View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8518A_low_312 (Length: 230)
Name: NF8518A_low_312
Description: NF8518A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8518A_low_312 |
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Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 6 - 221
Target Start/End: Complemental strand, 26329055 - 26328840
Alignment:
| Q |
6 |
aatctaaacacaaaatcatcaaaagggtttcaagatttctacctatactcttcatatttatcaaagtctttccaatcaccatgtttgttactagccatta |
105 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
26329055 |
aatctaaacacaaaatcatcaaaagggtttcaagatttctacctatactcttcatatttatcaaagtctttccaatcaccatgtttgttactcgccatta |
26328956 |
T |
|
| Q |
106 |
caatgaaggagatcagagagaatagcagaccgatccctctcaatcctaatgatcctctctttatcaaatcctccctcttccatcgccgcaatattccagc |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26328955 |
caatgaaggagatcagagagaatagcagaccgatccctctcaatcctaatgatcctctctttatcaaatcctccctcttccatcgccgcaatattccagc |
26328856 |
T |
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| Q |
206 |
gatccctgcagtcgcc |
221 |
Q |
| |
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|||||||||||||||| |
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| T |
26328855 |
gatccctgcagtcgcc |
26328840 |
T |
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