View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8516_high_6 (Length: 406)

Name: NF8516_high_6
Description: NF8516
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8516_high_6
NF8516_high_6
[»] chr4 (14 HSPs)
chr4 (278-393)||(12735233-12735348)
chr4 (17-104)||(12735572-12735659)
chr4 (317-393)||(12763949-12764025)
chr4 (157-225)||(12735401-12735469)
chr4 (154-199)||(238545-238590)
chr4 (138-195)||(45874055-45874112)
chr4 (154-196)||(1173950-1173992)
chr4 (154-196)||(11277981-11278023)
chr4 (154-196)||(18257328-18257370)
chr4 (154-196)||(53457823-53457865)
chr4 (154-195)||(19849590-19849631)
chr4 (154-195)||(26424944-26424985)
chr4 (154-195)||(34739280-34739321)
chr4 (154-195)||(54768519-54768560)
[»] chr2 (13 HSPs)
chr2 (138-196)||(34460368-34460426)
chr2 (138-195)||(26605624-26605681)
chr2 (139-199)||(19537303-19537363)
chr2 (138-197)||(11708676-11708735)
chr2 (154-196)||(10639693-10639735)
chr2 (154-196)||(11459714-11459756)
chr2 (138-196)||(19816219-19816277)
chr2 (138-196)||(45125236-45125294)
chr2 (154-195)||(33083641-33083682)
chr2 (154-195)||(34234530-34234571)
chr2 (154-195)||(42578180-42578221)
chr2 (157-197)||(8742688-8742728)
chr2 (154-182)||(38440284-38440312)
[»] chr1 (15 HSPs)
chr1 (139-196)||(4065960-4066017)
chr1 (154-196)||(45813098-45813140)
chr1 (138-195)||(11688263-11688320)
chr1 (154-195)||(25931236-25931277)
chr1 (138-195)||(28455874-28455931)
chr1 (154-194)||(5943682-5943722)
chr1 (138-185)||(39276360-39276407)
chr1 (138-196)||(41761482-41761540)
chr1 (154-196)||(48660021-48660063)
chr1 (154-195)||(29994470-29994511)
chr1 (154-195)||(32007074-32007115)
chr1 (154-195)||(41808202-41808243)
chr1 (154-183)||(47111469-47111498)
chr1 (139-195)||(192415-192471)
chr1 (139-179)||(17646239-17646279)
[»] chr8 (12 HSPs)
chr8 (138-197)||(32333112-32333171)
chr8 (138-196)||(28817255-28817313)
chr8 (139-195)||(10963312-10963368)
chr8 (149-195)||(41753062-41753108)
chr8 (154-196)||(42192726-42192768)
chr8 (154-195)||(70610-70651)
chr8 (154-195)||(6602605-6602646)
chr8 (154-195)||(6678058-6678099)
chr8 (154-195)||(7792661-7792702)
chr8 (154-195)||(12534805-12534846)
chr8 (138-195)||(35779568-35779625)
chr8 (157-185)||(29513885-29513913)
[»] chr3 (11 HSPs)
chr3 (138-184)||(28844515-28844561)
chr3 (154-195)||(1778851-1778892)
chr3 (154-196)||(7824541-7824583)
chr3 (154-196)||(29689569-29689611)
chr3 (138-196)||(33334607-33334665)
chr3 (154-195)||(4601425-4601466)
chr3 (154-195)||(42392892-42392933)
chr3 (138-195)||(43247721-43247778)
chr3 (154-195)||(51666012-51666053)
chr3 (154-195)||(54151768-54151809)
chr3 (154-195)||(54158266-54158307)
[»] chr5 (5 HSPs)
chr5 (139-180)||(35545948-35545989)
chr5 (138-194)||(4825010-4825066)
chr5 (154-198)||(35317784-35317828)
chr5 (138-196)||(40177623-40177681)
chr5 (154-195)||(13203957-13203998)
[»] chr7 (7 HSPs)
chr7 (138-196)||(2146635-2146693)
chr7 (154-184)||(5587291-5587321)
chr7 (154-184)||(5592252-5592282)
chr7 (154-196)||(31770619-31770661)
chr7 (138-196)||(44083939-44083997)
chr7 (157-198)||(40642971-40643012)
chr7 (154-194)||(47250338-47250378)
[»] chr6 (5 HSPs)
chr6 (154-196)||(33621493-33621535)
chr6 (141-182)||(14495642-14495683)
chr6 (154-195)||(21000692-21000733)
chr6 (154-195)||(33704216-33704257)
chr6 (138-195)||(35218699-35218756)
[»] scaffold1348 (1 HSPs)
scaffold1348 (154-195)||(949-990)
[»] scaffold0044 (1 HSPs)
scaffold0044 (154-195)||(10060-10101)
[»] scaffold0032 (1 HSPs)
scaffold0032 (154-195)||(56481-56522)
[»] scaffold0119 (2 HSPs)
scaffold0119 (139-195)||(14023-14079)
scaffold0119 (139-195)||(19703-19759)
[»] scaffold0067 (1 HSPs)
scaffold0067 (137-185)||(34828-34876)


Alignment Details
Target: chr4 (Bit Score: 112; Significance: 2e-56; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 278 - 393
Target Start/End: Complemental strand, 12735348 - 12735233
Alignment:
Q  278 gcaccaattaattgttagcttataagtcataacatctctaattttggcagtggatgatgaacgattcatcaaaccagagtcctttcatttccaatgcaga 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12735348 gcaccaattaattgttagcttataagtcataacatctctaattttggcagtggatgatgaacgatgcatcaaaccagagtcctttcatttccaatgcaga 12735249  T
Q  378 caaccttatatgctct 393  Q
    ||||||||||||||||    
T  12735248 caaccttatatgctct 12735233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 12735659 - 12735572
Alignment:
Q  17 cactatgtttacaccaaaatatatattaagaatattatgtttacaccaaaagatatattttgacttgcactaaagttcatgtaaactc 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12735659 cactatgtttacaccaaaatatatattaagaatattatgtttacaccaaaagatatattttgacttgcactaaagttcatgtaaactc 12735572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 317 - 393
Target Start/End: Complemental strand, 12764025 - 12763949
Alignment:
Q  317 aattttggcagtggatgatgaacgattcatcaaaccagagtcctttcatttccaatgcagacaaccttatatgctct 393  Q
    |||||||||||||| ||||||||  |||||||||||| | |||||||||| |||||||||||||||| |||||||||    
T  12764025 aattttggcagtgggtgatgaacatttcatcaaaccaaaatcctttcattcccaatgcagacaacctcatatgctct 12763949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 12735469 - 12735401
Alignment:
Q  157 caatttcggcatttgtcagttgagctaggctttctagacagttcatgcaaactcttattgaacaaaaac 225  Q
    |||||| |||||||||||||||||||||   |||||||||||||||| ||||||||||||||| |||||    
T  12735469 caattttggcatttgtcagttgagctagtacttctagacagttcatgtaaactcttattgaacgaaaac 12735401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 238545 - 238590
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagacagtt 199  Q
    |||||||||||||||||| |||||||||||||  ||||||||||||    
T  238545 ttgcaatttcggcatttgacagttgagctaggacttctagacagtt 238590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 45874112 - 45874055
Alignment:
Q  138 gtcacaacgttcggtattgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||| |||  ||||||||| ||||||||||||||||||||||  ||||||||    
T  45874112 gtcacaacgtccggccttgcaattttggcatttgtcagttgagctaggacttctagac 45874055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 1173992 - 1173950
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagaca 196  Q
    |||||||||||||||||| |||||||||||||  |||||||||    
T  1173992 ttgcaatttcggcatttgccagttgagctaggacttctagaca 1173950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 11278023 - 11277981
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagaca 196  Q
    |||||||||||||||||| |||||||||||||  |||||||||    
T  11278023 ttgcaatttcggcatttgccagttgagctaggacttctagaca 11277981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 18257370 - 18257328
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagaca 196  Q
    |||||||||||||||||| |||||||||||||  |||||||||    
T  18257370 ttgcaatttcggcatttgccagttgagctaggacttctagaca 18257328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 53457865 - 53457823
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagaca 196  Q
    |||||||||||||||||| |||||||||||||  |||||||||    
T  53457865 ttgcaatttcggcatttgccagttgagctaggacttctagaca 53457823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 19849590 - 19849631
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||||||||||| |||||||||||||  ||||||||    
T  19849590 ttgcaatttcggcatttgccagttgagctaggacttctagac 19849631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 26424944 - 26424985
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||||||||||| |||||||||||||  ||||||||    
T  26424944 ttgcaatttcggcatttgccagttgagctaggacttctagac 26424985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 34739321 - 34739280
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||||||||||| |||||||||||||  ||||||||    
T  34739321 ttgcaatttcggcatttgccagttgagctaggacttctagac 34739280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 54768519 - 54768560
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||||||||||| |||||||||||||  ||||||||    
T  54768519 ttgcaatttcggcatttgccagttgagctaggacttctagac 54768560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 34460426 - 34460368
Alignment:
Q  138 gtcacaacgttcggtattgcaatttcggcatttgtcagttgagctaggctttctagaca 196  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||||  |||||||||    
T  34460426 gtcacaacgtccggccttgcaatttcggcatttgtcagttgagctaggacttctagaca 34460368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 26605681 - 26605624
Alignment:
Q  138 gtcacaacgttcggtattgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||| |||  |||||||||||||||||| |||||||||||||  ||||||||    
T  26605681 gtcacaacgtccggccttgcaatttcggcatttgccagttgagctaggacttctagac 26605624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 19537363 - 19537303
Alignment:
Q  139 tcacaacgttcggtattgcaatttcggcatttgtcagttgagctaggctttctagacagtt 199  Q
    ||||||||| |||  |||||||||||||||||| ||||||| |||||  ||||||||||||    
T  19537363 tcacaacgtccggccttgcaatttcggcatttgccagttgaactaggacttctagacagtt 19537303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 138 - 197
Target Start/End: Complemental strand, 11708735 - 11708676
Alignment:
Q  138 gtcacaacgttcggtattgcaatttcggcatttgtcagttgagctaggctttctagacag 197  Q
    |||||||||| |||  || ||||||||||||||| |||||||||||||  ||||||||||    
T  11708735 gtcacaacgtccggccttacaatttcggcatttgccagttgagctaggacttctagacag 11708676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 196
Target Start/End: Original strand, 10639693 - 10639735
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagaca 196  Q
    |||||||||||||||||| |||||||||||||  |||||||||    
T  10639693 ttgcaatttcggcatttgccagttgagctaggacttctagaca 10639735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 11459756 - 11459714
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagaca 196  Q
    |||||||||||||||||| |||||||||||||  |||||||||    
T  11459756 ttgcaatttcggcatttgccagttgagctaggacttctagaca 11459714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 19816277 - 19816219
Alignment:
Q  138 gtcacaacgttcggtattgcaatttcggcatttgtcagttgagctaggctttctagaca 196  Q
    |||||||||| |||  |||||||||||| ||||| |||||||||||||  |||||||||    
T  19816277 gtcacaacgtccggccttgcaatttcggtatttgccagttgagctaggacttctagaca 19816219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 45125236 - 45125294
Alignment:
Q  138 gtcacaacgttcggtattgcaatttcggcatttgtcagttgagctaggctttctagaca 196  Q
    |||||||||| |||  || ||||||||||||||| |||||||||||||  |||||||||    
T  45125236 gtcacaacgtccggccttacaatttcggcatttgccagttgagctaggacttctagaca 45125294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 33083641 - 33083682
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||||||||||| |||||||||||||  ||||||||    
T  33083641 ttgcaatttcggcatttgccagttgagctaggacttctagac 33083682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 34234571 - 34234530
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||||||||||| |||||||||||||  ||||||||    
T  34234571 ttgcaatttcggcatttgccagttgagctaggacttctagac 34234530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 42578221 - 42578180
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||||||||||| |||||||||||||  ||||||||    
T  42578221 ttgcaatttcggcatttgccagttgagctaggacttctagac 42578180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 8742688 - 8742728
Alignment:
Q  157 caatttcggcatttgtcagttgagctaggctttctagacag 197  Q
    |||||||||| ||||||||||||||||||  ||||||||||    
T  8742688 caatttcggcctttgtcagttgagctaggacttctagacag 8742728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 182
Target Start/End: Original strand, 38440284 - 38440312
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagct 182  Q
    |||||||||||||||||||||||||||||    
T  38440284 ttgcaatttcggcatttgtcagttgagct 38440312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 4066017 - 4065960
Alignment:
Q  139 tcacaacgttcggtattgcaatttcggcatttgtcagttgagctaggctttctagaca 196  Q
    ||||||||||| || |||||||||||| |||||||||||||||||||  |||||||||    
T  4066017 tcacaacgttcagtcttgcaatttcggtatttgtcagttgagctaggtcttctagaca 4065960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 196
Target Start/End: Original strand, 45813098 - 45813140
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagaca 196  Q
    ||||||||||||||||||||||||||||||||  |||||||||    
T  45813098 ttgcaatttcggcatttgtcagttgagctaggacttctagaca 45813140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 11688320 - 11688263
Alignment:
Q  138 gtcacaacgttcggtattgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    ||||||||||||||  |||||||||||  |||||||||||||||||||  ||||||||    
T  11688320 gtcacaacgttcgggcttgcaatttcgatatttgtcagttgagctaggacttctagac 11688263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 25931236 - 25931277
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  25931236 ttgcaatttcggcatttgtcagttgagttaggatttctagac 25931277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 28455931 - 28455874
Alignment:
Q  138 gtcacaacgttcggtattgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||| |||  |||||||||||||||||| |||||||||||||  ||||||||    
T  28455931 gtcacaacgtccggccttgcaatttcggcatttgccagttgagctaggacttctagac 28455874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 5943722 - 5943682
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctaga 194  Q
    ||||||||||||||||||||||||||||||||  |||||||    
T  5943722 ttgcaatttcggcatttgtcagttgagctaggaattctaga 5943682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 39276407 - 39276360
Alignment:
Q  138 gtcacaacgttcggtattgcaatttcggcatttgtcagttgagctagg 185  Q
    |||||||||| |||  |||||||||||||||||| |||||||||||||    
T  39276407 gtcacaacgtccggccttgcaatttcggcatttgccagttgagctagg 39276360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 41761482 - 41761540
Alignment:
Q  138 gtcacaacgttcggtattgcaatttcggcatttgtcagttgagctaggctttctagaca 196  Q
    |||||||||| |||  |||||||||||||||||| ||||||| |||||  |||||||||    
T  41761482 gtcacaacgtccggccttgcaatttcggcatttgccagttgaactaggacttctagaca 41761540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 48660063 - 48660021
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagaca 196  Q
    |||||||||||||||||| |||||||||||||  |||||||||    
T  48660063 ttgcaatttcggcatttgccagttgagctaggacttctagaca 48660021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 29994470 - 29994511
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||||||||||| |||||||||||||  ||||||||    
T  29994470 ttgcaatttcggcatttgccagttgagctaggacttctagac 29994511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 32007115 - 32007074
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||||||||||| |||||||||||||  ||||||||    
T  32007115 ttgcaatttcggcatttgccagttgagctaggacttctagac 32007074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 41808243 - 41808202
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||||||||||| |||||||||||||  ||||||||    
T  41808243 ttgcaatttcggcatttgccagttgagctaggacttctagac 41808202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 183
Target Start/End: Complemental strand, 47111498 - 47111469
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagcta 183  Q
    ||||||||||||||||||||||||||||||    
T  47111498 ttgcaatttcggcatttgtcagttgagcta 47111469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 192471 - 192415
Alignment:
Q  139 tcacaacgttcggtattgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    ||||||||| |||  |||||||||  |||||||||||||||||||||  ||||||||    
T  192471 tcacaacgtccggccttgcaattttagcatttgtcagttgagctaggacttctagac 192415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 17646239 - 17646279
Alignment:
Q  139 tcacaacgttcggtattgcaatttcggcatttgtcagttga 179  Q
    ||||||| ||| || ||||||||||||||||||||||||||    
T  17646239 tcacaaccttcagtcttgcaatttcggcatttgtcagttga 17646279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000004; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 138 - 197
Target Start/End: Complemental strand, 32333171 - 32333112
Alignment:
Q  138 gtcacaacgttcggtattgcaatttcggcatttgtcagttgagctaggctttctagacag 197  Q
    |||||||||| |||  |||||||||||||||||| |||||||||||||  ||||||||||    
T  32333171 gtcacaacgtccggccttgcaatttcggcatttgccagttgagctaggacttctagacag 32333112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 28817313 - 28817255
Alignment:
Q  138 gtcacaacgttcggtattgcaatttcggcatttgtcagttgagctaggctttctagaca 196  Q
    |||||||||| |||  |||||||||||||||||| |||||||||||||  |||||||||    
T  28817313 gtcacaacgtccggccttgcaatttcggcatttgccagttgagctaggacttctagaca 28817255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 10963312 - 10963368
Alignment:
Q  139 tcacaacgttcggtattgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||||||  ||| |||||||||||||| |||||||||||||  ||||||||    
T  10963312 tcacaacgttcggccttgtaatttcggcatttgccagttgagctaggacttctagac 10963368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 195
Target Start/End: Original strand, 41753062 - 41753108
Alignment:
Q  149 cggtattgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||| ||||||||||| ||||||||||||||||||||  ||||||||    
T  41753062 cggtcttgcaatttcgacatttgtcagttgagctaggacttctagac 41753108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 196
Target Start/End: Original strand, 42192726 - 42192768
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagaca 196  Q
    |||||||||||||||||| |||||||||||||  |||||||||    
T  42192726 ttgcaatttcggcatttgccagttgagctaggacttctagaca 42192768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 70610 - 70651
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||||||||||| |||||||||||||  ||||||||    
T  70610 ttgcaatttcggcatttgccagttgagctaggacttctagac 70651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 6602605 - 6602646
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||||||||||| |||||||||||||  ||||||||    
T  6602605 ttgcaatttcggcatttgccagttgagctaggacttctagac 6602646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 6678058 - 6678099
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||||||||||| |||||||||||||  ||||||||    
T  6678058 ttgcaatttcggcatttgccagttgagctaggacttctagac 6678099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 7792702 - 7792661
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||||||||||| |||||||||||||  ||||||||    
T  7792702 ttgcaatttcggcatttgccagttgagctaggacttctagac 7792661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 12534805 - 12534846
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||||||||||| |||||||||||||  ||||||||    
T  12534805 ttgcaatttcggcatttgccagttgagctaggacttctagac 12534846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 35779568 - 35779625
Alignment:
Q  138 gtcacaacgttcggtattgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||| |||  ||||||||| |||||||| |||||||||||||  ||||||||    
T  35779568 gtcacaacgtccggccttgcaattttggcatttgccagttgagctaggacttctagac 35779625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 185
Target Start/End: Complemental strand, 29513913 - 29513885
Alignment:
Q  157 caatttcggcatttgtcagttgagctagg 185  Q
    |||||||||||||||||||||||||||||    
T  29513913 caatttcggcatttgtcagttgagctagg 29513885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 28844561 - 28844515
Alignment:
Q  138 gtcacaacgttcggtattgcaatttcggcatttgtcagttgagctag 184  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||    
T  28844561 gtcacaacgtccggccttgcaatttcggcatttgtcagttgagctag 28844515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 1778892 - 1778851
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    ||||||||||||||||||||||||||||||||  ||||||||    
T  1778892 ttgcaatttcggcatttgtcagttgagctaggacttctagac 1778851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 196
Target Start/End: Original strand, 7824541 - 7824583
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagaca 196  Q
    |||||||||||||||||| |||||||||||||  |||||||||    
T  7824541 ttgcaatttcggcatttgccagttgagctaggacttctagaca 7824583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 196
Target Start/End: Original strand, 29689569 - 29689611
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagaca 196  Q
    |||||||||||||||||| |||||||||||||  |||||||||    
T  29689569 ttgcaatttcggcatttgccagttgagctaggacttctagaca 29689611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 33334665 - 33334607
Alignment:
Q  138 gtcacaacgttcggtattgcaatttcggcatttgtcagttgagctaggctttctagaca 196  Q
    |||||||||| |||  ||||||||||||||||||  ||||||||||||  |||||||||    
T  33334665 gtcacaacgtccggctttgcaatttcggcatttgcaagttgagctaggacttctagaca 33334607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 4601466 - 4601425
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||||||||||| |||||||||||||  ||||||||    
T  4601466 ttgcaatttcggcatttgccagttgagctaggacttctagac 4601425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 42392892 - 42392933
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||||||||||| |||||||||||||  ||||||||    
T  42392892 ttgcaatttcggcatttgccagttgagctaggacttctagac 42392933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 43247721 - 43247778
Alignment:
Q  138 gtcacaacgttcggtattgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||| |||  ||||||||| |||||||| |||||||||||||  ||||||||    
T  43247721 gtcacaacgtccggccttgcaattttggcatttgccagttgagctaggacttctagac 43247778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 51666012 - 51666053
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||||||||||| |||||||||||||  ||||||||    
T  51666012 ttgcaatttcggcatttgccagttgagctaggacttctagac 51666053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 54151768 - 54151809
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||||||||||| |||||||||||||  ||||||||    
T  54151768 ttgcaatttcggcatttgccagttgagctaggacttctagac 54151809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 54158307 - 54158266
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||||||||||| |||||||||||||  ||||||||    
T  54158307 ttgcaatttcggcatttgccagttgagctaggacttctagac 54158266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000006; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 35545989 - 35545948
Alignment:
Q  139 tcacaacgttcggtattgcaatttcggcatttgtcagttgag 180  Q
    |||| ||||||||| |||||||||||||||||||||||||||    
T  35545989 tcacgacgttcggttttgcaatttcggcatttgtcagttgag 35545948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 4825010 - 4825066
Alignment:
Q  138 gtcacaacgttcggtattgcaatttcggcatttgtcagttgagctaggctttctaga 194  Q
    |||||||||| |||  |||||||||||||||||| |||||||||||||  |||||||    
T  4825010 gtcacaacgtccggccttgcaatttcggcatttgccagttgagctaggacttctaga 4825066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 35317784 - 35317828
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagacagt 198  Q
    |||||||||||||||||| |||||||||||||  |||||||||||    
T  35317784 ttgcaatttcggcatttgccagttgagctaggacttctagacagt 35317828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 40177681 - 40177623
Alignment:
Q  138 gtcacaacgttcggtattgcaatttcggcatttgtcagttgagctaggctttctagaca 196  Q
    |||||||||| |||  ||||||||||| |||||||||||| |||||||  |||||||||    
T  40177681 gtcacaacgtccggccttgcaatttcgacatttgtcagttaagctaggacttctagaca 40177623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 13203998 - 13203957
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||||||||||| |||||||||||||  ||||||||    
T  13203998 ttgcaatttcggcatttgccagttgagctaggacttctagac 13203957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 31; Significance: 0.00000004; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 2146693 - 2146635
Alignment:
Q  138 gtcacaacgttcggtattgcaatttcggcatttgtcagttgagctaggctttctagaca 196  Q
    |||||||||| |||  |||||||||||||||||  |||||||||||||  |||||||||    
T  2146693 gtcacaacgtccggccttgcaatttcggcattttccagttgagctaggacttctagaca 2146635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 184
Target Start/End: Complemental strand, 5587321 - 5587291
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctag 184  Q
    |||||||||||||||||||||||||||||||    
T  5587321 ttgcaatttcggcatttgtcagttgagctag 5587291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 184
Target Start/End: Complemental strand, 5592282 - 5592252
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctag 184  Q
    |||||||||||||||||||||||||||||||    
T  5592282 ttgcaatttcggcatttgtcagttgagctag 5592252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 196
Target Start/End: Original strand, 31770619 - 31770661
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagaca 196  Q
    |||||||||||||||||| |||||||||||||  |||||||||    
T  31770619 ttgcaatttcggcatttgccagttgagctaggacttctagaca 31770661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 44083997 - 44083939
Alignment:
Q  138 gtcacaacgttcggtattgcaatttcggcatttgtcagttgagctaggctttctagaca 196  Q
    |||||||||| |||  ||||||||| |||||||| |||||||||||||  |||||||||    
T  44083997 gtcacaacgtccggccttgcaattttggcatttgccagttgagctaggacttctagaca 44083939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 40643012 - 40642971
Alignment:
Q  157 caatttcggcatttgtcagttgagctaggctttctagacagt 198  Q
    |||||||| |||||||||||||||||| | ||||||||||||    
T  40643012 caatttcgacatttgtcagttgagctaagatttctagacagt 40642971  T

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Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 47250338 - 47250378
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctaga 194  Q
    |||||||||||||||||| |||||||||||||  |||||||    
T  47250338 ttgcaatttcggcatttgccagttgagctaggacttctaga 47250378  T

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Target: chr6 (Bit Score: 31; Significance: 0.00000004; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 33621535 - 33621493
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagaca 196  Q
    |||||||||||||||||| |||||||||||||  |||||||||    
T  33621535 ttgcaatttcggcatttgccagttgagctaggacttctagaca 33621493  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 182
Target Start/End: Complemental strand, 14495683 - 14495642
Alignment:
Q  141 acaacgttcggtattgcaatttcggcatttgtcagttgagct 182  Q
    ||||||||| || ||||||||||||||||||| |||||||||    
T  14495683 acaacgttcagtcttgcaatttcggcatttgttagttgagct 14495642  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 21000733 - 21000692
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||||||||||| |||||||||||||  ||||||||    
T  21000733 ttgcaatttcggcatttgccagttgagctaggacttctagac 21000692  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 33704257 - 33704216
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||||||||||| |||||||||||||  ||||||||    
T  33704257 ttgcaatttcggcatttgccagttgagctaggacttctagac 33704216  T

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Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 35218699 - 35218756
Alignment:
Q  138 gtcacaacgttcggtattgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||| |||  ||||||||| |||||||| |||||||||||||  ||||||||    
T  35218699 gtcacaacgtccggccttgcaattttggcatttgccagttgagctaggacttctagac 35218756  T

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Target: scaffold1348 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1348
Description:

Target: scaffold1348; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 949 - 990
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||||||||||| |||||||||||||  ||||||||    
T  949 ttgcaatttcggcatttgccagttgagctaggacttctagac 990  T

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Target: scaffold0044 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 10060 - 10101
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||||||||||| |||||||||||||  ||||||||    
T  10060 ttgcaatttcggcatttgccagttgagctaggacttctagac 10101  T

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Target: scaffold0032 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 56522 - 56481
Alignment:
Q  154 ttgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    |||||||||||||||||| |||||||||||||  ||||||||    
T  56522 ttgcaatttcggcatttgccagttgagctaggacttctagac 56481  T

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Target: scaffold0119 (Bit Score: 29; Significance: 0.0000006; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 14023 - 14079
Alignment:
Q  139 tcacaacgttcggtattgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    ||||||||| |||  |||||||||||| ||||| |||||||||||||  ||||||||    
T  14023 tcacaacgtccggccttgcaatttcggtatttgccagttgagctaggacttctagac 14079  T

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Target: scaffold0119; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 19703 - 19759
Alignment:
Q  139 tcacaacgttcggtattgcaatttcggcatttgtcagttgagctaggctttctagac 195  Q
    ||||||||| |||  |||||||||||| ||||| |||||||||||||  ||||||||    
T  19703 tcacaacgtccggccttgcaatttcggtatttgccagttgagctaggacttctagac 19759  T

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Target: scaffold0067 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 185
Target Start/End: Complemental strand, 34876 - 34828
Alignment:
Q  137 tgtcacaacgttcggtattgcaatttcggcatttgtcagttgagctagg 185  Q
    |||||| |||| |||  |||||||||||||||||| |||||||||||||    
T  34876 tgtcacgacgtccggccttgcaatttcggcatttgccagttgagctagg 34828  T

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