View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8518A_low_253 (Length: 244)
Name: NF8518A_low_253
Description: NF8518A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8518A_low_253 |
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Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 14459356 - 14459580
Alignment:
| Q |
1 |
ttgtacttcacctatggtcttgctaccaataaatcttttcagttgagaaaagtttttgccaaatataaacaatccaagcattaaactgtctacttctggt |
100 |
Q |
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| T |
14459356 |
ttgtacttcacctatggtcttgctaccaatgaatcttttcagttgagaaaagtttttgccaaatataaacaatccaagcattaaactgtctacttctggt |
14459455 |
T |
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| Q |
101 |
ttagtccaagtatcatttgaacatttgttgaaggtaggtgtcattgtagtatcatctggactctctggagaataattgcagttgaatttcaatatgaaag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
14459456 |
ttagtccaagtatcatttgaacatttgttgaaggtaggtgtctttgtagtatcatctggactctctggagaataattgcagtcgaatttcaatatgaaag |
14459555 |
T |
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| Q |
201 |
atggaatttctgcttggtatttgtt |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
14459556 |
atggaatttctgcttggtatttgtt |
14459580 |
T |
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