View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8518A_low_390 (Length: 216)
Name: NF8518A_low_390
Description: NF8518A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8518A_low_390 |
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Alignment Details
Target: chr3 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 49 - 209
Target Start/End: Complemental strand, 9199767 - 9199607
Alignment:
| Q |
49 |
ttcctaaaacatccactccagcttccagacttcaatttaaaagtccaatccccaatagaaagaggaagacatatatattttcacaatcaatgaactgaaa |
148 |
Q |
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| T |
9199767 |
ttcctaaaacatccactccagcttccagacttcaatttaaaagtccaatccccaatagaaagaggaagacatatatattttcacaatcaatgaactgaaa |
9199668 |
T |
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| Q |
149 |
acacttcttaagatggaaggaggtccaagactcaaatcctgattcctgaatactatcatat |
209 |
Q |
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| T |
9199667 |
acacttcttaagatagaaggaggtccaagactcaaatcctgattcctgaatactaacatat |
9199607 |
T |
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