View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8518A_low_349 (Length: 227)
Name: NF8518A_low_349
Description: NF8518A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8518A_low_349 |
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Alignment Details
Target: chr7 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 23 - 209
Target Start/End: Original strand, 32844843 - 32845030
Alignment:
| Q |
23 |
aaattcaatgtcaaactcaacatgcaagaaatgaaagataaatcgattgaagtaatatttgaataacaaattaagaacaacactagaattatcttcatag |
122 |
Q |
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| T |
32844843 |
aaattcaatgtcaatctcaacatgcaagaaatgaaagataaatcaattgaagtaatatttgaataacaaattaagaacaacactagaattatcttcatag |
32844942 |
T |
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| Q |
123 |
-ttttacttattaaagagaaagtcctcatgggtatgcctattggtagaatcgttcatttgcaaagttacattttccaccctaaccagc |
209 |
Q |
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| T |
32844943 |
tttttacttattaaagagaaagtcctcatgggtatgcctattggtagaatcgttcatttggaaagttacattttccaccctaaccagc |
32845030 |
T |
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