View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8518A_high_3 (Length: 631)
Name: NF8518A_high_3
Description: NF8518A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8518A_high_3 |
 |  |
|
| [»] scaffold1195 (1 HSPs) |
 |  |  |
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Alignment Details
Target: chr7 (Bit Score: 266; Significance: 1e-148; HSPs: 18)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 8 - 304
Target Start/End: Original strand, 15479708 - 15480005
Alignment:
| Q |
8 |
ttggtgtttcagtgtttctttgaacctttgacaatactctccttgtgctgacattcttgaacaacaatgatctttcaataaagttcctgttggagacttg |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
15479708 |
ttggtgtttcagtgtttctttgaacctttgacaatactctcctggtgctgacattcttgaacaacaatgatctttcagtaaagttcctgttggagacttg |
15479807 |
T |
 |
| Q |
108 |
aaatggtttgtgttgtgggttggtagtggaagaggagggcttagtcttggtcattgagtgattggtatggtggatctcttgattgcaaagtgtatatggg |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
15479808 |
aaatggtttgtgttgtgggttggtagtggaagaggagggcttagtcttggtcattgagtgattggtatggtggatctcttgattgcaacgtgtatatggg |
15479907 |
T |
 |
| Q |
208 |
tgggtgatcaattaacagttacttttcttcttg-agatgagaaatgaaactgttgaagtagaaagtgtttagaagtgtgtttccaagagtggttttat |
304 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |
|
|
| T |
15479908 |
tgggtgatcaattaacagttacttttcttcttgaagataagaaatgaaactgttgaagtacaaagtgtttagaagtgtgtttccaagggtggttttat |
15480005 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 8 - 321
Target Start/End: Complemental strand, 15539832 - 15539514
Alignment:
| Q |
8 |
ttggtgtttcagtgtttctttgaacctttgacaatactctccttgtgctgacattcttgaacaacaatgatctttcaataaagttcctgttggagacttg |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
15539832 |
ttggtgtttcagtgtttctttgaacctttgacaatactctccttgtgctgacattcttgaacaacaatgatctttcagtaaagttcctgttggagacttg |
15539733 |
T |
 |
| Q |
108 |
aaatggtttgtgttgtgggttggtagtggaagaggagggcttagtcttggtcattgagtgattggtatggtggatctcttgattgcaaagtgtatatggg |
207 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||| | |||||||||||| |||||||||| |
|
|
| T |
15539732 |
aaatggtttgtgttgtgggttcgtagtggaagaagagggcttagtcttggtcatttagtgattggtatggtgggtttcttgattgcaaggtgtatatggc |
15539633 |
T |
 |
| Q |
208 |
tgggtgatcaatt---aacagtta-cttttcttcttg-agatgagaaatgaaactgttgaagtagaaagtgtttagaagtgtgtttccaagagtggtttt |
302 |
Q |
| |
|
|||||||| |||| |||||||| |||| ||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
15539632 |
tgggtgattaattagcaacagttatctttccttcttgaagataagaaatgaaactgttgaattagaaagtgtttagaagtgtgtttccaagggtggtttt |
15539533 |
T |
 |
| Q |
303 |
atttatagacaccagttat |
321 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
15539532 |
atttatagacaccagttat |
15539514 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 13 - 321
Target Start/End: Complemental strand, 15429158 - 15428845
Alignment:
| Q |
13 |
gtttcagtgtttctttgaacctttgacaatactctccttgtgctgacattcttgaacaacaatgatctttcaataaagttcctgttggagacttgaaatg |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
15429158 |
gtttcagtgtttctttgaacctttgacaatactctccttgtgctgacattcttgaacaacaatgctctttcagtaaagttcctgttggagacttgaaatg |
15429059 |
T |
 |
| Q |
113 |
gtttgtgttgtgggttggtagtggaagaggagggcttagtcttggtcattgagtgattggtatggtggatctcttgattgcaaagtgtatatgggtgggt |
212 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||| |||| | | |||||||||||||||||||||||| || | |
|
|
| T |
15429058 |
gtttgtgttgtgggttcgtagtggaagaagagggcttagtcttggtcatttagtgattggtttggtcggtttcttgattgcaaagtgtatatgggaggct |
15428959 |
T |
 |
| Q |
213 |
gatcaatt---aacagtt-acttttcttcttg-agatgagaaatgaaactgttgaagtagaaagtgtttagaagtgtgtttccaagagtggttttattta |
307 |
Q |
| |
|
||| |||| ||||||| ||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
15428958 |
gattaattagaaacagttaactttccttcttgaagataagaaatgaaactgttgaagtagaaagtgtttagaagtgtgtttccaagggtggttttattta |
15428859 |
T |
 |
| Q |
308 |
tagacaccagttat |
321 |
Q |
| |
|
|||| ||||||||| |
|
|
| T |
15428858 |
tagataccagttat |
15428845 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 13 - 321
Target Start/End: Complemental strand, 15487553 - 15487240
Alignment:
| Q |
13 |
gtttcagtgtttctttgaacctttgacaatactctccttgtgctgacattcttgaacaacaatgatctttcaataaagttcctgttggagacttgaaatg |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
15487553 |
gtttcagtgtttctttgaacctttgacaatactctccttgtgctgacattcttgaacaacaatgctctttcagtaaagttcctgttggagacttgaaatg |
15487454 |
T |
 |
| Q |
113 |
gtttgtgttgtgggttggtagtggaagaggagggcttagtcttggtcattgagtgattggtatggtggatctcttgattgcaaagtgtatatgggtgggt |
212 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||| |||| | | |||||||||||||||||||||||| || | |
|
|
| T |
15487453 |
gtttgtgttgtgggttcgtagtggaagaagagggcttagtcttggtcatttagtgattggtttggtcggtttcttgattgcaaagtgtatatgggaggct |
15487354 |
T |
 |
| Q |
213 |
gatcaatt---aacagtt-acttttcttcttg-agatgagaaatgaaactgttgaagtagaaagtgtttagaagtgtgtttccaagagtggttttattta |
307 |
Q |
| |
|
||| |||| ||||||| ||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
15487353 |
gattaattagaaacagttaactttccttcttgaagataagaaatgaaactgttgaagtagaaagtgtttagaagtgtgtttccaagggtggttttattta |
15487254 |
T |
 |
| Q |
308 |
tagacaccagttat |
321 |
Q |
| |
|
|||| ||||||||| |
|
|
| T |
15487253 |
tagataccagttat |
15487240 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 13 - 321
Target Start/End: Complemental strand, 15448686 - 15448385
Alignment:
| Q |
13 |
gtttcagtgtttctttgaacctttgacaatactctccttgtgctgacattcttgaacaacaatgatctttcaataaagttcctgttggagacttgaaatg |
112 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
15448686 |
gtttcagtgtttatttgaacctttggcaatactctccttgtgctgacattcttgaacaacaatgctctttcagtaaagttcctgttggagacttgaaatg |
15448587 |
T |
 |
| Q |
113 |
gtttgtgttgtgggttggtagtggaagaggagggcttagtcttggtcattgagtgattggtatggtggatctcttgattgcaaagtgtatatgggtgggt |
212 |
Q |
| |
|
|||||||||||||||| ||||||||||| || ||||||| ||||||||||||||||| | |||||||||||||||||||||||| |||| |
|
|
| T |
15448586 |
gtttgtgttgtgggttcgtagtggaagaaga------------ggtcatttagtgattggtatggtgggtttcttgattgcaaagtgtatatgggagggt |
15448499 |
T |
 |
| Q |
213 |
gatcaatt---aacagtt-acttttcttcttg-agatgagaaatgaaactgttgaagtagaaagtgtttagaagtgtgtttccaagagtggttttattta |
307 |
Q |
| |
|
||| |||| ||||||| ||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
15448498 |
gattaattagcaacagttaactttccttcttgaagataagaaatgaaactgttgaagtagaaagtgtttagaagtgtgtttccaagggtggttttattta |
15448399 |
T |
 |
| Q |
308 |
tagacaccagttat |
321 |
Q |
| |
|
|||| ||||||||| |
|
|
| T |
15448398 |
tagataccagttat |
15448385 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 384 - 611
Target Start/End: Complemental strand, 15448310 - 15448080
Alignment:
| Q |
384 |
gttatataaacatggtttaataaaactctgctatgaaaaagtgctatagcattgttatagccgctatttcgtaatattttgtacgaaataaattagcatg |
483 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
15448310 |
gttatataaacatggtttaataaaactctgctatgaaaaagtgctatagcagtgttatagccgctatttcgtaatattttgtacgaaatatattagcatg |
15448211 |
T |
 |
| Q |
484 |
gaaaaacaatgatttgcgtaatttctgcaatgcaatggtgataaaccgcc---tcagccacnnnnnnnaacttcatcatatgattttggcttgaattggt |
580 |
Q |
| |
|
||||||||||||||||| |||||||| ||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
15448210 |
gaaaaacaatgatttgcataatttctacaatgcaatggtgataagccgccgcctcagccactttttttaacttcatcatatgattttggcttgaattggt |
15448111 |
T |
 |
| Q |
581 |
actggaatttgtgttgtcagatggctataag |
611 |
Q |
| |
|
|||||||||||||||||| |||||||||||| |
|
|
| T |
15448110 |
actggaatttgtgttgtcggatggctataag |
15448080 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 8 - 221
Target Start/End: Complemental strand, 16942291 - 16942077
Alignment:
| Q |
8 |
ttggtgtttcagtgtttctttgaacctttgacaatactctccttgtgctgacattcttgaacaacaatgatctttcaataaagttcctgttggagacttg |
107 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
16942291 |
ttggtgtttcagtgttactttgaacctttgacaatagtctcctggtgctgacattcttgaacaacaatgctctttcattaaagttcctgttggagacttg |
16942192 |
T |
 |
| Q |
108 |
aaatggtttgtgttgtgggttggtagtggaagaggagggcttagtcttggtcattgagtgattggtatggtggatctcttgattgc-aaagtgtatatgg |
206 |
Q |
| |
|
|||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||| ||||||||||||| |
|
|
| T |
16942191 |
aaatggtttgtgttttgggttcgtagtggaagaggagggcttagtcttggtcatttagtgattggtatggtgggtttcttgattgcaaaagtgtatatgg |
16942092 |
T |
 |
| Q |
207 |
gtgggtgatcaatta |
221 |
Q |
| |
|
|||||||| ||||| |
|
|
| T |
16942091 |
ctgggtgattaatta |
16942077 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 384 - 584
Target Start/End: Complemental strand, 15428770 - 15428567
Alignment:
| Q |
384 |
gttatataaacatggtttaataaaactctgctatgaaaaagtgctatagcattgttatagccgctatttcgtaatattttgtacgaaataaattagcatg |
483 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
15428770 |
gttatataaacatggtttaataaaactctgctatgaaaaagtgctatagcagtgttatagccgctatttcgtaatattttgtacgaaatatattagcatg |
15428671 |
T |
 |
| Q |
484 |
gaaaaacaatgatttgcgtaatttctgcaatgcaatggtgataaaccgcc---tcagccacnnnnnnnaacttcatcatatgattttggcttgaattggt |
580 |
Q |
| |
|
||||||||||||||||| |||||||| ||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
15428670 |
gaaaaacaatgatttgcataatttctacaatgcaatggtgataagccgccgcctcagccactttttttaacttcatcatatgattttggcttgaattggt |
15428571 |
T |
 |
| Q |
581 |
actg |
584 |
Q |
| |
|
|||| |
|
|
| T |
15428570 |
actg |
15428567 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 384 - 584
Target Start/End: Complemental strand, 15487165 - 15486962
Alignment:
| Q |
384 |
gttatataaacatggtttaataaaactctgctatgaaaaagtgctatagcattgttatagccgctatttcgtaatattttgtacgaaataaattagcatg |
483 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
15487165 |
gttatataaacatggtttaataaaactctgctatgaaaaagtgctatagcagtgttatagccgctatttcgtaatattttgtacgaaatatattagcatg |
15487066 |
T |
 |
| Q |
484 |
gaaaaacaatgatttgcgtaatttctgcaatgcaatggtgataaaccgcc---tcagccacnnnnnnnaacttcatcatatgattttggcttgaattggt |
580 |
Q |
| |
|
||||||||||||||||| |||||||| ||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
15487065 |
gaaaaacaatgatttgcataatttctacaatgcaatggtgataagccgccgcctcagccactttttttaacttcatcatatgattttggcttgaattggt |
15486966 |
T |
 |
| Q |
581 |
actg |
584 |
Q |
| |
|
|||| |
|
|
| T |
15486965 |
actg |
15486962 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 423 - 612
Target Start/End: Complemental strand, 15539429 - 15539234
Alignment:
| Q |
423 |
agtgctatagcattgttatagccgctatttcgtaatattttgtacgaaataaattagcatggaaaaacaatgatttgcgtaatttctgcaatgcaatggt |
522 |
Q |
| |
|
|||||||||||| ||| |||| || |||||||||| ||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
15539429 |
agtgctatagcagtgtcatagtcgttatttcgtaaaattttgtacaaaataaattagcatagaaaaacaatgatttgggtaatttctgcaatgcaatggt |
15539330 |
T |
 |
| Q |
523 |
gata---aaccgcctcagccacnnnnnnnaact---tcatcatatgattttggcttgaattggtactggaatttgtgttgtcagatggctataagt |
612 |
Q |
| |
|
|||| |||||||||||||| | | | | ||||||||||||||||||||||||||||||||| | |||||||||||||| |||| |
|
|
| T |
15539329 |
gatataccaccgcctcagccactatttaacaataaattagcatatgattttggcttgaattggtactggaattgtttttgtcagatggctacaagt |
15539234 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 423 - 509
Target Start/End: Original strand, 15480079 - 15480171
Alignment:
| Q |
423 |
agtgctatagcattgttatagccgctatttcgtaatattttgtacgaaataaattagcat------ggaaaaacaatgatttgcgtaatttct |
509 |
Q |
| |
|
|||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
15480079 |
agtgctatagcagcgtcatagccgttatttcgtaatattttgtacgaaataaattagcatagaaaaagaaaaacaatgatttgcgtaatttct |
15480171 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 384 - 448
Target Start/End: Complemental strand, 16941942 - 16941878
Alignment:
| Q |
384 |
gttatataaacatggtttaataaaactctgctatgaaaaagtgctatagcattgttatagccgct |
448 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||| |
|
|
| T |
16941942 |
gttatataaacatggttaaataaaactctcctatgaaaaagtgctatagcagcgttatagccgct |
16941878 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 439 - 524
Target Start/End: Complemental strand, 15432111 - 15432026
Alignment:
| Q |
439 |
tatagccgctatttcgtaatattttgtacgaaataaattagcatggaaaaacaatgatttgcgtaatttctgcaatgcaatggtga |
524 |
Q |
| |
|
||||||||||||||||||||| ||||| | ||||||| || | ||||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
15432111 |
tatagccgctatttcgtaatactttgtgctaaataaagtatcgcaaaaaaacaatgatttgtgtaaattctgcaatgcaatggtga |
15432026 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 439 - 524
Target Start/End: Complemental strand, 15490466 - 15490381
Alignment:
| Q |
439 |
tatagccgctatttcgtaatattttgtacgaaataaattagcatggaaaaacaatgatttgcgtaatttctgcaatgcaatggtga |
524 |
Q |
| |
|
||||||||||||||||||||| ||||| | ||||||| || | ||||||||||||||| |||| ||||| ||||||||||||| |
|
|
| T |
15490466 |
tatagccgctatttcgtaatactttgtgctaaataaagtatcgcaaaaaaacaatgatttgtgtaaattctggaatgcaatggtga |
15490381 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 555 - 612
Target Start/End: Complemental strand, 16944989 - 16944932
Alignment:
| Q |
555 |
atcatatgattttggcttgaattggtactggaatttgtgttgtcagatggctataagt |
612 |
Q |
| |
|
||||| ||||||||| |||||||||| | ||||||||||||| |||||||||| |||| |
|
|
| T |
16944989 |
atcatctgattttggtttgaattggtgcaggaatttgtgttggcagatggctacaagt |
16944932 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 555 - 607
Target Start/End: Complemental strand, 15431982 - 15431930
Alignment:
| Q |
555 |
atcatatgattttggcttgaattggtactggaatttgtgttgtcagatggcta |
607 |
Q |
| |
|
||||| ||||||||| |||||||||| | ||||||||||||| |||||||||| |
|
|
| T |
15431982 |
atcatctgattttggtttgaattggtgcaggaatttgtgttggcagatggcta |
15431930 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 554 - 607
Target Start/End: Complemental strand, 15558473 - 15558420
Alignment:
| Q |
554 |
catcatatgattttggcttgaattggtactggaatttgtgttgtcagatggcta |
607 |
Q |
| |
|
|||||| | ||||||| |||||||||| | ||||||||||||| |||||||||| |
|
|
| T |
15558473 |
catcatcttattttggtttgaattggtgcaggaatttgtgttggcagatggcta |
15558420 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 484 - 524
Target Start/End: Complemental strand, 15558552 - 15558512
Alignment:
| Q |
484 |
gaaaaacaatgatttgcgtaatttctgcaatgcaatggtga |
524 |
Q |
| |
|
||||| |||||||||| |||| ||||||||||||||||||| |
|
|
| T |
15558552 |
gaaaatcaatgatttgtgtaaattctgcaatgcaatggtga |
15558512 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1195 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1195
Description:
Target: scaffold1195; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 554 - 612
Target Start/End: Complemental strand, 1123 - 1065
Alignment:
| Q |
554 |
catcatatgattttggcttgaattggtactggaatttgtgttgtcagatggctataagt |
612 |
Q |
| |
|
|||||||||||||||| |||||||||| | ||||||||||||| || ||||||| |||| |
|
|
| T |
1123 |
catcatatgattttggtttgaattggtgcaggaatttgtgttggcatatggctacaagt |
1065 |
T |
 |
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Target: chr8 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 418 - 452
Target Start/End: Complemental strand, 16661165 - 16661131
Alignment:
| Q |
418 |
gaaaaagtgctatagcattgttatagccgctattt |
452 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |
|
|
| T |
16661165 |
gaaaaagtgctatagtattgttatagccgctattt |
16661131 |
T |
 |
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