View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8517_high_12 (Length: 237)

Name: NF8517_high_12
Description: NF8517
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8517_high_12
NF8517_high_12
[»] chr3 (38 HSPs)
chr3 (3-224)||(53952046-53952267)
chr3 (131-189)||(34954115-34954172)
chr3 (133-189)||(5391912-5391968)
chr3 (121-189)||(45541604-45541672)
chr3 (131-189)||(39723219-39723277)
chr3 (121-189)||(21367700-21367769)
chr3 (116-187)||(26878235-26878307)
chr3 (118-224)||(53736086-53736189)
chr3 (115-189)||(39980762-39980837)
chr3 (136-220)||(9279310-9279391)
chr3 (140-194)||(36101596-36101650)
chr3 (140-194)||(36139906-36139960)
chr3 (131-189)||(50600157-50600215)
chr3 (151-188)||(2128257-2128294)
chr3 (138-191)||(38318991-38319044)
chr3 (133-181)||(39723381-39723429)
chr3 (135-194)||(27290884-27290943)
chr3 (130-189)||(49465643-49465702)
chr3 (121-186)||(402510-402576)
chr3 (131-189)||(5396230-5396288)
chr3 (121-195)||(21574517-21574591)
chr3 (133-195)||(23808045-23808107)
chr3 (121-195)||(27896139-27896213)
chr3 (121-183)||(32711464-32711526)
chr3 (149-195)||(40665456-40665502)
chr3 (130-184)||(53762372-53762426)
chr3 (133-189)||(901957-902014)
chr3 (122-179)||(2413649-2413706)
chr3 (154-195)||(3044261-3044302)
chr3 (154-195)||(25925769-25925810)
chr3 (130-183)||(29427623-29427676)
chr3 (130-187)||(30573892-30573949)
chr3 (121-189)||(46031023-46031092)
chr3 (115-195)||(14548684-14548764)
chr3 (130-189)||(25453836-25453896)
chr3 (135-179)||(27787054-27787098)
chr3 (115-195)||(30923862-30923941)
chr3 (117-189)||(47249451-47249523)
[»] chr5 (36 HSPs)
chr5 (130-228)||(17258861-17258956)
chr5 (130-195)||(499709-499774)
chr5 (121-185)||(912616-912680)
chr5 (133-189)||(3977341-3977397)
chr5 (121-187)||(7808540-7808607)
chr5 (129-195)||(10125695-10125761)
chr5 (129-195)||(17368703-17368769)
chr5 (121-224)||(2568659-2568759)
chr5 (110-195)||(37611173-37611258)
chr5 (110-195)||(37787903-37787988)
chr5 (154-190)||(25461318-25461354)
chr5 (131-195)||(35445822-35445886)
chr5 (115-195)||(37526162-37526242)
chr5 (115-195)||(37690599-37690679)
chr5 (135-194)||(2880530-2880589)
chr5 (119-224)||(18704004-18704105)
chr5 (156-195)||(28413288-28413327)
chr5 (110-189)||(37968911-37968989)
chr5 (157-195)||(7984996-7985034)
chr5 (136-194)||(11700362-11700420)
chr5 (141-195)||(14331394-14331448)
chr5 (131-189)||(18857377-18857435)
chr5 (129-194)||(8089964-8090029)
chr5 (129-194)||(13604826-13604891)
chr5 (134-190)||(3280696-3280752)
chr5 (157-189)||(4014429-4014461)
chr5 (121-189)||(4619740-4619808)
chr5 (131-195)||(7674675-7674739)
chr5 (134-195)||(8089308-8089371)
chr5 (115-186)||(16457941-16458013)
chr5 (130-189)||(29925874-29925934)
chr5 (115-195)||(37588323-37588403)
chr5 (135-183)||(37794681-37794729)
chr5 (130-189)||(39105497-39105557)
chr5 (115-175)||(39248146-39248206)
chr5 (131-195)||(41112877-41112941)
[»] chr1 (38 HSPs)
chr1 (115-195)||(31517703-31517783)
chr1 (132-195)||(35925717-35925780)
chr1 (121-186)||(4481966-4482031)
chr1 (114-188)||(11941296-11941371)
chr1 (141-195)||(6292520-6292574)
chr1 (110-195)||(7575657-7575741)
chr1 (130-195)||(10199386-10199451)
chr1 (115-195)||(4445735-4445815)
chr1 (135-195)||(11639399-11639459)
chr1 (121-189)||(28689421-28689489)
chr1 (133-189)||(33723363-33723419)
chr1 (115-183)||(37811891-37811959)
chr1 (135-224)||(25479582-25479668)
chr1 (115-189)||(2777925-2777999)
chr1 (115-189)||(10280682-10280756)
chr1 (132-185)||(17577689-17577743)
chr1 (131-189)||(37842334-37842392)
chr1 (133-194)||(37593665-37593726)
chr1 (154-190)||(1509967-1510003)
chr1 (131-187)||(1565514-1565570)
chr1 (131-195)||(14443476-14443540)
chr1 (133-189)||(31118076-31118132)
chr1 (115-179)||(38001639-38001703)
chr1 (130-194)||(38170668-38170732)
chr1 (131-195)||(43338143-43338207)
chr1 (130-189)||(10744334-10744393)
chr1 (129-184)||(24460384-24460439)
chr1 (121-195)||(45975717-45975792)
chr1 (115-189)||(34290269-34290343)
chr1 (133-194)||(38578555-38578617)
chr1 (115-149)||(51929425-51929459)
chr1 (134-183)||(4699597-4699646)
chr1 (165-224)||(5090863-5090919)
chr1 (140-185)||(10854770-10854815)
chr1 (130-182)||(4549888-4549940)
chr1 (121-189)||(4576838-4576906)
chr1 (115-190)||(27820159-27820234)
chr1 (130-189)||(38503442-38503502)
[»] chr6 (27 HSPs)
chr6 (135-194)||(28641732-28641791)
chr6 (131-189)||(31624123-31624181)
chr6 (131-189)||(696635-696693)
chr6 (122-188)||(33832243-33832309)
chr6 (131-189)||(1575928-1575986)
chr6 (129-195)||(32205990-32206056)
chr6 (121-189)||(9912159-9912228)
chr6 (117-190)||(10616678-10616751)
chr6 (123-188)||(32577957-32578022)
chr6 (133-181)||(696483-696531)
chr6 (130-190)||(34404703-34404763)
chr6 (115-195)||(34939771-34939851)
chr6 (131-189)||(1575783-1575842)
chr6 (116-186)||(2455295-2455366)
chr6 (115-189)||(2735102-2735177)
chr6 (123-194)||(13908491-13908562)
chr6 (130-189)||(20368158-20368217)
chr6 (154-188)||(821833-821867)
chr6 (132-185)||(769175-769228)
chr6 (154-195)||(4420670-4420711)
chr6 (138-183)||(22743520-22743565)
chr6 (115-188)||(33089540-33089613)
chr6 (115-184)||(33737608-33737677)
chr6 (131-187)||(8364955-8365011)
chr6 (115-174)||(9559384-9559444)
chr6 (123-223)||(24670419-24670519)
chr6 (121-189)||(32171352-32171420)
[»] chr8 (27 HSPs)
chr8 (133-195)||(12851203-12851265)
chr8 (115-195)||(11569420-11569500)
chr8 (116-195)||(42215270-42215349)
chr8 (121-189)||(10120789-10120858)
chr8 (110-183)||(11185260-11185333)
chr8 (116-189)||(30389132-30389205)
chr8 (131-183)||(3254264-3254316)
chr8 (130-194)||(13459673-13459737)
chr8 (132-194)||(10383913-10383975)
chr8 (130-195)||(2458544-2458609)
chr8 (110-195)||(11415181-11415266)
chr8 (154-195)||(20672777-20672818)
chr8 (121-189)||(5069730-5069798)
chr8 (130-194)||(8066748-8066812)
chr8 (129-188)||(10114523-10114583)
chr8 (115-183)||(14949905-14949973)
chr8 (121-188)||(32840954-32841022)
chr8 (115-186)||(2487971-2488042)
chr8 (135-194)||(43368683-43368742)
chr8 (135-189)||(9835883-9835937)
chr8 (130-186)||(1930071-1930128)
chr8 (130-195)||(7646233-7646298)
chr8 (165-224)||(38561727-38561783)
chr8 (115-180)||(41442416-41442481)
chr8 (129-189)||(7111301-7111361)
chr8 (115-195)||(30918140-30918219)
chr8 (115-195)||(41606866-41606946)
[»] scaffold0608 (1 HSPs)
scaffold0608 (121-186)||(9606-9671)
[»] chr4 (27 HSPs)
chr4 (112-189)||(45128270-45128347)
chr4 (115-195)||(1137739-1137819)
chr4 (117-184)||(25571298-25571365)
chr4 (118-195)||(22236071-22236148)
chr4 (119-224)||(49219140-49219242)
chr4 (121-195)||(50742805-50742879)
chr4 (130-224)||(28615335-28615427)
chr4 (130-194)||(18011899-18011963)
chr4 (123-191)||(48719362-48719430)
chr4 (121-188)||(2996607-2996674)
chr4 (123-194)||(37575907-37575978)
chr4 (115-189)||(3176067-3176141)
chr4 (133-195)||(20936210-20936272)
chr4 (136-224)||(24929494-24929579)
chr4 (137-195)||(30066751-30066809)
chr4 (165-194)||(6978975-6979004)
chr4 (154-195)||(7694012-7694053)
chr4 (129-194)||(28300276-28300341)
chr4 (154-195)||(29467626-29467667)
chr4 (119-180)||(37863921-37863982)
chr4 (133-186)||(37864333-37864386)
chr4 (154-195)||(55084483-55084524)
chr4 (115-159)||(25434375-25434419)
chr4 (121-189)||(42461284-42461352)
chr4 (139-195)||(44249312-44249368)
chr4 (131-182)||(49939929-49939981)
chr4 (137-189)||(52746825-52746877)
[»] chr2 (45 HSPs)
chr2 (130-195)||(35378994-35379059)
chr2 (115-191)||(787363-787439)
chr2 (131-195)||(1647263-1647327)
chr2 (130-189)||(35378510-35378569)
chr2 (130-186)||(16451154-16451211)
chr2 (116-195)||(27237857-27237936)
chr2 (121-195)||(28677628-28677702)
chr2 (130-188)||(33256774-33256832)
chr2 (121-195)||(43529827-43529901)
chr2 (121-186)||(1494415-1494480)
chr2 (131-184)||(5902528-5902581)
chr2 (121-194)||(8820261-8820334)
chr2 (130-194)||(3067357-3067421)
chr2 (119-195)||(35555154-35555230)
chr2 (115-195)||(41041985-41042065)
chr2 (123-190)||(2964780-2964847)
chr2 (123-186)||(4350726-4350789)
chr2 (130-189)||(31096334-31096393)
chr2 (127-194)||(32614923-32614990)
chr2 (132-195)||(40158745-40158808)
chr2 (136-186)||(680539-680589)
chr2 (115-189)||(32364694-32364768)
chr2 (110-168)||(32837377-32837435)
chr2 (133-195)||(33941936-33941998)
chr2 (121-195)||(41817195-41817269)
chr2 (123-189)||(43717107-43717173)
chr2 (131-189)||(44606089-44606147)
chr2 (115-184)||(7782782-7782851)
chr2 (136-189)||(9595291-9595344)
chr2 (130-195)||(12313151-12313216)
chr2 (165-194)||(17775479-17775508)
chr2 (130-179)||(18962015-18962064)
chr2 (154-195)||(19333327-19333368)
chr2 (136-189)||(22681169-22681222)
chr2 (135-195)||(24097835-24097896)
chr2 (115-187)||(36534803-36534876)
chr2 (132-184)||(2091014-2091066)
chr2 (130-189)||(4606958-4607018)
chr2 (121-189)||(13220466-13220534)
chr2 (131-195)||(33192229-33192293)
chr2 (154-224)||(33942151-33942218)
chr2 (131-195)||(42907388-42907452)
chr2 (157-189)||(43511118-43511150)
chr2 (130-189)||(43570447-43570506)
chr2 (139-183)||(44438826-44438870)
[»] chr7 (25 HSPs)
chr7 (131-189)||(43219623-43219681)
chr7 (131-189)||(11048060-11048118)
chr7 (131-189)||(15740390-15740448)
chr7 (123-181)||(19719047-19719105)
chr7 (130-186)||(33678816-33678873)
chr7 (154-194)||(6552294-6552334)
chr7 (115-195)||(25670549-25670629)
chr7 (123-183)||(36598327-36598387)
chr7 (133-181)||(43219785-43219833)
chr7 (131-189)||(15740534-15740593)
chr7 (121-188)||(30535597-30535664)
chr7 (130-187)||(39967955-39968013)
chr7 (121-195)||(46082063-46082137)
chr7 (129-186)||(13960700-13960757)
chr7 (115-187)||(20526481-20526554)
chr7 (115-192)||(33894657-33894734)
chr7 (136-189)||(38010747-38010800)
chr7 (134-195)||(43250681-43250742)
chr7 (119-187)||(5276266-5276334)
chr7 (154-194)||(27496409-27496449)
chr7 (154-194)||(27503067-27503107)
chr7 (115-224)||(27863687-27863794)
chr7 (155-187)||(39907838-39907870)
chr7 (119-195)||(44615071-44615147)
chr7 (121-189)||(44808191-44808259)


Alignment Details
Target: chr3 (Bit Score: 218; Significance: 1e-120; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 3 - 224
Target Start/End: Complemental strand, 53952267 - 53952046
Alignment:
Q  3 ataaaaatagcttatacaaagtttagaaaatgagttttctcacattatagcttcagttatatcaaaaaacagttgggcctgtttgtataggcttagttga 102  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53952267 ataaaaatagcttatacaaagtttagaaaacgagttttctcacattatagcttcagttatatcaaaaaacagttgggcctgtttgtataggcttagttga 53952168  T
Q  103 gattatcgtacatgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctcggttatt 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53952167 gattatcgtacatgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctcggttatt 53952068  T
Q  203 atagtttatgaaaacaacttat 224  Q
    ||||||||||||||||||||||    
T  53952067 atagtttatgaaaacaacttat 53952046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 34954172 - 34954115
Alignment:
Q  131 agaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  34954172 agaacttgtgaaaacagct-atgacatgttcatgagctgttttcagcttattttcataa 34954115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 5391968 - 5391912
Alignment:
Q  133 aacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||||||||||||||| || |||||||||| ||||||||||| |||||||||||||    
T  5391968 aacttatgaaaacagcttatgacatgttcataagctgttttcaacttattttcataa 5391912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 45541672 - 45541604
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||||||  ||||||||||||||||||| || |||||||||| |||||||||||| ||||| ||||||    
T  45541672 actgtttagaagaacttatgaaaacagcttatgacatgttcataagctgttttcaggttattctcataa 45541604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 39723219 - 39723277
Alignment:
Q  131 agaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||||||| ||||||||| || |||||||||| |||||||||||||||||| ||||||    
T  39723219 agaacttatcaaaacagcttatgacatgttcataagctgttttcagcttattctcataa 39723277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 21367769 - 21367700
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacat-gttcatgagctgttttcagcttattttcataa 189  Q
    |||||||  |||||||||||||||||||| || |||| |||||  |||||||||||||||||||||||||    
T  21367769 actgtttgggagaacttatgaaaacagcttatgacattgttcacaagctgttttcagcttattttcataa 21367700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 26878307 - 26878235
Alignment:
Q  116 gtgaaactgtttaagagaacttatgaaaacagctgataacat-gttcatgagctgttttcagcttattttcat 187  Q
    |||||||||||| ||||||||| |||||| |||| || |||| |||||| | |||||||||||||||||||||    
T  26878307 gtgaaactgtttgagagaacttgtgaaaatagcttatgacattgttcataaactgttttcagcttattttcat 26878235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 224
Target Start/End: Original strand, 53736086 - 53736189
Alignment:
Q  118 gaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctcggttattatagtttatgaaaac 217  Q
    |||||||||||||||| ||| || |||| ||  || |||||||||| || || ||||||||||||||||||||| ||   | | ||||| ||||||||||    
T  53736086 gaaactgtttaagagagcttctggaaaccgcgtattacatgttcataagttgctttcagcttattttcataaacact---tcagtataggttatgaaaac 53736182  T
Q  218 aacttat 224  Q
    |||||||    
T  53736183 aacttat 53736189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 189
Target Start/End: Complemental strand, 39980837 - 39980762
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatg-ttcatgagctgttttcagcttattttcataa 189  Q
    ||||| ||||||||||||||||||||||||||||| || ||  | ||||| |||| |||||| |||||||||||||    
T  39980837 tgtgagactgtttaagagaacttatgaaaacagcttatgactggtttcataagcttttttcaacttattttcataa 39980762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 9279310 - 9279391
Alignment:
Q  136 ttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctcggttattatagtttatgaaaacaac 220  Q
    ||||| |||||||| |||||||||  || ||||||||||||||||||| | ||||||||   | || ||||||||||||||||||    
T  9279310 ttatggaaacagcttataacatgtatataagctgttttcagcttatttccttaaactct---tcatgatagtttatgaaaacaac 9279391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 36101650 - 36101596
Alignment:
Q  140 gaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactct 194  Q
    |||||||||| || |||||||||  ||||||||||||||||||||||||| ||||    
T  36101650 gaaaacagcttatgacatgttcacaagctgttttcagcttattttcataagctct 36101596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 36139960 - 36139906
Alignment:
Q  140 gaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactct 194  Q
    |||||||||| || |||||||||  ||||||||||||||||||||||||| ||||    
T  36139960 gaaaacagcttatgacatgttcacaagctgttttcagcttattttcataagctct 36139906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 50600157 - 50600215
Alignment:
Q  131 agaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||||||| |||||| || || |||||| || ||||||||||||||||||||||||||    
T  50600157 agaacttataaaaacaactcatgacatgtccacgagctgttttcagcttattttcataa 50600215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 2128257 - 2128294
Alignment:
Q  151 ataacatgttcatgagctgttttcagcttattttcata 188  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  2128257 ataacatgttcataagctgttttcagcttattttcata 2128294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 191
Target Start/End: Complemental strand, 38319044 - 38318991
Alignment:
Q  138 atgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaac 191  Q
    ||||||||| || ||||||||||||| |||| |||||||||||||| |||||||    
T  38319044 atgaaaacaacttataacatgttcataagctattttcagcttatttccataaac 38318991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 39723381 - 39723429
Alignment:
Q  133 aacttatgaaaacagctgataacatgttcatgagctgttttcagcttat 181  Q
    ||||||||||||||||| || |||||||||| ||||||||| |||||||    
T  39723381 aacttatgaaaacagcttatgacatgttcataagctgtttttagcttat 39723429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 194
Target Start/End: Original strand, 27290884 - 27290943
Alignment:
Q  135 cttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactct 194  Q
    ||||||||||||||| || |||||  ||| ||||||||||||||||||| ||| ||||||    
T  27290884 cttatgaaaacagcttatgacatgcccataagctgttttcagcttatttccatgaactct 27290943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 189
Target Start/End: Original strand, 49465643 - 49465702
Alignment:
Q  130 gagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    |||||||||||||||||||| || |||||||||| || | |||| ||||||||| |||||    
T  49465643 gagaacttatgaaaacagcttattacatgttcattaggttttttaagcttatttccataa 49465702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 402510 - 402576
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacat-gttcatgagctgttttcagcttattttca 186  Q
    |||||||  |||||| ||||||||||||| || |||| |||||| |||||||||||||||| |||||    
T  402510 actgtttgggagaacgtatgaaaacagcttatgacattgttcataagctgttttcagcttaatttca 402576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 5396288 - 5396230
Alignment:
Q  131 agaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    |||||||||  |||||||| || ||||||| || || ||||||||||||||||||||||    
T  5396288 agaacttattgaaacagcttatgacatgttaataaggtgttttcagcttattttcataa 5396230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 195
Target Start/End: Complemental strand, 21574591 - 21574517
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||||  |||| |||||||||||| || || |||||||||| ||||| ||| ||||||||| ||||| |||||    
T  21574591 actgtttgggagagcttatgaaaacaacttatgacatgttcataagctgcttttagcttatttccataagctctc 21574517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 23808045 - 23808107
Alignment:
Q  133 aacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||||||||| ||||| || |||||||||  |  |||||||| |||||||||||||||||||    
T  23808045 aacttatgaaagcagcttatgacatgttcacaaattgttttcatcttattttcataaactctc 23808107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 195
Target Start/End: Original strand, 27896139 - 27896213
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||||| ||||| |||||||||||||| || ||| |||||| |  |||  |||||||||||||| ||||||||    
T  27896139 actgtttaggagaatttatgaaaacagctcatgacaagttcataaattgtcgtcagcttattttcaaaaactctc 27896213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 183
Target Start/End: Complemental strand, 32711526 - 32711464
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattt 183  Q
    ||||||| |||||||||||||||| |||| ||| |||||| ||  | ||||||||||||||||    
T  32711526 actgtttgagagaacttatgaaaatagcttatagcatgtttataggttgttttcagcttattt 32711464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 195
Target Start/End: Complemental strand, 40665502 - 40665456
Alignment:
Q  149 tgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||| |||||||||| |||||||||||||||||||| |||| |||||    
T  40665502 tgatgacatgttcataagctgttttcagcttatttttataagctctc 40665456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 53762372 - 53762426
Alignment:
Q  130 gagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttatttt 184  Q
    ||||| || ||||||||||| || |||||||||| ||||||||||| ||||||||    
T  53762372 gagaaattttgaaaacagcttatgacatgttcataagctgttttcaacttatttt 53762426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 902014 - 901957
Alignment:
Q  133 aacttatgaaaacagctgataacatgtt-catgagctgttttcagcttattttcataa 189  Q
    ||||||||||||||||| ||||||| || ||| |||| |||||| |||||||||||||    
T  902014 aacttatgaaaacagctaataacattttccataagcttttttcaacttattttcataa 901957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 2413649 - 2413706
Alignment:
Q  122 ctgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagctt 179  Q
    |||||| ||||| ||||||||||| ||| || |||||| ||||||||||||| |||||    
T  2413649 ctgtttgagagagcttatgaaaacggctcatgacatgtccatgagctgtttttagctt 2413706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 3044261 - 3044302
Alignment:
Q  154 acatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||||||| ||||||||||| ||||||||||||| |||||    
T  3044261 acatgttcataagctgttttcaacttattttcataagctctc 3044302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 25925810 - 25925769
Alignment:
Q  154 acatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||||||| ||||||||||| ||||||||||||| |||||    
T  25925810 acatgttcataagctgttttcaacttattttcataagctctc 25925769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 29427623 - 29427676
Alignment:
Q  130 gagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattt 183  Q
    ||||||||||||||||| || || |||||||||| |||| |||||| |||||||    
T  29427623 gagaacttatgaaaacacctaatgacatgttcataagctattttcaacttattt 29427676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 30573892 - 30573949
Alignment:
Q  130 gagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcat 187  Q
    |||||||||||||||||  | ||  ||||||||| ||||||||||||||||| |||||    
T  30573892 gagaacttatgaaaacaaattatggcatgttcataagctgttttcagcttatgttcat 30573949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 46031092 - 46031023
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacatg-ttcatgagctgttttcagcttattttcataa 189  Q
    ||||||| |||||||||| |||||||||  || ||||  ||||| |||||||||||||||||||| ||||    
T  46031092 actgtttcagagaacttacgaaaacagcctatgacattattcataagctgttttcagcttattttaataa 46031023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 14548684 - 14548764
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||| ||||||| ||||| |||||||||||| |  || |||| || ||  |||||||||||||||||| ||||| |||||    
T  14548684 tgtgagactgtttgagagagcttatgaaaacaacgtatgacattttaataggctgttttcagcttatttccataagctctc 14548764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 189
Target Start/End: Original strand, 25453836 - 25453896
Alignment:
Q  130 gagaacttatgaaaacagctgat-aacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||| |||||||||||||| || || |||||||  |||| ||||||||||||||||||||    
T  25453836 gagaatttatgaaaacagcttatgaaaatgttcacaagctcttttcagcttattttcataa 25453896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 27787098 - 27787054
Alignment:
Q  135 cttatgaaaacagctgataacatgttcatgagctgttttcagctt 179  Q
    ||||||||||| ||| || |||||||||| |||||||||||||||    
T  27787098 cttatgaaaacggcttatcacatgttcataagctgttttcagctt 27787054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 30923862 - 30923941
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||| |||||||| |||| || ||| |||||||| || ||||||  || |||||||||||||||||||  ||||||||||    
T  30923862 tgtgagactgtttatgagagct-atggaaacagcttatgacatgtctataagctgttttcagcttatttctataaactctc 30923941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 47249451 - 47249523
Alignment:
Q  117 tgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||| ||||| | |||||||||||||||  || || |||||||||| || ||||||  ||||||||||||||    
T  47249451 tgaaattgtttgaaagaacttatgaaaaccacttatgacatgttcataagttgtttttggcttattttcataa 47249523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 9e-17; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 130 - 228
Target Start/End: Original strand, 17258861 - 17258956
Alignment:
Q  130 gagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctcggttattatagtttatgaaaacaacttattgat 228  Q
    |||||| |||||||| |||| || |||||||||| ||||||||||||||||||||||||| ||||   | |  |||||||||||||||| |||||||||    
T  17258861 gagaacctatgaaaatagcttatgacatgttcataagctgttttcagcttattttcataagctct---tcaggatagtttatgaaaacagcttattgat 17258956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 499709 - 499774
Alignment:
Q  130 gagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||||||||||||||||| || ||||||| |  || |||||||||||||||| |||||||||||    
T  499709 gagaacttatgaaaacagcttatgacatgttaacaagttgttttcagcttatttccataaactctc 499774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 912616 - 912680
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttc 185  Q
    ||||||||  |||||||||||||| |||  | |||||||||| ||||||||||||||||||||||    
T  912616 actgtttagaagaacttatgaaaatagcatacaacatgttcacgagctgttttcagcttattttc 912680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 3977397 - 3977341
Alignment:
Q  133 aacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||||||||||||||| || |||||||| | |||||| ||||||||||||||||||    
T  3977397 aacttatgaaaacagcttatgacatgttccttagctgtcttcagcttattttcataa 3977341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 7808607 - 7808540
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacat-gttcatgagctgttttcagcttattttcat 187  Q
    |||||||  |||| |||||||||| |||| ||||||| |||||| |||||||||||||||||||||||    
T  7808607 actgtttgggagagcttatgaaaatagcttataacattgttcataagctgttttcagcttattttcat 7808540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 10125695 - 10125761
Alignment:
Q  129 agagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||||||||| ||||| || || ||||||| || || |||||||||||||||||||||| |||||    
T  10125695 agagaacttatgtaaacaacttatgacatgttgataaggtgttttcagcttattttcataagctctc 10125761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 195
Target Start/End: Complemental strand, 17368769 - 17368703
Alignment:
Q  129 agagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||||||||||||||| || || ||||||||||  || ||||||||||||||| ||||| |||||    
T  17368769 agagaacttatgaaaacaacttatgacatgttcatatgcagttttcagcttatttccataacctctc 17368703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 224
Target Start/End: Complemental strand, 2568759 - 2568659
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctcggttattatagtttatgaaaacaac 220  Q
    ||||||||  ||||||||||||||||||| || |||| ||||| || | |||| ||||||||||||| | |||||    || |||| |||||||||||||    
T  2568759 actgtttagaagaacttatgaaaacagcttatgacatattcataagttatttttagcttattttcattagctctc---catgatagcttatgaaaacaac 2568663  T
Q  221 ttat 224  Q
    ||||    
T  2568662 ttat 2568659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 195
Target Start/End: Original strand, 37611173 - 37611258
Alignment:
Q  110 gtacatgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||| ||||| | ||||| ||||| |||||||||||| ||  | |||||||||| |||||||||||| |||||| ||||| |||||    
T  37611173 gtacttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataagctctc 37611258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 195
Target Start/End: Original strand, 37787903 - 37787988
Alignment:
Q  110 gtacatgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||| ||||| | ||||| ||||| |||||||||||| ||  | |||||||||| |||||||||||| |||||| ||||| |||||    
T  37787903 gtacttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataagctctc 37787988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 25461318 - 25461354
Alignment:
Q  154 acatgttcatgagctgttttcagcttattttcataaa 190  Q
    |||||||||| ||||||||||||||||||||||||||    
T  25461318 acatgttcattagctgttttcagcttattttcataaa 25461354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 195
Target Start/End: Original strand, 35445822 - 35445886
Alignment:
Q  131 agaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||| |||||||||||||| ||||||||||||| ||   |||||| |||||||||||||| ||||    
T  35445822 agaatttatgaaaacagcttataacatgttcattaggcattttcaccttattttcataaattctc 35445886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 37526162 - 37526242
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||| ||||||| ||||| |||||||| ||| |  || ||||||| || ||||||||||||||||||| ||||| |||||    
T  37526162 tgtgagactgtttgagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctc 37526242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 37690599 - 37690679
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||| ||||||| ||||| |||||||| ||| |  || ||||||| || ||||||||||||||||||| ||||| |||||    
T  37690599 tgtgagactgtttgagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctc 37690679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 194
Target Start/End: Original strand, 2880530 - 2880589
Alignment:
Q  135 cttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactct 194  Q
    |||||| |||||||| || | |||||||| || |||||||||||||||| ||||||||||    
T  2880530 cttatggaaacagctaatgatatgttcataaggtgttttcagcttatttccataaactct 2880589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 18704004 - 18704105
Alignment:
Q  119 aaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctcggttattatagtttatgaaaaca 218  Q
    ||||||||||||||| |||||| ||||| || |||||||||  || || |||||||||||||||| |||||  |||   || | |||| |||||||||||    
T  18704004 aaactgtttaagagagcttatg-aaacaacttataacatgtctataagttgttttcagcttatttccataagatct---ttgtaatagcttatgaaaaca 18704099  T
Q  219 acttat 224  Q
    ||||||    
T  18704100 acttat 18704105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Original strand, 28413288 - 28413327
Alignment:
Q  156 atgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  28413288 atgttcataagctgttttcagcttatttccataaactctc 28413327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 37968989 - 37968911
Alignment:
Q  110 gtacatgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    |||| ||||||||||||| ||||| |||||||||| || |  |||||||| ||| ||||||||| |||||||||| ||||    
T  37968989 gtacttgtgaaactgtttgagagatcttatgaaaatagat-ttaacatgtccataagctgtttttagcttatttttataa 37968911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 7985034 - 7984996
Alignment:
Q  157 tgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  7985034 tgttcataagctgttttcagcttattttcataaattctc 7984996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 11700362 - 11700420
Alignment:
Q  136 ttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactct 194  Q
    ||||| ||||| || || |||||| ||| |||||||||||| |||||||||||||||||    
T  11700362 ttatggaaacaacttatgacatgtccataagctgttttcagattattttcataaactct 11700420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 14331448 - 14331394
Alignment:
Q  141 aaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||||||| || |||||| ||| ||||| ||||||||||||||||||| |||||    
T  14331448 aaaacagcttatgacatgtccataagctgatttcagcttattttcataagctctc 14331394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 18857377 - 18857435
Alignment:
Q  131 agaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    |||| |||||||||||||| || |||||||||| ||||||||| | |||| ||||||||    
T  18857377 agaatttatgaaaacagctaatgacatgttcataagctgtttttaacttaatttcataa 18857435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 8090029 - 8089964
Alignment:
Q  129 agagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactct 194  Q
    ||||| |||||||||||| || || | || ||| | ||||||||||||||||||||||||| ||||    
T  8090029 agagagcttatgaaaacaacttatgatatattcctaagctgttttcagcttattttcataagctct 8089964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 13604826 - 13604891
Alignment:
Q  129 agagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactct 194  Q
    ||||| ||||||||||||||| || |||||| |||  | |||||||| ||||||||||||| ||||    
T  13604826 agagagcttatgaaaacagcttatgacatgtccatacgttgttttcaacttattttcataagctct 13604891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 190
Target Start/End: Original strand, 3280696 - 3280752
Alignment:
Q  134 acttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaa 190  Q
    |||||||||||||||| || |||| ||||| |||| |||| || |||||||||||||    
T  3280696 acttatgaaaacagcttatgacatcttcataagctctttttagtttattttcataaa 3280752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 189
Target Start/End: Original strand, 4014429 - 4014461
Alignment:
Q  157 tgttcatgagctgttttcagcttattttcataa 189  Q
    ||||||| |||||||||||||||||||||||||    
T  4014429 tgttcataagctgttttcagcttattttcataa 4014461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 4619808 - 4619740
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    |||||||  |||| |||||||||||| || || |||||||||| ||||| ||||| ||||||| |||||    
T  4619808 actgtttgggagagcttatgaaaacaactaatgacatgttcataagctggtttcaccttatttccataa 4619740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 195
Target Start/End: Complemental strand, 7674739 - 7674675
Alignment:
Q  131 agaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||||||| ||||| || || ||||||| || || ||||||||||||||||||| ||| ||||    
T  7674739 agaacttatggaaacaacttatgacatgtttataaggtgttttcagcttattttcacaaattctc 7674675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 195
Target Start/End: Complemental strand, 8089371 - 8089308
Alignment:
Q  134 acttatgaaaacagctgataacatgt--tcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||||||||||||  || ||||||  |||| | ||||||||||||||||||||||| |||||    
T  8089371 acttatgaaaacagcgtatgacatgtgctcataatctgttttcagcttattttcataagctctc 8089308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 186
Target Start/End: Original strand, 16457941 - 16458013
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataaca-tgttcatgagctgttttcagcttattttca 186  Q
    ||||| |||||||  |||||||||||||||||||| || ||| | ||||| |||| ||||||| |||||||||    
T  16457941 tgtgagactgtttgggagaacttatgaaaacagcttatgacagttttcataagctcttttcagtttattttca 16458013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 189
Target Start/End: Complemental strand, 29925934 - 29925874
Alignment:
Q  130 gagaacttatgaaaacagctgataac-atgttcatgagctgttttcagcttattttcataa 189  Q
    |||||||||||||||||||| || || ||||||||| | | |||||| |||||||||||||    
T  29925934 gagaacttatgaaaacagcttatgacaatgttcatgtgtttttttcaacttattttcataa 29925874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 37588323 - 37588403
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||| ||||||| ||||| |||||||| ||| |  || | ||||| || ||||||||||||||||||| ||||| |||||    
T  37588323 tgtgagactgtttgagagagcttatgaatacaacctatgaaatgttaataagctgttttcagcttatttccataagctctc 37588403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 37794681 - 37794729
Alignment:
Q  135 cttatgaaaacagctgataacatgttcatgagctgttttcagcttattt 183  Q
    |||||||||||| || || |||||||||| ||||||||| |||||||||    
T  37794681 cttatgaaaacaacttatgacatgttcataagctgttttgagcttattt 37794729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 189
Target Start/End: Complemental strand, 39105557 - 39105497
Alignment:
Q  130 gagaacttatgaaaacagctgataacat-gttcatgagctgttttcagcttattttcataa 189  Q
    ||||| |||||||||||||| || |||| |||||| |||| |||| |||||||||||||||    
T  39105557 gagaatttatgaaaacagcttatgacattgttcataagctatttttagcttattttcataa 39105497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 39248206 - 39248146
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttca 175  Q
    ||||| |||||||  |||||||||| ||||||||| || || ||||||| |||||||||||    
T  39248206 tgtgagactgtttgggagaacttataaaaacagcttatgacttgttcataagctgttttca 39248146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 195
Target Start/End: Original strand, 41112877 - 41112941
Alignment:
Q  131 agaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||||||||||| ||||  | |||||||| | | |||||||| |||||||||||||| |||||    
T  41112877 agaacttatgaaaatagcttctgacatgttcgtaatctgttttcggcttattttcataagctctc 41112941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 9e-17; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 31517703 - 31517783
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||| |||||||  |||||||||| |||||| || || |||||||||| ||||||||||||||||||||||||| |||||    
T  31517703 tgtgagactgtttgggagaacttatcaaaacaactcatgacatgttcataagctgttttcagcttattttcataagctctc 31517783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 195
Target Start/End: Complemental strand, 35925780 - 35925717
Alignment:
Q  132 gaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||||||||||||||| || |||||||||| ||||||||||| ||||||| |||||||||||    
T  35925780 gaacttatgaaaacagcttatgacatgttcataagctgttttcaacttatttccataaactctc 35925717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 4482031 - 4481966
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttca 186  Q
    ||||||| |||||||||||||||||| || || |||||||||| ||||||||| ||||||||||||    
T  4482031 actgtttgagagaacttatgaaaacaacttattacatgttcataagctgtttttagcttattttca 4481966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 188
Target Start/End: Complemental strand, 11941371 - 11941296
Alignment:
Q  114 atgtgaaactgtttaagagaacttatgaaaacagctgataacat-gttcatgagctgttttcagcttattttcata 188  Q
    |||||| |||||||  |||| |||||||||| |||| ||||||| |||||| ||||||||||||||||||||||||    
T  11941371 atgtgagactgtttgggagagcttatgaaaatagcttataacattgttcataagctgttttcagcttattttcata 11941296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 6292574 - 6292520
Alignment:
Q  141 aaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||||||| || |||||||||| ||||||||||||||||||||||||| |||||    
T  6292574 aaaacagcttatgacatgttcataagctgttttcagcttattttcataagctctc 6292520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 195
Target Start/End: Original strand, 7575657 - 7575741
Alignment:
Q  110 gtacatgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||| ||||| ||||||||  ||||||||||||||  ||| || ||| |||||| |||||||| ||||||||||||||||||||||    
T  7575657 gtacttgtgagactgtttacaagaacttatgaaaatggcttatgacaggttcataagctgttt-cagcttattttcataaactctc 7575741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 10199386 - 10199451
Alignment:
Q  130 gagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||||| ||||||| |||| || |||||||||| || |||||||||||||||||||||| |||||    
T  10199386 gagaactcatgaaaatagcttatgacatgttcataagttgttttcagcttattttcataagctctc 10199451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 4445815 - 4445735
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||| |||||||  ||||| |||||||| ||||| ||||||||||||  ||||||||||| |||||||||| || |||||    
T  4445815 tgtgagactgtttgggagaatttatgaaagcagcttataacatgttcagaagctgttttcaacttattttcacaagctctc 4445735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 11639399 - 11639459
Alignment:
Q  135 cttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||||||||||||| || |||||| ||| ||||||||| ||||||||||||||| |||||    
T  11639399 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcataagctctc 11639459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 28689421 - 28689489
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||||| |||||||||| | |||||||| || |||||| ||| || ||||||||||||||||||||||    
T  28689421 actgttttagagaacttacggaaacagcttatgacatgtccataagttgttttcagcttattttcataa 28689489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 33723363 - 33723419
Alignment:
Q  133 aacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    |||||||| |||||||| || ||||||||||||| |||||||||||||||| |||||    
T  33723363 aacttatggaaacagctcatgacatgttcatgagatgttttcagcttatttccataa 33723419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 37811959 - 37811891
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattt 183  Q
    ||||| |||| || ||||||||||||||||||||| || |||||||||| | ||||||||| |||||||    
T  37811959 tgtgatactggttgagagaacttatgaaaacagcttatgacatgttcataaactgttttcaacttattt 37811891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 25479668 - 25479582
Alignment:
Q  135 cttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctcggttattatagtttatgaaaacaacttat 224  Q
    |||||||||| || | || |||||||||| || |||||||||||||||||||||| |||||   ||  |||| |||||||||||||||||    
T  25479668 cttatgaaaatagattatgacatgttcattagttgttttcagcttattttcataagctctc---taggatagcttatgaaaacaacttat 25479582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 189
Target Start/End: Complemental strand, 2777999 - 2777925
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||| |||||||| |||||||||||||| || || || || | ||||| ||| |||||||||||||||||||||    
T  2777999 tgtgagactgtttaggagaacttatgaaaccaacttatgacgtattcataagccgttttcagcttattttcataa 2777925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 189
Target Start/End: Complemental strand, 10280756 - 10280682
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||| |||||| | ||||||||||||||||| || ||  ||||||||| |||| || |||||||||||||||||    
T  10280756 tgtgacactgttcaggagaacttatgaaaacaacttatttcatgttcataagcttttgtcagcttattttcataa 10280682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 17577689 - 17577743
Alignment:
Q  132 gaacttatgaaaacagctgataaca-tgttcatgagctgttttcagcttattttc 185  Q
    ||||||||||||||||||||||||| ||||||| |||||| || |||||||||||    
T  17577689 gaacttatgaaaacagctgataacattgttcataagctgtctttagcttattttc 17577743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 37842334 - 37842392
Alignment:
Q  131 agaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    |||||||||||||||| || || |||||||||| ||| |||||||||||||||| ||||    
T  37842334 agaacttatgaaaacatctaatgacatgttcataagcagttttcagcttatttttataa 37842392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 37593665 - 37593726
Alignment:
Q  133 aacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactct 194  Q
    |||| ||||| ||| || || |||||||||| ||||||||||||||||||||||||| ||||    
T  37593665 aactaatgaacacaacttatgacatgttcataagctgttttcagcttattttcataagctct 37593726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 1509967 - 1510003
Alignment:
Q  154 acatgttcatgagctgttttcagcttattttcataaa 190  Q
    |||||||||| ||||||||||||||||||||||||||    
T  1509967 acatgttcattagctgttttcagcttattttcataaa 1510003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 1565514 - 1565570
Alignment:
Q  131 agaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcat 187  Q
    |||||||| ||| |||||| || |||||| ||| |||||||||||||||||||||||    
T  1565514 agaacttaggaagacagcttatgacatgtgcataagctgttttcagcttattttcat 1565570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 195
Target Start/End: Complemental strand, 14443540 - 14443476
Alignment:
Q  131 agaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||| ||||||||||||||  |||||||||| | || |||||||| |||||||||||||| ||||    
T  14443540 agaatttatgaaaacagcttttaacatgttcgtaagttgttttcaccttattttcataaattctc 14443476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 31118132 - 31118076
Alignment:
Q  133 aacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    |||||||||||||| || || |||||||||| || |||||||||||||||| |||||    
T  31118132 aacttatgaaaacatcttatgacatgttcatcagttgttttcagcttatttccataa 31118076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 38001703 - 38001639
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagctt 179  Q
    ||||| |||||||  |||||||||||||||||||| || || ||||||| || ||||||||||||    
T  38001703 tgtgagactgtttgggagaacttatgaaaacagcttatgacctgttcataagttgttttcagctt 38001639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 38170668 - 38170732
Alignment:
Q  130 gagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactct 194  Q
    |||| ||||||||||||||| || |||||||||| || |||||||||||| ||||| ||| ||||    
T  38170668 gagagcttatgaaaacagcttatgacatgttcataagttgttttcagcttgttttcctaagctct 38170732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 195
Target Start/End: Complemental strand, 43338207 - 43338143
Alignment:
Q  131 agaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||||||| |||||||| || |||||||||| | || |||||||| ||||||||||| |||||    
T  43338207 agaacttatggaaacagcttatgacatgttcataatctattttcagcctattttcataagctctc 43338143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 189
Target Start/End: Complemental strand, 10744393 - 10744334
Alignment:
Q  130 gagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    |||||||| ||||||||||| ||  ||||||||| ||||||||||| |||||||| ||||    
T  10744393 gagaacttgtgaaaacagcttatggcatgttcataagctgttttcatcttatttttataa 10744334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 24460384 - 24460439
Alignment:
Q  129 agagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttatttt 184  Q
    |||||| ||||||||| |||| || |||||||||| |||||||| |||||||||||    
T  24460384 agagaaattatgaaaatagcttatgacatgttcataagctgtttccagcttatttt 24460439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 195
Target Start/End: Complemental strand, 45975792 - 45975717
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacatg-ttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||| | |||||| |||||||||||   |||||||  ||||| |||||||||||||||||||||||||| ||||    
T  45975792 actgttcaggagaacatatgaaaacagtgtataacattattcataagctgttttcagcttattttcataaattctc 45975717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 189
Target Start/End: Complemental strand, 34290343 - 34290269
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||||||| |||  ||||| |||| |||| |||| || |||| ||||| || ||||||||||||||||||||||    
T  34290343 tgtgaaactatttgggagaatttattaaaaaagcttatgacatattcataagttgttttcagcttattttcataa 34290269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 38578617 - 38578555
Alignment:
Q  133 aacttatgaaaacagctgataacatgttcatgagctgttttcagctta-ttttcataaactct 194  Q
    |||||||||||||| || ||||||| ||||| || |||||| |||||| ||||||||||||||    
T  38578617 aacttatgaaaacaacttataacatattcataagttgttttgagcttatttttcataaactct 38578555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 149
Target Start/End: Original strand, 51929425 - 51929459
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagct 149  Q
    ||||| |||||||||||||||||||||||||||||    
T  51929425 tgtgacactgtttaagagaacttatgaaaacagct 51929459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 4699597 - 4699646
Alignment:
Q  134 acttatgaaaacagctgataacatgttcatgagctgttttcagcttattt 183  Q
    ||||||||||||| || || |||||||||| ||||||||| |||||||||    
T  4699597 acttatgaaaacaacttatgacatgttcataagctgtttttagcttattt 4699646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 224
Target Start/End: Complemental strand, 5090919 - 5090863
Alignment:
Q  165 agctgttttcagcttattttcataaactctcggttattatagtttatgaaaacaacttat 224  Q
    |||||||||||||||||||||||||  ||||||    ||||||||||||||||| |||||    
T  5090919 agctgttttcagcttattttcataagatctcgg---gtatagtttatgaaaacagcttat 5090863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 10854815 - 10854770
Alignment:
Q  140 gaaaacagctgataacatgttcatgagctgttttcagcttattttc 185  Q
    |||||||||| || |||||||||  |||||||||||||||||||||    
T  10854815 gaaaacagcttatgacatgttcacaagctgttttcagcttattttc 10854770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 4549940 - 4549888
Alignment:
Q  130 gagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttatt 182  Q
    |||||||| ||||||||| | || |||||||||| || |||||||||||||||    
T  4549940 gagaacttctgaaaacagattatgacatgttcataagttgttttcagcttatt 4549888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 4576906 - 4576838
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||||| ||| |||||||||||| || | || ||||||| || || ||| ||||||||||||||||||    
T  4576906 actgtttgagacaacttatgaaaatagtttatgacatgtttataagttgtgttcagcttattttcataa 4576838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 27820159 - 27820234
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacat-gttcatgagctgttttcagcttattttcataaa 190  Q
    ||||| |||||||  ||||| ||||||||| |||| || |||| |||||| |||| |||||||||||||||||||||    
T  27820159 tgtgagactgttttggagaatttatgaaaa-agcttattacattgttcataagctattttcagcttattttcataaa 27820234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 189
Target Start/End: Original strand, 38503442 - 38503502
Alignment:
Q  130 gagaacttatgaaaacagctgataacat-gttcatgagctgttttcagcttattttcataa 189  Q
    ||||||||||| |||||||  || |||| |||||| || ||||||||||||||||||||||    
T  38503442 gagaacttatggaaacagcctatgacattgttcataagttgttttcagcttattttcataa 38503502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 4e-16; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 194
Target Start/End: Original strand, 28641732 - 28641791
Alignment:
Q  135 cttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactct 194  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||| ||||    
T  28641732 cttatgaaaacagcttataacatgttcataagctgtttttagcttattttcataagctct 28641791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 31624181 - 31624123
Alignment:
Q  131 agaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||||||||||||||||| || |||||||||| ||||||||||| |||||||||||||    
T  31624181 agaacttatgaaaacagcttatgacatgttcataagctgttttcaacttattttcataa 31624123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 696693 - 696635
Alignment:
Q  131 agaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||||||| ||||||||| || |||||||||| |||||||||||||||||| ||||||    
T  696693 agaacttatcaaaacagcttatgacatgttcataagctgttttcagcttattctcataa 696635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 188
Target Start/End: Original strand, 33832243 - 33832309
Alignment:
Q  122 ctgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcata 188  Q
    ||||||||||||||||||||||||| || || ||||||| || || |||||| ||||||||||||||    
T  33832243 ctgtttaagagaacttatgaaaacaacttatgacatgtttataagttgtttttagcttattttcata 33832309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 1575986 - 1575928
Alignment:
Q  131 agaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    |||||||||||||||| || || |||||||||| ||||||||| | |||||||||||||    
T  1575986 agaacttatgaaaacaacttatgacatgttcataagctgtttttaacttattttcataa 1575928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 32205990 - 32206056
Alignment:
Q  129 agagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||||||||||||| |||||||||||||||| | || |||||| | |||||||||| || |||||    
T  32205990 agagaacttatgaaaatagctgataacatgttcttaagttgtttttatcttattttcacaagctctc 32206056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 9912159 - 9912228
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacat-gttcatgagctgttttcagcttattttcataa 189  Q
    |||||||  |||||||||||||| ||||| || |||| |||||| ||||||||| |||||||||||||||    
T  9912159 actgtttcggagaacttatgaaaccagcttatgacattgttcataagctgttttgagcttattttcataa 9912228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 10616678 - 10616751
Alignment:
Q  117 tgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaa 190  Q
    |||| ||||||  |||||||||| |||||| || || |||||||||| |||||||||||| ||||||| |||||    
T  10616678 tgaatctgtttgggagaacttatcaaaacaccttatgacatgttcataagctgttttcagtttatttttataaa 10616751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 32577957 - 32578022
Alignment:
Q  123 tgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcata 188  Q
    ||||| ||||| |||||||||||| || || |||||| | ||||||||||||||||||||| ||||    
T  32577957 tgtttgagagagcttatgaaaacaacttatgacatgtccttgagctgttttcagcttatttccata 32578022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 696531 - 696483
Alignment:
Q  133 aacttatgaaaacagctgataacatgttcatgagctgttttcagcttat 181  Q
    ||||||||||||||||| || |||||||||| ||||||||| |||||||    
T  696531 aacttatgaaaacagcttatgacatgttcataagctgtttttagcttat 696483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 34404703 - 34404763
Alignment:
Q  130 gagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaa 190  Q
    ||||||||||||||| | || || |||||| ||| ||||||||||||| ||||||||||||    
T  34404703 gagaacttatgaaaatatcttatgacatgtacataagctgttttcagcatattttcataaa 34404763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 34939851 - 34939771
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||||||||||  |||| |||| | |||||||| || |||||| ||| |  |||||||||||||||| |||||||||||    
T  34939851 tgtgaaactgttttggagagcttacggaaacagcttatgacatgtccataaattgttttcagcttatttccataaactctc 34939771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 1575842 - 1575783
Alignment:
Q  131 agaacttatgaaaacagctgat-aacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||||||||||||||||| || ||||||| ||| || |||||||| |||||||||||||    
T  1575842 agaacttatgaaaacagcttatgaacatgtccataaggtgttttcaacttattttcataa 1575783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 2455366 - 2455295
Alignment:
Q  116 gtgaaactgtttaagagaacttatgaaaacagctgataaca-tgttcatgagctgttttcagcttattttca 186  Q
    |||||||| ||| |||||||||||||||||| || || ||| |||| || || |||||||||||||||||||    
T  2455366 gtgaaactatttgagagaacttatgaaaacaacttattacattgtttataagttgttttcagcttattttca 2455295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 189
Target Start/End: Complemental strand, 2735177 - 2735102
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgtt-catgagctgttttcagcttattttcataa 189  Q
    ||||| ||||||| ||| ||||||||||||| ||| || |||| || ||| |||||||||| ||||||||||||||    
T  2735177 tgtgagactgtttgagataacttatgaaaacggcttatgacatttttcataagctgttttcggcttattttcataa 2735102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 194
Target Start/End: Complemental strand, 13908562 - 13908491
Alignment:
Q  123 tgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactct 194  Q
    ||||| ||||||||||  || | |||| || |||||||| | ||||||||||||||||||||||||| ||||    
T  13908562 tgtttgagagaacttaataagaaagcttatgacatgttcgtaagctgttttcagcttattttcataagctct 13908491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 189
Target Start/End: Original strand, 20368158 - 20368217
Alignment:
Q  130 gagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||||||||||||||| || || |||||||||| ||||  ||||| |||||||||||||    
T  20368158 gagaacttatgaaaacaacttatgacatgttcataagctagtttcaacttattttcataa 20368217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 188
Target Start/End: Complemental strand, 821867 - 821833
Alignment:
Q  154 acatgttcatgagctgttttcagcttattttcata 188  Q
    |||||||||| ||||||||||||||||||||||||    
T  821867 acatgttcataagctgttttcagcttattttcata 821833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 769228 - 769175
Alignment:
Q  132 gaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttc 185  Q
    ||||||||||||||| || || |||||||||| ||||||||||| |||| ||||    
T  769228 gaacttatgaaaacatcttatgacatgttcataagctgttttcaacttactttc 769175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 4420711 - 4420670
Alignment:
Q  154 acatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||||||| ||||||||||||||||||| ||||| |||||    
T  4420711 acatgttcataagctgttttcagcttatttccataagctctc 4420670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 22743565 - 22743520
Alignment:
Q  138 atgaaaacagctgataacatgttcatgagctgttttcagcttattt 183  Q
    ||||||||| || || |||||||||| |||||||||||||||||||    
T  22743565 atgaaaacaacttattacatgttcataagctgttttcagcttattt 22743520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 188
Target Start/End: Complemental strand, 33089613 - 33089540
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcata 188  Q
    ||||| ||| ||| ||||||||||||||||||||| |  ||||||| || || ||||||  |||||||||||||    
T  33089613 tgtgagactatttcagagaacttatgaaaacagcttaggacatgtttataagttgttttacgcttattttcata 33089540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 33737677 - 33737608
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttatttt 184  Q
    |||| |||||||| |||||||||||||| ||| || ||  ||||||||| |||||||||| ||| |||||    
T  33737677 tgtgcaactgtttgagagaacttatgaacacaacttatggcatgttcataagctgttttcggctcatttt 33737608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 8364955 - 8365011
Alignment:
Q  131 agaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcat 187  Q
    |||||||||| ||| | ||||| ||||||| |  |||||||||||||||||||||||    
T  8364955 agaacttatggaaataactgatgacatgtttacaagctgttttcagcttattttcat 8365011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 174
Target Start/End: Original strand, 9559384 - 9559444
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataaca-tgttcatgagctgttttc 174  Q
    ||||| |||||||| ||||| |||||||||||||| | |||| ||||||| ||||||||||    
T  9559384 tgtgagactgtttaggagaagttatgaaaacagcttacaacattgttcataagctgttttc 9559444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 223
Target Start/End: Complemental strand, 24670519 - 24670419
Alignment:
Q  123 tgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctcggttattatagtttatgaaaacaactt 222  Q
    ||||| |||||||||||  ||||| || || ||||||  ||  |||||| ||||||||||||||||| |||||  | ||  ||| |||||||||||||||    
T  24670519 tgttttagagaacttatagaaacaacttatgacatgtcaatatgctgttatcagcttattttcataagctctctttgatagtagcttatgaaaacaactt 24670420  T
Q  223 a 223  Q
    |    
T  24670419 a 24670419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 32171352 - 32171420
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||||| ||||| ||||||||||||||| || ||| || ||  |||| |||||||||||||| |||||    
T  32171352 actgtttgagagagcttatgaaaacagcttatgacaagtccagaagctattttcagcttatttccataa 32171420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 12851265 - 12851203
Alignment:
Q  133 aacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||||||||||||||| ||||||||||||| || ||||||| |||||||||||||| |||||    
T  12851265 aacttatgaaaacagcttataacatgttcataagatgttttcggcttattttcataagctctc 12851203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 11569420 - 11569500
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||| ||||||||||||| |||||| |||||||| || |||||| ||| || ||||||||||||||||||| || |||||    
T  11569420 tgtgagactgtttaagagagcttatggaaacagcttatgacatgtacataagttgttttcagcttattttcaaaatctctc 11569500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 195
Target Start/End: Original strand, 42215270 - 42215349
Alignment:
Q  116 gtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||| |||||||  ||||||| |||||||||||| || || ||||||| ||||||||||||||||||| ||||| |||||    
T  42215270 gtgacactgtttgggagaactaatgaaaacagcttatgacttgttcataagctgttttcagcttatttacataagctctc 42215349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 10120858 - 10120789
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacatgt-tcatgagctgttttcagcttattttcataa 189  Q
    ||||||| ||||||||||||||||||||| || |||| | ||||  ||||||||||||||||||||||||    
T  10120858 actgtttgagagaacttatgaaaacagcttatgacatttatcatatgctgttttcagcttattttcataa 10120789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 183
Target Start/End: Complemental strand, 11185333 - 11185260
Alignment:
Q  110 gtacatgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattt 183  Q
    ||||||||||||||||||| |||| ||| || ||||| || ||||||||||||| || |||||||| |||||||    
T  11185333 gtacatgtgaaactgtttatgagatcttttggaaacatcttataacatgttcataagttgttttcaacttattt 11185260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 30389205 - 30389132
Alignment:
Q  116 gtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    |||| ||||||| ||||| | |||||||| |||| || |||||||||| || ||||||||||||||||||||||    
T  30389205 gtgacactgtttgagagagcatatgaaaatagctaatgacatgttcataagttgttttcagcttattttcataa 30389132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 3254316 - 3254264
Alignment:
Q  131 agaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattt 183  Q
    |||||||| |||||||||| || |||||||||| |||||||||||||||||||    
T  3254316 agaacttaagaaaacagcttatgacatgttcataagctgttttcagcttattt 3254264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 13459737 - 13459673
Alignment:
Q  130 gagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactct 194  Q
    |||||||||||||||||||| || |||| ||||| | ||||||||||| ||||||||||| ||||    
T  13459737 gagaacttatgaaaacagcttatgacattttcataaactgttttcagcctattttcataagctct 13459673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 10383975 - 10383913
Alignment:
Q  132 gaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactct 194  Q
    |||||||||||||||||| || |||| ||||| |||||||| |||||||||| ||||| ||||    
T  10383975 gaacttatgaaaacagcttatgacattttcataagctgtttacagcttatttccataagctct 10383913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 2458544 - 2458609
Alignment:
Q  130 gagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||||||||||| |||||| ||  ||||||||| |||||||||||| |||||| ||||| |||||    
T  2458544 gagaacttatgaagacagcttatggcatgttcataagctgttttcagtttatttccataagctctc 2458609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 195
Target Start/End: Complemental strand, 11415266 - 11415181
Alignment:
Q  110 gtacatgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||| ||||| | ||||| |||||  ||||| |||||||| ||||||||| ||| |||| || |||||||||||||| ||||||||    
T  11415266 gtacttgtgagattgttttagagagtttatggaaacagcttataacatgtccataagctattctcagcttattttcacaaactctc 11415181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 20672818 - 20672777
Alignment:
Q  154 acatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||||||| ||||||||||||||||||||||||| |||||    
T  20672818 acatgttcataagctgttttcagcttattttcataagctctc 20672777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 5069798 - 5069730
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||||| ||||| |||||| ||||| || ||||||||||||| ||   ||||||||||||||||||||    
T  5069798 actgtttgagagagcttatggaaacatcttataacatgttcataagtcattttcagcttattttcataa 5069730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 8066748 - 8066812
Alignment:
Q  130 gagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactct 194  Q
    |||| ||||||||||  |||||| |||||| ||| || | |||||||||||||||||||||||||    
T  8066748 gagagcttatgaaaatcgctgatgacatgtccataagtttttttcagcttattttcataaactct 8066812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 10114583 - 10114523
Alignment:
Q  129 agagaacttatgaaaacagctgataacatgt-tcatgagctgttttcagcttattttcata 188  Q
    |||||||||||||||||| || ||||||| | ||||  |||||||||||||||||||||||    
T  10114583 agagaacttatgaaaacaacttataacatttatcatatgctgttttcagcttattttcata 10114523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 14949973 - 14949905
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattt 183  Q
    ||||| |||||||| |||| |||||||||| | || || |||||| ||| |||||||||||||||||||    
T  14949973 tgtgagactgtttaggagagcttatgaaaataacttatgacatgtccataagctgttttcagcttattt 14949905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 32840954 - 32841022
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacat-gttcatgagctgttttcagcttattttcata 188  Q
    |||||||  ||||||||||||||||| || || |||| |||||| || |||||||||||||||||||||    
T  32840954 actgtttgggagaacttatgaaaacaacttatgacattgttcataagttgttttcagcttattttcata 32841022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 186
Target Start/End: Original strand, 2487971 - 2488042
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttca 186  Q
    ||||| |||||||  ||||||||||||||||| || ||||||||||||  | ||||||| ||||||| ||||    
T  2487971 tgtgagactgtttgggagaacttatgaaaacaacttataacatgttcaaaaactgtttttagcttatcttca 2488042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 194
Target Start/End: Original strand, 43368683 - 43368742
Alignment:
Q  135 cttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactct 194  Q
    |||||||||||| || || |||||||||| |||| |||||| ||||||||||| ||||||    
T  43368683 cttatgaaaacaacttatgacatgttcattagctattttcaacttattttcatgaactct 43368742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 9835883 - 9835937
Alignment:
Q  135 cttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    |||||| |||||||| || |||||||||| ||||||||||| ||||||| |||||    
T  9835883 cttatgtaaacagcttatgacatgttcataagctgttttcatcttatttccataa 9835937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 1930128 - 1930071
Alignment:
Q  130 gagaacttatgaaaacagctgataacat-gttcatgagctgttttcagcttattttca 186  Q
    |||||||| ||||||||| | || |||| |||||| ||||||||||||||||||||||    
T  1930128 gagaacttgtgaaaacagtttatgacattgttcataagctgttttcagcttattttca 1930071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 7646298 - 7646233
Alignment:
Q  130 gagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||| |||||||||| ||| || ||||||| || |||| |||||||||||||| ||||| |||||    
T  7646298 gagaatttatgaaaactgcttatgacatgttgatcagctattttcagcttatttccataagctctc 7646233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 224
Target Start/End: Complemental strand, 38561783 - 38561727
Alignment:
Q  165 agctgttttcagcttattttcataaactctcggttattatagtttatgaaaacaacttat 224  Q
    |||||||||| | |||||||||| |||||||   ||| ||||||||||||||||||||||    
T  38561783 agctgttttccgtttattttcatgaactctc---tataatagtttatgaaaacaacttat 38561727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 41442416 - 41442481
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagctta 180  Q
    ||||| ||||||| | ||||||||||||||||  | || ||||||||||  |||||||||||||||    
T  41442416 tgtgagactgtttgacagaacttatgaaaacaatttatgacatgttcatatgctgttttcagctta 41442481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 7111361 - 7111301
Alignment:
Q  129 agagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||| ||||||||||||  |||| |||| ||| | ||||||||| |||||||||||||||    
T  7111361 agagagcttatgaaaacaattgatgacatattcgtaagctgtttttagcttattttcataa 7111301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 30918219 - 30918140
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||| ||||||| ||||| |||||||||||| ||  | |||| ||||| || |||||||||||||||| ||||| |||||    
T  30918219 tgtgagactgtttgagagagcttatgaaaacaacttgtgacat-ttcataagttgttttcagcttatttccataagctctc 30918140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 41606866 - 41606946
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||||| ||||  |||||  || |||||||||| || |||||||||  || |||||||||||||||| ||||| |||||    
T  41606866 tgtgaaacagtttgggagaaactacgaaaacagcttatgacatgttcaaaagttgttttcagcttatttccataagctctc 41606946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 9606 - 9671
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttca 186  Q
    ||||||| |||||||||||||||||| || || |||||||||| ||||||||| ||||||||||||    
T  9606 actgtttgagagaacttatgaaaacaacttattacatgttcataagctgtttttagcttattttca 9671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 45128270 - 45128347
Alignment:
Q  112 acatgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    |||||||| | ||||| ||||| |||||| ||||| |||||| ||||| ||||||||||||||||||||||| |||||    
T  45128270 acatgtgatattgtttgagagagcttatggaaacaactgatatcatgtccatgagctgttttcagcttatttccataa 45128347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 1137819 - 1137739
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||| |||||||| ||||||||||||||||| || || |||||||||| || ||||||||| |||||| ||||| |||||    
T  1137819 tgtgacactgtttaggagaacttatgaaaacatcttatgacatgttcataagttgttttcagtttatttccataagctctc 1137739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 25571365 - 25571298
Alignment:
Q  117 tgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttatttt 184  Q
    |||||||||||| ||||||||||| |||||| | || | |||||||| ||||||||||||||||||||    
T  25571365 tgaaactgtttaggagaacttatggaaacagtttatgatatgttcataagctgttttcagcttatttt 25571298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 195
Target Start/End: Original strand, 22236071 - 22236148
Alignment:
Q  118 gaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||||||||  |||| | ||| |||||||||  | ||||||||||||||||||||| |||||||||||||| |||||    
T  22236071 gaaactgtttgggagagcctattaaaacagcttgtgacatgttcatgagctgttttctgcttattttcataagctctc 22236148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 49219242 - 49219140
Alignment:
Q  119 aaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctcggttattatagtttatgaaaaca 218  Q
    |||||||||| |||| ||||||||||||  | ||| ||| | ||| || |||||||||||||||| ||||| ||||   |||  ||||||||||||||||    
T  49219242 aaactgtttaggagaccttatgaaaacaattaatagcatctccataagttgttttcagcttatttccataatctct---ttaagatagtttatgaaaaca 49219146  T
Q  219 acttat 224  Q
    ||||||    
T  49219145 acttat 49219140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 195
Target Start/End: Original strand, 50742805 - 50742879
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||||| ||||||||||||||||||| | || ||||||||||   ||||||||| || |||||||||| |||||    
T  50742805 actgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttcaactcattttcataagctctc 50742879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 224
Target Start/End: Complemental strand, 28615427 - 28615335
Alignment:
Q  130 gagaacttatgaaaacagctgataacatgttcatgagctg-ttttcagcttattttcataaactctcggttattatagtttatgaaaacaacttat 224  Q
    |||||||||||||||||||| || |||| ||||| || || ||||  |||||||||||||| ||||   | ||||||| |||||||||||||||||    
T  28615427 gagaacttatgaaaacagctaatgacattttcataagttgttttttggcttattttcataagctct---tcattatagcttatgaaaacaacttat 28615335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 18011963 - 18011899
Alignment:
Q  130 gagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactct 194  Q
    |||| ||||||||||||||| |||| ||||  || ||| ||||| ||||||||||||||||||||    
T  18011963 gagagcttatgaaaacagcttataatatgtatataagccgtttttagcttattttcataaactct 18011899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 191
Target Start/End: Original strand, 48719362 - 48719430
Alignment:
Q  123 tgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaac 191  Q
    ||||| || |||||||||||||  | | || |||||||| | |||||||||||||||||||||||||||    
T  48719362 tgtttgagggaacttatgaaaatggtttatgacatgttcgtaagctgttttcagcttattttcataaac 48719430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 188
Target Start/End: Complemental strand, 2996674 - 2996607
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcata 188  Q
    ||||||| ||||| |||||||||||| || || |||||| ||| |||| |||||| ||||||||||||    
T  2996674 actgtttgagagagcttatgaaaacaacttatgacatgtccataagcttttttcaacttattttcata 2996607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 194
Target Start/End: Original strand, 37575907 - 37575978
Alignment:
Q  123 tgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactct 194  Q
    ||||| |||||||||||||||| | || |||||||  |||| || ||||||||||| |||| ||||||||||    
T  37575907 tgtttgagagaacttatgaaaataacttataacatactcataagttgttttcagctcatttccataaactct 37575978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 189
Target Start/End: Original strand, 3176067 - 3176141
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    |||||||||||||| |||| |||||||||||| || ||  |||||  || || |||||||||||||||| |||||    
T  3176067 tgtgaaactgtttaggagagcttatgaaaacatcttatgtcatgtctataagttgttttcagcttatttccataa 3176141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 20936210 - 20936272
Alignment:
Q  133 aacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||||||||||| || || | |||||||| ||||||||||| ||||||| ||||| |||||    
T  20936210 aacttatgaaaacaacttatgatatgttcataagctgttttcaccttatttccataatctctc 20936272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 224
Target Start/End: Complemental strand, 24929579 - 24929494
Alignment:
Q  136 ttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctcggttattatagtttatgaaaacaacttat 224  Q
    ||||| |||||||| ||  ||||||||| |  |||||||||||||||| ||||| |||||   || || ||||||||||||||||||||    
T  24929579 ttatggaaacagcttatggcatgttcataaattgttttcagcttatttccataagctctc---tagtagagtttatgaaaacaacttat 24929494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 30066751 - 30066809
Alignment:
Q  137 tatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||||||||||| |||| |||||||| | ||||||||||||| |||| |||| |||||    
T  30066751 tatgaaaacagcttataatatgttcataatctgttttcagcttgtttttataagctctc 30066809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 194
Target Start/End: Original strand, 6978975 - 6979004
Alignment:
Q  165 agctgttttcagcttattttcataaactct 194  Q
    ||||||||||||||||||||||||||||||    
T  6978975 agctgttttcagcttattttcataaactct 6979004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 7694012 - 7694053
Alignment:
Q  154 acatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||||||| || |||||||||||||||| |||||||||||    
T  7694012 acatgttcataagttgttttcagcttatttccataaactctc 7694053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 28300276 - 28300341
Alignment:
Q  129 agagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactct 194  Q
    |||||| |||||||||||||  || |||||||| | || |||||||| ||||||||||||| ||||    
T  28300276 agagaatttatgaaaacagcctatgacatgttcttaagttgttttcaacttattttcataagctct 28300341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 29467626 - 29467667
Alignment:
Q  154 acatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||| ||| ||||||||||||||||||| |||||||||||    
T  29467626 acatgtccataagctgttttcagcttatttccataaactctc 29467667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 180
Target Start/End: Original strand, 37863921 - 37863982
Alignment:
Q  119 aaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagctta 180  Q
    ||||| ||| ||||||||||||||||||||| || ||| |||||| || |||||||| ||||    
T  37863921 aaactatttgagagaacttatgaaaacagcttatgacacgttcataagttgttttcacctta 37863982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 37864333 - 37864386
Alignment:
Q  133 aacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttca 186  Q
    ||||||| ||||||||| || | |||||||| ||||||||||| ||||||||||    
T  37864333 aacttataaaaacagcttattaaatgttcataagctgttttcaccttattttca 37864386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 55084483 - 55084524
Alignment:
Q  154 acatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||||||| ||||| ||||||||||||||||||| |||||    
T  55084483 acatgttcataagctggtttcagcttattttcataagctctc 55084524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 159
Target Start/End: Original strand, 25434375 - 25434419
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgt 159  Q
    |||||||||||||| |||| |||| |||||||||| |||||||||    
T  25434375 tgtgaaactgtttaggagagcttaggaaaacagcttataacatgt 25434419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 42461352 - 42461284
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    |||||||  ||||||||||||||| |||  || || ||||||| || || |||||||||||||||||||    
T  42461352 actgtttgggagaacttatgaaaatagcctatgacgtgttcataagttgatttcagcttattttcataa 42461284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 44249368 - 44249312
Alignment:
Q  139 tgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||||||||| || ||||||| || || | | ||||||||||||||||||||||||    
T  44249368 tgaaaacagcttatgacatgttgataagttttcttcagcttattttcataaactctc 44249312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 49939929 - 49939981
Alignment:
Q  131 agaacttatgaaaacagctgataacat-gttcatgagctgttttcagcttatt 182  Q
    |||||||||||||| |||| || |||| |||||| ||||||||||||||||||    
T  49939929 agaacttatgaaaagagcttatgacattgttcataagctgttttcagcttatt 49939981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 52746825 - 52746877
Alignment:
Q  137 tatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    |||| |||||||| |  |||||||||| |||||||||||||| ||||||||||    
T  52746825 tatggaaacagcttaagacatgttcataagctgttttcagctgattttcataa 52746877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 35378994 - 35379059
Alignment:
Q  130 gagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||| |||||||||||||||||| || ||||||| || |||||||||||||||||||||| |||||    
T  35378994 gagagcttatgaaaacagctgatgacttgttcataagttgttttcagcttattttcataagctctc 35379059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 191
Target Start/End: Complemental strand, 787439 - 787363
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaac 191  Q
    ||||| |||||||  |||||||||||||||||||| || |||||| ||| ||||||||||||||||| | |||||||    
T  787439 tgtgacactgtttgtgagaacttatgaaaacagcttatgacatgtccataagctgttttcagcttatctccataaac 787363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 195
Target Start/End: Complemental strand, 1647327 - 1647263
Alignment:
Q  131 agaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||||||||||||||||| || ||||| |||| ||||||||||||||||||| ||||| |||||    
T  1647327 agaacttatgaaaacagcttatgacatgctcataagctgttttcagcttatttccataagctctc 1647263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 189
Target Start/End: Original strand, 35378510 - 35378569
Alignment:
Q  130 gagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||||||||||||||||||||| || ||||||| || | ||||||||||||||||||||    
T  35378510 gagaacttatgaaaacagctgatgacttgttcataagttattttcagcttattttcataa 35378569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 16451211 - 16451154
Alignment:
Q  130 gagaacttatgaaaacagctgataacat-gttcatgagctgttttcagcttattttca 186  Q
    ||||||||||||||||| || || |||| |||||||||||||||||||||||||||||    
T  16451211 gagaacttatgaaaacaacttatgacattgttcatgagctgttttcagcttattttca 16451154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 195
Target Start/End: Original strand, 27237857 - 27237936
Alignment:
Q  116 gtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||||||||||   |||||||||  |||||||| || |||||| ||| ||||||||| ||||||||| |||||||||||    
T  27237857 gtgaaactgtttggtagaacttatagaaacagcttatgacatgtacataagctgtttttagcttatttccataaactctc 27237936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 195
Target Start/End: Original strand, 28677628 - 28677702
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||||  |||||||||||||||||||| || |||| ||||| || ||||||| |||||||| ||||| |||||    
T  28677628 actgtttgggagaacttatgaaaacagcttatgacattttcataagttgttttcggcttatttccataagctctc 28677702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 33256832 - 33256774
Alignment:
Q  130 gagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcata 188  Q
    |||| ||||||||||||||| || |||||||||| | ||||| ||||||||||||||||    
T  33256832 gagagcttatgaaaacagcttatgacatgttcataaactgttctcagcttattttcata 33256774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 195
Target Start/End: Original strand, 43529827 - 43529901
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||||  ||||| |||||||||||||| ||  ||||||||| |||| ||||||| |||||||||||| |||||    
T  43529827 actgtttgggagaatttatgaaaacagcttatgccatgttcataagctattttcagtttattttcataagctctc 43529901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 1494415 - 1494480
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttca 186  Q
    ||||||| ||||| ||||||||||||||| || |||||| ||| | ||||||| ||||||||||||    
T  1494415 actgtttgagagagcttatgaaaacagcttatgacatgtccataaactgtttttagcttattttca 1494480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 5902528 - 5902581
Alignment:
Q  131 agaacttatgaaaacagctgataacatgttcatgagctgttttcagcttatttt 184  Q
    ||||||||||||||||||| || |||||||||| | ||||||||||||| ||||    
T  5902528 agaacttatgaaaacagcttatgacatgttcataaactgttttcagcttgtttt 5902581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 8820261 - 8820334
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactct 194  Q
    |||| |||||||| |||||| ||||||||  | |||||||||  ||||||||||||||||||| ||||| ||||    
T  8820261 actgcttaagagaccttatggaaacagcttctgacatgttcacaagctgttttcagcttatttccataagctct 8820334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 3067357 - 3067421
Alignment:
Q  130 gagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactct 194  Q
    |||| ||||||||||||||| |||| ||||  || ||| ||||| ||||||||||||||||||||    
T  3067357 gagagcttatgaaaacagcttataatatgtatataagccgtttttagcttattttcataaactct 3067421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 195
Target Start/End: Complemental strand, 35555230 - 35555154
Alignment:
Q  119 aaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||||||| ||||| ||||||||||||| | || ||||| |||| | || |||||||||||||| ||| |||||||    
T  35555230 aaactgtttgagagagcttatgaaaacagattattacatgatcataaactattttcagcttatttccatcaactctc 35555154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 41041985 - 41042065
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||| ||||||| |||||| ||||  ||||| || || |||||| ||| ||||||||||| ||||||| |||||||||||    
T  41041985 tgtgagactgtttcagagaatttatagaaacaacttattacatgtccatcagctgttttcaacttatttccataaactctc 41042065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 190
Target Start/End: Original strand, 2964780 - 2964847
Alignment:
Q  123 tgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaa 190  Q
    ||||| || |||||||||||||||||| || |||||||  | |||| |||||||||||||| ||||||    
T  2964780 tgtttgagtgaacttatgaaaacagcttatgacatgttggttagcttttttcagcttatttccataaa 2964847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 4350789 - 4350726
Alignment:
Q  123 tgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttca 186  Q
    ||||| ||||||||||||||||||||| || |||||||||| | ||| ||| || |||||||||    
T  4350789 tgtttgagagaacttatgaaaacagcttatgacatgttcataaactgattttaggttattttca 4350726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 189
Target Start/End: Complemental strand, 31096393 - 31096334
Alignment:
Q  130 gagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    |||| ||||||||||||| | ||||||||| ||| ||||||||| | |||||||||||||    
T  31096393 gagagcttatgaaaacagttaataacatgtccataagctgttttaaacttattttcataa 31096334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 32614923 - 32614990
Alignment:
Q  127 taagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactct 194  Q
    ||||||||||||| |||||| || || ||||||||||  | ||||||||| ||||| |||||||||||    
T  32614923 taagagaacttataaaaacaacttatgacatgttcatatgttgttttcagattattctcataaactct 32614990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 195
Target Start/End: Complemental strand, 40158808 - 40158745
Alignment:
Q  132 gaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||||||||||||||| || ||||||| || || ||||||||||||| || ||||| |||||    
T  40158808 gaacttatgaaaacagcttatgacatgtttataagttgttttcagcttaattacataagctctc 40158745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 680589 - 680539
Alignment:
Q  136 ttatgaaaacagctgataacatgttcatgagctgttttcagcttattttca 186  Q
    |||||||||||||| || ||||||| || | ||||||||||||||||||||    
T  680589 ttatgaaaacagcttatgacatgtttataaactgttttcagcttattttca 680539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 189
Target Start/End: Original strand, 32364694 - 32364768
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||||| |||||  |||| ||||| ||| ||||| || || ||| |||||| ||||||||||||||||||||||    
T  32364694 tgtgaaattgtttgggagagcttataaaaccagcttatgacgtgtccatgagttgttttcagcttattttcataa 32364768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 32837435 - 32837377
Alignment:
Q  110 gtacatgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagct 168  Q
    |||| ||||| |||||||  |||||||||||||||||||| ||||||||| ||| ||||    
T  32837435 gtacttgtgagactgtttgggagaacttatgaaaacagcttataacatgtccattagct 32837377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 33941998 - 33941936
Alignment:
Q  133 aacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||||||||||| || || ||| |||||| ||||| ||||| |||||| ||||||||||||    
T  33941998 aacttatgaaaacaacttatgacaagttcataagctgctttcaacttattatcataaactctc 33941936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 195
Target Start/End: Complemental strand, 41817269 - 41817195
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||||| ||||| ||||||||||| || || ||||||| || |  |||||||||||||||| ||||| |||||    
T  41817269 actgtttaggagaatttatgaaaacatcttatgacatgttgataatttgttttcagcttatttccataagctctc 41817195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 189
Target Start/End: Original strand, 43717107 - 43717173
Alignment:
Q  123 tgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||| ||| ||||||||||||||||| |  |||| |||||  | ||||||||||||||||||||||    
T  43717107 tgtttcagacaacttatgaaaacagcttaggacattttcataggttgttttcagcttattttcataa 43717173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 44606089 - 44606147
Alignment:
Q  131 agaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    |||||||||||||||| || || |||||| ||| || ||||||||||| ||||||||||    
T  44606089 agaacttatgaaaacaacttatgacatgtccataagttgttttcagctgattttcataa 44606147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 7782851 - 7782782
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttatttt 184  Q
    ||||| |||||||||||||| |||| |||||| || ||||||| ||||| || ||| |||||||| ||||    
T  7782851 tgtgatactgtttaagagaatttataaaaacaacttataacattttcataagttgtgttcagcttctttt 7782782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 9595344 - 9595291
Alignment:
Q  136 ttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||||||||| || || |||||| ||||| || ||||||||||||||||||||    
T  9595344 ttatgaaaacatcttatgacatgtccatgaactattttcagcttattttcataa 9595291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 12313151 - 12313216
Alignment:
Q  130 gagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||| |||||||||||||| ||  ||||||||| || || ||||| ||||||||||||| |||||    
T  12313151 gagaatttatgaaaacagcttatgccatgttcataagttgatttcaccttattttcataagctctc 12313216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 194
Target Start/End: Original strand, 17775479 - 17775508
Alignment:
Q  165 agctgttttcagcttattttcataaactct 194  Q
    ||||||||||||||||||||||||||||||    
T  17775479 agctgttttcagcttattttcataaactct 17775508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 179
Target Start/End: Original strand, 18962015 - 18962064
Alignment:
Q  130 gagaacttatgaaaacagctgataacatgttcatgagctgttttcagctt 179  Q
    |||| ||||||||||||||  || ||||||||||| ||||||||||||||    
T  18962015 gagagcttatgaaaacagcatatgacatgttcatgtgctgttttcagctt 18962064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 19333327 - 19333368
Alignment:
Q  154 acatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||||||| ||||||| ||||||||||||||||| |||||    
T  19333327 acatgttcataagctgttctcagcttattttcataagctctc 19333368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 22681169 - 22681222
Alignment:
Q  136 ttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||||||||| |  ||||||||||||| ||||||||| ||||||||| |||||    
T  22681169 ttatgaaaacaacaaataacatgttcataagctgtttttagcttatttccataa 22681222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 24097896 - 24097835
Alignment:
Q  135 cttatgaaaacagctgataacatgttcatgagctg-ttttcagcttattttcataaactctc 195  Q
    |||||||||| | || | ||||||| ||||||||| |||||||||||||||||||| |||||    
T  24097896 cttatgaaaataacttaaaacatgtccatgagctggttttcagcttattttcataagctctc 24097835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 187
Target Start/End: Complemental strand, 36534876 - 36534803
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataaca-tgttcatgagctgttttcagcttattttcat 187  Q
    ||||| |||||||  || ||||||||||||||||| |||| | ||||||| | || ||||||||||||||||||    
T  36534876 tgtgagactgtttgggataacttatgaaaacagcttataaaattgttcataatctattttcagcttattttcat 36534803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 2091014 - 2091066
Alignment:
Q  132 gaacttatgaaaacagctgataacatgttcatgagctgttttcagcttatttt 184  Q
    ||||||||||| |||||| || | ||| |||| ||||||||||||||||||||    
T  2091014 gaacttatgaatacagcttatgatatggtcataagctgttttcagcttatttt 2091066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 189
Target Start/End: Complemental strand, 4607018 - 4606958
Alignment:
Q  130 gagaacttatgaaaacagctgataacat-gttcatgagctgttttcagcttattttcataa 189  Q
    |||||||| |||||||| || || |||| |||||||||||| ||| |||||||||||||||    
T  4607018 gagaacttgtgaaaacaacttatgacattgttcatgagctgcttttagcttattttcataa 4606958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 13220534 - 13220466
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||||| ||||||||||| |||||| || || || ||||||| ||||||||| | ||||||| |||||    
T  13220534 actgtttgagagaacttataaaaacaacttatgacttgttcataagctgttttaaacttatttgcataa 13220466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 195
Target Start/End: Complemental strand, 33192293 - 33192229
Alignment:
Q  131 agaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||||||||||||||| | || |||| | ||| ||||||||||||||||| || |||| |||||    
T  33192293 agaacttatgaaaacagtttatgacatatccataagctgttttcagcttatatttataagctctc 33192229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 33942218 - 33942151
Alignment:
Q  154 acatgttcatgagctgttttcagcttattttcataaactctcggttattatagtttatgaaaacaacttat 224  Q
    |||||||||| |||||||||||||| |||||||| | |||||   ||| || | |||||||||||||||||    
T  33942218 acatgttcataagctgttttcagctaattttcattagctctc---tatgatggcttatgaaaacaacttat 33942151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 195
Target Start/End: Complemental strand, 42907452 - 42907388
Alignment:
Q  131 agaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||| || |||| |||||  |||||||||||| ||||| ||||||| ||||||||||| |||||    
T  42907452 agaacataagaaaccagcttctaacatgttcataagctgctttcagcctattttcataagctctc 42907388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 189
Target Start/End: Complemental strand, 43511150 - 43511118
Alignment:
Q  157 tgttcatgagctgttttcagcttattttcataa 189  Q
    ||||||| |||||||||||||||||||||||||    
T  43511150 tgttcataagctgttttcagcttattttcataa 43511118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 189
Target Start/End: Complemental strand, 43570506 - 43570447
Alignment:
Q  130 gagaacttatgaaaacagctgataaca-tgttcatgagctgttttcagcttattttcataa 189  Q
    |||||||||||||||||||| || ||| ||||||| |||| |||| |||||||||||||||    
T  43570506 gagaacttatgaaaacagcttatgacattgttcataagct-tttttagcttattttcataa 43570447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 44438826 - 44438870
Alignment:
Q  139 tgaaaacagctgataacatgttcatgagctgttttcagcttattt 183  Q
    ||||||||||| || |||||||||| | |||||||||||||||||    
T  44438826 tgaaaacagcttatgacatgttcataacctgttttcagcttattt 44438870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 43219623 - 43219681
Alignment:
Q  131 agaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||||||| ||||||||| || |||||||||| |||||||||||||||||| ||||||    
T  43219623 agaacttatcaaaacagcttatgacatgttcataagctgttttcagcttattctcataa 43219681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 11048118 - 11048060
Alignment:
Q  131 agaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||||||| |||||| || || |||||||||| |||||||||||||||||| ||||||    
T  11048118 agaacttatcaaaacaacttatgacatgttcataagctgttttcagcttattctcataa 11048060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 15740390 - 15740448
Alignment:
Q  131 agaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    |||||||||||||||| || || |||||||||| ||||||||| | |||||||||||||    
T  15740390 agaacttatgaaaacaacttatgacatgttcataagctgtttttaacttattttcataa 15740448  T

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Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 19719105 - 19719047
Alignment:
Q  123 tgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttat 181  Q
    |||| ||||||||||||||||||| || || |||||||||| | |||||||||||||||    
T  19719105 tgttcaagagaacttatgaaaacaacttatgacatgttcataaactgttttcagcttat 19719047  T

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Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 33678873 - 33678816
Alignment:
Q  130 gagaacttatgaaaacagctgataaca-tgttcatgagctgttttcagcttattttca 186  Q
    ||||||||||||||||| || |||||| |||||||||| |||||||| ||||||||||    
T  33678873 gagaacttatgaaaacaacttataacattgttcatgagatgttttcaacttattttca 33678816  T

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Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 6552294 - 6552334
Alignment:
Q  154 acatgttcatgagctgttttcagcttattttcataaactct 194  Q
    |||| ||||| ||||||||||||||||||||||||||||||    
T  6552294 acatattcataagctgttttcagcttattttcataaactct 6552334  T

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Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 25670549 - 25670629
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    ||||| ||||||| ||| |||||||||||||| || || ||||||| || |  ||||||||||||||||||| || |||||    
T  25670549 tgtgagactgtttgagaaaacttatgaaaacaacttatgacatgttaataaattgttttcagcttattttcacaagctctc 25670629  T

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Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 36598327 - 36598387
Alignment:
Q  123 tgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattt 183  Q
    ||||| ||||| |||||| ||||| || || |||||||||| |||||||||||||||||||    
T  36598327 tgtttgagagagcttatggaaacatcttatgacatgttcataagctgttttcagcttattt 36598387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 43219785 - 43219833
Alignment:
Q  133 aacttatgaaaacagctgataacatgttcatgagctgttttcagcttat 181  Q
    ||||||||||||||||| || |||||||||| ||||||||| |||||||    
T  43219785 aacttatgaaaacagcttatgacatgttcataagctgtttttagcttat 43219833  T

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Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 15740534 - 15740593
Alignment:
Q  131 agaacttatgaaaacagctgat-aacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||||||||||||||||| || ||||||| ||| || |||||||| |||||||||||||    
T  15740534 agaacttatgaaaacagcttatgaacatgtccataaggtgttttcaacttattttcataa 15740593  T

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Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 188
Target Start/End: Complemental strand, 30535664 - 30535597
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcata 188  Q
    |||||||  ||||||||||||||||| || || | |||||| | |||||||||||| |||||||||||    
T  30535664 actgttttggagaacttatgaaaacaacttatgatatgttcgtaagctgttttcaggttattttcata 30535597  T

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Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 39968013 - 39967955
Alignment:
Q  130 gagaacttatgaaaacagctgataacat-gttcatgagctgttttcagcttattttcat 187  Q
    |||||||||||||||||||| ||  ||| |||||| ||||||||||| |||||||||||    
T  39968013 gagaacttatgaaaacagcttatggcattgttcataagctgttttcaacttattttcat 39967955  T

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Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 195
Target Start/End: Complemental strand, 46082137 - 46082063
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||| | |||| |||||||||||| || || |||||  ||| || |||||||||||||||||||||| |||||    
T  46082137 actgttaatgagagcttatgaaaacaacttatgacatgaccataagttgttttcagcttattttcataagctctc 46082063  T

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Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 186
Target Start/End: Original strand, 13960700 - 13960757
Alignment:
Q  129 agagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttca 186  Q
    ||||| ||||||||||||||| |||||| || ||| |||| | |||||||||||||||    
T  13960700 agagagcttatgaaaacagcttataacaagtccataagctatgttcagcttattttca 13960757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 187
Target Start/End: Complemental strand, 20526554 - 20526481
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataaca-tgttcatgagctgttttcagcttattttcat 187  Q
    ||||| ||||||| ||||||||||||||||||| | || ||| | ||| | ||||||||| |||||||||||||    
T  20526554 tgtgagactgtttgagagaacttatgaaaacagtttatcacatttttcgtaagctgtttttagcttattttcat 20526481  T

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Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 192
Target Start/End: Complemental strand, 33894734 - 33894657
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaact 192  Q
    ||||| |||||||  |||| ||||||||||||||  || |||||| ||| || ||||||||||||||||  |||||||    
T  33894734 tgtgagactgtttgtgagagcttatgaaaacagcatatgacatgtccataagttgttttcagcttatttcaataaact 33894657  T

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Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 38010800 - 38010747
Alignment:
Q  136 ttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||||||||| |  ||||||||||||| ||||||||| ||||||||| |||||    
T  38010800 ttatgaaaacaacaaataacatgttcataagctgtttttagcttatttccataa 38010747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 195
Target Start/End: Original strand, 43250681 - 43250742
Alignment:
Q  134 acttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||||||||||||| || |||||||| | || ||||||||| |||| ||||||| |||||    
T  43250681 acttatgaaaacagcttatgacatgttcgtaagttgttttcagtttatattcataagctctc 43250742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 5276334 - 5276266
Alignment:
Q  119 aaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcat 187  Q
    ||||||||| ||||| |||||| ||||| || || |||| ||||| || |||||||| |||||||||||    
T  5276334 aaactgtttgagagagcttatgcaaacatcttatgacatcttcattagttgttttcaccttattttcat 5276266  T

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Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 27496409 - 27496449
Alignment:
Q  154 acatgttcatgagctgttttcagcttattttcataaactct 194  Q
    |||||| ||| ||||||||||||||||||| ||||||||||    
T  27496409 acatgtccataagctgttttcagcttatttccataaactct 27496449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 27503067 - 27503107
Alignment:
Q  154 acatgttcatgagctgttttcagcttattttcataaactct 194  Q
    |||||| ||| ||||||||||||||||||| ||||||||||    
T  27503067 acatgtccataagctgttttcagcttatttccataaactct 27503107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 224
Target Start/End: Original strand, 27863687 - 27863794
Alignment:
Q  115 tgtgaaactgtttaagagaacttatgaaaacagc-tgataacatgttcatgagctgttttcagcttattttcataaactctcggttattatagtttatga 213  Q
    ||||| ||| ||| |||||||||||||||||||| ||| || || ||||  | || |||||||||||| |||||||  ||||   || |||||||||| |    
T  27863687 tgtgagactatttgagagaacttatgaaaacagcttgagaaaattttcaaaaacttttttcagcttatgttcataagttctc---taatatagtttatta 27863783  T
Q  214 aaacaacttat 224  Q
    |||||||||||    
T  27863784 aaacaacttat 27863794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 187
Target Start/End: Complemental strand, 39907870 - 39907838
Alignment:
Q  155 catgttcatgagctgttttcagcttattttcat 187  Q
    ||||||||| |||||||||||||||||||||||    
T  39907870 catgttcattagctgttttcagcttattttcat 39907838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 195
Target Start/End: Original strand, 44615071 - 44615147
Alignment:
Q  119 aaactgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 195  Q
    |||||||| | |||| |||||||||||| || || |||||| ||  |||||||||||  |||||| |||||||||||    
T  44615071 aaactgttcaggagagcttatgaaaacaacttatgacatgtccacaagctgttttcacgttatttccataaactctc 44615147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 44808259 - 44808191
Alignment:
Q  121 actgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataa 189  Q
    ||||||| | ||| |||||||||| | || || |||||| ||| | |||||||||||||||||||||||    
T  44808259 actgtttgatagaccttatgaaaataacttatgacatgtccataacctgttttcagcttattttcataa 44808191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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