttatgaggtaattcaaatactttgaggtgaattccattgtttggat 19475903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 26547049 - 26547094
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaatattt 91  Q
    ||||||||||||||||| ||||| |||||| |||||||||||||||    
T  26547049 agagtgtgtttggatggaggaatattttgaaggaattcaaatattt 26547094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 39215854 - 39215922
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttg 112  Q
    |||||||||||||||||||||| ||| |||| ||||||||||| || ||||| |||||||  ||||||||    
T  39215854 ctaagagtgtgtttggatgggg-aatatttttagggaattcaattactttgaggtgaattttattgtttg 39215922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 671695 - 671656
Alignment:
Q  42 tctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||| ||||||| ||||||||||||||||||||    
T  671695 tctaagagtgtttttggataggggaatgttttgagggaat 671656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 80
Target Start/End: Complemental strand, 5415942 - 5415908
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaa 80  Q
    ||||||||||||||||||||||| |||||||||||    
T  5415942 agagtgtgtttggatgggggaatattttgagggaa 5415908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 77
Target Start/End: Original strand, 28092207 - 28092245
Alignment:
Q  39 ttctctaagagtgtgtttggatgggggaatgttttgagg 77  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  28092207 ttctcttagagtatgtttggatgggggaatgttttgagg 28092245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 112
Target Start/End: Original strand, 31070444 - 31070490
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttg 112  Q
    |||||||||||||||||||| || ||||| |||||||| ||||||||    
T  31070444 aatgttttgagggaattcaactactttgaggtgaattctattgtttg 31070490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 39110527 - 39110489
Alignment:
Q  35 agatttctctaagagtgtgtttggatgggggaatgtttt 73  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  39110527 agatttgtctaagagtgtgtttggatggggaaatgtttt 39110489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 5415782 - 5415818
Alignment:
Q  45 aagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  5415782 aagagtgtgtttggataggggaatattttgagggaat 5415818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 76
Target Start/End: Original strand, 7302344 - 7302376
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgag 76  Q
    |||||||||||||||||| ||||||||||||||    
T  7302344 taagagtgtgtttggatgagggaatgttttgag 7302376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 48824987 - 48824943
Alignment:
Q  215 aaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    |||||| ||||||||||||| |||||||||||| || ||||||||    
T  48824987 aaaattattcattgttataatttttcaaattttacattttggtcc 48824943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 157; Significance: 1e-83; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 67 - 259
Target Start/End: Original strand, 31412940 - 31413132
Alignment:
Q  67 atgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttc 166  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  31412940 atgttttgagggaattcaaatactttgatatgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtatttagttc 31413039  T
Q  167 aagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  31413040 aagttaaatttaaagaatttcaaatgacacctaaaagttaagaatttcaaaattcttcattgttataatttttcaaattttgcattttggtcc 31413132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 43 - 259
Target Start/End: Original strand, 1195348 - 1195564
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgat 142  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||| ||||||||||| ||||||||||||||| ||    
T  1195348 ctaagagtgtgtttggatgggggaatgttttgagggatttcaaatactttgaggtgaattccattgtttagataataatttgaagaattttcaaaattat 1195447  T
Q  143 ggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaa 242  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||| ||  ||||||||||||||||||||| ||||| |||||||| | |||| ||    
T  1195448 ggaaatttatgaagtattttgttcaagtcaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaatttcttaattgttatcatttttaaa 1195547  T
Q  243 attttgcaatttggtcc 259  Q
    ||||| || ||||||||    
T  1195548 attttacattttggtcc 1195564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 43 - 255
Target Start/End: Original strand, 8475176 - 8475388
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgat 142  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||   |||||||||||||||||||||||||||| ||| ||||||||||||||    
T  8475176 ctaagagtgtgtttggatggggaaatgttttgagggaattcaaatacttttgggtgaattccattgtttggataataatttgaagcattttcaaaatgat 8475275  T
Q  143 ggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaa 242  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||  ||||||| ||||||||||||| |||||||||||| | | ||||||     
T  8475276 ggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgacacctaaaagctaagaatttcaaatttcttcattgttgttatttttcat 8475375  T
Q  243 attttgcaatttg 255  Q
    |||||||| ||||    
T  8475376 attttgcattttg 8475388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 67 - 259
Target Start/End: Original strand, 9697501 - 9697693
Alignment:
Q  67 atgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttc 166  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||| | ||||||||||||||||| ||||||||||||||||||||||    
T  9697501 atgttttgaaggaattcaaatactttgatgtgaattccattgtttggataatagtttgatgaattttcaaaatgatgaaaatttatgaagtattttgttc 9697600  T
Q  167 aagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    |||||||||||| |||||||||||| ||  | ||||||||| ||||||||||||||||||| |||||| |||| |||||||||| ||||||||    
T  9697601 aagttaaatttagagaatttcaaatgacaccgaaaagttaataatttcaaaattcttcatttttataatttttaaaattttgcattttggtcc 9697693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 66 - 259
Target Start/End: Original strand, 28918203 - 28918395
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||| ||| |||||||||| ||||| ||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||| || ||||||    
T  28918203 aatgttttaaggaaattcaaatactttgaggtgaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttatgaaata-tttgtt 28918301  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||| | |||||||||||| ||  |||||||||| ||||||||||||| ||||||| ||||| |||| |||||||||| ||||||||    
T  28918302 caagttaaattcagagaatttcaaatgacacctaaaagttacgaatttcaaaatttttcattgctataattttttaaattttgcattttggtcc 28918395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 70 - 256
Target Start/End: Original strand, 1368519 - 1368704
Alignment:
Q  70 ttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaag 169  Q
    |||| ||||||||||||| |||||| |||||||| ||||||||||||||||| | ||| ||||||||||||||||||||||||||| || ||||||||||    
T  1368519 ttttaagggaattcaaatgttttgaggtgaattctattgtttggataataatatgaaggattttcaaaatgatggaaatttatgaaata-tttgttcaag 1368617  T
Q  170 ttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttgg 256  Q
    ||||||||| |||||||||||| ||   ||||||||||||||||||||||||||||||| ||||| |||| ||||||| || |||||    
T  1368618 ttaaatttagagaatttcaaatgacacttaaaagttaagaatttcaaaattcttcattgctataattttttaaattttacattttgg 1368704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 66 - 259
Target Start/End: Complemental strand, 6358286 - 6358093
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    ||||||||||| ||||| ||||| ||||  |||||||| |||||| | |||||||||| ||||||||||||||| |||||||||||| ||| |||||||     
T  6358286 aatgttttgagagaatttaaatactttgtggtgaattctattgttagaataataatttgaagaattttcaaaataatggaaatttattaagcattttgtc 6358187  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||||| ||| |||||||| ||  ||||||| ||||||||||||| |||||||||||||||| |||| |||||||||| ||||||||    
T  6358186 caagttaaatttagagagtttcaaatgacacctaaaagataagaatttcaaatttcttcattgttataatttttaaaattttgcattttggtcc 6358093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 15616389 - 15616270
Alignment:
Q  73 tgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagtta 172  Q
    |||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  15616389 tgagggaatttaaatattttgaggtgaattctattgtttggataataatttaaagaatttttaaaatgatgcaaatttatgaagtattttgttcaagtta 15616290  T
Q  173 aatttaaagaatttcaaatt 192  Q
    |||||| ||||||| |||||    
T  15616289 aatttagagaattttaaatt 15616270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 70 - 258
Target Start/End: Complemental strand, 26901795 - 26901607
Alignment:
Q  70 ttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaag 169  Q
    ||||||||||||||||||| ||| | ||||||| ||||||| |||  |||||||  |||||||| |||||||| ||||||||||||||||||||||||||    
T  26901795 ttttgagggaattcaaataattttaggtgaatttcattgttcggaggataattttgagaatttttaaaatgatagaaatttatgaagtattttgttcaag 26901696  T
Q  170 ttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtc 258  Q
    |||||||||  ||||||||||| || |||||||   |||||||| ||| ||||||||| |||||  ||||||||| || || |||||||    
T  26901695 ttaaatttattgaatttcaaatgacatctaaaaacaaagaattttaaatttcttcatttttatagtttttcaaatattacattttggtc 26901607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 107 - 259
Target Start/End: Original strand, 10105118 - 10105269
Alignment:
Q  107 tgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagtta 206  Q
    ||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||| ||||||||||||||| |||||||| ||| ||  ||||||  ||    
T  10105118 tgtttggataataatttgaagcatttttaaaatgatggaaatgtatgaagtattttattcaagttaaatttagagaatttc-aatgacacctaaaaacta 10105216  T
Q  207 agaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
     |||||||||| ||||||||||| |||  |||||||||||| || ||||||||    
T  10105217 ggaatttcaaatttcttcattgtaatattttttcaaatttttcattttggtcc 10105269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 73 - 247
Target Start/End: Complemental strand, 29395547 - 29395373
Alignment:
Q  73 tgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagtta 172  Q
    ||||||| |||||||  ||| | || |||| ||||| |||||| |||||||  |||||||||||||||||||| ||||| ||||||||||||| || |||    
T  29395547 tgagggagttcaaatgcttttaagtcaatttcattggttggatgataatttggagaattttcaaaatgatggagatttacgaagtattttgttgaaatta 29395448  T
Q  173 aatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaatttt 247  Q
    ||||||||||||||||||| || |||  | |||||| |||| ||| |||||| || |||| | ||||||||||||    
T  29395447 aatttaaagaatttcaaatgacatctcgacgttaaggatttgaaatttcttcgttcttatcatttttcaaatttt 29395373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 226
Target Start/End: Complemental strand, 29902024 - 29901951
Alignment:
Q  153 gaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcat 226  Q
    |||||||||||||||| ||||||||||||||||||| || ||   |||||||||||||||||||||||||||||    
T  29902024 gaagtattttgttcaatttaaatttaaagaatttcatatgacacataaaagttaagaatttcaaaattcttcat 29901951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 190
Target Start/End: Original strand, 15832760 - 15832820
Alignment:
Q  131 tttcaaaatgatggaaattt-atgaagtattttgttcaagttaaatttaaagaatttcaaa 190  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  15832760 tttcaaaatgatggaaattttatgaagtattttgttcaagttcaatttaaagaatttcaaa 15832820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 29889469 - 29889420
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  29889469 aatgttttgagggaattcaaatactttgatgtgaattccattatttggat 29889420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 34245015 - 34244966
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  34245015 aatgttttgagggaattcaaatactttgatgtaaattccattgtttggat 34244966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 138
Target Start/End: Original strand, 15832504 - 15832576
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaa 138  Q
    |||||||| |||||||||||||| ||||  ||||||| ||||||||||||| |||||| ||| ||||||||||    
T  15832504 aatgttttaagggaattcaaatactttggggtgaatttcattgtttggatactaatttgaagtattttcaaaa 15832576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 115
Target Start/End: Original strand, 34364752 - 34364830
Alignment:
Q  42 tctaagagtgtgtttggatgggggaatgt-----tttgagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    |||||||||||||||||||| ||||||||     | |||||||||| ||||| ||||| ||||||||||||||||||||    
T  34364752 tctaagagtgtgtttggatgagggaatgtaatgttatgagggaatttaaatactttgaggtgaattccattgtttggat 34364830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 6919869 - 6919832
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaa 80  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6919869 ctaagagtgtgtttggatgggggaatgttttgagggaa 6919832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 9285791 - 9285731
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattc 103  Q
    |||||||||||||| |||| ||||||||||||||||||||||| || |||||  |||||||    
T  9285791 ctaagagtgtgtttagatgagggaatgttttgagggaattcaactactttgagatgaattc 9285731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 81
Target Start/End: Original strand, 9285647 - 9285682
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||||    
T  9285647 agagtgtgtttggatgggggaatgttttgagggaat 9285682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 81
Target Start/End: Original strand, 33733432 - 33733467
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||||    
T  33733432 agagtgtgtttggatgggggaatgttttgagggaat 33733467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 28918162 - 28918200
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  28918162 ctaagagtgtgtttggatggaggaatgttttgagggaat 28918200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 167
Target Start/End: Complemental strand, 413691 - 413608
Alignment:
Q  84 aaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    ||||| ||||| ||||||| |||| |||  |||||||||| || |||||| ||||| ||| |||||||| || |||||||||||    
T  413691 aaatactttgaggtgaatttcattttttttataataatttgaataatttttaaaataatgaaaatttataaaatattttgttca 413608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 81
Target Start/End: Original strand, 13487275 - 13487310
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||| ||||||||||||||||||||||||    
T  13487275 agagtgtgtttagatgggggaatgttttgagggaat 13487310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 115
Target Start/End: Original strand, 13487315 - 13487362
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    |||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  13487315 tgttatgagggaattcaaatactttgaggtgaatttcattgtttggat 13487362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 34245053 - 34245018
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||| ||||||||||||||||||    
T  34245053 agagtgtgtttggatggaggaatgttttgagggaat 34245018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 8574827 - 8574789
Alignment:
Q  43 ctaagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  8574827 ctaagagtgtgtttggatggggaaatgttttgagtgaat 8574789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 112
Target Start/End: Original strand, 9763050 - 9763096
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttg 112  Q
    |||||||||||||||||||| || ||||| |||||||| ||||||||    
T  9763050 aatgttttgagggaattcaactactttgaggtgaattctattgtttg 9763096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 259
Target Start/End: Complemental strand, 15616282 - 15616230
Alignment:
Q  207 agaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||| ||| || ||||||||||||| |||||||||||| || ||||||||    
T  15616282 agaattttaaattttttcattgttataatttttcaaattttacattttggtcc 15616230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 46 - 255
Target Start/End: Original strand, 109049 - 109257
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatgga 145  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||    
T  109049 agagtgtgtttggatgggggaatgttttgagggaatttaaatactttgatgtgaattccattgtttggataagaatttgaagaattttcaaaatgat-ga 109147  T
Q  146 aatttatgaagtattttgttcaagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaatt 245  Q
    ||||||| ||||||||| ||||||||||||||| | |||||||||| ||  ||||||||||||||||| ||||||||||||||||||||  |||||||||    
T  109148 aatttataaagtattttattcaagttaaatttagataatttcaaatgacacctaaaagttaagaattttaaaattcttcattgttataatctttcaaatt 109247  T
Q  246 ttgcaatttg 255  Q
    ||||| ||||    
T  109248 ttgcactttg 109257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 66 - 259
Target Start/End: Complemental strand, 4533 - 4340
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||||| |||||||||||||||  |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  4533 aatgttttgaggaaattcaaatattttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgtt 4434  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||||| |||||||||||| ||  ||||||||||||||||||||| |||||||||||| | | |||||| |||||||| ||| ||||    
T  4433 caagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaatttcttcattgttgttatttttcatattttgcattttagtcc 4340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 81
Target Start/End: Complemental strand, 4570 - 4536
Alignment:
Q  47 gagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||| |||||||||||||||||||    
T  4570 gagtgtgtttggatgagggaatgttttgagggaat 4536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 66 - 259
Target Start/End: Complemental strand, 5177 - 4984
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||||| |||||||||||||||  |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  5177 aatgttttgaggaaattcaaatattttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgtt 5078  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||||| |||||||||||| ||  ||||||||||||||||||||| |||||||||||| | | |||||| |||||||| ||| ||||    
T  5077 caagttaaatttagagaatttcaaatgacacctaaaagttaagaatttcaaatttcttcattgttgttatttttcatattttgcattttagtcc 4984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 81
Target Start/End: Complemental strand, 5214 - 5180
Alignment:
Q  47 gagtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||| |||||||||||||||||||    
T  5214 gagtgtgtttggatgagggaatgttttgagggaat 5180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 126; Significance: 5e-65; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 66 - 259
Target Start/End: Original strand, 2905 - 3097
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  2905 aatgttttgagggaattcaaatattt-gaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaaatattttgtt 3003  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||| ||||||| ||||||| |||| ||  || |||| ||||||||||||| |||||||||||||||| |||||||||||| || ||||||||    
T  3004 caagtcaaatttagagaatttgaaatgacaccttaaagctaagaatttcaaatttcttcattgttataatttttcaaattttacattttggtcc 3097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 126; Significance: 5e-65; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 66 - 247
Target Start/End: Original strand, 4113 - 4293
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4113 aatgttttgagggaattcaaatactttgaggtgaattctattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgtt 4212  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaatttt 247  Q
     |||||||| ||| |||||||||||| ||  |||||| |||||||||||||||||||||||| |||||| ||||||||||||    
T  4213 -aagttaaaattagagaatttcaaatgacacctaaaacttaagaatttcaaaattcttcattattataatttttcaaatttt 4293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 73 - 249
Target Start/End: Complemental strand, 50335 - 50159
Alignment:
Q  73 tgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagtta 172  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||    
T  50335 tgagggaattcaaatactttgatgtgaattccattgtttgaataataatttgaagagttttcaaaatgatggaaatttatgaagtactttgttcaagtta 50236  T
Q  173 aatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgc 249  Q
    ||||||||||||||||||| ||  ||||||||||||||||||||| |  ||||||||||||| |||| || ||||||    
T  50235 aatttaaagaatttcaaatgacacctaaaagttaagaatttcaaattctttcattgttataattttttaatttttgc 50159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 66 - 257
Target Start/End: Complemental strand, 19820 - 19629
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||| ||  |||||||||| ||||| ||||||| |||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19820 aatgttttaagaaaattcaaatactttgaggtgaattacattatttagataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgtt 19721  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggt 257  Q
    ||||||||||||| | |||||||||| ||  ||||||||||||||||||| |||||||||||||||||| ||| ||||||||||| ||||||    
T  19720 caagttaaatttagataatttcaaatgacacctaaaagttaagaatttcataattcttcattgttataattttccaaattttgcattttggt 19629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 66 - 155
Target Start/End: Original strand, 19236 - 19324
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaa 155  Q
    |||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||    
T  19236 aatgttttgagg-aattcaaatattttgaggtgaattccattgtttcgataataatttgaagaattttaaaaatgatggaaatttatgaa 19324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 110; Significance: 2e-55; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 66 - 259
Target Start/End: Complemental strand, 221231 - 221038
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 165  Q
    |||||||| |||||||||||||||||||  ||||||| |||| ||||||||||||||| | | |||||||||||||||||||||||||||||||||||||    
T  221231 aatgttttaagggaattcaaatattttggggtgaatttcattatttggataataatttgatgtattttcaaaatgatggaaatttatgaagtattttgtt 221132  T
Q  166 caagttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||||| |||||||||||| ||   |||||| ||||||||| ||| |||||||||||| | | |||||| |||||||| ||||||||    
T  221131 caagttaaatttagagaatttcaaatgacacttaaaagctaagaattttaaatttcttcattgttgttatttttcatattttgcattttggtcc 221038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 96 - 259
Target Start/End: Complemental strand, 223754 - 223591
Alignment:
Q  96 gtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattact 195  Q
    ||||||| |||| ||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||     
T  223754 gtgaatttcattatttggataataatttgatgtattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttagagaatttcaaatgaca 223655  T
Q  196 tctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
      |||||| ||||||||| ||| |||||||||||| | | |||||| |||||||| ||||||||    
T  223654 cttaaaagctaagaattttaaatttcttcattgttgttatttttcatattttgcattttggtcc 223591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 68 - 259
Target Start/End: Original strand, 7191 - 7382
Alignment:
Q  68 tgttttgagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttca 167  Q
    |||||| |||||||||||||| ||||  |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||| ||||    
T  7191 tgttttaagggaattcaaatactttggagtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttacgaagtattttattca 7290  T
Q  168 agttaaatttaaagaatttcaaattacttctaaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||| |||||||||||| ||  |||||||  |||||||||| | |||||||||||| | | |||||| |||||||| ||||||||    
T  7291 agttaaatttagagaatttcaaatgacacctaaaagccaagaatttcatatttcttcattgttgttatttttcatattttgcattttggtcc 7382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 96; Significance: 4e-47; HSPs: 3)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 42 - 190
Target Start/End: Complemental strand, 16435 - 16285
Alignment:
Q  42 tctaagagtgtgtttggatgggggaatgttttg--agggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaat 139  Q
    ||||||||||||||| ||||||||||||||||   ||| |||||||||||||||| || |||||||||||||||||||| |||| ||||||||| |||||    
T  16435 tctaagagtgtgtttagatgggggaatgttttttaaggaaattcaaatattttgaggtaaattccattgtttggataatcatttgaagaatttttaaaat 16336  T
Q  140 gatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaa 190  Q
    ||||||||||||| |||||||||||||||||||||| || |||||||||||    
T  16335 gatggaaatttataaagtattttgttcaagttaaatgtagagaatttcaaa 16285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 96 - 247
Target Start/End: Complemental strand, 15871 - 15720
Alignment:
Q  96 gtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattact 195  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||| ||||||| ||     
T  15871 gtgaattccattgtttggataataatttgaagaattttcaaaatgatgggaatttatgaagtatattgttcaagttaaatttagagaacttcaaatgaca 15772  T
Q  196 tctaaaagttaagaatttcaaaattcttcattgttataaattttcaaatttt 247  Q
     | || || ||||||||||||||||||||||||| ||||  ||| |||||||    
T  15771 ccaaataggtaagaatttcaaaattcttcattgtcataatcttttaaatttt 15720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 259
Target Start/End: Complemental strand, 16295 - 16243
Alignment:
Q  207 agaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||||||||||||||| |||  |||||||||||| || ||||||||    
T  16295 agaatttcaaaattcttcattgtcatattttttcaaattttacattttggtcc 16243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 96; Significance: 4e-47; HSPs: 3)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 44 - 190
Target Start/End: Complemental strand, 9644 - 9497
Alignment:
Q  44 taagagtgtgtttggatgggggaatgtttt-gagggaattcaaatattttgatgtgaattccattgtttggataataatttaaagaattttcaaaatgat 142  Q
    ||||||||||||| ||||| |||||||||| ||| ||||||||||| ||||| || |||||||||||||||||||| |||| ||||||||||||||||||    
T  9644 taagagtgtgtttagatggaggaatgtttttgagagaattcaaatactttgaggtaaattccattgtttggataatcatttgaagaattttcaaaatgat 9545  T
Q  143 ggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaa 190  Q
    |||||||||| |||||||||||||||||||||| || |||||||||||    
T  9544 ggaaatttataaagtattttgttcaagttaaatgtagagaatttcaaa 9497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 96 - 247
Target Start/End: Complemental strand, 2913 - 2762
Alignment:
Q  96 gtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagttaaatttaaagaatttcaaattact 195  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||| | || ||||||| ||     
T  2913 gtgaattccattgtttggataataatttgaagaattttcaaaatgatgggaatttatgaagtatattgttcaagttaaatttagataacttcaaatgaca 2814  T
Q  196 tctaaaagttaagaatttcaaaattcttcattgttataaattttcaaatttt 247  Q
     | || || ||||||||||||||||||||||||| ||||  ||| |||||||    
T  2813 ccaaataggtaagaatttcaaaattcttcattgtcataatcttttaaatttt 2762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 259
Target Start/End: Complemental strand, 9507 - 9455
Alignment:
Q  207 agaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtcc 259  Q
    ||||||||||||||||||||||| |||  |||||||||||| || ||||||||    
T  9507 agaatttcaaaattcttcattgtcatattttttcaaattttacattttggtcc 9455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 99 - 258
Target Start/End: Complemental strand, 11958 - 11798
Alignment:
Q  99 aattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaa-gttaaatttaaagaatttcaaattacttc 197  Q
    ||||||||||||||   |||||||| | ||| ||| ||||||||| |||||||||||||||||||||||| | |||||||| ||||||||||||  |  |    
T  11958 aattccattgtttgttaaataatttgatgaaattttaaaatgatgaaaatttatgaagtattttgttcaaagataaatttagagaatttcaaatggcacc 11859  T
Q  198 taaaagttaagaatttcaaaattcttcattgttataaattttcaaattttgcaatttggtc 258  Q
    |||||| ||||||||||||| ||||||||| ||||||  |||||||||||||| |||||||    
T  11858 taaaagctaagaatttcaaatttcttcattattataacatttcaaattttgcattttggtc 11798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 115
Target Start/End: Original strand, 10924 - 10973
Alignment:
Q  66 aatgttttgagggaattcaaatattttgatgtgaattccattgtttggat 115  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  10924 aatgttttgagggaattcaaatactttgacgtgaattccattgtttggat 10973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 17640 - 17601
Alignment:
Q  46 agagtgtgtttggatgggggaatgttttgagggaattcaa 85  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17640 agagtgtgtttggatgggggaatgttttgagggaattcaa 17601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 401 - 439
Alignment:
Q  42 tctaagagtgtgtttggatgggggaatgttttgagggaa 80  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  401 tctaagagtgtgtttggatgggggaatattttgagggaa 439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 562 - 529
Alignment:
Q  48 agtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||    
T  562 agtgtgtttggatgggggaatgttttgagggaat 529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 80
Target Start/End: Complemental strand, 2192 - 2154
Alignment:
Q  42 tctaagagtgtgtttggatgggggaatgttttgagggaa 80  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  2192 tctaagagtgtgtttggatgggggaatattttgagggaa 2154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 2031 - 2064
Alignment:
Q  48 agtgtgtttggatgggggaatgttttgagggaat 81  Q
    ||||||||||||||||||||||||||||||||||    
T  2031 agtgtgtttggatgggggaatgttttgagggaat 2064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 42139 - 42102
Alignment:
Q  44 taagagtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||||||||||| |||||||||||||    
T  42139 taagagtgtgtttggatgggggaacgttttgagggaat 42102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 82945 - 82978
Alignment:
Q  48 agtgtgtttggatgggggaatgttttgagggaat 81  Q
    |||||||||||||||| |||||||||||||||||    
T  82945 agtgtgtttggatgggtgaatgttttgagggaat 82978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 99
Target Start/End: Original strand, 56280 - 56345
Alignment:
Q  39 ttctctaagagtgtgtttggatggggg-----aatgttttgagggaattcaaatattttgatgtga 99  Q
    |||| ||||||||||||||||||||||     |||||||||||||||||||| || ||||| ||||    
T  56280 ttctttaagagtgtgtttggatgggggaatgtaatgttttgagggaattcaactactttgaggtga 56345  T

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