View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8518A_low_350 (Length: 227)

Name: NF8518A_low_350
Description: NF8518A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8518A_low_350
NF8518A_low_350
[»] chr2 (76 HSPs)
chr2 (20-219)||(7650076-7650274)
chr2 (5-94)||(2544361-2544450)
chr2 (5-94)||(2544392-2544481)
chr2 (28-91)||(19268073-19268136)
chr2 (5-83)||(5559450-5559528)
chr2 (5-94)||(31024181-31024270)
chr2 (152-219)||(28526903-28526970)
chr2 (12-94)||(23143534-23143616)
chr2 (12-94)||(23555324-23555406)
chr2 (5-90)||(35498136-35498220)
chr2 (39-93)||(6648162-6648216)
chr2 (5-94)||(25270897-25270986)
chr2 (5-94)||(33129084-33129173)
chr2 (6-75)||(33618226-33618295)
chr2 (5-94)||(41056929-41057018)
chr2 (14-94)||(1961359-1961439)
chr2 (6-94)||(15119787-15119875)
chr2 (5-93)||(38181771-38181859)
chr2 (159-219)||(42881378-42881438)
chr2 (45-92)||(26003447-26003494)
chr2 (5-72)||(37182857-37182924)
chr2 (173-219)||(7213435-7213481)
chr2 (20-94)||(11093540-11093614)
chr2 (173-219)||(15859443-15859489)
chr2 (5-91)||(33129115-33129201)
chr2 (173-219)||(41436039-41436085)
chr2 (157-219)||(44194596-44194657)
chr2 (165-218)||(435186-435239)
chr2 (5-94)||(3098167-3098256)
chr2 (158-207)||(5212071-5212120)
chr2 (5-90)||(22352484-22352568)
chr2 (5-94)||(38465799-38465888)
chr2 (29-94)||(38871454-38871519)
chr2 (152-208)||(3100339-3100395)
chr2 (5-73)||(14952806-14952874)
chr2 (5-73)||(15080879-15080947)
chr2 (6-94)||(23143496-23143584)
chr2 (6-94)||(23555286-23555374)
chr2 (158-222)||(43950537-43950600)
chr2 (5-73)||(44402125-44402193)
chr2 (5-73)||(44949373-44949441)
chr2 (155-222)||(4043301-4043367)
chr2 (43-94)||(8266323-8266374)
chr2 (6-93)||(32630417-32630504)
chr2 (5-83)||(35498163-35498241)
chr2 (177-207)||(2427323-2427353)
chr2 (5-91)||(5559470-5559556)
chr2 (173-207)||(6972657-6972691)
chr2 (172-222)||(8385035-8385084)
chr2 (173-207)||(9724841-9724875)
chr2 (153-207)||(18181327-18181381)
chr2 (173-207)||(19009805-19009839)
chr2 (25-91)||(21183388-21183454)
chr2 (173-219)||(28925949-28925995)
chr2 (177-219)||(30757669-30757711)
chr2 (158-200)||(33602352-33602394)
chr2 (173-219)||(43077827-43077872)
chr2 (5-75)||(44949383-44949453)
chr2 (31-92)||(85751-85812)
chr2 (33-94)||(7079380-7079441)
chr2 (5-94)||(11726536-11726625)
chr2 (5-94)||(13333488-13333577)
chr2 (45-94)||(19951526-19951575)
chr2 (25-90)||(29819784-29819849)
chr2 (5-94)||(32630447-32630536)
chr2 (45-94)||(41056898-41056947)
chr2 (173-206)||(44534601-44534634)
chr2 (14-94)||(596077-596157)
chr2 (5-73)||(5094871-5094939)
chr2 (176-208)||(14136727-14136759)
chr2 (45-93)||(15916744-15916792)
chr2 (5-73)||(28602188-28602256)
chr2 (182-222)||(34235018-34235058)
chr2 (5-65)||(41805315-41805375)
chr2 (5-73)||(42230563-42230631)
chr2 (5-73)||(43514787-43514855)
[»] chr8 (67 HSPs)
chr8 (5-93)||(17871774-17871862)
chr8 (5-93)||(17986205-17986293)
chr8 (5-94)||(17871804-17871893)
chr8 (5-87)||(6189651-6189733)
chr8 (5-94)||(17986235-17986324)
chr8 (5-93)||(7484658-7484746)
chr8 (10-94)||(26998679-26998763)
chr8 (10-93)||(26998715-26998798)
chr8 (5-65)||(2627213-2627273)
chr8 (173-219)||(39171503-39171549)
chr8 (32-93)||(3225848-3225909)
chr8 (12-93)||(6189682-6189763)
chr8 (14-94)||(10934653-10934733)
chr8 (43-83)||(37288578-37288618)
chr8 (27-94)||(13964429-13964496)
chr8 (6-93)||(31271543-31271630)
chr8 (172-219)||(32241525-32241572)
chr8 (27-94)||(41753768-41753835)
chr8 (20-82)||(9678801-9678863)
chr8 (173-219)||(33191010-33191056)
chr8 (5-75)||(42666146-42666216)
chr8 (12-65)||(8793762-8793815)
chr8 (5-90)||(11295705-11295790)
chr8 (5-93)||(2627215-2627303)
chr8 (5-73)||(2827387-2827455)
chr8 (45-93)||(15037761-15037809)
chr8 (5-73)||(24418912-24418979)
chr8 (5-65)||(37288598-37288658)
chr8 (159-219)||(38252539-38252599)
chr8 (5-73)||(38815834-38815902)
chr8 (152-207)||(5391987-5392042)
chr8 (173-208)||(14689920-14689955)
chr8 (173-208)||(25174697-25174732)
chr8 (173-208)||(27571455-27571490)
chr8 (159-222)||(29615744-29615807)
chr8 (173-208)||(32231832-32231867)
chr8 (173-208)||(45421052-45421087)
chr8 (173-207)||(886561-886595)
chr8 (172-222)||(3384491-3384540)
chr8 (173-219)||(22325056-22325102)
chr8 (40-94)||(24052904-24052958)
chr8 (173-207)||(41726481-41726515)
chr8 (32-65)||(2382625-2382658)
chr8 (5-94)||(5888346-5888435)
chr8 (5-94)||(5888377-5888466)
chr8 (5-66)||(9331330-9331391)
chr8 (32-93)||(10335210-10335271)
chr8 (5-94)||(11295674-11295763)
chr8 (171-208)||(12958294-12958331)
chr8 (5-94)||(13841858-13841946)
chr8 (45-94)||(27502911-27502960)
chr8 (173-222)||(31410706-31410755)
chr8 (5-94)||(36308002-36308090)
chr8 (25-94)||(45045438-45045507)
chr8 (6-75)||(45145644-45145713)
chr8 (31-75)||(5420216-5420260)
chr8 (5-65)||(9878954-9879014)
chr8 (5-93)||(13080129-13080217)
chr8 (155-207)||(26570272-26570324)
chr8 (5-65)||(33070206-33070266)
chr8 (183-219)||(33925185-33925221)
chr8 (5-73)||(36308545-36308613)
chr8 (5-73)||(36314889-36314957)
chr8 (5-73)||(40305053-40305121)
chr8 (5-73)||(43295929-43295997)
chr8 (173-205)||(45197571-45197603)
chr8 (5-65)||(45441143-45441203)
[»] chr7 (65 HSPs)
chr7 (5-94)||(28752120-28752209)
chr7 (5-93)||(28752090-28752178)
chr7 (5-93)||(29168374-29168462)
chr7 (14-94)||(4089139-4089219)
chr7 (5-84)||(43813166-43813245)
chr7 (173-219)||(5083575-5083621)
chr7 (173-219)||(46095549-46095595)
chr7 (5-94)||(7701198-7701287)
chr7 (13-94)||(25245192-25245273)
chr7 (9-94)||(31115654-31115739)
chr7 (158-219)||(37157116-37157176)
chr7 (159-219)||(11616507-11616567)
chr7 (5-89)||(29168404-29168488)
chr7 (159-219)||(46288532-46288592)
chr7 (12-75)||(2610220-2610283)
chr7 (173-208)||(21387718-21387753)
chr7 (32-94)||(21586824-21586886)
chr7 (173-219)||(31581544-31581590)
chr7 (173-219)||(40590926-40590972)
chr7 (33-94)||(6803442-6803503)
chr7 (159-208)||(7425991-7426040)
chr7 (12-65)||(39153339-39153392)
chr7 (12-73)||(42117508-42117569)
chr7 (38-94)||(8127901-8127957)
chr7 (5-73)||(8169128-8169195)
chr7 (5-73)||(10300852-10300920)
chr7 (5-73)||(10595532-10595600)
chr7 (171-207)||(41059356-41059392)
chr7 (39-94)||(2943222-2943277)
chr7 (27-94)||(12274819-12274886)
chr7 (173-212)||(12308339-12308378)
chr7 (173-208)||(17265987-17266022)
chr7 (173-208)||(23111642-23111677)
chr7 (39-94)||(34478310-34478365)
chr7 (153-208)||(39498614-39498669)
chr7 (13-52)||(47538812-47538851)
chr7 (13-52)||(47545369-47545408)
chr7 (173-219)||(2846777-2846823)
chr7 (173-219)||(5724808-5724854)
chr7 (5-75)||(8595176-8595246)
chr7 (5-75)||(21099273-21099342)
chr7 (153-207)||(28923340-28923394)
chr7 (5-91)||(30138801-30138887)
chr7 (173-219)||(30462976-30463022)
chr7 (5-75)||(32599704-32599773)
chr7 (173-219)||(34963912-34963958)
chr7 (172-206)||(36194757-36194791)
chr7 (173-207)||(40023839-40023873)
chr7 (45-94)||(10599073-10599122)
chr7 (45-94)||(23818434-23818483)
chr7 (12-93)||(31903002-31903083)
chr7 (173-222)||(36117622-36117670)
chr7 (173-206)||(37264273-37264306)
chr7 (5-90)||(41699097-41699181)
chr7 (5-94)||(46022589-46022678)
chr7 (14-82)||(3882861-3882929)
chr7 (5-73)||(4027259-4027327)
chr7 (5-73)||(8571423-8571491)
chr7 (5-65)||(16777931-16777991)
chr7 (5-73)||(19058941-19059009)
chr7 (5-65)||(23797389-23797449)
chr7 (46-94)||(27330590-27330638)
chr7 (171-219)||(29257505-29257553)
chr7 (5-73)||(37066223-37066291)
chr7 (5-73)||(41699087-41699155)
[»] chr5 (94 HSPs)
chr5 (5-94)||(25694125-25694214)
chr5 (5-94)||(25694156-25694245)
chr5 (5-94)||(13391541-13391630)
chr5 (14-83)||(32911491-32911560)
chr5 (158-222)||(25814309-25814373)
chr5 (5-83)||(7613399-7613477)
chr5 (5-82)||(12922394-12922471)
chr5 (12-93)||(23262482-23262563)
chr5 (6-65)||(1100096-1100155)
chr5 (12-94)||(7613368-7613450)
chr5 (6-83)||(4739578-4739654)
chr5 (158-219)||(7276328-7276389)
chr5 (173-222)||(42575737-42575786)
chr5 (5-73)||(13654540-13654607)
chr5 (173-217)||(14259627-14259671)
chr5 (171-207)||(42818862-42818898)
chr5 (32-83)||(32911560-32911611)
chr5 (39-94)||(33075140-33075195)
chr5 (31-82)||(34820647-34820698)
chr5 (173-219)||(4412343-4412389)
chr5 (40-94)||(18652841-18652895)
chr5 (173-219)||(35646191-35646237)
chr5 (40-94)||(37067622-37067676)
chr5 (12-93)||(4349121-4349201)
chr5 (40-93)||(13356213-13356266)
chr5 (14-94)||(14772558-14772636)
chr5 (172-209)||(15898151-15898188)
chr5 (45-94)||(17153504-17153553)
chr5 (5-94)||(17967356-17967445)
chr5 (6-75)||(19216315-19216384)
chr5 (5-46)||(22227039-22227080)
chr5 (5-90)||(33545825-33545910)
chr5 (5-73)||(4162834-4162902)
chr5 (42-94)||(4297275-4297327)
chr5 (32-72)||(5504409-5504449)
chr5 (173-209)||(8941213-8941249)
chr5 (5-93)||(11795777-11795865)
chr5 (5-73)||(16899728-16899796)
chr5 (5-65)||(17625679-17625739)
chr5 (5-73)||(18003888-18003956)
chr5 (22-94)||(22227039-22227111)
chr5 (38-94)||(25792920-25792976)
chr5 (58-94)||(25941763-25941799)
chr5 (5-65)||(27314514-27314574)
chr5 (5-73)||(31691004-31691072)
chr5 (6-73)||(2673878-2673945)
chr5 (173-208)||(4044589-4044624)
chr5 (173-207)||(4194600-4194634)
chr5 (173-207)||(9426667-9426701)
chr5 (173-207)||(13016478-13016512)
chr5 (173-207)||(13087856-13087890)
chr5 (173-207)||(13597989-13598023)
chr5 (173-207)||(14184163-14184197)
chr5 (27-73)||(15475903-15475949)
chr5 (173-207)||(20369235-20369269)
chr5 (173-207)||(24534562-24534596)
chr5 (173-207)||(31090264-31090298)
chr5 (173-219)||(39008089-39008135)
chr5 (5-75)||(43176280-43176350)
chr5 (48-94)||(43438339-43438385)
chr5 (30-75)||(884944-884989)
chr5 (49-94)||(4738318-4738363)
chr5 (45-94)||(4967724-4967773)
chr5 (25-90)||(5259399-5259464)
chr5 (32-93)||(7505164-7505225)
chr5 (173-222)||(13135713-13135762)
chr5 (5-94)||(13654550-13654638)
chr5 (5-82)||(16056786-16056863)
chr5 (25-94)||(29177723-29177792)
chr5 (45-94)||(32398084-32398133)
chr5 (5-54)||(32911511-32911560)
chr5 (173-218)||(33012314-33012359)
chr5 (5-82)||(33545852-33545929)
chr5 (174-207)||(35585731-35585764)
chr5 (20-73)||(37685001-37685054)
chr5 (20-52)||(4409389-4409421)
chr5 (5-73)||(6168710-6168778)
chr5 (5-73)||(6279441-6279509)
chr5 (159-207)||(7613653-7613701)
chr5 (28-72)||(8468420-8468464)
chr5 (5-73)||(8618438-8618506)
chr5 (5-65)||(8959824-8959884)
chr5 (5-73)||(12891319-12891387)
chr5 (30-94)||(14303093-14303157)
chr5 (6-90)||(18033369-18033453)
chr5 (5-73)||(18753642-18753710)
chr5 (5-73)||(18753652-18753720)
chr5 (5-73)||(24089073-24089141)
chr5 (5-65)||(27314516-27314576)
chr5 (5-73)||(31691014-31691082)
chr5 (31-75)||(32146894-32146938)
chr5 (27-87)||(33821059-33821119)
chr5 (5-73)||(41062516-41062584)
chr5 (5-73)||(43176292-43176360)
[»] chr4 (84 HSPs)
chr4 (6-93)||(2401051-2401138)
chr4 (5-94)||(55936028-55936117)
chr4 (5-94)||(52914039-52914128)
chr4 (5-94)||(34616225-34616314)
chr4 (12-93)||(46518468-46518549)
chr4 (5-94)||(47181569-47181658)
chr4 (5-94)||(48402452-48402541)
chr4 (5-93)||(2253965-2254052)
chr4 (155-207)||(49448781-49448833)
chr4 (171-222)||(18873050-18873101)
chr4 (43-94)||(43616224-43616275)
chr4 (173-219)||(1825349-1825395)
chr4 (5-94)||(19934679-19934768)
chr4 (5-94)||(39160855-39160944)
chr4 (5-94)||(54164854-54164943)
chr4 (6-82)||(9992624-9992700)
chr4 (5-73)||(28702102-28702170)
chr4 (5-73)||(34321413-34321481)
chr4 (5-75)||(15641252-15641322)
chr4 (173-219)||(18849860-18849906)
chr4 (32-94)||(24798195-24798257)
chr4 (173-219)||(29644315-29644361)
chr4 (173-219)||(40881294-40881340)
chr4 (173-219)||(51527379-51527425)
chr4 (5-94)||(3094277-3094365)
chr4 (25-94)||(12672506-12672575)
chr4 (5-94)||(14061505-14061594)
chr4 (5-94)||(29006845-29006934)
chr4 (27-76)||(33150599-33150648)
chr4 (5-94)||(36786191-36786280)
chr4 (5-94)||(38381986-38382075)
chr4 (5-94)||(56364367-56364456)
chr4 (6-94)||(2253996-2254083)
chr4 (5-73)||(9011776-9011844)
chr4 (157-209)||(19688260-19688312)
chr4 (171-207)||(20964407-20964443)
chr4 (14-94)||(21142100-21142180)
chr4 (5-65)||(28702100-28702160)
chr4 (5-73)||(31808353-31808421)
chr4 (5-93)||(39533797-39533885)
chr4 (158-206)||(43335137-43335185)
chr4 (45-93)||(44171445-44171493)
chr4 (159-219)||(54729584-54729644)
chr4 (172-207)||(8974647-8974682)
chr4 (173-208)||(38319871-38319906)
chr4 (172-219)||(39979739-39979786)
chr4 (173-219)||(41203696-41203743)
chr4 (5-72)||(56328482-56328549)
chr4 (5-75)||(171169-171239)
chr4 (172-206)||(388534-388568)
chr4 (5-83)||(2401081-2401159)
chr4 (5-75)||(2994762-2994832)
chr4 (173-207)||(5291649-5291683)
chr4 (173-219)||(8294991-8295037)
chr4 (173-207)||(17237003-17237037)
chr4 (173-207)||(28330752-28330786)
chr4 (39-73)||(35967456-35967490)
chr4 (173-207)||(36047214-36047248)
chr4 (173-219)||(39053002-39053047)
chr4 (173-219)||(48740480-48740526)
chr4 (173-207)||(49218896-49218930)
chr4 (173-219)||(49812189-49812235)
chr4 (173-207)||(55360463-55360497)
chr4 (32-93)||(2582819-2582880)
chr4 (5-94)||(4406251-4406340)
chr4 (45-90)||(6462726-6462771)
chr4 (5-94)||(8826875-8826964)
chr4 (20-93)||(32645550-32645623)
chr4 (5-74)||(35967411-35967480)
chr4 (178-219)||(47787948-47787989)
chr4 (173-206)||(48400744-48400777)
chr4 (173-209)||(2906645-2906681)
chr4 (172-208)||(3503167-3503203)
chr4 (5-73)||(7695170-7695238)
chr4 (5-73)||(15641264-15641332)
chr4 (5-73)||(18327965-18328033)
chr4 (5-73)||(18437366-18437434)
chr4 (5-65)||(31860690-31860750)
chr4 (5-73)||(34709616-34709684)
chr4 (5-73)||(36235709-36235777)
chr4 (171-219)||(41710245-41710293)
chr4 (5-73)||(42911646-42911714)
chr4 (5-73)||(47628312-47628380)
chr4 (5-73)||(51126146-51126214)
[»] chr1 (100 HSPs)
chr1 (5-84)||(29043495-29043574)
chr1 (5-94)||(50308638-50308727)
chr1 (5-93)||(28038838-28038926)
chr1 (5-78)||(15290619-15290692)
chr1 (12-94)||(14891748-14891830)
chr1 (5-94)||(34953906-34953995)
chr1 (5-90)||(41007691-41007776)
chr1 (6-94)||(50308670-50308758)
chr1 (154-219)||(5442282-5442346)
chr1 (5-94)||(24981882-24981971)
chr1 (5-94)||(46906871-46906960)
chr1 (173-222)||(48242689-48242738)
chr1 (42-94)||(27864497-27864549)
chr1 (39-94)||(6156644-6156699)
chr1 (27-94)||(14890208-14890275)
chr1 (12-94)||(9675976-9676058)
chr1 (5-75)||(38149405-38149475)
chr1 (32-94)||(48083514-48083576)
chr1 (159-208)||(705462-705511)
chr1 (5-94)||(28038868-28038957)
chr1 (171-208)||(31798376-31798413)
chr1 (5-90)||(38847317-38847401)
chr1 (5-73)||(11989340-11989408)
chr1 (5-73)||(15311503-15311571)
chr1 (6-94)||(41007719-41007807)
chr1 (173-219)||(27698772-27698818)
chr1 (12-84)||(7918813-7918886)
chr1 (173-222)||(19533018-19533067)
chr1 (155-208)||(37643388-37643441)
chr1 (173-222)||(52830512-52830561)
chr1 (159-207)||(8773184-8773232)
chr1 (159-219)||(10370289-10370349)
chr1 (5-65)||(11989350-11989410)
chr1 (6-94)||(14967267-14967355)
chr1 (171-207)||(15290448-15290484)
chr1 (5-73)||(22954803-22954871)
chr1 (5-73)||(29070648-29070716)
chr1 (5-73)||(31327598-31327666)
chr1 (5-73)||(38847343-38847411)
chr1 (5-73)||(42761264-42761332)
chr1 (5-73)||(45925285-45925353)
chr1 (5-73)||(47912603-47912671)
chr1 (39-94)||(1602892-1602947)
chr1 (39-94)||(2122644-2122699)
chr1 (167-206)||(2219562-2219601)
chr1 (173-208)||(2886131-2886166)
chr1 (173-216)||(6784963-6785006)
chr1 (12-79)||(15290603-15290670)
chr1 (152-207)||(17342767-17342822)
chr1 (43-94)||(26158718-26158769)
chr1 (43-94)||(26172016-26172067)
chr1 (5-72)||(29070658-29070725)
chr1 (172-219)||(30749714-30749761)
chr1 (172-219)||(30771165-30771212)
chr1 (157-212)||(51049453-51049508)
chr1 (27-93)||(3549842-3549908)
chr1 (5-75)||(10008850-10008920)
chr1 (32-94)||(14885329-14885391)
chr1 (32-94)||(14885487-14885549)
chr1 (173-207)||(29756258-29756292)
chr1 (171-209)||(33149232-33149270)
chr1 (14-92)||(33765837-33765915)
chr1 (6-84)||(35544553-35544631)
chr1 (173-219)||(36467297-36467343)
chr1 (173-207)||(36784274-36784308)
chr1 (153-207)||(37925360-37925414)
chr1 (32-90)||(39362877-39362935)
chr1 (173-219)||(49944751-49944796)
chr1 (32-94)||(50550187-50550249)
chr1 (173-219)||(52432272-52432318)
chr1 (173-222)||(1859467-1859515)
chr1 (173-206)||(14358121-14358154)
chr1 (5-94)||(14967235-14967324)
chr1 (173-222)||(16451591-16451640)
chr1 (173-222)||(16460744-16460793)
chr1 (5-94)||(19175629-19175718)
chr1 (5-94)||(34953937-34954026)
chr1 (12-65)||(38834659-38834712)
chr1 (173-206)||(43895807-43895840)
chr1 (28-73)||(47991808-47991853)
chr1 (173-222)||(49494262-49494310)
chr1 (12-65)||(50155350-50155403)
chr1 (45-94)||(52923404-52923453)
chr1 (5-73)||(435247-435315)
chr1 (173-209)||(5115937-5115973)
chr1 (14-74)||(6169860-6169920)
chr1 (31-75)||(7230126-7230170)
chr1 (5-73)||(17387681-17387749)
chr1 (171-207)||(19161518-19161554)
chr1 (5-73)||(22954813-22954881)
chr1 (172-208)||(24131513-24131549)
chr1 (5-73)||(26040411-26040479)
chr1 (52-92)||(29374117-29374157)
chr1 (171-219)||(32347902-32347950)
chr1 (158-206)||(34877204-34877252)
chr1 (32-72)||(41161533-41161573)
chr1 (5-73)||(41563038-41563106)
chr1 (5-73)||(42761274-42761342)
chr1 (152-208)||(46536279-46536335)
chr1 (180-208)||(50773447-50773475)
[»] scaffold0065 (3 HSPs)
scaffold0065 (5-83)||(36875-36953)
scaffold0065 (5-93)||(36895-36983)
scaffold0065 (10-93)||(39155-39238)
[»] chr6 (39 HSPs)
chr6 (5-94)||(16121006-16121095)
chr6 (5-93)||(15517131-15517219)
chr6 (5-94)||(3203712-3203801)
chr6 (5-94)||(34379776-34379865)
chr6 (159-219)||(15081369-15081429)
chr6 (43-94)||(6797447-6797498)
chr6 (5-94)||(6797378-6797467)
chr6 (5-94)||(32254862-32254951)
chr6 (5-65)||(14173431-14173491)
chr6 (5-65)||(14177967-14178027)
chr6 (27-94)||(34170088-34170155)
chr6 (45-94)||(3203681-3203730)
chr6 (33-94)||(11174059-11174120)
chr6 (5-94)||(13462974-13463062)
chr6 (5-90)||(25371019-25371103)
chr6 (5-94)||(26527231-26527320)
chr6 (14-94)||(20704033-20704113)
chr6 (173-208)||(9755258-9755293)
chr6 (173-208)||(15325107-15325142)
chr6 (172-207)||(31723453-31723488)
chr6 (173-207)||(2310401-2310435)
chr6 (173-219)||(3604701-3604747)
chr6 (173-207)||(4552862-4552896)
chr6 (173-219)||(7301181-7301227)
chr6 (173-207)||(15351496-15351530)
chr6 (20-94)||(16199130-16199204)
chr6 (32-94)||(18886318-18886380)
chr6 (173-219)||(30064050-30064096)
chr6 (32-94)||(31996567-31996629)
chr6 (45-94)||(12104755-12104804)
chr6 (171-208)||(15371975-15372012)
chr6 (12-73)||(16120996-16121057)
chr6 (5-90)||(26597180-26597264)
chr6 (173-222)||(34441852-34441900)
chr6 (40-93)||(3199727-3199782)
chr6 (5-73)||(10118649-10118717)
chr6 (5-65)||(15517129-15517189)
chr6 (5-73)||(28034046-28034114)
chr6 (13-73)||(30507048-30507108)
[»] chr3 (68 HSPs)
chr3 (5-93)||(29241491-29241579)
chr3 (5-94)||(54595800-54595889)
chr3 (159-222)||(46786079-46786142)
chr3 (173-219)||(21296604-21296650)
chr3 (5-75)||(54008479-54008549)
chr3 (5-94)||(331809-331897)
chr3 (45-94)||(10872682-10872731)
chr3 (173-222)||(41031532-41031581)
chr3 (45-94)||(50603594-50603643)
chr3 (6-94)||(21217176-21217264)
chr3 (6-90)||(25990691-25990774)
chr3 (6-94)||(27224590-27224678)
chr3 (5-65)||(30578261-30578321)
chr3 (5-72)||(18409261-18409328)
chr3 (153-207)||(1772225-1772279)
chr3 (40-94)||(20625249-20625303)
chr3 (173-219)||(26142866-26142912)
chr3 (32-94)||(37897750-37897812)
chr3 (20-94)||(48191725-48191799)
chr3 (173-219)||(54122325-54122370)
chr3 (12-94)||(54273409-54273491)
chr3 (5-90)||(13927436-13927520)
chr3 (5-94)||(41253941-41254030)
chr3 (5-94)||(41743600-41743689)
chr3 (5-94)||(42787657-42787745)
chr3 (5-61)||(23444316-23444372)
chr3 (5-93)||(23489325-23489413)
chr3 (5-73)||(35455594-35455662)
chr3 (5-93)||(36344384-36344472)
chr3 (5-65)||(40470459-40470519)
chr3 (34-94)||(40639865-40639925)
chr3 (5-65)||(44382851-44382911)
chr3 (32-92)||(51253682-51253742)
chr3 (153-208)||(2868514-2868569)
chr3 (39-94)||(22496961-22497016)
chr3 (6-73)||(36571417-36571483)
chr3 (39-94)||(40639784-40639839)
chr3 (173-208)||(43640677-43640712)
chr3 (173-208)||(46194318-46194353)
chr3 (32-94)||(24722697-24722759)
chr3 (39-93)||(29241555-29241609)
chr3 (173-207)||(36790986-36791020)
chr3 (43-93)||(40169079-40169129)
chr3 (32-94)||(45736697-45736759)
chr3 (173-219)||(49003230-49003276)
chr3 (32-94)||(52215948-52216010)
chr3 (5-75)||(54008236-54008306)
chr3 (173-207)||(55415552-55415586)
chr3 (5-94)||(7823908-7823997)
chr3 (174-207)||(9017760-9017793)
chr3 (27-72)||(12047277-12047322)
chr3 (5-94)||(12744942-12745031)
chr3 (173-218)||(15280565-15280610)
chr3 (173-222)||(36317697-36317745)
chr3 (5-90)||(40470432-40470517)
chr3 (173-206)||(51164912-51164945)
chr3 (173-206)||(54021571-54021604)
chr3 (6-94)||(611624-611711)
chr3 (39-75)||(1927530-1927566)
chr3 (173-209)||(3862282-3862318)
chr3 (31-75)||(29352795-29352839)
chr3 (45-93)||(34327589-34327637)
chr3 (5-73)||(37331640-37331708)
chr3 (5-73)||(38082545-38082613)
chr3 (159-219)||(39365118-39365178)
chr3 (172-200)||(39851918-39851946)
chr3 (5-65)||(52866456-52866516)
chr3 (159-219)||(54493855-54493914)
[»] scaffold0121 (2 HSPs)
scaffold0121 (5-90)||(17449-17533)
scaffold0121 (5-73)||(17475-17543)
[»] scaffold0321 (2 HSPs)
scaffold0321 (5-75)||(1662-1732)
scaffold0321 (173-219)||(9650-9696)
[»] scaffold0149 (1 HSPs)
scaffold0149 (32-94)||(24674-24736)
[»] scaffold0029 (1 HSPs)
scaffold0029 (5-94)||(15802-15891)
[»] scaffold0009 (1 HSPs)
scaffold0009 (5-94)||(145978-146067)
[»] scaffold0045 (1 HSPs)
scaffold0045 (159-219)||(26268-26328)
[»] scaffold0020 (1 HSPs)
scaffold0020 (175-207)||(171188-171220)
[»] scaffold0007 (1 HSPs)
scaffold0007 (173-219)||(230217-230262)
[»] scaffold1476 (1 HSPs)
scaffold1476 (46-94)||(741-789)
[»] scaffold0036 (1 HSPs)
scaffold0036 (5-73)||(36451-36519)


Alignment Details
Target: chr2 (Bit Score: 77; Significance: 7e-36; HSPs: 76)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 7650274 - 7650076
Alignment:
Q  20 gtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatagagtggtggaagggagtactctctta 119  Q
    |||||| | |||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||| |||  |||| | |||||||||||||||||     
T  7650274 gtatttggcctatattattgatcaaatacatcatttaatgaatgaacttaaaaagttgatttttgcttacaat--agtgatcgaagggagtactctcttc 7650177  T
Q  120 cttctataataacttggtcatttgc-nnnnnnngtgtcttaaaagaactgaactatttcacttttcaatataatattaattacttttttcattttataac 218  Q
    ||| |||||||||   |||||||||         | |||||||| |||||||  ||||||||||| |||| ||||||||||||||||||| |||||||||    
T  7650176 cttttataataacggagtcatttgcaaaaaaaaatatcttaaaataactgaatcatttcacttttaaatacaatattaattacttttttccttttataac 7650077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 2544450 - 2544361
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||| |||||| |||||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||||||||||    
T  2544450 cattcattaaatgatgtatttggtctatattattgaccaaataagtcatttaatgaatgaatctaaaaaattaatttttgtttataatag 2544361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 2544392 - 2544481
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||||||||||  ||||| ||| ||| ||| |||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||    
T  2544392 cattcattaaatgacttatttggtcaataatatagaccaaatacatcatttaatgaatgaacctaaaaagttgatttttgtttatgatag 2544481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 19268136 - 19268073
Alignment:
Q  28 tctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataa 91  Q
    |||||||||||||| |||||||||||||| |||||||||||||||| |||||||||| ||||||    
T  19268136 tctatattattgactaaatacatcatttattgaatgaacttaaaaagttgatttttgcttataa 19268073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 5559528 - 5559450
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgattttt 83  Q
    |||||||||||| | ||||||||||||| |||||||| ||||||| |||||||| ||||||  ||||||||||||||||    
T  5559528 cattcattaaattatgtatttagtctatgttattgacaaaatacaacatttaataaatgaatctaaaaaattgattttt 5559450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 31024270 - 31024181
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||| |||| | |||| |||||| ||||| |||||||||||||||||||||  |||||  |||||||||| |||||||||    
T  31024270 cattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatag 31024181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 152 - 219
Target Start/End: Original strand, 28526903 - 28526970
Alignment:
Q  152 gtgtcttaaaagaactgaactatttcacttttcaatataatattaattacttttttcattttataact 219  Q
    ||||| ||||| |||||||  ||||||||||||||||||||||||||||||||||||  |||||||||    
T  28526903 gtgtcataaaataactgaatcatttcacttttcaatataatattaattacttttttctctttataact 28526970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 23143534 - 23143616
Alignment:
Q  12 taaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||| ||||||  |||| ||||| |||||||||||||||||| ||||| ||| |||||| |||||||||| |||||||||    
T  23143534 taaatgatgtatttgatctacattatggaccaaatacatcatttattgaataaacctaaaaagttgatttttgcttataatag 23143616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 23555324 - 23555406
Alignment:
Q  12 taaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||| ||||||  |||| ||||| |||||||||||||||||| ||||| ||| |||||| |||||||||| |||||||||    
T  23555324 taaatgatgtatttgatctacattatggaccaaatacatcatttattgaataaacctaaaaagttgatttttgcttataatag 23555406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 35498220 - 35498136
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttata 90  Q
    |||||| ||||||| |||||| |||||| |||||||  |||||||||||||| ||||||||  |||| ||||||||||||||||||    
T  35498220 cattcaataaatgatgtatttggtctat-ttattgattaaatacatcatttattgaatgaatctaaataattgatttttgtttata 35498136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 6648162 - 6648216
Alignment:
Q  39 gaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    ||||| || ||||||||||||||||||| ||||| ||||||||||||||||||||    
T  6648162 gaccacatgcatcatttaatgaatgaacataaaatattgatttttgtttataata 6648216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 25270897 - 25270986
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||| |||| |||||| ||||||  |||  |||||||||||||||||||||  |||||  | |||||||| |||||||||    
T  25270897 cattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatctaaaatgtagatttttgcttataatag 25270986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 33129173 - 33129084
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||| | ||| ||||||| |||||| ||| | ||| || ||||||||||||||| ||||| ||||||||||  |||||||||    
T  33129173 cattcattaaataatgtaattagtctttattatagactacatatattatttaatgaatgaacctaaaatattgatttttacttataatag 33129084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 33618295 - 33618226
Alignment:
Q  6 attcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaat 75  Q
    ||||||| ||||| |||| |||||||||||||  |||| |||||||||| ||||||||||| ||||||||    
T  33618295 attcatttaatgatgtatgtagtctatattatgaaccatatacatcattaaatgaatgaacctaaaaaat 33618226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 41056929 - 41057018
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||| |||| |||||| ||||||  |||  |||||||||||||||||||||  |||||  | |||||||| |||||||||    
T  41056929 cattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatctaaaatgtagatttttgcttataatag 41057018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 1961359 - 1961439
Alignment:
Q  14 aatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||| |||| | |||| |||||| ||||| |||||||||||||||||||||  |||||  |||||||||| |||||||||    
T  1961359 aatgatgtatatggtctttattatagaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatag 1961439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 15119875 - 15119787
Alignment:
Q  6 attcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||| ||||| |||| | |||| |||||| ||||| |||||||||||||||||||||  |||||  || ||||||| |||||||||    
T  15119875 attcatttaatgatgtatattgtctttattatagaccacatacatcatttaatgaatgaatctaaaatgttaatttttgcttataatag 15119787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 38181859 - 38181771
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    |||||| | ||||| |||| |||||| |||| | || || |||||||||||||||||||||  ||||| ||||||||||| ||||||||    
T  38181859 cattcaattaatgatgtatatagtctttattgtagatcacatacatcatttaatgaatgaatctaaaatattgatttttgcttataata 38181771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 42881438 - 42881378
Alignment:
Q  159 aaaagaactgaactatttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||| |||||||  |||||||||||||||| ||||||||||||||||||| ||||| ||||    
T  42881438 aaaataactgaatcatttcacttttcaatacaatattaattacttttttccttttacaact 42881378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 26003494 - 26003447
Alignment:
Q  45 atacatcatttaatgaatgaacttaaaaaattgatttttgtttataat 92  Q
    |||||||||||||||||||||| ||||| ||||||||||| |||||||    
T  26003494 atacatcatttaatgaatgaacctaaaatattgatttttgcttataat 26003447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 37182857 - 37182924
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaa 72  Q
    |||| ||||||||| |||| ||| || |||||| ||||| ||||||||||||||||||||| ||||||    
T  37182857 cattaattaaatgatgtatatagcctttattatagaccacatacatcatttaatgaatgaatttaaaa 37182924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 7213435 - 7213481
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||||| ||||||||||||||||| | ||||||||||    
T  7213435 atttcacttttcaatacaatattaattactttttcccttttataact 7213481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 11093614 - 11093540
Alignment:
Q  20 gtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||| |||||| |||||| ||||| |||||||||||||||||| ||  ||||| ||||||||||  |||||||||    
T  11093614 gtatatagtctttattatagaccacatacatcatttaatgaatcaatctaaaatattgatttttacttataatag 11093540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 15859489 - 15859443
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||||| |||||||||||||||||||  |||||||||    
T  15859489 atttcacttttcaatacaatattaattacttttttccctttataact 15859443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 33129115 - 33129201
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataa 91  Q
    |||||||||||| |  ||| ||||||||| ||  ||| || ||||| ||||||||||||||||||||| ||||| ||||| ||||||    
T  33129115 cattcattaaataatatatgtagtctataataaagactaattacattatttaatgaatgaacttaaaatattgagttttgcttataa 33129201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 41436039 - 41436085
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||||| ||||||||||||||||| | ||||||||||    
T  41436039 atttcacttttcaatacaatattaattactttttcccttttataact 41436085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 44194596 - 44194657
Alignment:
Q  157 ttaaaagaactgaactatttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||| |||||||  |||||||||||||||| ||||||||||| ||||||| ||||||||||    
T  44194596 ttaaaataactgaatcatttcacttttcaatacaatattaatta-ttttttccttttataact 44194657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 435239 - 435186
Alignment:
Q  165 actgaactatttcacttttcaatataatattaattacttttttcattttataac 218  Q
    |||||||||||||||||||||||| ||||||||||| || ||||  ||||||||    
T  435239 actgaactatttcacttttcaatacaatattaattatttctttccctttataac 435186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 3098167 - 3098256
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||| ||||||||| |||| |||||| ||||||  |||  |||||||||||||||||||||  |||||  | |||||||| |||||||||    
T  3098167 catttattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatctaaaatgtagatttttgcttataatag 3098256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 5212120 - 5212071
Alignment:
Q  158 taaaagaactgaactatttcacttttcaatataatattaattactttttt 207  Q
    ||||| ||||||  ||||||||||||||||| ||||||||||||||||||    
T  5212120 taaaataactgagttatttcacttttcaatacaatattaattactttttt 5212071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 22352484 - 22352568
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttata 90  Q
    |||||||| ||||| |||| | |||||||||||  |||| |||||||||| ||||||||||| | ||||| ||| |||||||||||    
T  22352484 cattcatttaatgatgtatgtggtctatattatgaaccacatacatcattaaatgaatgaacct-aaaaagtgaattttgtttata 22352568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 38465888 - 38465799
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| | ||||| |||| | |||| |||||| ||||| |||||||||||||||||| ||  |||||  |||||||||| |||||||||    
T  38465888 cattcaattaatgatgtatatggtctttattatggaccacatacatcatttaatgaattaatctaaaatgttgatttttgcttataatag 38465799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 38871519 - 38871454
Alignment:
Q  29 ctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||||| |||||||||||||||||| | ||| || ||| ||||||| |||||| |||||||||    
T  38871519 ctatattatagaccaaatacatcatttattcaataaatttagaaaattgttttttgcttataatag 38871454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 3100339 - 3100395
Alignment:
Q  152 gtgtcttaaaagaactgaactatttcacttttcaatataatattaattacttttttc 208  Q
    |||||| |||| ||||||   |||||||||||||||| |||||||||||||||||||    
T  3100339 gtgtctcaaaataactgagtcatttcacttttcaatacaatattaattacttttttc 3100395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 14952806 - 14952874
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||| ||||||| | || |||||||||| || || || ||||||||||||||||||||||| |||||    
T  14952806 cattcaataaatgatgcatgtagtctatataatagatcacatacatcatttaatgaatgaactaaaaaa 14952874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 15080879 - 15080947
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | |||||||||||  |||| |||||||||| ||||||||||| ||||||    
T  15080879 cattcatttaatgatgtatgtggtctatattatgaaccacatacatcattaaatgaatgaacctaaaaa 15080947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 23143584 - 23143496
Alignment:
Q  6 attcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||| ||||||| |||||| ||| ||| | | || ||||||||||||||| | | ||||| |||||| |||||||||| |||||||||    
T  23143584 attcaataaatgatgtatttggtccataatgtagatcaaatacatcatttattaagtgaacctaaaaagttgatttttgcttataatag 23143496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 23555374 - 23555286
Alignment:
Q  6 attcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||| ||||||| |||||| ||| ||| | | || ||||||||||||||| | | ||||| |||||| |||||||||| |||||||||    
T  23555374 attcaataaatgatgtatttggtccataatgtagatcaaatacatcatttattaagtgaacctaaaaagttgatttttgcttataatag 23555286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 43950600 - 43950537
Alignment:
Q  158 taaaagaactgaactatttcacttttcaatataatattaattacttttttcattttataacttta 222  Q
    ||||| ||||||  |||||||||||||||| |||||||||||| ||||||||  |||||||||||    
T  43950600 taaaataactgacttatttcacttttcaatgtaatattaattatttttttca-attataacttta 43950537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 44402125 - 44402193
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | |||||||||||  |||| |||||||||| ||||||||||| ||||||    
T  44402125 cattcatttaatgatgtatgtggtctatattatgaaccacatacatcattaaatgaatgaacctaaaaa 44402193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 44949441 - 44949373
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | ||| |||||||| |||| |||||||||| ||||||||||| ||||||    
T  44949441 cattcatttaatgatgtatgtggtccatattattaaccacatacatcattaaatgaatgaacctaaaaa 44949373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 4043301 - 4043367
Alignment:
Q  155 tcttaaaagaactgaactatttcacttttcaatataatattaattacttttttcattttataacttta 222  Q
    |||||||| || |||  ||||| |||||||||||||||||||||||||||| |||  |||||||||||    
T  4043301 tcttaaaaaaattgatgtattttacttttcaatataatattaattacttttctca-attataacttta 4043367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 8266374 - 8266323
Alignment:
Q  43 aaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||| ||||||||||||||||||| |||||  |||||| ||||||||||    
T  8266374 aaatacaacatttaatgaatgaacttagaaaatgaatttttatttataatag 8266323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 32630504 - 32630417
Alignment:
Q  6 attcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    ||||||||||||| |||| ||||||||| ||  ||||| |||||||||| | ||||||||   ||||  | |||||||||||||||||    
T  32630504 attcattaaatgatgtatgtagtctataataaagaccatatacatcattaattgaatgaatccaaaatgtagatttttgtttataata 32630417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 35498163 - 35498241
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaa-cttaaaaaattgattttt 83  Q
    |||||| ||||||| ||||||| || |||  || |||||||||||||||||| |||||||| || |||||||||||||||    
T  35498163 cattcaataaatgatgtatttaatcaataa-atagaccaaatacatcatttattgaatgaacctaaaaaaattgattttt 35498241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 207
Target Start/End: Original strand, 2427323 - 2427353
Alignment:
Q  177 cacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||||||||||||||||||    
T  2427323 cacttttcaatataatattaattactttttt 2427353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 5559470 - 5559556
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataa 91  Q
    |||| ||||||||  |||||| ||| |||  || ||| |||||||| ||||||||||||||  |||||| |||||||||| ||||||    
T  5559470 catttattaaatgttgtattttgtcaataacatagactaaatacataatttaatgaatgaatataaaaagttgatttttgcttataa 5559556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 6972691 - 6972657
Alignment:
Q  173 atttcacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||| ||||||||||||||||||    
T  6972691 atttcacttttcaatacaatattaattactttttt 6972657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 8385035 - 8385084
Alignment:
Q  172 tatttcacttttcaatataatattaattacttttttcattttataacttta 222  Q
    ||||||||||||||||| |||||||||||| |||||||  |||||||||||    
T  8385035 tatttcacttttcaatacaatattaattacatttttca-attataacttta 8385084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 9724841 - 9724875
Alignment:
Q  173 atttcacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||| ||||||||||||||||||    
T  9724841 atttcacttttcaatacaatattaattactttttt 9724875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 18181381 - 18181327
Alignment:
Q  153 tgtcttaaaagaactgaactatttcacttttcaatataatattaattactttttt 207  Q
    |||| ||||| |||||| | |||||||||||||||| ||||||||||| ||||||    
T  18181381 tgtcctaaaataactgacccatttcacttttcaatacaatattaattattttttt 18181327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 19009805 - 19009839
Alignment:
Q  173 atttcacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||| ||||||||||||||||||    
T  19009805 atttcacttttcaatacaatattaattactttttt 19009839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 21183388 - 21183454
Alignment:
Q  25 tagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataa 91  Q
    |||||| |||| | ||||| |||||||||||||||||||||  |||||  |||||||||| ||||||    
T  21183388 tagtctttattgtagaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataa 21183454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 28925995 - 28925949
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||| ||||||||| |||||||||||||||||||  |||||||||    
T  28925995 atttcatttttcaatacaatattaattacttttttccctttataact 28925949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 30757711 - 30757669
Alignment:
Q  177 cacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||| ||||||||||||||||||  ||||||||||    
T  30757711 cacttttcaatacaatattaattactttttttcttttataact 30757669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 200
Target Start/End: Complemental strand, 33602394 - 33602352
Alignment:
Q  158 taaaagaactgaactatttcacttttcaatataatattaatta 200  Q
    ||||| |||||| |||||||||||||||||| |||||||||||    
T  33602394 taaaataactgatctatttcacttttcaatacaatattaatta 33602352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 43077872 - 43077827
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||||| ||||||||||| ||||||| ||||||||||    
T  43077872 atttcacttttcaatacaatattaatta-ttttttccttttataact 43077827  T

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Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 44949383 - 44949453
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaat 75  Q
    |||||||| ||||| |||| | ||  ||| ||| ||||| |||||||||| ||||||||||||||||||||    
T  44949383 cattcatttaatgatgtatgtggttaataatatggaccacatacatcattaaatgaatgaacttaaaaaat 44949453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 85751 - 85812
Alignment:
Q  31 atattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataat 92  Q
    |||||||| |||| |||||||||| | ||||||||| ||||||| | | |||||||||||||    
T  85751 atattattaaccacatacatcattaattgaatgaacctaaaaaaatcaattttgtttataat 85812  T

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Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 7079441 - 7079380
Alignment:
Q  33 attattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||| ||||| ||| ||||||||||| ||||| ||||||  |||||||||| |||||||||    
T  7079441 attatagaccacatatatcatttaatggatgaatttaaaatgttgatttttgcttataatag 7079380  T

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Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 11726536 - 11726625
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| | ||||| |||| || ||| |||||| || || |||||||||||||||||||||  |||||  || ||||||| |||||||||    
T  11726536 cattcaatcaatgatgtatataatctttattatggatcacatacatcatttaatgaatgaatctaaaatgttaatttttgcttataatag 11726625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 13333488 - 13333577
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||| |||| |||| | ||||||  |||  |||||||||||||| ||||||  |||||  | |||||||| |||||||||    
T  13333488 cattcattaaatgatgtatgtagtttgtattataaaccgcatacatcatttaatcaatgaatctaaaatgtagatttttgcttataatag 13333577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 19951526 - 19951575
Alignment:
Q  45 atacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||| | ||||||||  ||||| |||||||||||||||||||||    
T  19951526 atacatcattaattgaatgaatataaaatattgatttttgtttataatag 19951575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 29819849 - 29819784
Alignment:
Q  25 tagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttata 90  Q
    |||||| |||||| ||||| |||||||||| ||| |||||||||||||  | | ||||||||||||    
T  29819849 tagtctttattatagaccacatacatcattaaataaatgaacttaaaatgtagttttttgtttata 29819784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 32630447 - 32630536
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| | ||||| |||| | |||| |||||| ||| | |||||||||||||||||| ||  |||||  ||||||||| ||||||||||    
T  32630447 cattcaattaatgatgtatatggtctttattatagactacatacatcatttaatgaataaatctaaaatgttgatttttatttataatag 32630536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 41056947 - 41056898
Alignment:
Q  45 atacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||||||||||||||| |  ||||| ||||||||||| |||||||||    
T  41056947 atacatcatttaatgaatgtatctaaaacattgatttttgcttataatag 41056898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 206
Target Start/End: Complemental strand, 44534634 - 44534601
Alignment:
Q  173 atttcacttttcaatataatattaattacttttt 206  Q
    |||||||||||||||| |||||||||||||||||    
T  44534634 atttcacttttcaatacaatattaattacttttt 44534601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 596077 - 596157
Alignment:
Q  14 aatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||| |||| || ||| |||||| || || |||||| ||||||| |||||| || |||  ||||||||||||||||||||    
T  596077 aatgatgtatataatctttattatagatcatatacattatttaataaatgaatttgaaatgttgatttttgtttataatag 596157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 5094939 - 5094871
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | ||| |||||||  |||| |||||||||| ||||||||||| ||||||    
T  5094939 cattcatttaatgatgtatgtggtccatattatgaaccatatacatcattaaatgaatgaacctaaaaa 5094871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 14136727 - 14136759
Alignment:
Q  176 tcacttttcaatataatattaattacttttttc 208  Q
    ||||||||||||| |||||||||||||||||||    
T  14136727 tcacttttcaatacaatattaattacttttttc 14136759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 15916792 - 15916744
Alignment:
Q  45 atacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    |||||| ||||||||||||||  ||||| ||||||||||| ||||||||    
T  15916792 atacattatttaatgaatgaatctaaaatattgatttttgcttataata 15916744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 28602188 - 28602256
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | ||| |||||||  |||| ||| |||||| ||||||||||||||||||    
T  28602188 cattcattgaatgatgtatgtggtccatattatgaaccacatatatcattaaatgaatgaacttaaaaa 28602256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 34235018 - 34235058
Alignment:
Q  182 ttcaatataatattaattacttttttcattttataacttta 222  Q
    ||||||||||||||||||||||||||   ||||||||||||    
T  34235018 ttcaatataatattaattactttttttcatttataacttta 34235058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 41805315 - 41805375
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaa 65  Q
    |||||| | ||||| |||| |||||| |||||| ||||| |||||||||||||||| ||||    
T  41805315 cattcaattaatgatgtatatagtctttattatagaccatatacatcatttaatgagtgaa 41805375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 42230563 - 42230631
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | || |||| ||| ||||| |||||||||| ||||||||||| ||||||    
T  42230563 cattcatttaatgatgtatgtggtttataatatggaccacatacatcattaaatgaatgaacataaaaa 42230631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 43514855 - 43514787
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||| | ||||| |||| | |||||||||||  |||| |||||||||| | ||||||||||||||||    
T  43514855 cattcaattaatgatgtatatggtctatattatgaaccacatacatcattaattgaatgaacttaaaaa 43514787  T

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Target: chr8 (Bit Score: 73; Significance: 2e-33; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 17871862 - 17871774
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||    
T  17871862 cattcattaaatgatgtatttagtctatattattgaccaaatacatcatttaatgaatgaacctaaaaagttgatttttgcttataata 17871774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 17986293 - 17986205
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||  ||||||||    
T  17986293 cattcattaaatgatgtatttagtctatgttattgaccaaatacatcatttaatgaatgaacttataaagttgatttttacttataata 17986205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 17871804 - 17871893
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||| |||||| ||| ||| ||| ||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  17871804 cattcattaaatgatgtatttggtcaataatatagactaaatacatcatttaatgaatgaacctaaaaaattgatttttgcttataatag 17871893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 6189733 - 6189651
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgttt 87  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||| |  |||||| |||||| |||||||||||||    
T  6189733 cattcaataaatgatgtatttagtctatattattgaccaaatacatcatttattcgatgaacctaaaaagttgatttttgttt 6189651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 17986235 - 17986324
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||| |||||| ||| |||  || ||| |||||||||||||||||||||||| |||||| |||||||||  |||||||||    
T  17986235 cattcattaaatgatgtatttggtcaataacatagactaaatacatcatttaatgaatgaacctaaaaagttgatttttacttataatag 17986324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 7484658 - 7484746
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    |||||||||||||| |||| | |||| |||||| ||||| |||||||||||||||||||||  |||||  |||||||||| ||||||||    
T  7484658 cattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataata 7484746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 26998763 - 26998679
Alignment:
Q  10 attaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||||| |||||| ||| ||| | | |||||||||||||||||||| ||| ||| ||||||||| |||||||||||||||||    
T  26998763 attaaatgatgtatttggtcaataatgtagaccaaatacatcatttaataaataaacctaaaaaattaatttttgtttataatag 26998679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 26998715 - 26998798
Alignment:
Q  10 attaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    ||||||||| |||||| ||||| |||||||||||||||||||||||||| ||| || ||||||| || ||||||  ||||||||    
T  26998715 attaaatgatgtatttggtctacattattgaccaaatacatcatttaataaataaatttaaaaagttaatttttacttataata 26998798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 2627273 - 2627213
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaa 65  Q
    |||||| ||||||  ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  2627273 cattcaataaatggtgtatttagtctatattattgaccaaatacattatttattgaatgaa 2627213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 39171503 - 39171549
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||    
T  39171503 atttaacttttcaatataatattaattacttttttctttttataact 39171549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 3225848 - 3225909
Alignment:
Q  32 tattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    |||||| ||||| ||||||||||||||||||||||  |||| ||||||||||| ||||||||    
T  3225848 tattatagaccacatacatcatttaatgaatgaaccaaaaatattgatttttgcttataata 3225909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 6189682 - 6189763
Alignment:
Q  12 taaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    ||||||| |||||| ||| ||| ||| ||| |||||||||||||| ||||||||  |||||  |||||||||||||||||||    
T  6189682 taaatgatgtatttggtcaataatatagactaaatacatcatttattgaatgaatctaaaacgttgatttttgtttataata 6189763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 10934653 - 10934733
Alignment:
Q  14 aatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||| |||| |||||| |||| | ||||| |||||||||||||||||||||  |||||  |||||||||| |||||||||    
T  10934653 aatgatgtatgtagtctttattgtagaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatag 10934733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 37288618 - 37288578
Alignment:
Q  43 aaatacatcatttaatgaatgaacttaaaaaattgattttt 83  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  37288618 aaatacatcatttaatgaatgaacctaaaaaattgattttt 37288578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 13964496 - 13964429
Alignment:
Q  27 gtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||| ||| ||||| |||||||||||| |||||||| ||||||  |||||||||| |||||||||    
T  13964496 gtctataatatagaccacatacatcatttattgaatgaatttaaaatgttgatttttgcttataatag 13964429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 31271630 - 31271543
Alignment:
Q  6 attcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    ||||| ||| ||| ||||||||||| ||||||||| ||| ||||||||||| ||| ||||| | ||||||| ||||||  ||||||||    
T  31271630 attcaataagtgatgtatttagtctgtattattgatcaactacatcatttattgattgaacctgaaaaattaatttttacttataata 31271543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 32241572 - 32241525
Alignment:
Q  172 tatttcacttttcaatataatattaattacttttttcattttataact 219  Q
    ||||||||||||||||| |||||||||||||||||||  |||||||||    
T  32241572 tatttcacttttcaatacaatattaattacttttttccctttataact 32241525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 41753835 - 41753768
Alignment:
Q  27 gtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||| |||||| ||||| ||||||||||||||||||||| ||||||  |||| ||||| |||||||||    
T  41753835 gtctgtattatagaccacatacatcatttaatgaatgaatttaaaatgttgaattttgcttataatag 41753768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 9678801 - 9678863
Alignment:
Q  20 gtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttt 82  Q
    |||||| |||||||||||| ||||||||||| ||||| | ||||||| ||||||||| |||||    
T  9678801 gtatttggtctatattattcaccaaatacataatttattcaatgaacataaaaaattaatttt 9678863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 33191056 - 33191010
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||||| |||||||||||||||||||  |||||||||    
T  33191056 atttcacttttcaatacaatattaattacttttttccctttataact 33191010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 42666216 - 42666146
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaat 75  Q
    |||||||| ||||| |||| | |||||||||||  |||| |||||||||| ||||||||||| ||||||||    
T  42666216 cattcatttaatgatgtatgtggtctatattatgaaccacatacatcattaaatgaatgaacctaaaaaat 42666146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 8793815 - 8793762
Alignment:
Q  12 taaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaa 65  Q
    ||||||| |||||||||||||||||| |||||||||||||| ||| | ||||||    
T  8793815 taaatgatgtatttagtctatattatagaccaaatacatcaattactcaatgaa 8793762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 11295705 - 11295790
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttata 90  Q
    |||||||||||||| |||| | |||| ||||||  |||| || ||||||||||||||||||  |||||  || |||||||||||||    
T  11295705 cattcattaaatgatgtatgtggtctttattataaaccacatgcatcatttaatgaatgaatctaaaatgttaatttttgtttata 11295790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 2627215 - 2627303
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    |||||| ||||| | |||||| ||| ||| ||| ||| ||||||| |||||| |||||||||||||||| || ||||||| | ||||||    
T  2627215 cattcaataaataatgtatttggtcaataatatagactaaatacaccatttattgaatgaacttaaaaagttaatttttgctaataata 2627303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 2827455 - 2827387
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | || ||||||||  |||| |||||||||| ||||||||||||||||||    
T  2827455 cattcatttaatgatgtatgtggtttatattatgaaccacatacatcattaaatgaatgaacttaaaaa 2827387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 15037809 - 15037761
Alignment:
Q  45 atacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    |||||||||||| ||||||||| |||||| | |||||||||||||||||    
T  15037809 atacatcatttattgaatgaacctaaaaagtagatttttgtttataata 15037761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 24418979 - 24418912
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||| ||||||| |||| | |||||||| || ||||| |||||||||||| ||||||||||||||||    
T  24418979 cattcaataaatgatgtatgtcgtctatat-atagaccacatacatcatttattgaatgaacttaaaaa 24418912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 37288598 - 37288658
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaa 65  Q
    |||||||||||||| |||||| |||||| |||||||||||||| |  |||| |||||||||    
T  37288598 cattcattaaatgatgtatttcgtctatgttattgaccaaataaaatattttatgaatgaa 37288658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 38252599 - 38252539
Alignment:
Q  159 aaaagaactgaactatttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||| |||||||| |||||||||||  ||| |||||||||||||||||||  |||||||||    
T  38252599 aaaataactgaaccatttcactttttgatacaatattaattacttttttccctttataact 38252539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 38815902 - 38815834
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||  ||||| |||| ||||| |||||||  ||||||||||||||| ||||||||||| ||||||    
T  38815902 cattcatataatgatgtatgtagtccatattatgaaccaaatacatcattaaatgaatgaacctaaaaa 38815834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 5391987 - 5392042
Alignment:
Q  152 gtgtcttaaaagaactgaactatttcacttttcaatataatattaattactttttt 207  Q
    |||||| |||| ||||||   |||||||||||||||| ||||||||||||||||||    
T  5391987 gtgtctcaaaataactgagtcatttcacttttcaatacaatattaattactttttt 5392042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 208
Target Start/End: Original strand, 14689920 - 14689955
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttc 208  Q
    |||||||||||||||| |||||||||||||||||||    
T  14689920 atttcacttttcaatacaatattaattacttttttc 14689955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 208
Target Start/End: Complemental strand, 25174732 - 25174697
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttc 208  Q
    ||||||||||||||||||||||||||||| ||||||    
T  25174732 atttcacttttcaatataatattaattacatttttc 25174697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 208
Target Start/End: Original strand, 27571455 - 27571490
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttc 208  Q
    ||||||||||||||||||||||||||||| ||||||    
T  27571455 atttcacttttcaatataatattaattacctttttc 27571490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 222
Target Start/End: Original strand, 29615744 - 29615807
Alignment:
Q  159 aaaagaactgaactatttcacttttcaatataatattaattacttttttcattttataacttta 222  Q
    |||| |||||||  |||| ||||||||||| ||||||||||| |||||||  ||||||||||||    
T  29615744 aaaataactgaatcattttacttttcaatacaatattaattatttttttccctttataacttta 29615807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 208
Target Start/End: Complemental strand, 32231867 - 32231832
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttc 208  Q
    |||||||||||||||| |||||||||||||||||||    
T  32231867 atttcacttttcaatacaatattaattacttttttc 32231832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 208
Target Start/End: Complemental strand, 45421087 - 45421052
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttc 208  Q
    |||||||||||||||| |||||||||||||||||||    
T  45421087 atttcacttttcaatacaatattaattacttttttc 45421052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 886595 - 886561
Alignment:
Q  173 atttcacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||| ||||||||||||||||||    
T  886595 atttcacttttcaatacaatattaattactttttt 886561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 3384491 - 3384540
Alignment:
Q  172 tatttcacttttcaatataatattaattacttttttcattttataacttta 222  Q
    |||||||||||| |||| ||||||||||||||||||||  |||||||||||    
T  3384491 tatttcactttttaatacaatattaattacttttttca-attataacttta 3384540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 22325102 - 22325056
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||||| ||||||||||| |||||||  |||||||||    
T  22325102 atttcacttttcaatacaatattaattatttttttctctttataact 22325056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 24052904 - 24052958
Alignment:
Q  40 accaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||| |||||||||||| | ||||||| |||||| | ||||||||||||||||||    
T  24052904 accatatacatcatttattcaatgaacctaaaaagtagatttttgtttataatag 24052958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 41726481 - 41726515
Alignment:
Q  173 atttcacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||| ||||||||||||||||||    
T  41726481 atttcacttttcaatacaatattaattactttttt 41726515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 65
Target Start/End: Complemental strand, 2382658 - 2382625
Alignment:
Q  32 tattattgaccaaatacatcatttaatgaatgaa 65  Q
    |||||| |||||||||||||||||||||||||||    
T  2382658 tattatagaccaaatacatcatttaatgaatgaa 2382625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 5888435 - 5888346
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| | ||||| |||| | |||| |||||| ||| | |||||||||||||||||||||  |||||  || ||||||| |||||||||    
T  5888435 cattcaattaatgatgtatatggtctttattatagacaacatacatcatttaatgaatgaatctaaaacgttaatttttgcttataatag 5888346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 5888377 - 5888466
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||| |||| | ||||||| ||  ||||| |||||||||| | ||||||||  || ||| | |||||||| |||||||||    
T  5888377 cattcattaaatgatgtatgttgtctataataaagaccatatacatcattaattgaatgaatctacaaagtagatttttgcttataatag 5888466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 9331330 - 9331391
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaac 66  Q
    |||||||| ||||| |||| | ||| |||||||| |||| |||||||||| |||||||||||    
T  9331330 cattcatttaatgatgtatgttgtccatattattaaccatatacatcattaaatgaatgaac 9331391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 10335210 - 10335271
Alignment:
Q  32 tattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    |||||| |||||  || |||||||||| ||||||  ||||| ||||||||||||||||||||    
T  10335210 tattatagaccacctatatcatttaataaatgaatctaaaatattgatttttgtttataata 10335271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 11295763 - 11295674
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||| | || | || |||| ||  ||||| ||||||||||||||||||| |  |||||  |||||||||| |||||||||    
T  11295763 cattcattaaatgatgcatgtggtttataataaagaccacatacatcatttaatgaatgtatctaaaatgttgatttttgcttataatag 11295674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 208
Target Start/End: Complemental strand, 12958331 - 12958294
Alignment:
Q  171 ctatttcacttttcaatataatattaattacttttttc 208  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  12958331 ctatttcactttttaatacaatattaattacttttttc 12958294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 13841946 - 13841858
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| ||||||| |||| |||| |||||  | ||| |||||||||||||| |||||||| ||||||| |  ||||||| |||||||||    
T  13841946 cattcaataaatgatgtatgtagtttatatg-tagactaaatacatcatttattgaatgaatttaaaaagtaaatttttgcttataatag 13841858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 27502960 - 27502911
Alignment:
Q  45 atacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||||||||||||||||| ||||||  || ||||||| |||||||||    
T  27502960 atacatcatttaatgaatgaatttaaaatgttaatttttgcttataatag 27502911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 31410755 - 31410706
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataacttta 222  Q
    |||||||||| ||||| ||||||||||||||||| | || ||||||||||    
T  31410755 atttcactttccaatacaatattaattactttttcccttctataacttta 31410706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 36308090 - 36308002
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| ||||||| ||||  ||||||||| ||  |||| |||||||||||| ||||||||| ||||||||  | |||| ||||||||||    
T  36308090 cattcaataaatgatgtatgcagtctatat-atgaaccacatacatcatttattgaatgaacctaaaaaatcaacttttatttataatag 36308002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 45045438 - 45045507
Alignment:
Q  25 tagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||||| ||  ||||| |||||||||| | ||||||||  ||||| || ||||||||||||||||||    
T  45045438 tagtctataataaagaccatatacatcattaattgaatgaatctaaaatatagatttttgtttataatag 45045507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 45145644 - 45145713
Alignment:
Q  6 attcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaat 75  Q
    ||||||| ||||| |||| | |||||||||||  |||| |||||||||| ||| ||||||| ||||||||    
T  45145644 attcatttaatgatgtatgtggtctatattatgaaccacatacatcattaaattaatgaacctaaaaaat 45145713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 5420260 - 5420216
Alignment:
Q  31 atattattgaccaaatacatcatttaatgaatgaacttaaaaaat 75  Q
    ||||||| ||||| |||||||||| ||||||||||| ||||||||    
T  5420260 atattatagaccatatacatcattaaatgaatgaacctaaaaaat 5420216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 9879014 - 9878954
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaa 65  Q
    |||||||||||| | |||| |||||| |||||| ||| | |||||| ||||||||||||||    
T  9879014 cattcattaaataacgtatgtagtctttattatagactacatacataatttaatgaatgaa 9878954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 13080129 - 13080217
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    |||||||||||||| |||| |||||| || ||  ||||| |||||||||| | | ||||||  |||||  | |||||||||||||||||    
T  13080129 cattcattaaatgatgtatgtagtctttaataaagaccacatacatcattaattcaatgaatgtaaaatgtagatttttgtttataata 13080217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 26570324 - 26570272
Alignment:
Q  155 tcttaaaagaactgaactatttcacttttcaatataatattaattactttttt 207  Q
    |||||||| ||||||   |||||||||||||||| ||||||||||||| ||||    
T  26570324 tcttaaaataactgattcatttcacttttcaatacaatattaattactatttt 26570272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 33070206 - 33070266
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaa 65  Q
    |||||||||||||| |||| ||||||||| ||  ||||| ||||| |||| ||||||||||    
T  33070206 cattcattaaatgatgtatgtagtctataataaagaccatatacaccattaaatgaatgaa 33070266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 33925221 - 33925185
Alignment:
Q  183 tcaatataatattaattacttttttcattttataact 219  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  33925221 tcaatacaatattaattacttttttccttttataact 33925185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 36308613 - 36308545
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||| ||| ||||| |||| | || |||| ||| ||||| |||||||||||||||||| ||||||||||    
T  36308613 catttatttaatgatgtatgtggtttataatatggaccacatacatcatttaatgaataaacttaaaaa 36308545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 36314957 - 36314889
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | |||||||||||  |||| |||||||||| ||||||| ||| ||||||    
T  36314957 cattcatttaatgatgtatgtggtctatattatgaaccacatacatcattaaatgaattaacctaaaaa 36314889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 40305053 - 40305121
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | || ||||||||  |||| |||||||||| ||||||||||| ||||||    
T  40305053 cattcatttaatgatgtatgtggtgtatattataaaccacatacatcattaaatgaatgaacctaaaaa 40305121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 43295929 - 43295997
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||| | ||||| |||| | ||| ||||||| ||||| |||||||||||| |||||||| |||||||    
T  43295929 cattcaatgaatgatgtatgtggtccatattatagaccacatacatcatttattgaatgaatttaaaaa 43295997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 205
Target Start/End: Original strand, 45197571 - 45197603
Alignment:
Q  173 atttcacttttcaatataatattaattactttt 205  Q
    |||||||||||||||| ||||||||||||||||    
T  45197571 atttcacttttcaatacaatattaattactttt 45197603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 45441143 - 45441203
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaa 65  Q
    |||||||| ||||| |||| | |||||||||||  |||| |||||||||| ||||||||||    
T  45441143 cattcatttaatgatgtatgtggtctatattatgaaccacatacatcattaaatgaatgaa 45441203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 6e-27; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 28752120 - 28752209
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||  ||||||||| ||||||| |||||||||    
T  28752120 cattcattaaatgatgtatttggtctatattattgaccaaatatatcatttaatgaatgaatgtaaaaaattaatttttgcttataatag 28752209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 28752178 - 28752090
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    ||||||||||||||  ||||| ||| ||| ||| ||||||||||||||||||||||||||| ||||||| || | ||||| ||||||||    
T  28752178 cattcattaaatgatatatttggtcaataatatagaccaaatacatcatttaatgaatgaaattaaaaagttaacttttgcttataata 28752090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 29168462 - 29168374
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    ||||| |||||||| ||||||  || |||||||||||||||||||| ||||||| ||||||| |||||| |||||||||| || |||||    
T  29168462 cattctttaaatgatgtatttgatccatattattgaccaaatacattatttaataaatgaacctaaaaagttgatttttgcttgtaata 29168374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 4089219 - 4089139
Alignment:
Q  14 aatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||| |||| | |||| |||||| || || |||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  4089219 aatgatgtatatggtctttattatagaacatatacatcatttaatgaatgaatataaaatattgatttttgtttataatag 4089139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 43813166 - 43813245
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttg 84  Q
    |||||| ||||||| |||| ||||||||| ||||||||| |||||||||||| ||||||||  ||| || ||||||||||    
T  43813166 cattcaataaatgaagtatgtagtctataatattgaccacatacatcatttattgaatgaatctaagaagttgatttttg 43813245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 5083621 - 5083575
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||    
T  5083621 atttcacttttcaatataatattaattatttttttccttttataact 5083575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 46095595 - 46095549
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||    
T  46095595 atttcacttttcaatacaatattaattaattttttcattttataact 46095549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 7701287 - 7701198
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||| |||| |||||| ||||||  |||  |||||||||||||||||||||  |||||  | |||||||| |||||||||    
T  7701287 cattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatctaaaatgtagatttttgcttataatag 7701198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 25245192 - 25245273
Alignment:
Q  13 aaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| |||| |||||| |||| | ||||| |||||||||||||||||||||  |||||  |||||||||| |||||||||    
T  25245192 aaatgatgtatgtagtctttattgtagaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatag 25245273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 31115654 - 31115739
Alignment:
Q  9 cattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||| |||| || ||| |||||| ||||| |||||| ||||||||||||||  |||||  |||||||||| |||||||||    
T  31115654 cattaaatgatgtatatattctttattatagaccacatacataatttaatgaatgaagctaaaatgttgatttttgcttataatag 31115739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 37157116 - 37157176
Alignment:
Q  158 taaaagaactgaactatttcacttttcaatataatattaattacttttttcattttataact 219  Q
    ||||| |||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||    
T  37157116 taaaataactgagctatttcacttttcaatacaatattaattatttttttc-ttttataact 37157176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 219
Target Start/End: Original strand, 11616507 - 11616567
Alignment:
Q  159 aaaagaactgaactatttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||| |||||| | |||||||||||||||| |||||||||||||||||||  |||||||||    
T  11616507 aaaataactgagccatttcacttttcaatacaatattaattacttttttccctttataact 11616567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 29168404 - 29168488
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttat 89  Q
    |||| ||||||| | |||||| ||| ||| ||| || |||||||||||||||| |||||||| |||||| |||||||||| ||||    
T  29168404 catttattaaataatgtatttggtcaataatatggatcaaatacatcatttaaagaatgaacataaaaagttgatttttgcttat 29168488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 46288592 - 46288532
Alignment:
Q  159 aaaagaactgaactatttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||| |||||| | |||||||||||||||||||||||||||| |||||||  |||||||||    
T  46288592 aaaataactgagccatttcacttttcaatataatattaattaattttttccctttataact 46288532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 2610283 - 2610220
Alignment:
Q  12 taaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaat 75  Q
    ||||||| |||||||||||||||| | |||||||||||||| ||| | |||||| |||||||||    
T  2610283 taaatgatgtatttagtctatattctagaccaaatacatcaattactcaatgaatttaaaaaat 2610220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 208
Target Start/End: Complemental strand, 21387753 - 21387718
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttc 208  Q
    ||||||||||||||||||||||||||||||||||||    
T  21387753 atttcacttttcaatataatattaattacttttttc 21387718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 21586886 - 21586824
Alignment:
Q  32 tattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| ||||| |||||||||| ||| ||||||  ||||| |||||||||||||||||||||    
T  21586886 tattatagaccacatacatcattgaataaatgaatctaaaatattgatttttgtttataatag 21586824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 31581590 - 31581544
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||||| |||||||||||||||||||  |||||||||    
T  31581590 atttcacttttcaatacaatattaattacttttttccatttataact 31581544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 40590972 - 40590926
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    ||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  40590972 atttcacttttaaatacaatattaattacttttttccttttataact 40590926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 6803442 - 6803503
Alignment:
Q  33 attattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||| ||||| |||||||||  | |||||||| |||||| |||||||||||||||||||||    
T  6803442 attatagaccatatacatcatcaattgaatgaatttaaaatattgatttttgtttataatag 6803503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 7426040 - 7425991
Alignment:
Q  159 aaaagaactgaactatttcacttttcaatataatattaattacttttttc 208  Q
    |||| |||||| | |||||||||||||||| |||||||||||||||||||    
T  7426040 aaaataactgagccatttcacttttcaatacaatattaattacttttttc 7425991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 39153339 - 39153392
Alignment:
Q  12 taaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaa 65  Q
    ||||||| |||||||||||||||||| |||||||||||||| ||| | ||||||    
T  39153339 taaatgatgtatttagtctatattatagaccaaatacatcaattactcaatgaa 39153392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 42117508 - 42117569
Alignment:
Q  12 taaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    ||||||| |||||||||||||||||  ||| | |||||||||||| ||||||||| ||||||    
T  42117508 taaatgatgtatttagtctatattagggactagatacatcatttattgaatgaacctaaaaa 42117569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 8127901 - 8127957
Alignment:
Q  38 tgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||| |||||||||||||| ||||||||  |||| | ||||||||||||||||||||    
T  8127901 tgacaaaatacatcatttattgaatgaatctaaacagttgatttttgtttataatag 8127957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 8169195 - 8169128
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||| ||||||| |||| |||||||||| || ||||| |||||||||||| ||||||||| ||||||    
T  8169195 cattcaataaatgatgtatgtagtctatat-atagaccacatacatcatttattgaatgaacctaaaaa 8169128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 10300920 - 10300852
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||  ||||| |||||||||| |||||||  |||| |||||||||| ||||||||||| ||||||    
T  10300920 cattcatataatgatgtatttagtccatattatgaaccacatacatcattaaatgaatgaacctaaaaa 10300852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 10595532 - 10595600
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||| | ||||| |||| ||||||||| |||  |||| ||||||||||||||||||||| |||||||    
T  10595532 cattcaattaatgatgtatctagtctataatatgaaccacatacatcatttaatgaatgaatttaaaaa 10595600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 41059356 - 41059392
Alignment:
Q  171 ctatttcacttttcaatataatattaattactttttt 207  Q
    |||||||| ||||||||||||||||||||||||||||    
T  41059356 ctatttcatttttcaatataatattaattactttttt 41059392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 2943277 - 2943222
Alignment:
Q  39 gaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||| |||||||||||||||||||||  |||||  |||||||||| |||||||||    
T  2943277 gaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatag 2943222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 12274886 - 12274819
Alignment:
Q  27 gtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||||||| | ||| |||||||||||| ||||||||| |||||  | |||||||| |||||||||    
T  12274886 gtctatattataggccacatacatcatttattgaatgaacataaaatgtggatttttgcttataatag 12274819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 12308339 - 12308378
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattt 212  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  12308339 atttcaattttcaatacaatattaattacttttttcattt 12308378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 208
Target Start/End: Original strand, 17265987 - 17266022
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttc 208  Q
    ||||||||||||||||||| ||||||||||||||||    
T  17265987 atttcacttttcaatataacattaattacttttttc 17266022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 208
Target Start/End: Complemental strand, 23111677 - 23111642
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttc 208  Q
    |||| |||||||||||||||||||||||||||||||    
T  23111677 attttacttttcaatataatattaattacttttttc 23111642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 34478310 - 34478365
Alignment:
Q  39 gaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||||||| | ||||||  ||||||||| ||||||| |||||||||    
T  34478310 gaccaaatacatcatttagtaaatgaatctaaaaaattaatttttgcttataatag 34478365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 39498614 - 39498669
Alignment:
Q  153 tgtcttaaaagaactgaactatttcacttttcaatataatattaattacttttttc 208  Q
    |||| ||||| |||||| ||||||| |||||||||  |||||||||||||||||||    
T  39498614 tgtcataaaataactgacctatttctcttttcaatgcaatattaattacttttttc 39498669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 52
Target Start/End: Complemental strand, 47538851 - 47538812
Alignment:
Q  13 aaatgaggtatttagtctatattattgaccaaatacatca 52  Q
    |||||| |||| ||||||||||||||||||||||||||||    
T  47538851 aaatgatgtatatagtctatattattgaccaaatacatca 47538812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 52
Target Start/End: Complemental strand, 47545408 - 47545369
Alignment:
Q  13 aaatgaggtatttagtctatattattgaccaaatacatca 52  Q
    |||||| |||| ||||||||||||||||||||||||||||    
T  47545408 aaatgatgtatatagtctatattattgaccaaatacatca 47545369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 2846823 - 2846777
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||||| |  |||||||||||||||| ||||||||||    
T  2846823 atttcacttttcaatacatcattaattacttttttccttttataact 2846777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 5724854 - 5724808
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||||| ||||||||| ||||||||  ||||||||||    
T  5724854 atttcacttttcaatacaatattaatcactttttttcttttataact 5724808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 8595246 - 8595176
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaat 75  Q
    |||||||||||||| |||| |||  | |||||| ||| | |||||||||||||||||||||  ||||||||    
T  8595246 cattcattaaatgatgtatgtagcatttattatagactacatacatcatttaatgaatgaatctaaaaaat 8595176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 21099342 - 21099273
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaat 75  Q
    |||||| ||||||| |||| |||||||||| || |||||  ||||||||||| ||||||||| ||||||||    
T  21099342 cattcaataaatgacgtatgtagtctatat-atagaccacttacatcatttattgaatgaacctaaaaaat 21099273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 28923394 - 28923340
Alignment:
Q  153 tgtcttaaaagaactgaactatttcacttttcaatataatattaattactttttt 207  Q
    |||||||||| ||||||  ||||||| ||||||||| ||||||||||| ||||||    
T  28923394 tgtcttaaaataactgacttatttcatttttcaatacaatattaattattttttt 28923340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 30138887 - 30138801
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataa 91  Q
    |||||| | ||||| |||| |||||| |||||| ||||| | |||||||||||||||||||   ||||  |||||||||| ||||||    
T  30138887 cattcaattaatgatgtatatagtctttattatagaccacacacatcatttaatgaatgaatccaaaatgttgatttttgcttataa 30138801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 30462976 - 30463022
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||| ||| ||||||||| ||||||||| ||||||||||    
T  30462976 atttcacttttccatacaatattaatgacttttttccttttataact 30463022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 32599704 - 32599773
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaat 75  Q
    |||||| ||||||| |||| |||||||||| || ||||| | |||||||||||||||||||| ||| ||||    
T  32599704 cattcaataaatgatgtatgtagtctatat-atagaccacaaacatcatttaatgaatgaacctaacaaat 32599773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 34963958 - 34963912
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||||| | |||||||||||||||||  |||||||||    
T  34963958 atttcacttttcaatacagtattaattacttttttccctttataact 34963912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Complemental strand, 36194791 - 36194757
Alignment:
Q  172 tatttcacttttcaatataatattaattacttttt 206  Q
    ||||||||||||||||||||| |||||||||||||    
T  36194791 tatttcacttttcaatataattttaattacttttt 36194757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 40023873 - 40023839
Alignment:
Q  173 atttcacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||| ||||||||||||||||||    
T  40023873 atttcacttttcaatacaatattaattactttttt 40023839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 10599073 - 10599122
Alignment:
Q  45 atacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||| ||||||||| |||||||| |||||||  |||||||||    
T  10599073 atacatcatttattgaatgaacctaaaaaatagatttttacttataatag 10599122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 23818483 - 23818434
Alignment:
Q  45 atacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||||||||||  |||||  |||||||||| |||||||||    
T  23818483 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataatag 23818434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 31903002 - 31903083
Alignment:
Q  12 taaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    ||||||| |||| |||||||||||  |||| |||||||| | ||| | ||||||| ||||||||| ||| || |||||||||    
T  31903002 taaatgatgtatctagtctatatttatgacgaaatacattaattattcaatgaacctaaaaaattaattattttttataata 31903083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 36117622 - 36117670
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataacttta 222  Q
    |||||||||||||||| ||||||||||| |||||||  ||||||||||||    
T  36117622 atttcacttttcaatacaatattaatta-ttttttccctttataacttta 36117670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 206
Target Start/End: Original strand, 37264273 - 37264306
Alignment:
Q  173 atttcacttttcaatataatattaattacttttt 206  Q
    |||||||||||||||| |||||||||||||||||    
T  37264273 atttcacttttcaatacaatattaattacttttt 37264306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 41699097 - 41699181
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttata 90  Q
    |||||||| ||||| |||| | ||  ||||||| ||||| |||||||||| ||||||||||| | ||||||| | |||||||||||    
T  41699097 cattcatttaatgatgtatgtggttcatattatagaccacatacatcattaaatgaatgaacct-aaaaattcaattttgtttata 41699181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 46022589 - 46022678
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||||||| || |||| |||||| ||||||  |||  |||||||||||||||||||||  |||||  | |||||||  |||||||||    
T  46022589 cattcattaaaggatgtatgtagtctgtattatgaaccgcatacatcatttaatgaatgaatctaaaatgtagattttttcttataatag 46022678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 3882861 - 3882929
Alignment:
Q  14 aatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttt 82  Q
    ||||| ||||||||||| |||||| ||||| |||||| ||| ||||||||||  |||||  ||||||||    
T  3882861 aatgatgtatttagtctttattatagaccacatacataattcaatgaatgaatctaaaatgttgatttt 3882929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 4027259 - 4027327
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | |||||||||||  | || |||||||||| ||||||||||| ||||||    
T  4027259 cattcatttaatgatgtatgttgtctatattatgaatcatatacatcattaaatgaatgaacctaaaaa 4027327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 8571423 - 8571491
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    ||||||||||||||  ||| ||||||||| ||  | | | ||||||||||||||||||||| |||||||    
T  8571423 cattcattaaatgacatatgtagtctataataaagtctacatacatcatttaatgaatgaatttaaaaa 8571491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 16777991 - 16777931
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaa 65  Q
    |||| ||||||||| |||| |||||| |||||| ||| | |||||||||||||| ||||||    
T  16777991 catttattaaatgatgtatgtagtctttattatagactacatacatcatttaataaatgaa 16777931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 19058941 - 19059009
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||| |||||||   |||||||||||||||   || |||||||||||||| | ||||||||||||||    
T  19058941 cattcaataaatgatacatttagtctatattaagaactaaatacatcatttactaaatgaacttaaaaa 19059009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 23797389 - 23797449
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaa 65  Q
    |||||||||||||| |||| ||||||||| ||  ||||| |||||||||| | ||||||||    
T  23797389 cattcattaaatgatgtatgtagtctataataaagaccagatacatcattaattgaatgaa 23797449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 27330590 - 27330638
Alignment:
Q  46 tacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||||||||||||||||  ||||| ||| |||||||| ||||||||    
T  27330590 tacatcatttaatgaatgaatctaaaatattaatttttgtgtataatag 27330638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 29257505 - 29257553
Alignment:
Q  171 ctatttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||||||| |  ||||||||||||||||  |||||||||    
T  29257505 ctatttcacttttcaatacatcattaattacttttttccctttataact 29257553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 37066223 - 37066291
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||| | ||||| |||| | ||||||||||| ||||| |||||||||| | ||||||||| ||||||    
T  37066223 cattcaattaatgatgtatgtggtctatattatggaccacatacatcattaattgaatgaacctaaaaa 37066291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 41699155 - 41699087
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | ||||||| |||  |||| |||||||||| ||||||||||| ||||||    
T  41699155 cattcatttaatgatgtatgtggtctataatatgaaccacatacatcattaaatgaatgaacctaaaaa 41699087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 6e-27; HSPs: 94)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 25694214 - 25694125
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||| || ||| |||||||||| |||||||||    
T  25694214 cattcattaaatgatgtatttggtctatattattgacaaaatacatcatttaatgaatgaacctagaaagttgatttttgcttataatag 25694125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 25694156 - 25694245
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||| |||||| ||| ||| ||| |||||||||||||||||||||||||||| || ||| |||||||||| |||||||||    
T  25694156 cattcattaaatgatgtattttgtcaataatatagaccaaatacatcatttaatgaatgaacctagaaagttgatttttgcttataatag 25694245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 13391630 - 13391541
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| ||||| | ||||||||||||||||||||||||||||||||||||| ||||||||  |||||| |||| ||||  |||||||||    
T  13391630 cattcaataaattatgtatttagtctatattattgaccaaatacatcatttattgaatgaatctaaaaagttgacttttacttataatag 13391541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 32911560 - 32911491
Alignment:
Q  14 aatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgattttt 83  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||| ||||||| |||||| |||||||||    
T  32911560 aatgatgtatttagtctatattatagactaaatacatcatttaataaatgaacctaaaaagttgattttt 32911491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 25814309 - 25814373
Alignment:
Q  158 taaaagaactgaactatttcacttttcaatataatattaattacttttttcattttataacttta 222  Q
    ||||| |||||||  |||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  25814309 taaaataactgaatcatttcacttttcaatacaatattaattacttttttccttttataacttta 25814373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 7613399 - 7613477
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgattttt 83  Q
    |||||||||||||  ||||||||||||||||||| ||||||||||||||||| | ||||||  |||||| |||| ||||    
T  7613399 cattcattaaatgcagtatttagtctatattattaaccaaatacatcatttattaaatgaatctaaaaagttgactttt 7613477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 12922471 - 12922394
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttt 82  Q
    |||||| |||||||  ||||| |||||||||||| | ||||||||||||||| ||||||||  |||||||||||||||    
T  12922471 cattcaataaatgatatatttggtctatattattaaacaaatacatcatttattgaatgaatataaaaaattgatttt 12922394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 23262482 - 23262563
Alignment:
Q  12 taaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    |||||||  ||||| |||||||||| ||| ||||||||||||||| | |||||| |||||||||||| ||||| ||||||||    
T  23262482 taaatgatatatttggtctatattactgatcaaatacatcatttatttaatgaatttaaaaaattgaattttgcttataata 23262563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 1100155 - 1100096
Alignment:
Q  6 attcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaa 65  Q
    ||||||||||||| |||| |||||| |||||| ||||| |||||||||||||||||||||    
T  1100155 attcattaaatgatgtatgtagtctttattatagaccacatacatcatttaatgaatgaa 1100096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 7613450 - 7613368
Alignment:
Q  12 taaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||| |||||| ||  ||| ||| ||| ||||||  ||||||||||||||||||||||| |||||||||| |||||||||    
T  7613450 taaatgatgtatttggttaataatatagactaaatactgcatttaatgaatgaacttaaaaagttgatttttgcttataatag 7613368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 4739654 - 4739578
Alignment:
Q  6 attcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgattttt 83  Q
    ||||| ||||| | |||||| |||||||||||||| |||||||| |||||| | ||||||||||||||||| ||||||    
T  4739654 attcaataaataatgtatttggtctatattattgatcaaataca-catttattcaatgaacttaaaaaattcattttt 4739578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 7276328 - 7276389
Alignment:
Q  158 taaaagaactgaactatttcacttttcaatataatattaattacttttttcattttataact 219  Q
    ||||| ||||||  ||||| ||||||||||| |||||||||||||||||||| |||||||||    
T  7276328 taaaataactgagttattttacttttcaatacaatattaattacttttttcactttataact 7276389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 42575786 - 42575737
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataacttta 222  Q
    |||||||||||||||| |||||||||||||||||||  ||||||||||||    
T  42575786 atttcacttttcaatacaatattaattacttttttccctttataacttta 42575737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 13654607 - 13654540
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||| ||||||| ||||||||||||||| || ||||| |||||||||||| ||||||||| ||||||    
T  13654607 cattcaataaatgatgtatttagtctatat-atggaccacatacatcatttattgaatgaacctaaaaa 13654540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 14259627 - 14259671
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataa 217  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||    
T  14259627 atttcatttttcaatataatattaattacttttttccttttataa 14259671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 42818862 - 42818898
Alignment:
Q  171 ctatttcacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||||||||||||||||||||||||    
T  42818862 ctatttcacttttcaatataatattaattactttttt 42818898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 32911560 - 32911611
Alignment:
Q  32 tattattgaccaaatacatcatttaatgaatgaacttaaaaaattgattttt 83  Q
    |||||| ||| |||||||||||||||||||||||| |||||| |||||||||    
T  32911560 tattatagactaaatacatcatttaatgaatgaacctaaaaagttgattttt 32911611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 33075140 - 33075195
Alignment:
Q  39 gaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||| |||||||||||||||||||||| ||||| ||| ||||||| |||||||||    
T  33075140 gaccacatacatcatttaatgaatgaacctaaaatattaatttttgcttataatag 33075195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 34820698 - 34820647
Alignment:
Q  31 atattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttt 82  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||||| |||||    
T  34820698 atattatagaccacatacatcattaaatgaatgaacttaaaaaattaatttt 34820647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 4412343 - 4412389
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||||| |||||||||||||||||||  |||||||||    
T  4412343 atttcacttttcaatacaatattaattacttttttccctttataact 4412389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 18652841 - 18652895
Alignment:
Q  40 accaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||| |||||||||||||||||||||  |||||  ||||||||||||||||||||    
T  18652841 accacatacatcatttaatgaatgaatctaaaatgttgatttttgtttataatag 18652895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 35646237 - 35646191
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    ||||||||||||||||  |||||||||||||||||| ||||||||||    
T  35646237 atttcacttttcaatacgatattaattacttttttccttttataact 35646191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 37067676 - 37067622
Alignment:
Q  40 accaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||| |||||||||||||||||||||  ||||| ||| |||||||||||||||||    
T  37067676 accacatacatcatttaatgaatgaatctaaaatattaatttttgtttataatag 37067622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 4349201 - 4349121
Alignment:
Q  12 taaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    ||||||| |||||| ||||||||||||||| ||||| |  ||||| | |||||| ||||||| |||||||||| ||||||||    
T  4349201 taaatgatgtatttggtctatattattgacaaaataaacaatttattaaatgaa-ttaaaaagttgatttttgcttataata 4349121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 13356213 - 13356266
Alignment:
Q  40 accaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    |||| |||||||||||| |||||||||||||||| | |||||||| ||||||||    
T  13356213 accacatacatcatttattgaatgaacttaaaaagtagatttttgcttataata 13356266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 14772636 - 14772558
Alignment:
Q  14 aatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||| |||| |||||| |||||| ||||| |  ||||||||||||||||||| |||||  |||||||||| |||||||||    
T  14772636 aatgatgtatatagtctttattatagaccaca--catcatttaatgaatgaacctaaaatgttgatttttgcttataatag 14772558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 15898151 - 15898188
Alignment:
Q  172 tatttcacttttcaatataatattaattacttttttca 209  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  15898151 tatttcacttttcaatacaatattaattacttttttca 15898188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 17153504 - 17153553
Alignment:
Q  45 atacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||||||||| ||||||| |||||| || ||||||||||||||||||    
T  17153504 atacatcatttaacgaatgaatttaaaatatagatttttgtttataatag 17153553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 17967356 - 17967445
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| ||||| | |||| | ||||||||||  ||||| |||||||||||| ||||||||  ||||| ||  |||||||||||||||||    
T  17967356 cattcaataaataatgtatgttgtctatattaaagaccacatacatcatttattgaatgaatataaaatatcaatttttgtttataatag 17967445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 19216384 - 19216315
Alignment:
Q  6 attcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaat 75  Q
    ||||| ||||||| | || ||||||||||||| ||||| || ||||||||| ||||||||| ||||||||    
T  19216384 attcaataaatgatgcatgtagtctatattatggaccacatgcatcatttattgaatgaacctaaaaaat 19216315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 22227080 - 22227039
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaat 46  Q
    ||||||||||||||  ||||||||||||||||||||||||||    
T  22227080 cattcattaaatgatatatttagtctatattattgaccaaat 22227039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 33545910 - 33545825
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttata 90  Q
    ||||| || ||||| |||| | |||||||||||  || | |||||||||| ||||||||||| |||||||||  ||||||||||||    
T  33545910 cattcgtttaatgatgtatgtggtctatattatgaactacatacatcattaaatgaatgaacctaaaaaattattttttgtttata 33545825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 4162902 - 4162834
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | |||||||||||  |||| |||||||||| ||||||||||| ||||||    
T  4162902 cattcatttaatgatgtatgtggtctatattatgaaccatatacatcattaaatgaatgaacctaaaaa 4162834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 4297275 - 4297327
Alignment:
Q  42 caaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||||||||||||| ||||||  |||||  ||||||||||||||||||||    
T  4297275 caaatacatcatttaattaatgaatataaaatgttgatttttgtttataatag 4297327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 5504449 - 5504409
Alignment:
Q  32 tattattgaccaaatacatcatttaatgaatgaacttaaaa 72  Q
    |||||| ||||||||||||||||||||||||||| ||||||    
T  5504449 tattatagaccaaatacatcatttaatgaatgaatttaaaa 5504409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 8941213 - 8941249
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttca 209  Q
    ||||||||||||||| |||||||||||||||||||||    
T  8941213 atttcacttttcaatctaatattaattacttttttca 8941249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 11795777 - 11795865
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    |||||| | ||||| |||| | |||| |||||| ||||| ||| |||||||||||||||||   |||| ||||||||||| ||||||||    
T  11795777 cattcaattaatgatgtatatggtctttattatagaccacatatatcatttaatgaatgaataaaaaatattgatttttgcttataata 11795865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 16899728 - 16899796
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||| ||||||||| |||| |||||||||||||  |  | |||||||||||||||||||||| ||||||    
T  16899728 catttattaaatgacgtatgtagtctatattataaattatatacatcatttaatgaatgaacctaaaaa 16899796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 17625739 - 17625679
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaa 65  Q
    |||||||||||||| |||| |||||| ||||||  |||  |||||||||||||||||||||    
T  17625739 cattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaa 17625679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 18003956 - 18003888
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | |||||||||||  |||| |||||||||| ||||||||||| ||||||    
T  18003956 cattcatttaatgatgtatgtggtctatattatgaaccacatacatcattaaatgaatgaacctaaaaa 18003888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 22227039 - 22227111
Alignment:
Q  22 atttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||| ||| ||| ||| ||| ||||| |||||||||||||||||| |||||  |||||||||| |||||||||    
T  22227039 atttggtcaataatatagactaaatatatcatttaatgaatgaacctaaaacgttgatttttgcttataatag 22227111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 25792920 - 25792976
Alignment:
Q  38 tgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| |||||||||||||||||||||| |||||| |  ||||||| |||||||||    
T  25792920 tgaccacatacatcatttaatgaatgaacctaaaaagtaaatttttgcttataatag 25792976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 25941763 - 25941799
Alignment:
Q  58 tgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||||||||||| |||||||||||||||||||||    
T  25941763 tgaatgaacttaaaatattgatttttgtttataatag 25941799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 27314574 - 27314514
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaa 65  Q
    |||||||||||||| |||| |||||| |||||| ||| | |||| ||||||||||||||||    
T  27314574 cattcattaaatgacgtatgtagtctttattatagactacatacgtcatttaatgaatgaa 27314514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 31691072 - 31691004
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | ||||||| |||  |||| |||||||||| ||||||||||||||||||    
T  31691072 cattcatttaatgatgtatctggtctataatatgaaccatatacatcattaaatgaatgaacttaaaaa 31691004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 2673945 - 2673878
Alignment:
Q  6 attcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    ||||| ||||||| | || ||||||||||||| ||||| |||||||||||| |||||| || ||||||    
T  2673945 attcaataaatgatgcatgtagtctatattatagaccacatacatcatttattgaatgtacctaaaaa 2673878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 208
Target Start/End: Complemental strand, 4044624 - 4044589
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttc 208  Q
    |||||||||||||||| |||||||||||||||||||    
T  4044624 atttcacttttcaatacaatattaattacttttttc 4044589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 4194600 - 4194634
Alignment:
Q  173 atttcacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||| ||||||||||||||||||    
T  4194600 atttcacttttcaatacaatattaattactttttt 4194634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 9426701 - 9426667
Alignment:
Q  173 atttcacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||| ||||||||||||||||||    
T  9426701 atttcacttttcaatacaatattaattactttttt 9426667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 13016512 - 13016478
Alignment:
Q  173 atttcacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||| ||||||||||||||||||    
T  13016512 atttcacttttcaatacaatattaattactttttt 13016478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 13087890 - 13087856
Alignment:
Q  173 atttcacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||| ||||||||||||||||||    
T  13087890 atttcacttttcaatacaatattaattactttttt 13087856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 13597989 - 13598023
Alignment:
Q  173 atttcacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||| ||||||||||||||||||    
T  13597989 atttcacttttcaatacaatattaattactttttt 13598023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 14184197 - 14184163
Alignment:
Q  173 atttcacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||| ||||||||||||||||||    
T  14184197 atttcacttttcaatacaatattaattactttttt 14184163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 15475903 - 15475949
Alignment:
Q  27 gtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||||||| |||| ||| |||||| ||||||||||||||||||    
T  15475903 gtctatattattaaccacatatatcattaaatgaatgaacttaaaaa 15475949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 20369235 - 20369269
Alignment:
Q  173 atttcacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||| ||||||||||||||||||    
T  20369235 atttcacttttcaatacaatattaattactttttt 20369269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 24534562 - 24534596
Alignment:
Q  173 atttcacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||| ||||||||||||||||||    
T  24534562 atttcacttttcaatacaatattaattactttttt 24534596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 31090264 - 31090298
Alignment:
Q  173 atttcacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||| ||||||||||||||||||    
T  31090264 atttcacttttcaatacaatattaattactttttt 31090298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 39008089 - 39008135
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||||| ||||||||||| |||||||  |||||||||    
T  39008089 atttcacttttcaatacaatattaattatttttttccctttataact 39008135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 43176350 - 43176280
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaat 75  Q
    |||||||| ||||| |||| | ||||||| |||  |||| |||||||||| ||||||||||| ||||||||    
T  43176350 cattcatttaatgatgtatctggtctataatatgaaccatatacatcattaaatgaatgaacctaaaaaat 43176280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 43438339 - 43438385
Alignment:
Q  48 catcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||||||||||||||  ||||| ||| |||||||||||||||||    
T  43438339 catcatttaatgaatgaatctaaaatattaatttttgtttataatag 43438385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 884944 - 884989
Alignment:
Q  30 tatattattgaccaaatacatcatttaatgaatgaacttaaaaaat 75  Q
    |||| ||| ||||| |||||||||||| ||||||||||||||||||    
T  884944 tataatatggaccacatacatcatttattgaatgaacttaaaaaat 884989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 4738318 - 4738363
Alignment:
Q  49 atcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||| ||| ||||| ||||||||| |||||||||||||||||    
T  4738318 atcatttattgattgaacctaaaaaattaatttttgtttataatag 4738363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 4967773 - 4967724
Alignment:
Q  45 atacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||| |||||| ||||||  |||||||||||||| |||||    
T  4967773 atacatcatttaataaatgaatttaaaatgttgatttttgtttaaaatag 4967724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 5259464 - 5259399
Alignment:
Q  25 tagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttata 90  Q
    |||||| |||||| ||||| |||||||||| ||||||||||| ||||| || | |||||| |||||    
T  5259464 tagtctttattatagaccacatacatcattaaatgaatgaacctaaaatatagttttttgcttata 5259399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 7505164 - 7505225
Alignment:
Q  32 tattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    |||||| || || |||||||||||||||||||||   ||||  |||||||||||||||||||    
T  7505164 tattatagatcacatacatcatttaatgaatgaatccaaaatgttgatttttgtttataata 7505225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 13135713 - 13135762
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataacttta 222  Q
    |||||||||||||||| |||||||| || |||||||  ||||||||||||    
T  13135713 atttcacttttcaatacaatattaaatatttttttccctttataacttta 13135762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 13654550 - 13654638
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| ||||||| |||| | ||| |||| || ||| |||||||||||||| |||||||| ||||||| |  ||||||| |||||||||    
T  13654550 cattcaataaatgatgtatgtggtccatat-atagactaaatacatcatttattgaatgaatttaaaaagtgaatttttgcttataatag 13654638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 16056786 - 16056863
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttt 82  Q
    |||||||| ||||| |||| |  || |||||||  |||| |||||||||| ||||||||||| ||||||||| |||||    
T  16056786 cattcatttaatgatgtatatgatccatattatgaaccacatacatcattaaatgaatgaacctaaaaaattaatttt 16056863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 29177792 - 29177723
Alignment:
Q  25 tagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| |||| | ||||| ||||||||||||||| || ||  ||||| |||||||||| ||||||||||    
T  29177792 tagtctttattgtagaccacatacatcatttaatgtataaatctaaaatattgatttttctttataatag 29177723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 32398084 - 32398133
Alignment:
Q  45 atacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||| | |||||||| |||||| || ||||||||||||||||||    
T  32398084 atacatcattaattgaatgaatttaaaatatagatttttgtttataatag 32398133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 32911511 - 32911560
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatt 54  Q
    |||| ||||||||| |||||||||||||| ||| ||| ||||||||||||    
T  32911511 catttattaaatgatgtatttagtctataatatagactaaatacatcatt 32911560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 33012314 - 33012359
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataac 218  Q
    |||||||||||||||  |||||||||||||||||||  ||||||||    
T  33012314 atttcacttttcaatgcaatattaattacttttttctctttataac 33012359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 33545852 - 33545929
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttt 82  Q
    |||||||| ||||| |||| ||||  ||| ||| ||||| |||||||||| || ||||||||||| |||||| |||||    
T  33545852 cattcatttaatgatgtatgtagttcataatatagaccacatacatcattaaacgaatgaacttataaaattaatttt 33545929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 207
Target Start/End: Complemental strand, 35585764 - 35585731
Alignment:
Q  174 tttcacttttcaatataatattaattactttttt 207  Q
    ||||||||||||||| ||||||||||||||||||    
T  35585764 tttcacttttcaatacaatattaattactttttt 35585731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 37685054 - 37685001
Alignment:
Q  20 gtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||| |||||||||||||  |||| |||||||||| | ||||||||||||||||    
T  37685054 gtatgtagtctatattatgaaccacatacatcattaattgaatgaacttaaaaa 37685001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 4409389 - 4409421
Alignment:
Q  20 gtatttagtctatattattgaccaaatacatca 52  Q
    |||||||||||||||||| ||||||||||||||    
T  4409389 gtatttagtctatattatagaccaaatacatca 4409421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 6168778 - 6168710
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | ||  ||||||| ||||| |||||||||| ||||||||||| ||||||    
T  6168778 cattcatttaatgatgtatgtggttcatattatggaccacatacatcattaaatgaatgaacctaaaaa 6168710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 6279509 - 6279441
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||| ||||| | |||| | ||| ||||||| ||||| |||||||||||| ||||||||| ||||||    
T  6279509 cattcaataaattatgtatgtggtccatattatagaccacatacatcatttagtgaatgaacctaaaaa 6279441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 7613653 - 7613701
Alignment:
Q  159 aaaagaactgaactatttcacttttcaatataatattaattactttttt 207  Q
    |||| |||| ||| ||||||||||| |||| ||||||||||||||||||    
T  7613653 aaaataactaaaccatttcactttttaatacaatattaattactttttt 7613701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 8468420 - 8468464
Alignment:
Q  28 tctatattattgaccaaatacatcatttaatgaatgaacttaaaa 72  Q
    |||||||||| ||||| |||||||||| ||||||||||| |||||    
T  8468420 tctatattatggaccacatacatcattaaatgaatgaacctaaaa 8468464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 8618438 - 8618506
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | ||| |||||||  |||| |||||||||| ||||||||||| ||||||    
T  8618438 cattcatttaatgatgtatgtggtccatattatgaaccacatacatcattaaatgaatgaacctaaaaa 8618506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 8959884 - 8959824
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaa 65  Q
    |||||||| |||||||||| | |||||||||||  |||| |||||||||| ||||| ||||    
T  8959884 cattcatttaatgaggtatgttgtctatattatgaaccacatacatcattaaatgattgaa 8959824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 12891387 - 12891319
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| |  ||||||||||  |||| |||||||||| ||||||||||| ||||||    
T  12891387 cattcatttaatgatgtatgtgatctatattatgaaccacatacatcattaaatgaatgaacctaaaaa 12891319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 14303093 - 14303157
Alignment:
Q  30 tatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||| ||| | |||||| ||||| |||||||| ||||| |||  |||||||||||||||||    
T  14303093 tatattatagacaacatacattatttattgaatgaatttaaagaatgaatttttgtttataatag 14303157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 18033453 - 18033369
Alignment:
Q  6 attcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttata 90  Q
    ||||||| ||||| |||  | |||| |||||| ||||| |||||||||| ||||||||||| ||||| || | |||||| |||||    
T  18033453 attcatttaatgatgtacatggtctttattatagaccacatacatcattaaatgaatgaacctaaaatatagttttttgcttata 18033369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 18753710 - 18753642
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | ||  ||||||| ||||| |||||||||| ||||||||||| ||||||    
T  18753710 cattcatttaatgatgtatgtggttcatattatagaccacatacatcattaaatgaatgaacctaaaaa 18753642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 18753652 - 18753720
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | ||||||| |||  |||| |||||||||| ||||||||||| ||||||    
T  18753652 cattcatttaatgatgtatgtggtctataatatgaaccacatacatcattaaatgaatgaacctaaaaa 18753720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 24089141 - 24089073
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||| ||||||| | || | ||||||| ||| ||||| |||||||||||| ||||||||| ||||||    
T  24089141 cattcaataaatgatgaatgtggtctataatatggaccacatacatcatttattgaatgaacctaaaaa 24089073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 27314516 - 27314576
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaa 65  Q
    |||||||||||||| |||| ||||||||| ||  ||| | |||| ||||||||||||||||    
T  27314516 cattcattaaatgacgtatgtagtctataataaagactacatacgtcatttaatgaatgaa 27314576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 31691014 - 31691082
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | ||  ||||||| ||||| |||||||||| ||||||||||| ||||||    
T  31691014 cattcatttaatgatgtatatggttcatattatagaccagatacatcattaaatgaatgaacctaaaaa 31691082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 32146894 - 32146938
Alignment:
Q  31 atattattgaccaaatacatcatttaatgaatgaacttaaaaaat 75  Q
    |||||||| |||| |||||||||| ||||||||||| ||||||||    
T  32146894 atattattaaccacatacatcattaaatgaatgaacctaaaaaat 32146938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 33821119 - 33821059
Alignment:
Q  27 gtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgttt 87  Q
    ||||||||||| ||| |||||||| | ||| | ||||||| ||||||| ||||||||||||    
T  33821119 gtctatattatagactaaatacataagttattcaatgaacctaaaaaaatgatttttgttt 33821059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 41062516 - 41062584
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | ||| |||||||  |||| |||||| ||| ||||||||||||||||||    
T  41062516 cattcatttaatgatgtatgtggtccatattatgaaccacatacattattaaatgaatgaacttaaaaa 41062584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 43176292 - 43176360
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | ||  ||||||| ||||| |||||||||| ||||||||||| ||||||    
T  43176292 cattcatttaatgatgtatatggttcatattatagaccagatacatcattaaatgaatgaacctaaaaa 43176360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 2401138 - 2401051
Alignment:
Q  6 attcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||| || | ||||| ||||||||    
T  2401138 attcattaaatgatgtatttagtctatattattgaccaaatacatcatttattgaatgaatttaaaaagttaacttttgcttataata 2401051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 55936028 - 55936117
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||| |||| | |||| |||||| ||||| |||||||||||||||||||||  ||||| ||||||||||| |||||||||    
T  55936028 cattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatgaatctaaaatattgatttttgcttataatag 55936117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 52914039 - 52914128
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||| |||||| |||| |||||| |||||| ||||| |||||||||||||||||||||  ||||| ||| ||||||| |||||||||    
T  52914039 cattcatgaaatgatgtatatagtctttattatagaccacatacatcatttaatgaatgaatctaaaatattaatttttgcttataatag 52914128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 34616314 - 34616225
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||| |||| |||||| ||||||  |||  |||||||||||||||||||||  |||||  | ||||||||||||||||||    
T  34616314 cattcattaaatgatgtatatagtctgtattataaaccgcatacatcatttaatgaatgaatctaaaatgtagatttttgtttataatag 34616225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 46518468 - 46518549
Alignment:
Q  12 taaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    ||||||| |||||| || |||||||||||| |||||||||||||| ||||| ||| |||||| || ||||||| ||||||||    
T  46518468 taaatgatgtatttggtatatattattgactaaatacatcatttattgaataaacctaaaaagttaatttttgcttataata 46518549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 47181658 - 47181569
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||| |||| |||||| ||||||  |||  ||||||||||||||||||||| ||||||  | |||||||| |||||||||    
T  47181658 cattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatttaaaatgtagatttttgcttataatag 47181569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 48402452 - 48402541
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||| |||| |||||| ||||||  |||  |||||||||||||||||||||  ||||| || |||||||| |||||||||    
T  48402452 cattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatctaaaatatagatttttgcttataatag 48402541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 2254052 - 2253965
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    |||||| |||||||  ||| |||||||||| || ||||| |||||||||||||||||| ||  ||||||||| ||||||||||||||||    
T  2254052 cattcaataaatgatatatgtagtctatat-atagaccacatacatcatttaatgaataaatctaaaaaattaatttttgtttataata 2253965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 49448781 - 49448833
Alignment:
Q  155 tcttaaaagaactgaactatttcacttttcaatataatattaattactttttt 207  Q
    |||||||| |||||| | |||||||||||||||||||||||||||||||||||    
T  49448781 tcttaaaataactgatccatttcacttttcaatataatattaattactttttt 49448833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 171 - 222
Target Start/End: Complemental strand, 18873101 - 18873050
Alignment:
Q  171 ctatttcacttttcaatataatattaattacttttttcattttataacttta 222  Q
    |||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  18873101 ctatttcacttttcaatacaatattaattacttttttcaaattataacttta 18873050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 43616224 - 43616275
Alignment:
Q  43 aaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||||| |||||| |||||||||||||||||| |||||||||    
T  43616224 aaatacatcatttaataaatgaatttaaaaaattgatttttgcttataatag 43616275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 1825395 - 1825349
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||    
T  1825395 atttcacttttcaatataatattaattatttttttctttttataact 1825349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 19934679 - 19934768
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| ||||||| |||| | |||||| | || ||||| |||||||||||| ||||||||  |||||||| |||||||| |||||||||    
T  19934679 cattcaataaatgatgtatgtggtctatttaatggaccacatacatcatttattgaatgaatctaaaaaatagatttttgcttataatag 19934768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 39160855 - 39160944
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||| ||||||||| |||| |||||| ||||||  |||  |||||||||||||||||||||  |||||  | ||||||||||||||||||    
T  39160855 catttattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatctaaaatgtagatttttgtttataatag 39160944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 54164854 - 54164943
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| ||||||| |||| | |||||| | || ||||| |||||||||||| ||||||||  |||||||| |||||||| |||||||||    
T  54164854 cattcaataaatgatgtatgtggtctatttaatggaccacatacatcatttattgaatgaatctaaaaaatagatttttgcttataatag 54164943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 9992700 - 9992624
Alignment:
Q  6 attcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttt 82  Q
    ||||| ||||||| |||| ||||||||| |||||| || |||||||||||| ||||||||| ||| |||| ||||||    
T  9992700 attcaataaatgatgtatatagtctataatattgatcatatacatcatttattgaatgaacctaataaatagatttt 9992624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 28702102 - 28702170
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||||||||| |||| |||||| |||||| ||| | |||| ||||||||||||||||| ||||||    
T  28702102 cattcattaaatgatgtatgtagtctttattatagactacatacgtcatttaatgaatgaacctaaaaa 28702170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 34321481 - 34321413
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| |||||||||||||  |||| |||||||||| ||||||||||| ||||||    
T  34321481 cattcatttaatgatgtatgtagtctatattatgaaccacatacatcattaaatgaatgaacctaaaaa 34321413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 15641322 - 15641252
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaat 75  Q
    |||||||| ||||| |||| ||||  ||| ||| ||||| |||||||||| ||||||||||||||||||||    
T  15641322 cattcatttaatgatgtatgtagttcataatatagaccatatacatcattaaatgaatgaacttaaaaaat 15641252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 18849906 - 18849860
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||||| |||||||||||||||||||  |||||||||    
T  18849906 atttcacttttcaataaaatattaattacttttttccctttataact 18849860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 24798195 - 24798257
Alignment:
Q  32 tattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| |||||  |||||||||||||||||||| |||||| ||| ||||||| |||||||||    
T  24798195 tattatagaccacgtacatcatttaatgaatgaatttaaaatattaatttttgcttataatag 24798257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 29644315 - 29644361
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||||| ||||||||| ||||||||| ||||||||||    
T  29644315 atttcacttttcaatacaatattaataacttttttccttttataact 29644361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 40881340 - 40881294
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||||| |||| |||||||||||||| ||||||||||    
T  40881340 atttcacttttcaatacaatagtaattacttttttccttttataact 40881294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 51527379 - 51527425
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    ||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  51527379 atttcactttttaatacaatattaattacttttttccttttataact 51527425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 3094365 - 3094277
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| ||||||| |||| |||||||||   | ||||| |||||||||||| ||||||||  ||||||||  |||||||||||||||||    
T  3094365 cattcaataaatgacgtatgtagtctatacg-tagaccatatacatcatttattgaatgaatataaaaaataaatttttgtttataatag 3094277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 12672506 - 12672575
Alignment:
Q  25 tagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| |||| | ||||| |||||||||||||||||| ||  ||||| |||||||||| ||||||||||    
T  12672506 tagtctttattgtggaccacatacatcatttaatgaataaatctaaaatattgatttttctttataatag 12672575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 14061594 - 14061505
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||| | || | |||||  | |||||||| |||||||||| ||||||||||| |||||| || | ||||| |||||||||    
T  14061594 cattcattaaatgatgaatatggtctacttgattgaccagatacatcattcaatgaatgaacctaaaaagttaacttttgcttataatag 14061505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 29006934 - 29006845
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| ||||||| |||| | |||||| | || || || |||||||||||| ||||||||  |||||||| |||||||| |||||||||    
T  29006934 cattcaataaatgatgtatgtggtctatttaatggatcacatacatcatttattgaatgaatctaaaaaatagatttttgcttataatag 29006845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 33150599 - 33150648
Alignment:
Q  27 gtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaatt 76  Q
    ||||||| ||| || ||||||||||||||||||||| |||||||||||||    
T  33150599 gtctataatatagatcaaatacatcatttaatgaataaacttaaaaaatt 33150648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 36786191 - 36786280
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| | ||||| |||| |||||| ||||||  |||| ||||||||||| |||||||||   |||| ||||||||||| |||||||||    
T  36786191 cattcaattaatgatgtatatagtctttattataaaccacatacatcatttgatgaatgaatccaaaatattgatttttgcttataatag 36786280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 38382075 - 38381986
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||| |||| |||||| ||||||  |||| |||||||||||||| ||||||  |||||  |  ||||||| |||||||||    
T  38382075 cattcattaaatgatgtatgtagtctgtattataaaccacatacatcatttaatcaatgaatctaaaatgtaaatttttgcttataatag 38381986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 56364367 - 56364456
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||| |||| |||||| ||||||  |||  |||||||||||||||||||||  |||||  | |||||||  |||||||||    
T  56364367 cattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatctaaaatgtagatttttacttataatag 56364456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 2253996 - 2254083
Alignment:
Q  6 attcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||||||||| |||| | |||||||| || ||| | ||| |||||||| |||||||| |||||||||  | |||||||||||||||    
T  2253996 attcattaaatgatgtatgtggtctatat-atagactacatatatcatttattgaatgaatttaaaaaataaacttttgtttataatag 2254083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 9011844 - 9011776
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | |||||||||||  |||| |||||||||| ||||||||||| ||||||    
T  9011844 cattcatttaatgatgtatgtggtctatattatgaaccacatacatcattaaatgaatgaacataaaaa 9011776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 209
Target Start/End: Original strand, 19688260 - 19688312
Alignment:
Q  157 ttaaaagaactgaactatttcacttttcaatataatattaattacttttttca 209  Q
    |||||| || ||| |||||||||||||||||| ||||| ||||||||||||||    
T  19688260 ttaaaataaatgacctatttcacttttcaatacaatatcaattacttttttca 19688312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 20964443 - 20964407
Alignment:
Q  171 ctatttcacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||||| ||||||||||||||||||    
T  20964443 ctatttcacttttcaatacaatattaattactttttt 20964407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 21142180 - 21142100
Alignment:
Q  14 aatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||| |||| | |||| ||||||  || ||||||||||||||||| |||||  |||||  ||||||||||||||||||||    
T  21142180 aatgatgtatatggtctttattataaactaaatacatcatttaatgcatgaatctaaaatgttgatttttgtttataatag 21142100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 28702160 - 28702100
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaa 65  Q
    |||||||||||||| |||| ||||||||| ||  ||| | |||||||||||||||||||||    
T  28702160 cattcattaaatgacgtatgtagtctataataaagactacatacatcatttaatgaatgaa 28702100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 31808421 - 31808353
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | |||||||||||  |||| |||||||||| ||||||||||| ||||||    
T  31808421 cattcatttaatgatgtatgtggtctatattatgaaccacatacatcattaaatgaatgaacctaaaaa 31808353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 39533797 - 39533885
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    |||| ||||||||| |||| || ||| |||||| || || |||||||||||||||||| ||  |||||  |||||||||| ||||||||    
T  39533797 catttattaaatgatgtatataatctttattatagatcacatacatcatttaatgaataaatctaaaatgttgatttttgcttataata 39533885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 43335185 - 43335137
Alignment:
Q  158 taaaagaactgaactatttcacttttcaatataatattaattacttttt 206  Q
    ||||| ||||||  ||||||||||||||||| |||||||||||||||||    
T  43335185 taaaataactgatttatttcacttttcaatacaatattaattacttttt 43335137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 44171493 - 44171445
Alignment:
Q  45 atacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    |||||||||||| |||||||| |||||||||| | ||||||||||||||    
T  44171493 atacatcatttattgaatgaatttaaaaaattaacttttgtttataata 44171445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 54729644 - 54729584
Alignment:
Q  159 aaaagaactgaactatttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||| |||||||  |||||||||| ||||| |||||||||||||||||||  |||||||||    
T  54729644 aaaataactgaatcatttcactttccaatacaatattaattacttttttccctttataact 54729584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 207
Target Start/End: Original strand, 8974647 - 8974682
Alignment:
Q  172 tatttcacttttcaatataatattaattactttttt 207  Q
    ||||||| ||||||||||||||||||||||||||||    
T  8974647 tatttcagttttcaatataatattaattactttttt 8974682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 208
Target Start/End: Original strand, 38319871 - 38319906
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttc 208  Q
    |||||||||||||||| |||||||||||||||||||    
T  38319871 atttcacttttcaatacaatattaattacttttttc 38319906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 39979739 - 39979786
Alignment:
Q  172 tatttcacttttcaatataatattaattacttttttcattttataact 219  Q
    ||||||||||||||||| ||||||||||||||||| |  |||||||||    
T  39979739 tatttcacttttcaatacaatattaattactttttcccctttataact 39979786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 41203696 - 41203743
Alignment:
Q  173 atttcacttttcaatataatattaattac-ttttttcattttataact 219  Q
    ||||||||| |||||| |||||||||||| ||||||||||||||||||    
T  41203696 atttcacttatcaatacaatattaattactttttttcattttataact 41203743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 56328549 - 56328482
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaa 72  Q
    |||||||| ||||| | || |||||| |||||| ||||| |||||||||| ||||||||||| |||||    
T  56328549 cattcatttaatgatgcatatagtctttattatagaccacatacatcattaaatgaatgaacctaaaa 56328482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 171169 - 171239
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaat 75  Q
    |||||||| ||||| |||| | ||| |||||||  |||| |||||||||| ||||||||||| ||||||||    
T  171169 cattcatttaatgatgtatgtggtccatattatgaaccacatacatcattaaatgaatgaacctaaaaaat 171239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Complemental strand, 388568 - 388534
Alignment:
Q  172 tatttcacttttcaatataatattaattacttttt 206  Q
    ||||||||||||||||| |||||||||||||||||    
T  388568 tatttcacttttcaatacaatattaattacttttt 388534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 2401081 - 2401159
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgattttt 83  Q
    |||||| ||||||| |||||| ||| ||| ||| ||| |||||||||||||||||||| ||  ||| || |||||||||    
T  2401081 cattcaataaatgatgtatttggtcaataatatagactaaatacatcatttaatgaataaatctaataagttgattttt 2401159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 2994762 - 2994832
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaat 75  Q
    |||||||| ||||| |||| ||||  ||| ||| ||||| |||||||||| ||||||||||| ||||||||    
T  2994762 cattcatttaatgatgtatgtagttcataatatggaccacatacatcattaaatgaatgaacctaaaaaat 2994832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 5291649 - 5291683
Alignment:
Q  173 atttcacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||| ||||||||||||||||||    
T  5291649 atttcacttttcaatacaatattaattactttttt 5291683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 8294991 - 8295037
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||||| |||||||||||| ||||||  |||||||||    
T  8294991 atttcacttttcaatacaatattaattacctttttccctttataact 8295037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 17237003 - 17237037
Alignment:
Q  173 atttcacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||||||||||||||| ||||||    
T  17237003 atttcacttttcaatataatattaattaatttttt 17237037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 28330752 - 28330786
Alignment:
Q  173 atttcacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||| ||||||||||||||||||    
T  28330752 atttcacttttcaatacaatattaattactttttt 28330786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 73
Target Start/End: Original strand, 35967456 - 35967490
Alignment:
Q  39 gaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    ||||| |||||||||||||||||||||||||||||    
T  35967456 gaccacatacatcatttaatgaatgaacttaaaaa 35967490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 36047248 - 36047214
Alignment:
Q  173 atttcacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||| ||||||||||||||||||    
T  36047248 atttcacttttcaatacaatattaattactttttt 36047214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 39053047 - 39053002
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    ||||||||||||||||||||||||| || ||||||| ||||||||||    
T  39053047 atttcacttttcaatataatattaacta-ttttttccttttataact 39053002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 48740480 - 48740526
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||| | |||||||||||||||||||  |||||||||    
T  48740480 atttcacttttcaaaacaatattaattacttttttccctttataact 48740526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 49218930 - 49218896
Alignment:
Q  173 atttcacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||| ||||||||||||||||||    
T  49218930 atttcacttttcaatacaatattaattactttttt 49218896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 49812189 - 49812235
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||||| ||||||||||| |||||||  |||||||||    
T  49812189 atttcacttttcaatacaatattaattatttttttccctttataact 49812235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 55360497 - 55360463
Alignment:
Q  173 atttcacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||| ||||||||||||||||||    
T  55360497 atttcacttttcaatacaatattaattactttttt 55360463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 2582880 - 2582819
Alignment:
Q  32 tattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    |||||| ||| | |||||||||||||||||| ||  ||||| ||||||||||| ||||||||    
T  2582880 tattatagactacatacatcatttaatgaatcaatctaaaatattgatttttgcttataata 2582819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 4406340 - 4406251
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| | ||||| |||| | |||| |||||| ||||| |||||||||||||||||| ||  |||||  |||||||||  |||||||||    
T  4406340 cattcaattaatgatgtatgtggtctttattatagaccacatacatcatttaatgaataaatctaaaatgttgatttttacttataatag 4406251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 6462771 - 6462726
Alignment:
Q  45 atacatcatttaatgaatgaacttaaaaaattgatttttgtttata 90  Q
    |||||||||||| ||||||||| |||||| | ||||||||||||||    
T  6462771 atacatcatttattgaatgaacctaaaaagtagatttttgtttata 6462726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 8826964 - 8826875
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||| ||| ||||| |||| | |||| |||||| || || |||||||||||||||||| || |||||| |   |||||||||||||||||    
T  8826964 catttatttaatgatgtatatggtctttattatagatcacatacatcatttaatgaataaatttaaaatacaaatttttgtttataatag 8826875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 32645550 - 32645623
Alignment:
Q  20 gtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    |||||||||||||  |||||||||||||||||| ||| | ||||||  ||||| |||  |||||| ||||||||    
T  32645550 gtatttagtctattatattgaccaaatacatcaattattcaatgaatctaaaacattattttttgcttataata 32645623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 35967480 - 35967411
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaa 74  Q
    |||||||||||||| |||| | ||| |||||||| |||| |||||||||| || |||||||  |||||||    
T  35967480 cattcattaaatgatgtatgtggtccatattattaaccacatacatcattaaacgaatgaatctaaaaaa 35967411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 47787989 - 47787948
Alignment:
Q  178 acttttcaatataatattaattacttttttcattttataact 219  Q
    ||||||||||| ||||||||||||||||||  ||||||||||    
T  47787989 acttttcaatacaatattaattactttttttcttttataact 47787948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 206
Target Start/End: Complemental strand, 48400777 - 48400744
Alignment:
Q  173 atttcacttttcaatataatattaattacttttt 206  Q
    |||||||||||||||| |||||||||||||||||    
T  48400777 atttcacttttcaatacaatattaattacttttt 48400744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 2906645 - 2906681
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttca 209  Q
    ||||||||||||||||||| |||||||| ||||||||    
T  2906645 atttcacttttcaatataacattaattatttttttca 2906681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 3503203 - 3503167
Alignment:
Q  172 tatttcacttttcaatataatattaattacttttttc 208  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  3503203 tatttcacttttcaatacaatattaattatttttttc 3503167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 7695170 - 7695238
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | ||| |||||||  |||| |||||||||| ||||||||||| ||||||    
T  7695170 cattcatttaatgatgtatgtggtccatattatgaaccacatacatcattaaatgaatgaacctaaaaa 7695238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 15641264 - 15641332
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | |||||||||||  || | |||||||||| ||||||||||| ||||||    
T  15641264 cattcatttaatgatgtatatggtctatattatgaactacatacatcattaaatgaatgaacctaaaaa 15641332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 18328033 - 18327965
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | ||| |||||||  |||| |||||||||| ||||||||||| ||||||    
T  18328033 cattcatttaatgatgtatgtggtccatattatgaaccatatacatcattaaatgaatgaacctaaaaa 18327965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 18437366 - 18437434
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | ||| |||||||  |||| |||||||||| ||||||||||| ||||||    
T  18437366 cattcatttaatgatgtatgtggtccatattatgaaccatatacatcattaaatgaatgaacctaaaaa 18437434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 31860750 - 31860690
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaa 65  Q
    |||||||| ||||| |||| | |||||||||||  |||| |||||||||| ||||||||||    
T  31860750 cattcatttaatgacgtatgtggtctatattatgaaccacatacatcattaaatgaatgaa 31860690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 34709616 - 34709684
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | ||| |||||||  |||| |||||||||| ||||||||||| ||||||    
T  34709616 cattcatttaatgatgtatgtggtccatattatgaaccacatacatcattaaatgaatgaacctaaaaa 34709684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 36235777 - 36235709
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | ||| |||||||  |||| |||||||||  ||||||||||||||||||    
T  36235777 cattcatttaatgatgtatgtggtccatattatgaaccacatacatcataaaatgaatgaacttaaaaa 36235709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 41710293 - 41710245
Alignment:
Q  171 ctatttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||||||| |  ||||||||||||||||  |||||||||    
T  41710293 ctatttcacttttcaatacatcattaattacttttttccctttataact 41710245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 42911714 - 42911646
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | || ||||||||  |||| |||||||||| ||||||||||| ||||||    
T  42911714 cattcatttaatgatgtatatggtgtatattataaaccacatacatcattaaatgaatgaacctaaaaa 42911646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 47628380 - 47628312
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||  ||||| |||| ||||| |||||||  |||| |||||||||| ||||||||||| ||||||    
T  47628380 cattcatataatgatgtatgtagtccatattatgaaccagatacatcattaaatgaatgaacctaaaaa 47628312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 51126146 - 51126214
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||| | ||||| |||| | ||||||||||| ||||| |||||||||| | ||||||||| ||||||    
T  51126146 cattcaattaatgatgtatgtggtctatattatagaccacatacatcattaattgaatgaacctaaaaa 51126214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 100)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 29043495 - 29043574
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttg 84  Q
    |||||| ||||||| |||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||    
T  29043495 cattcaataaatgacgtatttagtctatatttttgaccaaatacatcatttattgaatgaacctaaaaaattgatttttg 29043574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 50308727 - 50308638
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||| |||||| |||||| ||||||||||||||||| ||||||||||| ||  |||||| |||||||||| |||||||||    
T  50308727 cattcattaaatgatgtatttggtctatgttattgaccaaatacataatttaatgaataaatctaaaaagttgatttttgcttataatag 50308638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 28038926 - 28038838
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||  |||||| || ||||||| ||||||||    
T  28038926 catttattaaatgatgtatttagtttatattattgaccaaatacaacatttaatgaatgaatctaaaaagttaatttttgcttataata 28038838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 15290619 - 15290692
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattga 78  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||  |||||| ||||    
T  15290619 cattcattaaatgatgtatttagtctatattattgaccaaatacatcatttattaaatgaatctaaaaagttga 15290692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 14891830 - 14891748
Alignment:
Q  12 taaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||| |||| | |||| |||||| ||||| |||||||||||||||||||| ||||||| |||||||||| ||||||||||    
T  14891830 taaatgatgtatatggtctttattatagaccatatacatcatttaatgaatgatcttaaaatattgatttttctttataatag 14891748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 34953995 - 34953906
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| | ||||| |||| | |||| |||||| ||||| ||||||||||||||||||||| |||||| ||||||||||| |||||||||    
T  34953995 cattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaatgaatttaaaatattgatttttgcttataatag 34953906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 41007776 - 41007691
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttata 90  Q
    |||||||||||||| |||| | |||| |||||| ||||| |||||||||||||||||| || |||||| ||||||||||| |||||    
T  41007776 cattcattaaatgatgtatgtggtctttattatagaccacatacatcatttaatgaataaatttaaaatattgatttttgcttata 41007691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 50308670 - 50308758
Alignment:
Q  6 attcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||||||| | |||||| ||| |||  || ||||||||||||||||||||||||||||||||||  ||| |||||| |||||||||    
T  50308670 attcattaaattatgtatttggtcaataacatagaccaaatacatcatttaatgaatgaacttaaaatgttggtttttgcttataatag 50308758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 5442282 - 5442346
Alignment:
Q  154 gtcttaaaagaactgaactatttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||| |||| |||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  5442282 gtctcaaaataactgagctatttcacttttcaatataa-attaattacttttttccttttataact 5442346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 24981882 - 24981971
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||| |||| |||||| ||||||  |||  |||||||||||||||||||||  |||||  |||||||||| |||||||||    
T  24981882 cattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatag 24981971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 46906960 - 46906871
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||| |||| |||||| ||||||  |||  |||||||||||||||||||||  ||||| || |||||||| |||||||||    
T  46906960 cattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatctaaaatatagatttttgcttataatag 46906871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 48242738 - 48242689
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataacttta 222  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  48242738 atttcacttttcaatacaatattaattacttttttctttttataacttta 48242689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 27864497 - 27864549
Alignment:
Q  42 caaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||||||||||| ||||||||| |||||||||||||||| ||||||||||    
T  27864497 caaatacatcatttattgaatgaacctaaaaaattgatttttatttataatag 27864549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 6156699 - 6156644
Alignment:
Q  39 gaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||||||| ||||||||  |||||| ||||||||||||||||||||    
T  6156699 gaccaaatacatcatttattgaatgaatctaaaaagttgatttttgtttataatag 6156644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 14890275 - 14890208
Alignment:
Q  27 gtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||| |||||| |||||  ||||||||||||||||||||||| ||| |||||||||| ||||||||||    
T  14890275 gtctttattatagaccatttacatcatttaatgaatgaacttgaaatattgatttttctttataatag 14890208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 9676058 - 9675976
Alignment:
Q  12 taaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||| ||||||||||||||| |||||| |||||||| ||||| | ||||||| |||||| || ||||||  |||||||||    
T  9676058 taaatgatgtatttagtctatataattgactaaatacattatttattaaatgaacctaaaaagttaatttttacttataatag 9675976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 38149405 - 38149475
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaat 75  Q
    |||||||| ||||| |||| |||| |||| ||| ||||| |||||||||| ||||||||||||||||||||    
T  38149405 cattcatttaatgatgtatatagtttataatatggaccacatacatcattaaatgaatgaacttaaaaaat 38149475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 48083576 - 48083514
Alignment:
Q  32 tattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| ||||| |||||||||||||||||||||| ||||| ||| ||||||| |||||||||    
T  48083576 tattatagaccacatacatcatttaatgaatgaacctaaaatattaatttttgcttataatag 48083514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 705511 - 705462
Alignment:
Q  159 aaaagaactgaactatttcacttttcaatataatattaattacttttttc 208  Q
    ||||||| ||| |||||||||||||||||||||||||||||| |||||||    
T  705511 aaaagaattgatctatttcacttttcaatataatattaattatttttttc 705462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 28038868 - 28038957
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||  |||||| ||| ||| |||  || |||||||||||||||| ||||||  |||||| |||||||||| |||||||||    
T  28038868 cattcattaaatgttgtatttggtcaataatataaactaaatacatcatttaataaatgaatctaaaaagttgatttttgcttataatag 28038957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 31798376 - 31798413
Alignment:
Q  171 ctatttcacttttcaatataatattaattacttttttc 208  Q
    ||||||||||||||||||||||||||||||||||||||    
T  31798376 ctatttcacttttcaatataatattaattacttttttc 31798413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 38847401 - 38847317
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttata 90  Q
    |||||||| ||||| |||| | || |||| ||| ||||| |||||||||| ||||||||||||||||||||| ||||||| |||||    
T  38847401 cattcatttaatgatgtatgtggtttataatatagaccacatacatcattaaatgaatgaacttaaaaaatt-atttttgcttata 38847317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 11989408 - 11989340
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||||||||| |||| |||||| |||||| ||| | |||| ||||||||||||||||| ||||||    
T  11989408 cattcattaaatgatgtatgtagtctttattatagactacatacgtcatttaatgaatgaacctaaaaa 11989340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 15311571 - 15311503
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| |||| |||| ||| ||||| |||||||||| ||||||||||||||||||    
T  15311571 cattcatttaatgatgtatgtagtttataatatggaccacatacatcattaaatgaatgaacttaaaaa 15311503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 41007719 - 41007807
Alignment:
Q  6 attcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||||||||| |||| | ||||||| ||  ||||| |||||||||||||||||||||  |||||  |||| ||||| |||||||||    
T  41007719 attcattaaatgatgtatgtggtctataataaagaccacatacatcatttaatgaatgaatctaaaatgttgaattttgcttataatag 41007807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 27698772 - 27698818
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||||| |||||||||||||||||||  |||||||||    
T  27698772 atttcacttttcaatacaatattaattacttttttccctttataact 27698818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 7918886 - 7918813
Alignment:
Q  12 taaatgaggtatttagtctatattattgaccaaatacatcattt-aatgaatgaacttaaaaaattgatttttg 84  Q
    ||||||| |||||| || |||| ||||||| || |||||||||| ||||||| |||||||||| ||||||||||    
T  7918886 taaatgatgtatttggtttatactattgactaattacatcatttaaatgaatcaacttaaaaatttgatttttg 7918813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 19533067 - 19533018
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataacttta 222  Q
    |||| ||||||||||| |||||||||||||||||||  ||||||||||||    
T  19533067 attttacttttcaatacaatattaattacttttttccctttataacttta 19533018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 37643388 - 37643441
Alignment:
Q  155 tcttaaaagaactgaactatttcacttttcaatataatattaattacttttttc 208  Q
    |||||||| ||||||  |||||||||||| |||| |||||||||||||||||||    
T  37643388 tcttaaaataactgacttatttcactttttaataaaatattaattacttttttc 37643441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 52830561 - 52830512
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataacttta 222  Q
    |||||||||||||||| |||||||||||||||||||  ||||||| ||||    
T  52830561 atttcacttttcaatacaatattaattacttttttctctttataatttta 52830512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 8773184 - 8773232
Alignment:
Q  159 aaaagaactgaactatttcacttttcaatataatattaattactttttt 207  Q
    |||| |||||| |||||||| ||||||||| ||||||||||||||||||    
T  8773184 aaaataactgagctatttcatttttcaatagaatattaattactttttt 8773232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 10370349 - 10370289
Alignment:
Q  159 aaaagaactgaactatttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||| |||||| |||||||||||| ||||| ||||||||||| |||||||  |||||||||    
T  10370349 aaaataactgagctatttcactttccaatacaatattaattatttttttccctttataact 10370289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 11989350 - 11989410
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaa 65  Q
    |||||||||||||| |||| ||||||||| ||  ||| | |||||||||||||||||||||    
T  11989350 cattcattaaatgacgtatgtagtctataataaagactacatacatcatttaatgaatgaa 11989410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 14967267 - 14967355
Alignment:
Q  6 attcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||||||||| |||| | | ||||| ||  || || |||||||||||||||||||||  |||||  |||||||||| |||||||||    
T  14967267 attcattaaatgatgtatgtggcctataataaagatcacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatag 14967355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 15290448 - 15290484
Alignment:
Q  171 ctatttcacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||||| ||||||||||||||||||    
T  15290448 ctatttcacttttcaatacaatattaattactttttt 15290484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 22954871 - 22954803
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | ||| |||||||  |||| |||||||||| ||||||||||||||||||    
T  22954871 cattcatttaatgatgtatgtggtccatattataaaccacatacatcattaaatgaatgaacttaaaaa 22954803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 29070716 - 29070648
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||| ||||||| |||| | ||| ||||||| ||||| |||||||||||| ||||||||| ||||||    
T  29070716 cattcaataaatgatgtatgtggtccatattatagaccacatacatcatttattgaatgaacataaaaa 29070648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 31327666 - 31327598
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | |||||||||||  |||| |||||||||| ||||||||||| ||||||    
T  31327666 cattcatttaatgatgtatgtggtctatattatgaaccatatacatcattaaatgaatgaacctaaaaa 31327598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 38847343 - 38847411
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | |||||||||||  |||| |||||||||| ||||||||||| ||||||    
T  38847343 cattcatttaatgatgtatgtggtctatattataaaccacatacatcattaaatgaatgaacctaaaaa 38847411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 42761332 - 42761264
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | |||||||||||  |||| |||||||||| ||||||||||| ||||||    
T  42761332 cattcatttaatgatgtatgtggtctatattatgaaccacatacatcattaaatgaatgaacctaaaaa 42761264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 45925285 - 45925353
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | |||||||||||  |||| |||||||||| ||||||||||| ||||||    
T  45925285 cattcatttaatgatgtatgtggtctatattatgaaccacatacatcattaaatgaatgaacctaaaaa 45925353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 47912671 - 47912603
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | ||| |||||||| |||| |||||||||| ||||||||||| ||||||    
T  47912671 cattcatttaatgatgtatgtggtccatattattaaccacatacatcattaaatgaatgaacctaaaaa 47912603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 1602892 - 1602947
Alignment:
Q  39 gaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||| ||||| |||||||||||||||| ||||||||  ||||||| |||||||||    
T  1602892 gaccacatacaacatttaatgaatgaacctaaaaaatgaatttttgcttataatag 1602947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 2122644 - 2122699
Alignment:
Q  39 gaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||| ||||| |||||||||||||||  |||||||| |||||||| |||||||||    
T  2122644 gaccacatacaacatttaatgaatgaatctaaaaaatggatttttgcttataatag 2122699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 2219601 - 2219562
Alignment:
Q  167 tgaactatttcacttttcaatataatattaattacttttt 206  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  2219601 tgaaccatttcacttttcaatacaatattaattacttttt 2219562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 208
Target Start/End: Original strand, 2886131 - 2886166
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttc 208  Q
    |||||||||||||||| |||||||||||||||||||    
T  2886131 atttcacttttcaatacaatattaattacttttttc 2886166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 6784963 - 6785006
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttata 216  Q
    |||||||||||||||| ||||||||||||||||||  |||||||    
T  6784963 atttcacttttcaatacaatattaattactttttttcttttata 6785006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 15290670 - 15290603
Alignment:
Q  12 taaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgat 79  Q
    ||||||| |||||| ||| ||| ||| ||| |||||||||||||||||||||||| || ||| |||||    
T  15290670 taaatgatgtatttggtcaataatatagactaaatacatcatttaatgaatgaacctacaaagttgat 15290603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 17342767 - 17342822
Alignment:
Q  152 gtgtcttaaaagaactgaactatttcacttttcaatataatattaattactttttt 207  Q
    |||||| |||| ||||||  ||||||||||||||||| ||||||||||||| ||||    
T  17342767 gtgtctcaaaataactgagttatttcacttttcaatacaatattaattactatttt 17342822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 26158769 - 26158718
Alignment:
Q  43 aaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||  |||||||||||||||| || ||||||| |||||||||    
T  26158769 aaatacatcatttgttgaatgaacttaaaaagttaatttttgcttataatag 26158718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 26172067 - 26172016
Alignment:
Q  43 aaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||  |||||||||||||||| || ||||||| |||||||||    
T  26172067 aaatacatcatttgttgaatgaacttaaaaagttaatttttgcttataatag 26172016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 29070658 - 29070725
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaa 72  Q
    |||||| ||||||| |||| | ||||||| ||| ||||| |||||||||||| ||||||||| |||||    
T  29070658 cattcaataaatgatgtatgtggtctataatatggaccacatacatcatttattgaatgaacctaaaa 29070725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 30749714 - 30749761
Alignment:
Q  172 tatttcacttttcaatataatattaattacttttttcattttataact 219  Q
    ||||||| ||||||||| |||||||||||||||||||  |||||||||    
T  30749714 tatttcatttttcaatacaatattaattacttttttctctttataact 30749761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 30771165 - 30771212
Alignment:
Q  172 tatttcacttttcaatataatattaattacttttttcattttataact 219  Q
    ||||||| ||||||||| |||||||||||||||||||  |||||||||    
T  30771165 tatttcatttttcaatacaatattaattacttttttctctttataact 30771212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 51049453 - 51049508
Alignment:
Q  157 ttaaaagaactgaactatttcacttttcaatataatattaattacttttttcattt 212  Q
    |||||| || ||| ||||||||||||| |||| |||||||||||||||||| ||||    
T  51049453 ttaaaataattgagctatttcactttttaatacaatattaattactttttttattt 51049508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 3549842 - 3549908
Alignment:
Q  27 gtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    |||| |||||| ||||| |||||| |||||||||||||| ||||||  || ||||||| ||||||||    
T  3549842 gtctttattatagaccacatacattatttaatgaatgaatttaaaatgttaatttttgcttataata 3549908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 10008920 - 10008850
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaat 75  Q
    |||| ||| ||||| |||| || || |||||||| |||| |||||||||| ||||||||||| ||||||||    
T  10008920 catttatttaatgatgtatgtaatccatattattaaccacatacatcattaaatgaatgaacctaaaaaat 10008850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 14885391 - 14885329
Alignment:
Q  32 tattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| ||||| |||||| ||||||||||| || ||||||  ||||||||| ||||||||||    
T  14885391 tattatagaccacatacataatttaatgaataaatttaaaatgttgatttttttttataatag 14885329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 14885549 - 14885487
Alignment:
Q  32 tattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| ||||| |||||| ||||||||||| || ||||||  ||||||||| ||||||||||    
T  14885549 tattatagaccacatacataatttaatgaataaatttaaaatgttgatttttttttataatag 14885487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 29756292 - 29756258
Alignment:
Q  173 atttcacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||| ||||||||||||||||||    
T  29756292 atttcacttttcaatacaatattaattactttttt 29756258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 33149232 - 33149270
Alignment:
Q  171 ctatttcacttttcaatataatattaattacttttttca 209  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  33149232 ctatttcacttttcaatgcaatattaattacttttttca 33149270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 33765837 - 33765915
Alignment:
Q  14 aatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataat 92  Q
    ||||| |||| | |||| |||||| ||||| |||||||||||||| ||||||  |||||  |||||||||| |||||||    
T  33765837 aatgatgtatatggtctttattatagaccacatacatcatttaataaatgaatctaaaatgttgatttttgcttataat 33765915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 35544631 - 35544553
Alignment:
Q  6 attcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttg 84  Q
    ||||||||||||  |||| | ||||  ||||| ||||| ||||||||||||| ||||||| ||||||  ||||||||||    
T  35544631 attcattaaatggtgtatgtggtcttcattatagaccacatacatcatttaacgaatgaatttaaaatgttgatttttg 35544553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 36467343 - 36467297
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||||| ||||||||||||||||| |  |||||||||    
T  36467343 atttcacttttcaatacaatattaattactttttcccctttataact 36467297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 36784274 - 36784308
Alignment:
Q  173 atttcacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||| ||||||||||||||||||    
T  36784274 atttcacttttcaatacaatattaattactttttt 36784308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 37925414 - 37925360
Alignment:
Q  153 tgtcttaaaagaactgaactatttcacttttcaatataatattaattactttttt 207  Q
    |||||||||| || ||| | |||| ||||||||||| ||||||||||||||||||    
T  37925414 tgtcttaaaaaaattgaccaattttacttttcaatacaatattaattactttttt 37925360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 39362877 - 39362935
Alignment:
Q  32 tattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttata 90  Q
    |||||| ||||| |||| ||||||||| ||||||  ||||| |||||||||||||||||    
T  39362877 tattatagaccacatacttcatttaataaatgaatctaaaatattgatttttgtttata 39362935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 49944751 - 49944796
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    ||||||| |||||||| ||||||||||||||||||| ||||||||||    
T  49944751 atttcacctttcaatacaatattaattacttttttc-ttttataact 49944796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 50550187 - 50550249
Alignment:
Q  32 tattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| || || |||||||||||||||||||||  |||||  ||||||||| ||||||||||    
T  50550187 tattatagatcacatacatcatttaatgaatgaatctaaaatgttgatttttctttataatag 50550249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 52432272 - 52432318
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||| ||||||||||| ||||||||||||||||||  ||||||||||    
T  52432272 attttacttttcaatacaatattaattactttttttcttttataact 52432318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 1859467 - 1859515
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataacttta 222  Q
    |||||||||||||||| ||||||||||| ||||||||  |||||||||||    
T  1859467 atttcacttttcaatacaatattaattatttttttca-attataacttta 1859515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 206
Target Start/End: Complemental strand, 14358154 - 14358121
Alignment:
Q  173 atttcacttttcaatataatattaattacttttt 206  Q
    |||||||||||||||| |||||||||||||||||    
T  14358154 atttcacttttcaatacaatattaattacttttt 14358121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 14967324 - 14967235
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||| |||| |  ||| |||||| | ||| |||||||||||||||||| ||  |||||  |||||||||| |||| ||||    
T  14967324 cattcattaaatgatgtatgtgatctttattataggccacatacatcatttaatgaataaatgtaaaatgttgatttttgcttatgatag 14967235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 16451591 - 16451640
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataacttta 222  Q
    |||||||||||||||| || ||||||||||||||||   |||||||||||    
T  16451591 atttcacttttcaatacaacattaattacttttttccaattataacttta 16451640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 16460744 - 16460793
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataacttta 222  Q
    |||||||||||||||| || ||||||||||||||||   |||||||||||    
T  16460744 atttcacttttcaatacaacattaattacttttttccaattataacttta 16460793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 19175629 - 19175718
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| ||||||| |||| | |||||| | ||  |||| |||||||||||| ||||||||  |||||| | |||||||| |||||||||    
T  19175629 cattcaataaatgatgtatgtggtctatttaatgaaccacatacatcatttattgaatgaatctaaaaagtagatttttgcttataatag 19175718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 34953937 - 34954026
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||| |||| | ||||||| ||  ||||| |||||||||| | ||||||||  ||||| ||  ||||||| |||||||||    
T  34953937 cattcattaaatgatgtatgtggtctataataaagaccatatacatcattaattgaatgaatctaaaatataaatttttgcttataatag 34954026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 38834659 - 38834712
Alignment:
Q  12 taaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaa 65  Q
    ||||||| |||| |||||||||| | |||||| |||||||||||| ||||||||    
T  38834659 taaatgatgtatatagtctatataaatgaccatatacatcatttattgaatgaa 38834712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 206
Target Start/End: Original strand, 43895807 - 43895840
Alignment:
Q  173 atttcacttttcaatataatattaattacttttt 206  Q
    |||||||||||||||| |||||||||||||||||    
T  43895807 atttcacttttcaatacaatattaattacttttt 43895840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 47991853 - 47991808
Alignment:
Q  28 tctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||||| ||||| |||||||||| ||||||||||| ||||||    
T  47991853 tctatattatggaccacatacatcattaaatgaatgaacctaaaaa 47991808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 49494310 - 49494262
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataacttta 222  Q
    |||||||||||||||| | |||||||||||||||||  ||||||||||||    
T  49494310 atttcacttttcaatacactattaattacttttttc-ctttataacttta 49494262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 50155350 - 50155403
Alignment:
Q  12 taaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaa 65  Q
    ||||||| |||||| ||||||||||| |||||||||||||| ||| | ||||||    
T  50155350 taaatgatgtatttggtctatattatagaccaaatacatcaattactcaatgaa 50155403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 52923404 - 52923453
Alignment:
Q  45 atacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||| ||||||||| |||||| | |||||||| |||||||||    
T  52923404 atacatcatttattgaatgaacctaaaaagtagatttttgcttataatag 52923453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 435247 - 435315
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | || |||| ||| ||||| |||||||||| ||||||||||| ||||||    
T  435247 cattcatttaatgatgtatgtggtttataatatggaccacatacatcattaaatgaatgaacctaaaaa 435315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 5115973 - 5115937
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttca 209  Q
    ||||||||||||||||||| || ||||||||||||||    
T  5115973 atttcacttttcaatataacatcaattacttttttca 5115937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 6169860 - 6169920
Alignment:
Q  14 aatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaa 74  Q
    ||||| |||| ||||| ||| |||| |||| |||||||||| | |||||||||||||||||    
T  6169860 aatgatgtatgtagtcaataatattaaccacatacatcattaattgaatgaacttaaaaaa 6169920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 7230126 - 7230170
Alignment:
Q  31 atattattgaccaaatacatcatttaatgaatgaacttaaaaaat 75  Q
    ||||||| ||||| |||||||||| | ||||||||||||||||||    
T  7230126 atattatggaccacatacatcattaattgaatgaacttaaaaaat 7230170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 17387749 - 17387681
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | || |||| ||| ||||| |||||||||| ||||||||||| ||||||    
T  17387749 cattcatttaatgatgtatgtggtttataatatggaccacatacatcattaaatgaatgaacctaaaaa 17387681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 19161518 - 19161554
Alignment:
Q  171 ctatttcacttttcaatataatattaattactttttt 207  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  19161518 ctatttcactttttaatataatattaattaatttttt 19161554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 22954813 - 22954881
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | || |||| ||| ||||| |||||||||| ||||||||||| ||||||    
T  22954813 cattcatttaatgatgtatgtggtttataatatggaccacatacatcattaaatgaatgaacctaaaaa 22954881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 24131549 - 24131513
Alignment:
Q  172 tatttcacttttcaatataatattaattacttttttc 208  Q
    ||||||||||||||||  |||||||||||||||||||    
T  24131549 tatttcacttttcaatgcaatattaattacttttttc 24131513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 26040479 - 26040411
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||  ||||| |||| ||||| |||||||  |||| |||||||||| ||||||||||| ||||||    
T  26040479 cattcatataatgatgtatgtagtccatattatgaaccacatacatcattaaatgaatgaacctaaaaa 26040411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 29374117 - 29374157
Alignment:
Q  52 atttaatgaatgaacttaaaaaattgatttttgtttataat 92  Q
    |||||||||||||||||||||||| || |||| ||||||||    
T  29374117 atttaatgaatgaacttaaaaaatagagttttatttataat 29374157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 32347902 - 32347950
Alignment:
Q  171 ctatttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||||||| |  ||||||||||||||||  |||||||||    
T  32347902 ctatttcacttttcaatacatcattaattacttttttccctttataact 32347950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 34877252 - 34877204
Alignment:
Q  158 taaaagaactgaactatttcacttttcaatataatattaattacttttt 206  Q
    ||||| |||||||  |||| ||||||||||| |||||||||||||||||    
T  34877252 taaaataactgaatcattttacttttcaatacaatattaattacttttt 34877204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 41161533 - 41161573
Alignment:
Q  32 tattattgaccaaatacatcatttaatgaatgaacttaaaa 72  Q
    |||||| ||||| |||||||||| |||||||||||||||||    
T  41161533 tattatagaccacatacatcattaaatgaatgaacttaaaa 41161573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 41563038 - 41563106
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||| ||||||| |||| ||||| |||||||  |||| |||||||||||| ||| ||||| ||||||    
T  41563038 cattcaataaatgatgtatgtagtccatattataaaccacatacatcatttattgagtgaacctaaaaa 41563106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 42761274 - 42761342
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | ||  ||| ||| ||||| |||||||||| ||||||||||||||||||    
T  42761274 cattcatttaatgatgtatgtggttcataatatagaccacatacatcattaaatgaatgaacttaaaaa 42761342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 46536279 - 46536335
Alignment:
Q  152 gtgtcttaaaagaactgaactatttcacttttcaatataatattaattacttttttc 208  Q
    |||||| |||| ||||||   |||||||||||||||| |||||||||||| ||||||    
T  46536279 gtgtctcaaaataactgagtcatttcacttttcaatacaatattaattacatttttc 46536335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 208
Target Start/End: Complemental strand, 50773475 - 50773447
Alignment:
Q  180 ttttcaatataatattaattacttttttc 208  Q
    |||||||||||||||||||||||||||||    
T  50773475 ttttcaatataatattaattacttttttc 50773447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 51; Significance: 2e-20; HSPs: 3)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 36953 - 36875
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgattttt 83  Q
    |||||||||||||| ||||||  ||||| ||||||||||||||||||||||||||||||||  |||||| |||||||||    
T  36953 cattcattaaatgatgtatttgatctatgttattgaccaaatacatcatttaatgaatgaatctaaaaagttgattttt 36875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 36895 - 36983
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    |||||||||||||| |||||| ||| |||  || || ||||||||||||||||||||||||  |||||  |||||||||||||||||||    
T  36895 cattcattaaatgatgtatttggtcaataacatagatcaaatacatcatttaatgaatgaatctaaaatgttgatttttgtttataata 36983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 39155 - 39238
Alignment:
Q  10 attaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    ||||||| | |||| || ||| |||||| ||||| |||||||||||||||||||||  |||||  |||||||||| ||||||||    
T  39155 attaaataatgtatatattctttattatagaccatatacatcatttaatgaatgaatctaaaattttgatttttgcttataata 39238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 9e-20; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 16121006 - 16121095
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| ||||||| ||| || |||||||||||||||||||||||||||||| | ||||||  |||||| |||||||||| |||||||||    
T  16121006 cattcaataaatgatgtacttggtctatattattgaccaaatacatcatttatttaatgaatctaaaaagttgatttttgcttataatag 16121095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 15517131 - 15517219
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    |||||||||||||| |||| | |||| |||||| ||||| |||||||||||||||||||||  ||||| ||||||||||| ||||||||    
T  15517131 cattcattaaatgatgtatatcgtctttattatagaccacatacatcatttaatgaatgaatctaaaatattgatttttgcttataata 15517219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 3203712 - 3203801
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| | ||||| ||||  |||||||||| |||||||||||||||||||| | ||||||| |||||| |||||||||| |||||||||    
T  3203712 cattcaatgaatgatgtatcaagtctatattcttgaccaaatacatcatttattaaatgaacctaaaaagttgatttttgcttataatag 3203801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 34379776 - 34379865
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||| |||| | |||| |||||| ||||| |||||||||||||||||||||  |||||  |||||||||| |||||||||    
T  34379776 cattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatag 34379865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 219
Target Start/End: Original strand, 15081369 - 15081429
Alignment:
Q  159 aaaagaactgaactatttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||| |||||||| |||||||||||||||| |||||||||||||||||||  |||||||||    
T  15081369 aaaataactgaacaatttcacttttcaatacaatattaattacttttttccctttataact 15081429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 6797447 - 6797498
Alignment:
Q  43 aaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||| |||||||||||||||| |||||||||||||| ||||||||||||    
T  6797447 aaatacaacatttaatgaatgaacctaaaaaattgatttgtgtttataatag 6797498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 6797467 - 6797378
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||  ||||||||| ||||||||||| ||||||||| ||||| | ||| || || |||| |||| ||||| |||||||||    
T  6797467 cattcattaaatgttgtatttagtttatattattgagcaaatacattatttatttaataaattttaaaagttgacttttgcttataatag 6797378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 32254862 - 32254951
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||| |||||||| |||| ||||||||| ||  ||||| |||||||||||||||||||||  ||||| ||| | ||||| |||||||||    
T  32254862 cattcgttaaatgatgtatgtagtctataataaagaccacatacatcatttaatgaatgaatctaaaatattaacttttgcttataatag 32254951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 14173431 - 14173491
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaa 65  Q
    |||||| ||||||| |||| ||||||||| ||||||||| |||||||||||| ||||||||    
T  14173431 cattcaataaatgaagtatgtagtctataatattgaccacatacatcatttattgaatgaa 14173491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 14177967 - 14178027
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaa 65  Q
    |||||| ||||||| |||| ||||||||| ||||||||| |||||||||||| ||||||||    
T  14177967 cattcaataaatgaagtatgtagtctataatattgaccacatacatcatttattgaatgaa 14178027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 34170155 - 34170088
Alignment:
Q  27 gtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||| ||| || || |||||||||||||||||||||  |||||  ||||||||||||||||||||    
T  34170155 gtctataatatagatcacatacatcatttaatgaatgaatctaaaatgttgatttttgtttataatag 34170088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 3203730 - 3203681
Alignment:
Q  45 atacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||| | ||||||||| ||||||||||||||||| |||||||||    
T  3203730 atacatcattcattgaatgaacctaaaaaattgatttttgcttataatag 3203681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 11174120 - 11174059
Alignment:
Q  33 attattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||| || ||||||||| ||||||| ||||||  |||||||||||||||| ||||||||||    
T  11174120 attatagatcaaatacataatttaataaatgaatctaaaaaattgatttttatttataatag 11174059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 13462974 - 13463062
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| ||||||| |||| || ||||||| ||  |||| |||||||||||||||||||||| |||||| |  ||||||| |||||||||    
T  13462974 cattcaataaatgatgtatgtaatctatat-ataaaccacatacatcatttaatgaatgaacctaaaaagtcaatttttgcttataatag 13463062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 25371103 - 25371019
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttata 90  Q
    |||||||| ||||| |||| | ||| |||||||  |||| |||||||||| |||||||||||||| |||| ||| |||||||||||    
T  25371103 cattcatttaatgatgtatgtggtccatattatgaaccacatacatcattaaatgaatgaactta-aaaagtgaattttgtttata 25371019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 26527231 - 26527320
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||| |||| | |||| |||||| ||||||  |||| |||||||||||||||||||||  |||||  || ||||||| |||||||||    
T  26527231 cattcataaaataatgtatgtagtctttattataaaccacatacatcatttaatgaatgaatctaaaatgttaatttttgcttataatag 26527320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 20704113 - 20704033
Alignment:
Q  14 aatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||| |||| | |||| |||||| ||||| ||| || ||| |||||||||| |||||| ||||||||||| |||||||||    
T  20704113 aatgatgtatatggtctttattatagaccacatatattattgaatgaatgaatttaaaatattgatttttgattataatag 20704033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 208
Target Start/End: Complemental strand, 9755293 - 9755258
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttc 208  Q
    |||||||||||||||| |||||||||||||||||||    
T  9755293 atttcacttttcaatacaatattaattacttttttc 9755258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 208
Target Start/End: Original strand, 15325107 - 15325142
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttc 208  Q
    ||||||||||||||||| ||||||||||||||||||    
T  15325107 atttcacttttcaatattatattaattacttttttc 15325142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 207
Target Start/End: Original strand, 31723453 - 31723488
Alignment:
Q  172 tatttcacttttcaatataatattaattactttttt 207  Q
    ||||||||||||||||| ||||||||||||||||||    
T  31723453 tatttcacttttcaatacaatattaattactttttt 31723488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 2310435 - 2310401
Alignment:
Q  173 atttcacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||| ||||||||||||||||||    
T  2310435 atttcacttttcaatacaatattaattactttttt 2310401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 3604747 - 3604701
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||||| ||||||||||| |||||||  |||||||||    
T  3604747 atttcacttttcaatacaatattaattatttttttccctttataact 3604701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 4552862 - 4552896
Alignment:
Q  173 atttcacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||| ||||||||||||||||||    
T  4552862 atttcacttttcaatacaatattaattactttttt 4552896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 7301227 - 7301181
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||||| ||||||||||| |||||||  |||||||||    
T  7301227 atttcacttttcaatacaatattaattatttttttccctttataact 7301181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 15351530 - 15351496
Alignment:
Q  173 atttcacttttcaatataatattaattactttttt 207  Q
    ||||||||||||||||| |||||||||||||||||    
T  15351530 atttcacttttcaatattatattaattactttttt 15351496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 16199204 - 16199130
Alignment:
Q  20 gtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||| |||||| ||||||  |||  |||||||||||||||||||||| |||||  | |||||||| |||||||||    
T  16199204 gtatgtagtctgtattataaaccgcatacatcatttaatgaatgaacctaaaatgtagatttttgcttataatag 16199130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 18886380 - 18886318
Alignment:
Q  32 tattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| ||||| ||| |||||||||||||||||  ||||| ||| ||||||| |||||||||    
T  18886380 tattatagaccacatatatcatttaatgaatgaatctaaaatattaatttttgcttataatag 18886318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 30064096 - 30064050
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||| ||||| |||||||||||||||||||  |||||||||    
T  30064096 atttcactttccaatacaatattaattacttttttccctttataact 30064050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 31996567 - 31996629
Alignment:
Q  32 tattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| ||| | |||||||||||||| ||||||| |||||  |||||||||| |||||||||    
T  31996567 tattatagactacatacatcatttaataaatgaacctaaaatgttgatttttgcttataatag 31996629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 12104804 - 12104755
Alignment:
Q  45 atacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||| |||||| ||||||  |||||||||| |||||||||    
T  12104804 atacatcatttaataaatgaatttaaaatgttgatttttgcttataatag 12104755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 208
Target Start/End: Complemental strand, 15372012 - 15371975
Alignment:
Q  171 ctatttcacttttcaatataatattaattacttttttc 208  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  15372012 ctatttcacttttcaatattatatttattacttttttc 15371975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 16121057 - 16120996
Alignment:
Q  12 taaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    ||||||| |||||| ||| ||| ||| |||||| ||||||||||| |||||||| |||||||    
T  16121057 taaatgatgtatttggtcaataatatagaccaagtacatcatttattgaatgaatttaaaaa 16120996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 26597264 - 26597180
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttata 90  Q
    |||||||| ||||| |||| | ||| |||||||  |||| |||||||||| ||||||||||| | ||||| ||| |||||||||||    
T  26597264 cattcatttaatgatgtatgtggtccatattatgaaccacatacatcattaaatgaatgaacct-aaaaagtgaattttgtttata 26597180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 34441852 - 34441900
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataacttta 222  Q
    |||||||||||||||| || |||||||||||||||||  |||||||||||    
T  34441852 atttcacttttcaatacaacattaattacttttttca-attataacttta 34441900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 3199782 - 3199727
Alignment:
Q  40 accaaatacatcatttaatgaatgaacttaaaaaattga--tttttgtttataata 93  Q
    |||| ||||| ||||||||||||||| |||||| |||||  |||||||||||||||    
T  3199782 accacatacaacatttaatgaatgaatttaaaatattgatttttttgtttataata 3199727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 10118717 - 10118649
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | ||  ||||||| ||||| |||||||||| ||||||||||| ||||||    
T  10118717 cattcatttaatgatgtatgtggttcatattatggaccacatacatcattaaatgaatgaacctaaaaa 10118649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 15517189 - 15517129
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaa 65  Q
    |||||||||||||| |||| | ||||||| ||  ||| | |||||||||||||||||||||    
T  15517189 cattcattaaatgatgtatgtggtctataataaagacgatatacatcatttaatgaatgaa 15517129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 28034114 - 28034046
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | ||| |||||||  |||| |||||||||| ||||||||||| ||||||    
T  28034114 cattcatttaatgatgtatgtggtccatattatgaaccacatacatcattaaatgaatgaacctaaaaa 28034046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 30507048 - 30507108
Alignment:
Q  13 aaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||| |||| | |||||||||||  |||| |||||||||| ||||||||||| ||||||    
T  30507048 aaatgatgtatgtggtctatattatgaaccacatacatcattaaatgaatgaacctaaaaa 30507108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 29241579 - 29241491
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    |||||| ||||||| |||||| |||||||||| ||| ||||| ||||||||| | ||||||| ||||||||||||||||| ||||||||    
T  29241579 cattcaataaatgatgtatttggtctatattactgatcaaatgcatcatttattaaatgaacctaaaaaattgatttttgcttataata 29241491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 54595889 - 54595800
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||| |||| | |||| |||||| ||||| |||||||||||||||||||||  |||||  |||||||||| |||||||||    
T  54595889 cattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatag 54595800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 159 - 222
Target Start/End: Complemental strand, 46786142 - 46786079
Alignment:
Q  159 aaaagaactgaactatttcacttttcaatataatattaattacttttttcattttataacttta 222  Q
    |||| |||||| ||||||||||||| ||||||||||||||||||||||||  ||||||||||||    
T  46786142 aaaataactgagctatttcactttttaatataatattaattacttttttcgctttataacttta 46786079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 21296650 - 21296604
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||    
T  21296650 atttcacttttcaatacaatattaattacttttttccttttataact 21296604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 54008479 - 54008549
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaat 75  Q
    |||||||| ||||| |||||| || ||||||||  |||| |||||||||| ||||||||||||||||||||    
T  54008479 cattcatttaatgatgtatttggtttatattatgaaccacatacatcattaaatgaatgaacttaaaaaat 54008549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 331897 - 331809
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||||| |||| || ||| |||||| ||||| |||||||||||||| ||| || ||||||  |||||||||| |||||||||    
T  331897 cattcattaaatgatgtatataatctttattatagaccacatacatcatttaatcaat-aaattaaaatgttgatttttgcttataatag 331809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 10872731 - 10872682
Alignment:
Q  45 atacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||||||||||||||||| |||||| ||||||||||| |||||||||    
T  10872731 atacatcatttaatgaatgaatttaaaatattgatttttgcttataatag 10872682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 41031532 - 41031581
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataacttta 222  Q
    |||||||||||||||| |||||||||||||||||||  ||||||||||||    
T  41031532 atttcacttttcaatacaatattaattacttttttccatttataacttta 41031581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 50603594 - 50603643
Alignment:
Q  45 atacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||| |||||||||||||||||| |||||||| |||||||||    
T  50603594 atacatcatttattgaatgaacttaaaaaatagatttttgcttataatag 50603643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 21217264 - 21217176
Alignment:
Q  6 attcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||||||||| |||| |||||| ||||||  |||  |||||||||||||||||||||  |||||  | |||||||| |||||||||    
T  21217264 attcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatctaaaatgtagatttttgcttataatag 21217176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 25990691 - 25990774
Alignment:
Q  6 attcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttata 90  Q
    ||||||| ||||| |||| | |||||||||||  |||| |||||||||| ||||||||||| ||||||||| ||||||| |||||    
T  25990691 attcatttaatgatgtatgtggtctatattatgaaccacatacatcattaaatgaatgaacctaaaaaatt-atttttgcttata 25990774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 27224678 - 27224590
Alignment:
Q  6 attcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||||||||| |||| || | | |||||| || || |||||||||||||||||| ||  |||||  ||||||||||||||||||||    
T  27224678 attcattaaatgatgtatataatttttattatagatcacatacatcatttaatgaataaatctaaaatgttgatttttgtttataatag 27224590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 30578321 - 30578261
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaa 65  Q
    |||||||||||||| ||||  ||||| |||||||||||| |||||||||||||||| ||||    
T  30578321 cattcattaaatgatgtatacagtctttattattgaccatatacatcatttaatgagtgaa 30578261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 18409261 - 18409328
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaa 72  Q
    |||||| |||||||||||| ||||| ||||| | ||||| |||||||||||| ||||||||| |||||    
T  18409261 cattcaataaatgaggtatgtagtccatattttagaccacatacatcatttattgaatgaacctaaaa 18409328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 1772279 - 1772225
Alignment:
Q  153 tgtcttaaaagaactgaactatttcacttttcaatataatattaattactttttt 207  Q
    ||||| |||| |||||||| |||||| ||||||||| ||||||||||||||||||    
T  1772279 tgtctcaaaataactgaaccatttcatttttcaatacaatattaattactttttt 1772225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 20625303 - 20625249
Alignment:
Q  40 accaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||| |||||||||||||| |||||| ||||||  ||||||||||||||||||||    
T  20625303 accacatacatcatttaataaatgaatttaaaatgttgatttttgtttataatag 20625249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 26142866 - 26142912
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||| ||||||||||||||||||||||||||||||| | ||||||||    
T  26142866 attttacttttcaatataatattaattacttttttcctcttataact 26142912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 37897750 - 37897812
Alignment:
Q  32 tattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| ||||| |||||| |||||||||||||| ||||||  |||||||||| |||||||||    
T  37897750 tattatagaccacatacataatttaatgaatgaatttaaaatgttgatttttgcttataatag 37897812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 48191799 - 48191725
Alignment:
Q  20 gtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||| |||||| ||||||  |||| |||||||||||||||||||||  |||||  || |||||||||||||||||    
T  48191799 gtatgtagtctttattataaaccacatacatcatttaatgaatgaatctaaaatgttaatttttgtttataatag 48191725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 54122370 - 54122325
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||    
T  54122370 atttcacttttcaatataa-attaattacttttttccttttataact 54122325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 54273491 - 54273409
Alignment:
Q  12 taaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||| |||||||||  |||||||  ||||||||||||||||| | |||||||||||||  || | ||||| |||||||||    
T  54273491 taaatgacgtatttagttaatattatataccaaatacatcatttattcaatgaacttaaaactttaacttttgcttataatag 54273409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 13927436 - 13927520
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttata 90  Q
    |||||||| ||||| |||| | |||||||||||  |||| |||||||||| ||||||||||| | ||||| ||| |||||||||||    
T  13927436 cattcatttaatgatgtatgtggtctatattatgaaccacatacatcattaaatgaatgaacct-aaaaagtgaattttgtttata 13927520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 41254030 - 41253941
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||| ||||||||| |||| || | | ||||||  |||| |||||||||||||||||||||  |||||  |||||||||| |||||||||    
T  41254030 catttattaaatgatgtatgtaatatttattataaaccacatacatcatttaatgaatgaatataaaatgttgatttttgattataatag 41253941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 41743689 - 41743600
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| | ||||| |||| | |||| |||||| ||||| ||||||||||||||||| |||  ||||| ||| ||||||| |||||||||    
T  41743689 cattcagttaatgatgtatatggtctttattatagaccatatacatcatttaatgaacgaatctaaaatattaatttttgcttataatag 41743600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 42787657 - 42787745
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| |||||||  ||| |||||||||| ||  |||| | |||||||||| ||||||||| ||||||||  |||||||||||||||||    
T  42787657 cattcaataaatgatatatgtagtctatataataaaccaca-acatcatttattgaatgaacctaaaaaatgaatttttgtttataatag 42787745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 23444372 - 23444316
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaa 61  Q
    |||||||||||||| |||| |||||| ||||||| |||| |||||| ||||||||||    
T  23444372 cattcattaaatgatgtatatagtctttattattaaccacatacataatttaatgaa 23444316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 23489413 - 23489325
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    |||||||||||| | |||| |||||| ||||||| |||| ||| || ||||||||||||||  |||||   | ||||||||||||||||    
T  23489413 cattcattaaataatgtatatagtctttattattaaccacatatataatttaatgaatgaatataaaatgctaatttttgtttataata 23489325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 35455662 - 35455594
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | |||||||||||  |||| |||||||||| ||||||||||| ||||||    
T  35455662 cattcatttaatgatgtatgtggtctatattatgaaccacatacatcattaaatgaatgaacataaaaa 35455594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 36344472 - 36344384
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    |||||||||||||| |||| | |||| ||||||||| || ||| |||||||||||| ||||  |||||| | || |||| |||||||||    
T  36344472 cattcattaaatgatgtatgtggtctttattattgatcacatatatcatttaatgattgaatctaaaaagtagagttttatttataata 36344384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 40470459 - 40470519
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaa 65  Q
    |||||||||||||| |||| |||||| |||||| ||| | |||| ||||||||||||||||    
T  40470459 cattcattaaatgacgtatgtagtctttattatagactacatacgtcatttaatgaatgaa 40470519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 40639865 - 40639925
Alignment:
Q  34 ttattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||| ||||| |||||||||||||||||| || ||||||  |||||||||| |||||||||    
T  40639865 ttatagaccacatacatcatttaatgaataaatttaaaatgttgatttttgcttataatag 40639925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 44382911 - 44382851
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaa 65  Q
    ||||||||||||||  ||| |||||| ||||||  |||| |||||||||||||||||||||    
T  44382911 cattcattaaatgatatatgtagtctgtattataaaccacatacatcatttaatgaatgaa 44382851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 51253742 - 51253682
Alignment:
Q  32 tattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataat 92  Q
    |||||| ||| | |||||||||||||| |||| | |||||| |||||||||||||||||||    
T  51253742 tattatagacaacatacatcatttaataaatggatttaaaatattgatttttgtttataat 51253682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 2868514 - 2868569
Alignment:
Q  153 tgtcttaaaagaactgaactatttcacttttcaatataatattaattacttttttc 208  Q
    |||| ||||| |||||| | |||||||||||||||| ||||||||||| |||||||    
T  2868514 tgtcctaaaataactgatccatttcacttttcaatacaatattaattatttttttc 2868569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 22497016 - 22496961
Alignment:
Q  39 gaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||| |||||||||||||||||||||  ||||| ||| ||||||| |||||||||    
T  22497016 gaccacatacatcatttaatgaatgaatctaaaatattaatttttgcttataatag 22496961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 73
Target Start/End: Original strand, 36571417 - 36571483
Alignment:
Q  6 attcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    ||||| ||||||| |||| |||||||||| ||  | || |||||||||||||||||||||||||||||    
T  36571417 attcaataaatgatgtatgtagtctatat-ataaatcatatacatcatttaatgaatgaacttaaaaa 36571483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 40639784 - 40639839
Alignment:
Q  39 gaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||| ||||||||||||||||||||| ||||||  || ||||||| |||||||||    
T  40639784 gaccacatacatcatttaatgaatgaatttaaaatgttaatttttgcttataatag 40639839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 208
Target Start/End: Complemental strand, 43640712 - 43640677
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttc 208  Q
    |||||||||||||||| |||||||||||||||||||    
T  43640712 atttcacttttcaatacaatattaattacttttttc 43640677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 208
Target Start/End: Complemental strand, 46194353 - 46194318
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttc 208  Q
    |||||||||||||||| |||||||||||||||||||    
T  46194353 atttcacttttcaatacaatattaattacttttttc 46194318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 24722759 - 24722697
Alignment:
Q  32 tattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| ||||| |||||||||||||| ||||||  ||||| ||| ||||||| |||||||||    
T  24722759 tattatagaccacatacatcatttaataaatgaatctaaaatattaatttttgcttataatag 24722697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 29241555 - 29241609
Alignment:
Q  39 gaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    |||||||||||||||||| ||||||||  |||||| |||||||| | ||||||||    
T  29241555 gaccaaatacatcatttattgaatgaatctaaaaagttgattttggcttataata 29241609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 36791020 - 36790986
Alignment:
Q  173 atttcacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||| ||||||||||||||||||    
T  36791020 atttcacttttcaatacaatattaattactttttt 36790986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 40169079 - 40169129
Alignment:
Q  43 aaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    |||||||| ||| | ||||||||||||||||||| ||||||| ||||||||    
T  40169079 aaatacattattaattgaatgaacttaaaaaattaatttttgcttataata 40169129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 45736759 - 45736697
Alignment:
Q  32 tattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| ||||| |||||||||||||||||||||  ||||  || |||||||| |||||||||    
T  45736759 tattatagaccacatacatcatttaatgaatgaatctaaactatcgatttttgcttataatag 45736697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 49003230 - 49003276
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||| ||||||||||| |||||||||||||||||||  |||||||||    
T  49003230 attttacttttcaatacaatattaattacttttttctctttataact 49003276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 52215948 - 52216010
Alignment:
Q  32 tattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| ||||| |||||||||||||||| ||||  |||||  |||||||||| |||||||||    
T  52215948 tattatagaccacatacatcatttaatgagtgaatctaaaatgttgatttttgcttataatag 52216010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 54008306 - 54008236
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaat 75  Q
    |||||||| ||||| |||| | ||| ||||| || |||| |||||||||| ||||||||||| ||||||||    
T  54008306 cattcatttaatgatgtatatggtccatattgttaaccacatacatcattaaatgaatgaacctaaaaaat 54008236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 55415586 - 55415552
Alignment:
Q  173 atttcacttttcaatataatattaattactttttt 207  Q
    ||||||||||||||||||| |||||||||||||||    
T  55415586 atttcacttttcaatataacattaattactttttt 55415552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 7823908 - 7823997
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||| ||||||||| ||||||  |||||| || |||||| ||||||||||||||| |||||  |||||  || ||||| | |||||||||    
T  7823908 catttattaaatgatgtatttgatctataataatgaccatatacatcatttaatggatgaatctaaaatgttaattttagcttataatag 7823997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 207
Target Start/End: Original strand, 9017760 - 9017793
Alignment:
Q  174 tttcacttttcaatataatattaattactttttt 207  Q
    ||||||||||||||| ||||||||||||||||||    
T  9017760 tttcacttttcaatacaatattaattactttttt 9017793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 12047322 - 12047277
Alignment:
Q  27 gtctatattattgaccaaatacatcatttaatgaatgaacttaaaa 72  Q
    |||| |||||| ||||| |||||||||| |||||||||||||||||    
T  12047322 gtctttattatagaccacatacatcattaaatgaatgaacttaaaa 12047277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 12744942 - 12745031
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| | ||||| |||| | |||| |||||| ||||| ||||||||||||||||||| |  |||||  || ||||||| |||||||||    
T  12744942 cattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaatgtatctaaaatgttaatttttgcttataatag 12745031  T

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Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 15280565 - 15280610
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataac 218  Q
    |||||||||||||||| |  |||||||||||||||| |||||||||    
T  15280565 atttcacttttcaatacatcattaattacttttttccttttataac 15280610  T

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Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 36317745 - 36317697
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataacttta 222  Q
    |||||||||| ||||| ||||||||||||||||||||  |||||||||||    
T  36317745 atttcactttccaatacaatattaattacttttttca-attataacttta 36317697  T

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Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 40470517 - 40470432
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttata 90  Q
    |||||||||||||| |||| ||||||||| ||  ||| | |||| ||||||||||||||||  |||||| |  ||||||| |||||    
T  40470517 cattcattaaatgacgtatgtagtctataataaagactacatacgtcatttaatgaatgaatctaaaaattaaatttttgcttata 40470432  T

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Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 206
Target Start/End: Original strand, 51164912 - 51164945
Alignment:
Q  173 atttcacttttcaatataatattaattacttttt 206  Q
    |||||||||||||||| |||||||||||||||||    
T  51164912 atttcacttttcaatacaatattaattacttttt 51164945  T

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Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 206
Target Start/End: Complemental strand, 54021604 - 54021571
Alignment:
Q  173 atttcacttttcaatataatattaattacttttt 206  Q
    |||||||||||||||||||||||||||| |||||    
T  54021604 atttcacttttcaatataatattaattaattttt 54021571  T

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Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 611624 - 611711
Alignment:
Q  6 attcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||| ||||||| |||| |||||||||| || ||||| |||||| ||||||||||| ||| |||||| |  | ||||| |||||||||    
T  611624 attcaataaatgatgtatgtagtctatat-atagaccacatacattatttaatgaattaacctaaaaagtcaacttttgcttataatag 611711  T

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Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 75
Target Start/End: Complemental strand, 1927566 - 1927530
Alignment:
Q  39 gaccaaatacatcatttaatgaatgaacttaaaaaat 75  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  1927566 gaccacatacatcattaaatgaatgaacttaaaaaat 1927530  T

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Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 3862318 - 3862282
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttca 209  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  3862318 atttcacttttcaatacaattttaattacttttttca 3862282  T

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Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 29352795 - 29352839
Alignment:
Q  31 atattattgaccaaatacatcatttaatgaatgaacttaaaaaat 75  Q
    |||||||| |||| |||||||||| ||||||||||| ||||||||    
T  29352795 atattattaaccacatacatcattaaatgaatgaacctaaaaaat 29352839  T

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Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 34327589 - 34327637
Alignment:
Q  45 atacatcatttaatgaatgaacttaaaaaattgatttttgtttataata 93  Q
    |||||||||||||||||||||  |||||  || ||||||||||||||||    
T  34327589 atacatcatttaatgaatgaatctaaaatgttaatttttgtttataata 34327637  T

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Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 37331640 - 37331708
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||||||||| |||| | ||| |||||||  |||| |||||||||| ||| ||||||| ||||||    
T  37331640 cattcattaaatgatgtatgtggtccatattataaaccacatacatcattaaataaatgaacctaaaaa 37331708  T

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Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 38082613 - 38082545
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | ||| |||||||  |||| |||||||||| ||||||||||| ||||||    
T  38082613 cattcatttaatgacgtatgtggtccatattatgaaccacatacatcattaaatgaatgaacctaaaaa 38082545  T

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Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 39365178 - 39365118
Alignment:
Q  159 aaaagaactgaactatttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||| |||||| | |||||| ||||||||| ||||||||||||||||| |  |||||||||    
T  39365178 aaaataactgagccatttcaattttcaatacaatattaattactttttcccctttataact 39365118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 200
Target Start/End: Complemental strand, 39851946 - 39851918
Alignment:
Q  172 tatttcacttttcaatataatattaatta 200  Q
    |||||||||||||||||||||||||||||    
T  39851946 tatttcacttttcaatataatattaatta 39851918  T

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Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 52866516 - 52866456
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaa 65  Q
    |||||||||||| |  ||| || ||| |||||| ||||| |||||||||||||||||||||    
T  52866516 cattcattaaataatatatataatctttattatagaccacatacatcatttaatgaatgaa 52866456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 219
Target Start/End: Original strand, 54493855 - 54493914
Alignment:
Q  159 aaaagaactgaactatttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||| |||||| | ||||||||||||| || |||||||||||||||||||  |||||||||    
T  54493855 aaaataactgagccatttcacttttca-tacaatattaattacttttttccctttataact 54493914  T

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Target: scaffold0121 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 17533 - 17449
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttata 90  Q
    |||||||| ||||| |||| | || |||| ||| ||||| |||||||||| ||||||||||||||||||||| ||||||| |||||    
T  17533 cattcatttaatgatgtatgtggtttataatatagaccacatacatcattaaatgaatgaacttaaaaaatt-atttttgcttata 17449  T

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Target: scaffold0121; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 17475 - 17543
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||| ||||| |||| | |||||||||||  |||| |||||||||| ||||||||||| ||||||    
T  17475 cattcatttaatgatgtatgtggtctatattataaaccacatacatcattaaatgaatgaacctaaaaa 17543  T

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Target: scaffold0321 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 1732 - 1662
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaat 75  Q
    |||||||| ||||| |||| | |||||||||||  |||| |||||||||| ||||||||||| ||||||||    
T  1732 cattcatttaatgatgtatgtggtctatattatgaaccacatacatcattaaatgaatgaacctaaaaaat 1662  T

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Target: scaffold0321; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 9696 - 9650
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||||| ||||||||||||| |||||  |||||||||    
T  9696 atttcacttttcaatacaatattaattactattttccctttataact 9650  T

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Target: scaffold0149 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 24674 - 24736
Alignment:
Q  32 tattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| ||||| |||||||||||||||||||||  ||||| ||| ||||||| |||||||||    
T  24674 tattatagaccacatacatcatttaatgaatgaatctaaaatattaatttttgcttataatag 24736  T

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Target: scaffold0029 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 15891 - 15802
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||||||||| |  ||| |||||| |||||| ||| | ||||||||||| || ||||||| ||||| |||||| ||| ||||||||||    
T  15891 cattcattaaataatatatgtagtctttattatagactacatacatcatttgataaatgaacctaaaatattgatgtttatttataatag 15802  T

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Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 146067 - 145978
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    |||||| | ||||| |||| | |||| |||| | ||||| |||||||||||||||||||||  |||||   |||||||||||||||||||    
T  146067 cattcaattaatgatgtatatggtctttattttagaccacatacatcatttaatgaatgaatctaaaatgatgatttttgtttataatag 145978  T

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Target: scaffold0045 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 219
Target Start/End: Original strand, 26268 - 26328
Alignment:
Q  159 aaaagaactgaactatttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||| |||| ||| ||||||||||| |||  ||||||||||||||||||| ||||||||||    
T  26268 aaaataactaaaccatttcactttttaattaaatattaattacttttttccttttataact 26328  T

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Target: scaffold0020 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 207
Target Start/End: Original strand, 171188 - 171220
Alignment:
Q  175 ttcacttttcaatataatattaattactttttt 207  Q
    |||||||||||||||||||||||||||||||||    
T  171188 ttcacttttcaatataatattaattactttttt 171220  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 230217 - 230262
Alignment:
Q  173 atttcacttttcaatataatattaattacttttttcattttataact 219  Q
    |||||||||||||||| ||||||||||| ||||||| ||||||||||    
T  230217 atttcacttttcaatacaatattaattatttttttc-ttttataact 230262  T

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Target: scaffold1476 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1476
Description:

Target: scaffold1476; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 741 - 789
Alignment:
Q  46 tacatcatttaatgaatgaacttaaaaaattgatttttgtttataatag 94  Q
    ||||||||||||||||||||  ||||| ||| ||||| |||||||||||    
T  741 tacatcatttaatgaatgaatctaaaatattaattttagtttataatag 789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 36451 - 36519
Alignment:
Q  5 cattcattaaatgaggtatttagtctatattattgaccaaatacatcatttaatgaatgaacttaaaaa 73  Q
    |||||||  ||||| |||| ||||| |||||||  |||| |||||||||| ||||||||||| ||||||    
T  36451 cattcatataatgatgtatgtagtccatattatgaaccacatacatcattaaatgaatgaacctaaaaa 36519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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