View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8518A_low_226 (Length: 249)
Name: NF8518A_low_226
Description: NF8518A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8518A_low_226 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 9 - 249
Target Start/End: Original strand, 14459128 - 14459368
Alignment:
| Q |
9 |
aatgaaataggatatataaacttaggaataattcaatgcagtaaatacctcgaatattttattgcaccattcctcggactcattgttgagtaaatgacgc |
108 |
Q |
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| T |
14459128 |
aatgaaataggatatataaacttaggaataattcaatgcagtaattacctcgaatattttattgcaccattcctcggactcattgttgagtaaatgacgc |
14459227 |
T |
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| Q |
109 |
aaaatttgttgatgatgtgttggttctgacataagttttcccttaccttcattatcttttattgctttcttatatgcatgccaccttatatgattctctg |
208 |
Q |
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| T |
14459228 |
aaaatttgttgatgatgtgttggttctgacataagttttcccttaccttcattatcttttattgctttcttatatgcatgccaccttatatgattctctg |
14459327 |
T |
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| Q |
209 |
acttgtagaattttgcatagtagaaaaattgtacttcacct |
249 |
Q |
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| T |
14459328 |
acttgtagaattttgcatagtagaaaaattgtacttcacct |
14459368 |
T |
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