View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8517_high_8 (Length: 265)
Name: NF8517_high_8
Description: NF8517
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8517_high_8 |
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Alignment Details
Target: chr5 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 29 - 255
Target Start/End: Original strand, 19251846 - 19252072
Alignment:
| Q |
29 |
tgataagtaaccgacaagttaccaatgatcccatttgacatttagccataaatagatacatatacttgtcctttggtgggtccatattaatgaaattcat |
128 |
Q |
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| T |
19251846 |
tgataagtaaccgacaagttaccaatgaacccatttgacatttagccataaatagatacatatactggtcctttggtgggtccatattaatgaaattcat |
19251945 |
T |
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| Q |
129 |
ggggtcctcctgacccctaactccaaccatattctcttcaaatctgccccaaaaaggtccatttccatgcttgttttcagattcagctcttccctttttc |
228 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19251946 |
ggggtcctcctgacccctaactccaaccatattctcttcaaatttgccccaaaaaggtccatttccatgcttgttttcagattcagctcttccctttttc |
19252045 |
T |
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| Q |
229 |
aacattctcatacaacacaaatctatg |
255 |
Q |
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|||||||||||||||||||| |||||| |
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| T |
19252046 |
aacattctcatacaacacaactctatg |
19252072 |
T |
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