View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8518A_high_42 (Length: 207)
Name: NF8518A_high_42
Description: NF8518A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8518A_high_42 |
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Alignment Details
Target: chr2 (Bit Score: 89; Significance: 4e-43; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 13116996 - 13117100
Alignment:
| Q |
23 |
aatacgtgttatatactattgaaagaacttgagcaatatgactcttgtatgatgattgtattatattttttgtctctaatgtgagaactaattttgctga |
122 |
Q |
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| T |
13116996 |
aatacgtcttatatactattgtaagaacttgagcaatatgactcttgtatgataattgtattatattttttgtctctaatgtgagaactaatgttgctga |
13117095 |
T |
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| Q |
123 |
gcaaa |
127 |
Q |
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||||| |
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| T |
13117096 |
gcaaa |
13117100 |
T |
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