View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8518A_low_104 (Length: 331)
Name: NF8518A_low_104
Description: NF8518A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8518A_low_104 |
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Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 18 - 292
Target Start/End: Original strand, 30355930 - 30356202
Alignment:
| Q |
18 |
gcaatataacctaataaaggaaaaaatgaatatgacaattggaagaaagggaaaaagaagtaggaatacccaaacgatcaaagggagatnnnnnnnnnnc |
117 |
Q |
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| T |
30355930 |
gcaatataacctaataaagtaaaaagtgaatatgacaattggatgaaagggaaaaagaagtaggaatacccaaacgatcaaagagagataaaaaaaa--c |
30356027 |
T |
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| Q |
118 |
acaagaataatgggaagaaagaaccttagagctatgcttgatctattcacaagcagtcacaatatagaaactgcacattttcaatggaaaagataggaac |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30356028 |
acaagaataatgggaagaaagaaccttagagctatgcttgatctattcacaagcagtcacaatatagaaactgcacattttcaatggaaaagataggaac |
30356127 |
T |
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| Q |
218 |
aacaaaaatagttttctcaaattgatagtctattccacttgtctgtcttcaatgtgtttgaatttgtacgttata |
292 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |
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| T |
30356128 |
aacaaaaatagttttctcaaattgatagtctattccacttgtttgtcttcaatgtgattgaatttgtacgttata |
30356202 |
T |
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