View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8518A_low_150 (Length: 290)
Name: NF8518A_low_150
Description: NF8518A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8518A_low_150 |
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Alignment Details
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 14 - 270
Target Start/End: Original strand, 32528233 - 32528489
Alignment:
| Q |
14 |
gaaacaaacaaccgaagatgacactttctagtactaccaaaactgtctcttagctacttttagtactnnnnnnnntgatttagagagagaaatgtgatct |
113 |
Q |
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| T |
32528233 |
gaaacaaacaacctaagatgacactttctagtactaccaaaactgtctcttagctacttttagtactaaaaaaaatgatttagagagagaaatgtgatct |
32528332 |
T |
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| Q |
114 |
acacaaaagacttgaactacatcttaggattgagtgtgacagaaagaaagttaatatgagagtaactctaggaacaaaataaggagagtggagcgagaac |
213 |
Q |
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| T |
32528333 |
acacaaaagacttgaactacatcttaggattgagtgtgacagaaagaaagttaatatgagagtaactctaggaacaaaataaggagagtggagcgagaac |
32528432 |
T |
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| Q |
214 |
tttggcgaaaaatgagtgaatattactctcattcatagttactttagatttgcttgc |
270 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32528433 |
tttggcgaaaaatgagtgaatattactctcattcatagttactttagatttgcttgc |
32528489 |
T |
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