View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8518A_low_324 (Length: 230)
Name: NF8518A_low_324
Description: NF8518A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8518A_low_324 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 10 - 230
Target Start/End: Original strand, 23377644 - 23377864
Alignment:
| Q |
10 |
tggacatcataaatcaaagtgttacaataactattctggttatgtcgaattccttgttactggggtgggataagacgtgattccaactgtatacaagtta |
109 |
Q |
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| T |
23377644 |
tggacatcataaatcaaagtgttacaataactattctggttatgtcgaattccttgttactggggtgggataagacgtgattccaactgtatacgaggta |
23377743 |
T |
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| Q |
110 |
tgtttgttttgattttggttatgatcattatggcttctacgtgttatttgtttgtgtcatgtggtgtataatcattggaatttggaacgtagtgatttat |
209 |
Q |
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| T |
23377744 |
tgtttgttttgattttggttatgatcattatggcttctacgtgttatttgtttgtgtcatgtggtgtataatcattggaatttggaacgtagtgatttat |
23377843 |
T |
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| Q |
210 |
ttatggcaatagcagcaaatg |
230 |
Q |
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||||||||||||||||||||| |
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| T |
23377844 |
ttatggcaatagcagcaaatg |
23377864 |
T |
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