View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8518A_low_404 (Length: 208)

Name: NF8518A_low_404
Description: NF8518A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8518A_low_404
NF8518A_low_404
[»] scaffold0692 (1 HSPs)
scaffold0692 (17-195)||(3198-3376)
[»] scaffold0225 (1 HSPs)
scaffold0225 (17-195)||(24199-24377)
[»] scaffold0076 (3 HSPs)
scaffold0076 (17-195)||(41063-41241)
scaffold0076 (65-186)||(56271-56392)
scaffold0076 (17-191)||(33000-33174)
[»] chr7 (25 HSPs)
chr7 (17-195)||(27107103-27107281)
chr7 (22-195)||(7824663-7824836)
chr7 (17-195)||(45147315-45147493)
chr7 (22-195)||(13455510-13455683)
chr7 (22-195)||(17924414-17924587)
chr7 (22-195)||(14937110-14937283)
chr7 (22-195)||(15364703-15364876)
chr7 (17-195)||(4440691-4440869)
chr7 (17-195)||(21673862-21674040)
chr7 (17-152)||(13353956-13354091)
chr7 (17-194)||(23642212-23642387)
chr7 (17-183)||(17144590-17144756)
chr7 (73-191)||(13666305-13666423)
chr7 (37-191)||(40495-40649)
chr7 (65-191)||(19147979-19148105)
chr7 (65-191)||(20747378-20747504)
chr7 (71-121)||(11236596-11236646)
chr7 (17-191)||(23505177-23505351)
chr7 (65-121)||(49153139-49153195)
chr7 (141-191)||(6414279-6414329)
chr7 (71-121)||(15154040-15154090)
chr7 (17-191)||(19613443-19613617)
chr7 (65-186)||(12457413-12457534)
chr7 (150-191)||(14130641-14130682)
chr7 (150-191)||(14434459-14434500)
[»] chr6 (26 HSPs)
chr6 (17-195)||(16381838-16382016)
chr6 (17-195)||(1648279-1648457)
chr6 (17-195)||(16233666-16233844)
chr6 (17-195)||(23996886-23997064)
chr6 (17-195)||(14624822-14625000)
chr6 (17-194)||(18572290-18572467)
chr6 (17-194)||(18837373-18837550)
chr6 (17-195)||(23027181-23027359)
chr6 (17-191)||(15077831-15078005)
chr6 (22-195)||(21927843-21928016)
chr6 (17-195)||(16098688-16098866)
chr6 (17-88)||(35275551-35275622)
chr6 (73-191)||(14380988-14381106)
chr6 (33-191)||(15459978-15460136)
chr6 (71-121)||(20636820-20636870)
chr6 (71-191)||(19865329-19865449)
chr6 (71-121)||(22078209-22078259)
chr6 (65-186)||(34645099-34645220)
chr6 (73-121)||(27330954-27331002)
chr6 (73-121)||(27391694-27391742)
chr6 (71-121)||(5838738-5838788)
chr6 (141-191)||(17416128-17416178)
chr6 (71-121)||(18407461-18407511)
chr6 (73-191)||(27566501-27566619)
chr6 (65-182)||(19435653-19435770)
chr6 (73-186)||(19879945-19880058)
[»] chr5 (22 HSPs)
chr5 (17-195)||(21936690-21936868)
chr5 (17-195)||(24581898-24582076)
chr5 (17-194)||(27011773-27011950)
chr5 (17-195)||(23504130-23504308)
chr5 (33-195)||(19566207-19566369)
chr5 (17-171)||(25243852-25244006)
chr5 (17-171)||(25308004-25308158)
chr5 (17-191)||(20774451-20774625)
chr5 (17-191)||(28894444-28894618)
chr5 (17-191)||(28915915-28916089)
chr5 (17-191)||(28923270-28923444)
chr5 (35-191)||(22462644-22462800)
chr5 (33-186)||(20822150-20822303)
chr5 (73-191)||(22235478-22235596)
chr5 (71-121)||(25423969-25424019)
chr5 (73-191)||(17268892-17269010)
chr5 (35-121)||(37542901-37542987)
chr5 (65-121)||(20343044-20343100)
chr5 (17-121)||(21680280-21680384)
chr5 (71-191)||(23574447-23574567)
chr5 (71-121)||(18776550-18776600)
chr5 (73-191)||(23440920-23441038)
[»] chr3 (30 HSPs)
chr3 (17-195)||(30138209-30138387)
chr3 (17-195)||(30147760-30147938)
chr3 (17-195)||(16257547-16257725)
chr3 (17-195)||(16742262-16742440)
chr3 (17-195)||(13966899-13967077)
chr3 (17-195)||(8273958-8274136)
chr3 (17-194)||(6152410-6152587)
chr3 (23-195)||(17193497-17193669)
chr3 (17-172)||(6711968-6712123)
chr3 (17-148)||(15610554-15610684)
chr3 (22-169)||(15095434-15095581)
chr3 (17-185)||(18749078-18749246)
chr3 (70-195)||(266907-267032)
chr3 (77-191)||(17493037-17493151)
chr3 (65-121)||(17490317-17490373)
chr3 (33-191)||(10419609-10419767)
chr3 (17-191)||(14087080-14087254)
chr3 (73-191)||(18133950-18134068)
chr3 (17-191)||(44777654-44777828)
chr3 (71-172)||(16491794-16491895)
chr3 (71-191)||(9523116-9523236)
chr3 (143-195)||(15577153-15577205)
chr3 (71-191)||(16371810-16371930)
chr3 (73-191)||(12498645-12498763)
chr3 (71-121)||(15062211-15062261)
chr3 (150-191)||(14574330-14574371)
chr3 (65-191)||(11303369-11303495)
chr3 (150-191)||(12360223-12360264)
chr3 (150-191)||(16836191-16836232)
chr3 (154-186)||(16380613-16380645)
[»] chr1 (10 HSPs)
chr1 (17-195)||(20830784-20830962)
chr1 (17-194)||(22134949-22135126)
chr1 (17-185)||(21201683-21201849)
chr1 (17-191)||(19855098-19855272)
chr1 (65-191)||(20835328-20835454)
chr1 (71-121)||(22361690-22361740)
chr1 (72-191)||(20856208-20856327)
chr1 (73-191)||(20939511-20939629)
chr1 (73-121)||(21749804-21749852)
chr1 (141-191)||(22432632-22432682)
[»] chr2 (23 HSPs)
chr2 (21-195)||(24831051-24831225)
chr2 (17-193)||(12640093-12640269)
chr2 (17-195)||(24569528-24569706)
chr2 (17-195)||(22276683-22276861)
chr2 (17-186)||(22761429-22761598)
chr2 (23-195)||(23816909-23817081)
chr2 (22-195)||(25129052-25129225)
chr2 (17-195)||(21906029-21906207)
chr2 (73-191)||(23294344-23294462)
chr2 (65-191)||(24642151-24642277)
chr2 (33-191)||(27210048-27210206)
chr2 (73-186)||(19651968-19652081)
chr2 (71-191)||(23107644-23107764)
chr2 (65-121)||(1064230-1064286)
chr2 (73-117)||(21890634-21890678)
chr2 (33-121)||(23066870-23066958)
chr2 (71-121)||(22756379-22756429)
chr2 (150-191)||(23277185-23277226)
chr2 (73-117)||(24707398-24707442)
chr2 (17-121)||(27364939-27365043)
chr2 (73-121)||(30210832-30210880)
chr2 (73-121)||(41608301-41608349)
chr2 (73-121)||(45529990-45530038)
[»] scaffold0077 (1 HSPs)
scaffold0077 (17-195)||(27589-27767)
[»] chr8 (29 HSPs)
chr8 (17-195)||(21850100-21850278)
chr8 (17-195)||(16876858-16877036)
chr8 (17-185)||(20652096-20652264)
chr8 (17-195)||(23156775-23156953)
chr8 (17-195)||(21196265-21196443)
chr8 (49-195)||(22983273-22983419)
chr8 (17-195)||(22316031-22316209)
chr8 (17-194)||(25282971-25283148)
chr8 (33-195)||(22283844-22284006)
chr8 (17-186)||(25283205-25283374)
chr8 (71-194)||(22366482-22366605)
chr8 (92-172)||(23901138-23901218)
chr8 (73-121)||(21043359-21043407)
chr8 (71-191)||(19978811-19978931)
chr8 (134-194)||(22365694-22365754)
chr8 (71-121)||(21393682-21393732)
chr8 (71-121)||(21788176-21788226)
chr8 (71-121)||(21921553-21921603)
chr8 (150-191)||(31416370-31416411)
chr8 (37-191)||(19868537-19868691)
chr8 (71-121)||(20389013-20389063)
chr8 (141-191)||(20975538-20975588)
chr8 (71-121)||(21166355-21166405)
chr8 (71-121)||(21251855-21251905)
chr8 (65-191)||(22371784-22371910)
chr8 (141-186)||(1267087-1267132)
chr8 (65-121)||(803484-803540)
chr8 (150-186)||(19852260-19852296)
chr8 (150-186)||(19858296-19858332)
[»] chr4 (18 HSPs)
chr4 (17-195)||(15292478-15292656)
chr4 (17-194)||(9291610-9291787)
chr4 (17-194)||(14998091-14998268)
chr4 (17-194)||(13248420-13248597)
chr4 (17-186)||(12342185-12342353)
chr4 (17-173)||(16028907-16029063)
chr4 (73-173)||(38811703-38811803)
chr4 (17-191)||(27901164-27901338)
chr4 (65-191)||(15246702-15246828)
chr4 (65-191)||(15078413-15078539)
chr4 (22-191)||(1648602-1648771)
chr4 (65-186)||(20891765-20891886)
chr4 (73-121)||(7091280-7091328)
chr4 (71-191)||(14691680-14691800)
chr4 (71-121)||(8706766-8706816)
chr4 (71-121)||(15146999-15147049)
chr4 (72-121)||(12524524-12524573)
chr4 (65-121)||(33223771-33223827)
[»] scaffold0302 (1 HSPs)
scaffold0302 (17-195)||(5980-6158)
[»] scaffold0266 (1 HSPs)
scaffold0266 (22-194)||(9189-9361)
[»] scaffold0162 (1 HSPs)
scaffold0162 (17-194)||(13714-13891)
[»] scaffold0369 (1 HSPs)
scaffold0369 (17-195)||(267-445)
[»] scaffold0207 (1 HSPs)
scaffold0207 (17-195)||(18852-19030)
[»] scaffold0028 (2 HSPs)
scaffold0028 (17-195)||(105896-106074)
scaffold0028 (17-191)||(49837-50011)
[»] scaffold0218 (1 HSPs)
scaffold0218 (17-194)||(3267-3444)
[»] scaffold0066 (1 HSPs)
scaffold0066 (17-194)||(46960-47137)
[»] scaffold0023 (2 HSPs)
scaffold0023 (17-185)||(55223-55391)
scaffold0023 (71-191)||(28749-28869)
[»] scaffold0011 (2 HSPs)
scaffold0011 (33-185)||(180739-180891)
scaffold0011 (73-191)||(195083-195201)
[»] scaffold0132 (2 HSPs)
scaffold0132 (17-194)||(15462-15639)
scaffold0132 (130-195)||(44343-44408)
[»] scaffold0876 (1 HSPs)
scaffold0876 (17-185)||(3357-3525)
[»] scaffold0310 (1 HSPs)
scaffold0310 (17-195)||(14060-14238)
[»] scaffold0047 (1 HSPs)
scaffold0047 (17-195)||(454-632)
[»] scaffold0567 (1 HSPs)
scaffold0567 (17-195)||(10099-10277)
[»] scaffold0021 (3 HSPs)
scaffold0021 (17-195)||(71994-72172)
scaffold0021 (17-191)||(24772-24945)
scaffold0021 (17-195)||(32736-32914)
[»] scaffold0124 (2 HSPs)
scaffold0124 (17-195)||(7131-7310)
scaffold0124 (73-191)||(13007-13125)
[»] scaffold0808 (1 HSPs)
scaffold0808 (22-191)||(382-551)
[»] scaffold0235 (3 HSPs)
scaffold0235 (17-194)||(26612-26789)
scaffold0235 (76-191)||(10839-10954)
scaffold0235 (76-191)||(21053-21168)
[»] scaffold0008 (2 HSPs)
scaffold0008 (17-185)||(24695-24863)
scaffold0008 (33-185)||(232370-232522)
[»] scaffold0554 (1 HSPs)
scaffold0554 (17-192)||(3966-4141)
[»] scaffold0589 (1 HSPs)
scaffold0589 (17-195)||(9791-9969)
[»] scaffold0117 (1 HSPs)
scaffold0117 (17-194)||(747-924)
[»] scaffold0327 (1 HSPs)
scaffold0327 (17-172)||(7997-8152)
[»] scaffold0610 (1 HSPs)
scaffold0610 (17-195)||(8213-8391)
[»] scaffold0160 (1 HSPs)
scaffold0160 (17-195)||(8070-8248)
[»] scaffold0091 (1 HSPs)
scaffold0091 (79-185)||(45312-45418)
[»] scaffold0243 (1 HSPs)
scaffold0243 (17-194)||(296-470)
[»] scaffold0058 (2 HSPs)
scaffold0058 (17-152)||(75406-75541)
scaffold0058 (71-191)||(19929-20049)
[»] scaffold0205 (1 HSPs)
scaffold0205 (17-172)||(9390-9545)
[»] scaffold0387 (1 HSPs)
scaffold0387 (110-195)||(14943-15028)
[»] scaffold0298 (3 HSPs)
scaffold0298 (73-191)||(11436-11554)
scaffold0298 (73-191)||(15206-15324)
scaffold0298 (65-186)||(20797-20918)
[»] scaffold0034 (2 HSPs)
scaffold0034 (73-191)||(4332-4450)
scaffold0034 (17-122)||(68248-68353)
[»] scaffold0126 (1 HSPs)
scaffold0126 (73-186)||(41731-41844)
[»] scaffold0120 (3 HSPs)
scaffold0120 (33-94)||(23082-23143)
scaffold0120 (71-113)||(6910-6952)
scaffold0120 (73-191)||(903-1021)
[»] scaffold0029 (1 HSPs)
scaffold0029 (33-186)||(95341-95494)
[»] scaffold0106 (1 HSPs)
scaffold0106 (71-191)||(14848-14968)
[»] scaffold0026 (1 HSPs)
scaffold0026 (65-121)||(29824-29880)
[»] scaffold1710 (1 HSPs)
scaffold1710 (73-191)||(673-791)
[»] scaffold0682 (1 HSPs)
scaffold0682 (17-191)||(692-866)
[»] scaffold0367 (1 HSPs)
scaffold0367 (73-191)||(6617-6735)
[»] scaffold0222 (1 HSPs)
scaffold0222 (73-191)||(7869-7987)
[»] scaffold0203 (1 HSPs)
scaffold0203 (73-191)||(13678-13796)
[»] scaffold0156 (1 HSPs)
scaffold0156 (73-191)||(28034-28152)
[»] scaffold0020 (2 HSPs)
scaffold0020 (65-191)||(100923-101049)
scaffold0020 (71-191)||(181008-181128)
[»] scaffold0010 (1 HSPs)
scaffold0010 (73-191)||(46778-46896)
[»] scaffold0145 (1 HSPs)
scaffold0145 (72-121)||(39389-39438)
[»] scaffold0676 (1 HSPs)
scaffold0676 (71-191)||(6823-6943)
[»] scaffold0465 (1 HSPs)
scaffold0465 (35-191)||(575-731)
[»] scaffold0228 (1 HSPs)
scaffold0228 (17-121)||(575-679)
[»] scaffold1646 (1 HSPs)
scaffold1646 (65-191)||(133-259)
[»] scaffold0113 (1 HSPs)
scaffold0113 (65-191)||(25236-25362)
[»] scaffold0894 (1 HSPs)
scaffold0894 (71-121)||(3253-3303)
[»] scaffold0540 (1 HSPs)
scaffold0540 (71-121)||(7708-7758)
[»] scaffold0507 (1 HSPs)
scaffold0507 (17-191)||(9779-9953)
[»] scaffold0403 (1 HSPs)
scaffold0403 (73-191)||(7181-7299)
[»] scaffold0234 (1 HSPs)
scaffold0234 (71-121)||(24449-24499)
[»] scaffold0192 (1 HSPs)
scaffold0192 (65-191)||(27333-27459)
[»] scaffold0161 (1 HSPs)
scaffold0161 (71-121)||(71-121)
[»] scaffold0139 (1 HSPs)
scaffold0139 (65-191)||(520-646)
[»] scaffold0114 (1 HSPs)
scaffold0114 (71-121)||(19718-19768)
[»] scaffold0081 (2 HSPs)
scaffold0081 (71-121)||(19481-19531)
scaffold0081 (71-121)||(34905-34955)
[»] scaffold0049 (1 HSPs)
scaffold0049 (65-191)||(51234-51360)
[»] scaffold0042 (1 HSPs)
scaffold0042 (73-191)||(39199-39317)
[»] scaffold0017 (1 HSPs)
scaffold0017 (71-121)||(196855-196905)
[»] scaffold0005 (2 HSPs)
scaffold0005 (65-191)||(261117-261243)
scaffold0005 (73-121)||(278209-278257)
[»] scaffold0249 (1 HSPs)
scaffold0249 (65-186)||(1343-1464)
[»] scaffold0190 (1 HSPs)
scaffold0190 (65-186)||(32690-32811)
[»] scaffold0501 (1 HSPs)
scaffold0501 (71-191)||(3003-3123)
[»] scaffold0483 (1 HSPs)
scaffold0483 (71-191)||(12303-12423)
[»] scaffold0476 (1 HSPs)
scaffold0476 (73-113)||(10204-10244)
[»] scaffold0396 (1 HSPs)
scaffold0396 (71-191)||(4840-4960)
[»] scaffold0358 (1 HSPs)
scaffold0358 (71-191)||(6858-6978)
[»] scaffold0198 (1 HSPs)
scaffold0198 (71-191)||(24307-24427)
[»] scaffold0111 (1 HSPs)
scaffold0111 (139-195)||(3364-3420)
[»] scaffold0064 (2 HSPs)
scaffold0064 (71-191)||(28145-28265)
scaffold0064 (71-191)||(40136-40256)
[»] scaffold1061 (1 HSPs)
scaffold1061 (65-191)||(2397-2523)
[»] scaffold0035 (1 HSPs)
scaffold0035 (65-191)||(3560-3686)
[»] scaffold2094 (1 HSPs)
scaffold2094 (71-121)||(439-489)
[»] scaffold1602 (1 HSPs)
scaffold1602 (71-121)||(1444-1494)
[»] scaffold0742 (1 HSPs)
scaffold0742 (73-191)||(6022-6140)
[»] scaffold0730 (1 HSPs)
scaffold0730 (73-119)||(4971-5017)
[»] scaffold0621 (1 HSPs)
scaffold0621 (71-121)||(2346-2396)
[»] scaffold0348 (1 HSPs)
scaffold0348 (33-191)||(6993-7151)
[»] scaffold0333 (1 HSPs)
scaffold0333 (71-121)||(16534-16584)
[»] scaffold0101 (1 HSPs)
scaffold0101 (65-191)||(4823-4949)
[»] scaffold0090 (2 HSPs)
scaffold0090 (17-191)||(19658-19832)
scaffold0090 (17-191)||(23820-23994)
[»] scaffold0004 (1 HSPs)
scaffold0004 (141-191)||(323513-323563)
[»] scaffold0001 (1 HSPs)
scaffold0001 (71-121)||(390577-390627)
[»] scaffold0324 (1 HSPs)
scaffold0324 (72-121)||(19380-19429)
[»] scaffold0239 (1 HSPs)
scaffold0239 (154-186)||(12245-12277)
[»] scaffold0232 (1 HSPs)
scaffold0232 (65-121)||(1057-1113)
[»] scaffold0093 (1 HSPs)
scaffold0093 (73-121)||(27140-27188)
[»] scaffold0012 (1 HSPs)
scaffold0012 (73-121)||(229922-229970)


Alignment Details
Target: scaffold0692 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 3198 - 3376
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  3198 atcaggatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtttatgcttgtttggtttgtcagaaatcgaagattgaaca 3297  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3298 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggattttgttgga 3376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 24377 - 24199
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  24377 atcaggatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtttatgcttgtttggtttgtcagaaatcgaagattgaaca 24278  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24277 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggattttgttgga 24199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 163; Significance: 3e-87; HSPs: 3)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 41241 - 41063
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  41241 atcaggatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtttatgcttgtttggtttgtcagaaatcgaagattgaaca 41142  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41141 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggattttgttgga 41063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 56271 - 56392
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaa 164  Q
    ||||| ||||||||||||| ||||||  ||||||||| || || |||||||||||||  ||  | || ||| ||  |||||||  |||||| ||||||||    
T  56271 ttgctcagtttgtgtatgcatgtttgacttgtcagaagtctaaagttgaacatcagaagcctgcagggttgttgacaccgttggatgtgccggagtggaa 56370  T
Q  165 gtgggatagcatttctatggat 186  Q
    ||| ||||||||||||||||||    
T  56371 gtgagatagcatttctatggat 56392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 33000 - 33174
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||||| | ||||||||||||||||  |||||   ||  ||||| | ||||||||||| ||||||  ||| ||||| || |||||||||||    
T  33000 atcacgatttgaaaaagctgttttggtggcctggtttgaagcgtgatgttgctcaatttgtgtatgcatgtttgacttgccagaagtctaaggttgaaca 33099  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    ||||| |||  | || ||| ||  ||| |||  ||| || |||||||| |||||||| |||||||||||| ||||    
T  33100 tcagaaacctgcagggttgttgacaccattggatgtaccggagtggaaatgggatagtatttctatggattttgt 33174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 163; Significance: 3e-87; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 27107103 - 27107281
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  27107103 atcaggatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtttatgcttgtttggtttgtcagaaatcgaagattgaaca 27107202  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27107203 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggattttgttgga 27107281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 22 - 195
Target Start/End: Complemental strand, 7824836 - 7824663
Alignment:
Q  22 gatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  7824836 gatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtttatgcttgtttggtttgtcagaaatcgaagattgaacatcaga 7824737  T
Q  122 gaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  7824736 gaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggataacatttctatggattttgttgga 7824663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 45147493 - 45147315
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||| || || ||||| ||||||||||||||||||||||| |||||| |||||||    
T  45147493 atcaggatttgaagaggttgttttggtggcctggaatgaagaaggagatcgcggaatttgtttatgcttgtttggtttgtcagaagtcgaagattgaaca 45147394  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||  ||||||||    
T  45147393 tcagaaaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaaatgggataacatctctatggactttgttgga 45147315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 22 - 195
Target Start/End: Complemental strand, 13455683 - 13455510
Alignment:
Q  22 gatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||    
T  13455683 gatttgaagaggttgttatggtggcctggaatgaagaaggagattgctgagtttgtttatgcttgcttggtttgtcagaagtcgaaggttgaacatcaga 13455584  T
Q  122 gaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
     |||||  ||||||||||||||||||||||| ||||| ||||| || ||||| || ||||||||| ||||||||    
T  13455583 aaccgttaggtttgatgcaaccgttgtttgttccagaatggaaatgagatagtatctctatggattttgttgga 13455510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 22 - 195
Target Start/End: Complemental strand, 17924587 - 17924414
Alignment:
Q  22 gatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| || ||||| |||||||| || ||||||||||| |||||| ||||||||||||    
T  17924587 gatttgaagaggttgttttggtggcctggaatgaagaaggagattgcggaatttgtttatgcttgctttgtttgtcagaagtcgaagattgaacatcaga 17924488  T
Q  122 gaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||| ||||| || ||||||||  ||||||||    
T  17924487 gaccgtcgggtttgatgcaaccgttgtttgagccagagtgaaagtgagatagtatctctatggactttgttgga 17924414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 22 - 195
Target Start/End: Complemental strand, 14937283 - 14937110
Alignment:
Q  22 gatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    |||||||| |||||||||||||||||| |||||||||| || ||||| |||||||| |||||| ||||||||||||| || |||||| ||||||||||||    
T  14937283 gatttgaagaggttgttttggtggcctagaatgaagaacgaaattgcagagtttgtttatgctagtttggtttgtcataagtcgaagattgaacatcaga 14937184  T
Q  122 gaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
     |||||| ||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||  ||||||||    
T  14937183 aaccgtcaggtttgatgcaaccgttgtttgtgccacagtggaagtgggatagcaactctatggactttgttgga 14937110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 22 - 195
Target Start/End: Complemental strand, 15364876 - 15364703
Alignment:
Q  22 gatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    |||||||| |||||||||||||||||| |||||||||| || ||||| |||||||| |||||| ||||||||||||| || |||||| ||||||||||||    
T  15364876 gatttgaagaggttgttttggtggcctagaatgaagaacgaaattgcagagtttgtttatgctagtttggtttgtcataagtcgaagattgaacatcaga 15364777  T
Q  122 gaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
     |||||| ||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||  ||||||||    
T  15364776 aaccgtcaggtttgatgcaaccgttgtttgtgccaaagtggaagtgggatagcaactctatggactttgttgga 15364703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 4440869 - 4440691
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| ||||| || ||||||||||||||| ||||||||||||||||||| || || ||||| ||||||||| ||||||||||||| |||| | |||||||    
T  4440869 atcaggatttaaagaggttgttttggtggtctggaatgaagaaggagatcgcagaatttgtatatgcttgtatggtttgtcagaagtcgacgattgaaca 4440770  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    ||||| |||||  ||||||||||||||||| |||||||||||||||||||||||||  || ||||||||| ||||||||    
T  4440769 tcagaaaccgtacggtttgatgcaaccgttatttgtgccagagtggaagtgggataatatctctatggattttgttgga 4440691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 21673862 - 21674040
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| | ||||||||||||||||||| ||||||| |||||| | || ||||| |||||||| ||||||||||||||||||||| |||||||    
T  21673862 atcaggatttgaagatgttgttttggtggcctggactgaagaaagagatttcagaatttgtttatgcttgcttggtttgtcagaaatcgaagattgaaca 21673961  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    ||| |||||||| |||||||||||||||||| |||||| |||||||||||| ||||| || ||||||||  ||||||||    
T  21673962 tcaaagaccgtcaggtttgatgcaaccgttgattgtgctagagtggaagtgagatagtatctctatggactttgttgga 21674040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 13354091 - 13353956
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| || |||||||||||| ||||||||||||||||||| || |||||||| |||||||||||||||||| |||| || ||| |||||||    
T  13354091 atcaggatttgaagagattgttttggtggactggaatgaagaaggagatcgcagagtttgtttatgcttgtttggtttgttagaagtctaagattgaaca 13353992  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgt 152  Q
    ||||| | | || |||||||||||||||||||||||    
T  13353991 tcagaaatcatcaggtttgatgcaaccgttgtttgt 13353956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 17 - 194
Target Start/End: Complemental strand, 23642387 - 23642212
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttg-gtttgtcagaaatcgaaggttgaac 115  Q
    |||| |||||||| |||||||||||||||||||||||||||||||| ||   ||||||||||||||||||||||  ||||||| || || ||  ||||||    
T  23642387 atcaggatttgaagaggttgttttggtggcctggaatgaagaaggacat--atgagtttgtgtatgcttgtttgattttgtca-aagtctaacattgaac 23642291  T
Q  116 atcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgg 194  Q
    ||||||   |||| |||||||| |||||||||||||| || ||||||||||||||||  ||||||||| || |||||||    
T  23642290 atcagaagtcgtcaggtttgattcaaccgttgtttgtccctgagtggaagtgggataatatttctatgtattttgttgg 23642212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 17 - 183
Target Start/End: Original strand, 17144590 - 17144756
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    ||||||||||||| || ||| || ||||| || ||||||| | ||| || || ||||||||||||||||||||| ||||||| || || ||| || ||||    
T  17144590 atcaagatttgaagagattgcttaggtggtctagaatgaaaagggaaatagcggagtttgtgtatgcttgtttgatttgtcaaaagtctaagatttaaca 17144689  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatg 183  Q
    |||||  || ||||||||||||||| |||||||||| || |||||||||||| ||| ||| ||||||    
T  17144690 tcagaagccatcgggtttgatgcaatcgttgtttgtaccggagtggaagtggaataacatatctatg 17144756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 13666423 - 13666305
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    ||||||||||| ||||||  ||||||||| |||||||||||||||||||  ||  | || ||| ||  |||| ||  |||||| ||||||||||||||||    
T  13666423 tttgtgtatgcatgtttgacttgtcagaagtcgaaggttgaacatcagaagcctgcagggttgttgacaccgatggatgtgccggagtggaagtgggata 13666324  T
Q  173 gcatttctatggatattgt 191  Q
    |||||||||||||| ||||    
T  13666323 gcatttctatggattttgt 13666305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 191
Target Start/End: Original strand, 40495 - 40649
Alignment:
Q  37 ttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttga 136  Q
    ||||||||| | || |||| |||||| || || || ||||||||||||||  |  ||||||| ||||| || || |||||||| | |||||| || ||||    
T  40495 ttttggtgggcaggtatgacgaaggatatagccgaatttgtgtatgcttgcctaatttgtcaaaaatcaaaagtagaacatcaaaaaccgtctgggttga 40594  T
Q  137 tgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    ||||||| |||  | | ||||||||||||||||| |||||||| |||||| ||||    
T  40595 tgcaacccttgagtattccagagtggaagtgggacagcatttcgatggattttgt 40649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 191
Target Start/End: Complemental strand, 19148105 - 19147979
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaa 164  Q
    ||||| ||||||| ||||| ||||||  ||||||||| || |||||||| |||||||  ||  | || ||| ||  |||||||  ||||||||| |||||    
T  19148105 ttgctcagtttgtttatgcatgtttgacttgtcagaagtctaaggttgagcatcagaagcctgcagggttgttgacaccgttggatgtgccagaatggaa 19148006  T
Q  165 gtgggatagcatttctatggatattgt 191  Q
    ||||||||||||||| |||||| ||||    
T  19148005 gtgggatagcatttccatggattttgt 19147979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 191
Target Start/End: Complemental strand, 20747504 - 20747378
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaa 164  Q
    ||||| ||||||| ||||| ||||||  ||||||||| || |||||||| |||||||  ||  | || ||| ||  |||||||  ||||||||| |||||    
T  20747504 ttgctcagtttgtttatgcatgtttgacttgtcagaagtctaaggttgagcatcagaagcctgcagggttgttgacaccgttggatgtgccagaatggaa 20747405  T
Q  165 gtgggatagcatttctatggatattgt 191  Q
    ||||||||||||||| |||||| ||||    
T  20747404 gtgggatagcatttccatggattttgt 20747378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 11236596 - 11236646
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||||| ||||||| ||||||||||||||||| ||||| |||||||    
T  11236596 agtttgtgtattcttgtttagtttgtcagaaatcgaaagttgagcatcaga 11236646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 23505177 - 23505351
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||||| | ||||||||||| ||||  |||||   ||  ||||| | ||||||||||| |||||   ||||||||| || |||||||||||    
T  23505177 atcatgatttgaaaaagctgttttggtggtctgggttgaagcgagatgttgctcattttgtgtatgcatgtttaacttgtcagaagtctaaggttgaaca 23505276  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    ||||| |||  | || ||| ||   || |||  ||| || |||||||| ||||||||||||||||||||| ||||    
T  23505277 tcagaaacctgcaggattgttgacgccattggatgtaccggagtggaaatgggatagcatttctatggattttgt 23505351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 49153195 - 49153139
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||| ||||||| ||||| |||||| ||||||||||||| |||||||| |||||||    
T  49153195 ttgctcagtttgtttatgcctgtttgatttgtcagaaatccaaggttgagcatcaga 49153139  T

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Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 6414329 - 6414279
Alignment:
Q  141 accgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    |||||||  |||||| ||||||||||||||||| |||||||||||| ||||    
T  6414329 accgttggatgtgccggagtggaagtgggatagtatttctatggattttgt 6414279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 15154040 - 15154090
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||||| |||||||| |||||||||| ||||| ||||| |||||||    
T  15154040 agtttgtgtattcttgtttgatttgtcagaagtcgaaagttgagcatcaga 15154090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 19613617 - 19613443
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||||| | ||||||||||| ||||  |||||   ||  ||||| | ||||||||||| ||||||  ||| ||||| || |||||||||||    
T  19613617 atcacgatttgaaaaagctgttttggtggtctggtttgaagcgtgatgttgctcaatttgtgtatgcatgtttgacttgccagaagtctaaggttgaaca 19613518  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    |||||  ||  | || ||| ||  ||| |||  ||| || |||||||| |||||||| |||||||||||| ||||    
T  19613517 tcagaagcctgcagggttgttgacaccattggatgtaccggagtggaaatgggatagtatttctatggattttgt 19613443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 12457534 - 12457413
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaa 164  Q
    ||||| ||||||| ||||||||||||  ||||||||| || || |||||||||||||  ||  | || ||| ||  |||||||  ||| || ||||||||    
T  12457534 ttgctcagtttgtttatgcttgtttgacttgtcagaagtctaaagttgaacatcagaagcctgcagggttgttgacaccgttggatgtaccggagtggaa 12457435  T
Q  165 gtgggatagcatttctatggat 186  Q
    |||||| || || |||||||||    
T  12457434 gtgggacagtatctctatggat 12457413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 14130682 - 14130641
Alignment:
Q  150 tgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    |||||| |||||||| ||||||||||||||||||||| ||||    
T  14130682 tgtgccggagtggaaatgggatagcatttctatggattttgt 14130641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 14434500 - 14434459
Alignment:
Q  150 tgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    |||||| |||||||| ||||||||||||||||||||| ||||    
T  14434500 tgtgccggagtggaaatgggatagcatttctatggattttgt 14434459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 163; Significance: 3e-87; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 16381838 - 16382016
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  16381838 atcaggatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtttatgcttgtttggtttgtcagaaatcgaagattgaaca 16381937  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16381938 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggattttgttgga 16382016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 1648279 - 1648457
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  1648279 atcaggatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtttatgcttgtttggtttgtcagaaatcgaagattgaaca 1648378  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  1648379 tcagagaccgttgggtttgatgcaaccgttgtttgtgccagagtggaaatgggatagcatttctatggattttgttgga 1648457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 16233844 - 16233666
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  16233844 atcaagatttgaaaaggttgttttggtggcctggaatgaagatggagatcgctgagtttgtttatgcttgtttggtttgtcagaaatcgaagattgaaca 16233745  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  16233744 tcagagaccgtcgggtttgatgcaaccattgtttgtgccagagtggaagtgggatagcatttccatggattttgttgga 16233666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 23997064 - 23996886
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  23997064 atcaagattttaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtttatgcttgtttggtttgtcagaaatcgaagattgaaca 23996965  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||    
T  23996964 tcagagaccgtcgggtttgatgcaaccattgtttgtgccagagtggaaatgggatagcatttctatggatttcgttgga 23996886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 14624822 - 14625000
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||    
T  14624822 atcaggatttgaaaaggttgttttggtgttctggaatgaagaaggagattgctgagtttgtttatgcttgtttggtttgtcaaaaatcgaagattgaaca 14624921  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  14624922 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctattgattttgttgga 14625000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 17 - 194
Target Start/End: Complemental strand, 18572467 - 18572290
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| |||||||||| |||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||    
T  18572467 atcaggatttgaagaggttgtttttgtggcctggaattaagaaggagattactgagtttgtttatgcttgtttggtttgtcagaaatcgaagattgaaca 18572368  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgg 194  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||    
T  18572367 tcagagaccgtcaggtttgatgcaaccgttgtttgtgccagagtggaagtgagatagcatttctatggactttgttgg 18572290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 17 - 194
Target Start/End: Original strand, 18837373 - 18837550
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| ||||| || || ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| | | |||||||    
T  18837373 atcaggatttaaagagattgttttggtggcctggaatgaagaaggaaattgctgagtttgtttatgcttgtttggtttgtcagaaatcaatgattgaaca 18837472  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgg 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||    
T  18837473 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggacgtgggatagcatttctatggactttgttgg 18837550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 23027181 - 23027359
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||| |||||||    
T  23027181 atcaggatttgaagaggttgttttggtggcctggaatgaagaaggagattgcagagtttgtttatgcttgtttggtttgtcagaagtcgaagattgaaca 23027280  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    ||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||| || | ||||||| ||||||||    
T  23027281 tcagaaatcgtcgggtttgatgcaaccgttgtttgtgccggagtggaagtgggatagtatctttatggattttgttgga 23027359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 15077831 - 15078005
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||| || |||||| |||||||    
T  15077831 atcaggatttgaagaggttgttttggtggcctagaatgaagaaggaaattgctgagtttgtatatgcttgtttggtttgtcaaaagtcgaagattgaaca 15077930  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
     |||| || ||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||| ||||    
T  15077931 ccagaaactgtcgggtttgatgcaactgttgtttgtgccagagtggaagtgggatagtatctctatggattttgt 15078005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 22 - 195
Target Start/End: Complemental strand, 21928016 - 21927843
Alignment:
Q  22 gatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    |||||||| |||| |||||||||||||||||||||||||||||| || || ||||| |||||||||||||||||||| || |||||| ||||||||||||    
T  21928016 gatttgaagaggtcgttttggtggcctggaatgaagaaggagatcgcggaatttgtttatgcttgtttggtttgtcaaaagtcgaagattgaacatcaga 21927917  T
Q  122 gaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||| || ||||||||  ||||||||    
T  21927916 gaccgttgagtttgatgcaaccgttgtttgtgccagagtggaagtgggatagtatctctatggactttgttgga 21927843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 16098866 - 16098688
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| | ||||||||||||||| |||||||||||||| ||||| |||||||| |||||||||||||||||||| || |||||| |||||||    
T  16098866 atcaggatttgaagaagttgttttggtggcccggaatgaagaaggaaattgcggagtttgtctatgcttgtttggtttgtcataagtcgaagattgaaca 16098767  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    ||||| ||||||| |||||||||||| |||||| |||| ||||||||||||||||||||||||||||||  ||||||||    
T  16098766 tcagaaaccgtcgagtttgatgcaactgttgttcgtgctagagtggaagtgggatagcatttctatggactttgttgga 16098688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 35275551 - 35275622
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtt 88  Q
    |||| |||||||| ||||||||||||||||||| |||||||||||| |||||||| ||||| ||||||||||    
T  35275551 atcaggatttgaagaggttgttttggtggcctgaaatgaagaaggaaattgctgaatttgtctatgcttgtt 35275622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 14380988 - 14381106
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    ||||||||||| ||||||  ||||||||| || ||||||||||||||||| ||  | || ||| ||  |||||||  |||||| ||||||||||| ||||    
T  14380988 tttgtgtatgcatgtttgacttgtcagaagtctaaggttgaacatcagaggcctgcaggattgttgacaccgttggatgtgccggagtggaagtgagata 14381087  T
Q  173 gcatttctatggatattgt 191  Q
    |||||||||||||| ||||    
T  14381088 gcatttctatggattttgt 14381106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 191
Target Start/End: Complemental strand, 15460136 - 15459978
Alignment:
Q  33 gttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggt 132  Q
    ||||||||||||| ||||| ||||||||||  | ||   |||||||||||| ||||||  ||||||||| || ||| ||||||||||||  ||  | ||     
T  15460136 gttgttttggtggtctggattgaagaaggatgtcgcgcggtttgtgtatgcgtgtttgacttgtcagaagtctaagattgaacatcagaagcctgcagga 15460037  T
Q  133 ttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    ||| ||  |||||||  | | || |||||||| ||||||||||||||||||||| ||||    
T  15460036 ttgttgacaccgttggatataccggagtggaaatgggatagcatttctatggattttgt 15459978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 20636820 - 20636870
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||||| |||||||| |||||||||||||||||||||| |||||||    
T  20636820 agtttgtgtattcttgtttgatttgtcagaaatcgaaggttgagcatcaga 20636870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 19865449 - 19865329
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtggga 170  Q
    ||||||||||| | ||||||||||||||||| |||||| |||||||||||| |||  | ||| |||||  | | ||   ||||||||||||||| |||||    
T  19865449 agtttgtgtattcctgtttggtttgtcagaagtcgaagattgaacatcagaaacctgctggtatgatggtatctttagatgtgccagagtggaaatggga 19865350  T
Q  171 tagcatttctatggatattgt 191  Q
    ||| || || |||||| ||||    
T  19865349 tagtatatccatggattttgt 19865329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 22078209 - 22078259
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||||| |||||||| |||||||||| ||||||||||| |||||||    
T  22078209 agtttgtgtattcttgtttgatttgtcagaagtcgaaggttgagcatcaga 22078259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 34645099 - 34645220
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaa 164  Q
    ||||| ||||||| ||||| ||||||  ||||||||| || ||||||||||||||||| ||  | || ||| ||  ||| |||  ||| || ||||||||    
T  34645099 ttgctcagtttgtatatgcgtgtttgacttgtcagaagtcaaaggttgaacatcagaggcctgcagggttgttgacaccattggatgtaccggagtggaa 34645198  T
Q  165 gtgggatagcatttctatggat 186  Q
     |||||||| ||||||||||||    
T  34645199 atgggatagtatttctatggat 34645220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 121
Target Start/End: Original strand, 27330954 - 27331002
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||| |||||||| |||||||||| ||||||||||| |||||||    
T  27330954 tttgtgtattcttgtttgatttgtcagaagtcgaaggttgagcatcaga 27331002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 121
Target Start/End: Original strand, 27391694 - 27391742
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||| |||||||| |||||||||| ||||||||||| |||||||    
T  27391694 tttgtgtattcttgtttgatttgtcagaagtcgaaggttgagcatcaga 27391742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 5838738 - 5838788
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||||| |||||||| |||||||||| |||||||| || |||||||    
T  5838738 agtttgtgtattcttgtttgatttgtcagaagtcgaaggtcgagcatcaga 5838788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 17416178 - 17416128
Alignment:
Q  141 accgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    |||||||  |||||| |||||||||||||||| ||||||||||||| ||||    
T  17416178 accgttggatgtgccggagtggaagtgggataacatttctatggattttgt 17416128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 18407461 - 18407511
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||| ||||| |||||||| |||||||||| ||||||||||| |||||||    
T  18407461 agtttttgtattcttgtttgatttgtcagaagtcgaaggttgagcatcaga 18407511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 27566501 - 27566619
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    ||||||||| | ||||| ||||||||||| |||||| |||||||||||| |||  | ||| |||||  | | ||   ||||||||| |||||||||||||    
T  27566501 tttgtgtattcctgtttagtttgtcagaagtcgaagattgaacatcagaaacctgctggtatgatggtatctttagatgtgccagaatggaagtgggata 27566600  T
Q  173 gcatttctatggatattgt 191  Q
    | || || |||||| ||||    
T  27566601 gtatatccatggattttgt 27566619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 182
Target Start/End: Complemental strand, 19435770 - 19435653
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaa 164  Q
    ||||| ||||| ||||||| ||||||  ||||||||| || ||||||||||||||||  ||  | || ||| ||  |||||||  ||| || ||||||||    
T  19435770 ttgctcagtttatgtatgcgtgtttgacttgtcagaagtctaaggttgaacatcagaagcctgcagggttgttgacaccgttggatgtaccggagtggaa 19435671  T
Q  165 gtgggatagcatttctat 182  Q
    |||||| || ||||||||    
T  19435670 gtgggacagtatttctat 19435653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 73 - 186
Target Start/End: Complemental strand, 19880058 - 19879945
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    ||||||||||| ||||||  ||| ||||| || || |||||||||||||  ||  | || ||| ||  ||| |||  ||| ||||||||||| |||||||    
T  19880058 tttgtgtatgcctgtttgacttgccagaagtctaaagttgaacatcagaagcctgcagggttgttgacaccattggatgtaccagagtggaaatgggata 19879959  T
Q  173 gcatttctatggat 186  Q
    ||||||||||||||    
T  19879958 gcatttctatggat 19879945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 163; Significance: 3e-87; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 21936690 - 21936868
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  21936690 atcaggatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtttatgcttgtttggtttgtcagaaatcgaagattgaaca 21936789  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  21936790 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggattttgttgga 21936868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 24582076 - 24581898
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||    
T  24582076 atcaggatttgaaaaggttgttttggtggcctgtaatgaagaaggagattgctgagtttgtttatgcttgtttggtttgtcagaaatcaaagattgaaca 24581977  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24581976 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggattttgttgga 24581898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 17 - 194
Target Start/End: Complemental strand, 27011950 - 27011773
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||    
T  27011950 atcaggatttgaaaaggttgttttggtggtctggaatgaagaaggagattactgagtttgtttatgcttgtttggtttgtcagaaatcgaagattgaaca 27011851  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgg 194  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||    
T  27011850 tcagagaacgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgagatagcatttctatggactttgttgg 27011773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 23504308 - 23504130
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||    
T  23504308 atcaagatttgaagaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtttatgcttgtttggtttgtcaaaaatcgaagattgaaca 23504209  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| || | ||||||| ||||||||    
T  23504208 tcagagaccgtcgggtttgatgcaactgttgtttgtgccagagtggaattgggatagtatctttatggattttgttgga 23504130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 195
Target Start/End: Original strand, 19566207 - 19566369
Alignment:
Q  33 gttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggt 132  Q
    ||||||||||||||| |||||||||| |||  | ||||||||| |||||| |||||| |||||||||||||| ||| |||| |||||||  ||||| |      
T  19566207 gttgttttggtggccaggaatgaagagggatgtagctgagtttttgtatgattgtttcgtttgtcagaaatctaagattgagcatcagaagccgtctgaa 19566306  T
Q  133 ttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
     ||||||||||||||||||||||||||||||| |||||||| ||||| |||||  ||||||||    
T  19566307 atgatgcaaccgttgtttgtgccagagtggaattgggatagtatttcgatggactttgttgga 19566369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 171
Target Start/End: Original strand, 25243852 - 25244006
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||||||||| || | |||||||||| |||||||| |||||||||| ||   |||||||||| ||||||||||| |||||||||| || ||| |||||||    
T  25243852 atcaagatttaaagatgttgttttggcggcctggagtgaagaaggatataaatgagtttgtgcatgcttgtttgatttgtcagaagtctaagattgaaca 25243951  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggat 171  Q
    |||||   | |||||||||||||||||||||||||||| |||||||||| |||||    
T  25243952 tcagaagtcatcgggtttgatgcaaccgttgtttgtgctagagtggaagcgggat 25244006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 171
Target Start/End: Original strand, 25308004 - 25308158
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||||||||| || | |||||||||| |||||||| |||||||||| ||   |||||||||| ||||||||||| |||||||||| || ||| |||||||    
T  25308004 atcaagatttaaagatgttgttttggcggcctggagtgaagaaggatataaatgagtttgtgcatgcttgtttgatttgtcagaagtctaagattgaaca 25308103  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggat 171  Q
    |||||   | |||||||||||||||||||||||||||| |||||||||| |||||    
T  25308104 tcagaagtcatcgggtttgatgcaaccgttgtttgtgctagagtggaagcgggat 25308158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 20774625 - 20774451
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    ||||||| ||||| | ||||||||||||| ||||  ||||||||||  | |||  |||||||||||| ||||||  ||| ||||| || || ||||||||    
T  20774625 atcaagacttgaagaagttgttttggtggtctggtttgaagaaggatgtcgctcggtttgtgtatgcatgtttgacttgccagaagtctaaagttgaaca 20774526  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    |||||| ||  | |||||| ||  |||||||  ||| || |||||||| ||||||||||||||||||||| ||||    
T  20774525 tcagaggcccgcaggtttgttgacaccgttggatgtaccggagtggaaatgggatagcatttctatggattttgt 20774451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 28894444 - 28894618
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    ||||||| ||||| | ||||||||||||| ||||  ||||||||||  | |||  |||||||||||| ||||||  ||| ||||| || || ||||||||    
T  28894444 atcaagacttgaagaagttgttttggtggtctggtttgaagaaggatgtcgctcggtttgtgtatgcatgtttgacttgccagaagtctaaagttgaaca 28894543  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    |||||| ||  | |||||| ||  |||||||  ||| || |||||||| |||||||| |||||||||||| ||||    
T  28894544 tcagaggcccgcaggtttgttgacaccgttggatgtaccggagtggaaatgggatagtatttctatggattttgt 28894618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 28915915 - 28916089
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    ||||||| ||||| | ||||||||||||| ||||  ||||||||||  | |||  |||||||||||| ||||||  ||| ||||| || || ||||||||    
T  28915915 atcaagacttgaagaagttgttttggtggtctggtttgaagaaggatgtcgctcggtttgtgtatgcatgtttgacttgccagaagtctaaagttgaaca 28916014  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    |||||| ||  | |||||| ||  |||||||  ||| || |||||||| |||||||| |||||||||||| ||||    
T  28916015 tcagaggcccgcaggtttgttgacaccgttggatgtaccggagtggaaatgggatagtatttctatggattttgt 28916089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 28923270 - 28923444
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    ||||||| ||||| | ||||||||||||| ||||  ||||||||||  | |||  |||||||||||| ||||||  ||| ||||| || || ||||||||    
T  28923270 atcaagacttgaagaagttgttttggtggtctggtttgaagaaggatgtcgctcggtttgtgtatgcatgtttgacttgccagaagtctaaagttgaaca 28923369  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    |||||| ||  | |||||| ||  |||||||  ||| || |||||||| |||||||| |||||||||||| ||||    
T  28923370 tcagaggcccgcaggtttgttgacaccgttggatgtaccggagtggaaatgggatagtatttctatggattttgt 28923444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 35 - 191
Target Start/End: Complemental strand, 22462800 - 22462644
Alignment:
Q  35 tgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggttt 134  Q
    ||||||||||| ||||  |||||||||   | |||  |||||||||||| ||||||  ||||||||| || ||||||||||||||||| ||  | |||||    
T  22462800 tgttttggtggtctggtttgaagaaggctgtcgctcggtttgtgtatgcgtgtttgacttgtcagaagtctaaggttgaacatcagaggcctgcaggttt 22462701  T
Q  135 gatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    | ||  |||||||   || ||||||||||| ||||||| ||||||||||||| ||||    
T  22462700 gttgacaccgttggaggtaccagagtggaaatgggatatcatttctatggattttgt 22462644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 186
Target Start/End: Complemental strand, 20822303 - 20822150
Alignment:
Q  33 gttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggt 132  Q
    ||||||||||||| | ||| ||||||||||  | ||   |||||||||||| ||||||  |||||| || || ||||||||||||||||| ||  ||||     
T  20822303 gttgttttggtggtccggattgaagaaggatgtcgcacggtttgtgtatgcgtgtttgacttgtcaaaagtctaaggttgaacatcagaggcctgcggga 20822204  T
Q  133 ttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggat 186  Q
    ||| ||  |||||||  ||| || |||||||| |||||||| ||||||||||||    
T  20822203 ttgttgacaccgttggatgtaccggagtggaaatgggatagtatttctatggat 20822150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 22235478 - 22235596
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagacc-gtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggat 171  Q
    ||||||||||| ||||||  ||||||||| || ||||||||||||||||  || || ||||| | ||  |||||||  |||||| ||||||||||| |||    
T  22235478 tttgtgtatgcatgtttgacttgtcagaagtctaaggttgaacatcagaagcctgtagggtt-gttgacaccgttggatgtgccggagtggaagtgagat 22235576  T
Q  172 agcatttctatggatattgt 191  Q
    ||||||||||||||| ||||    
T  22235577 agcatttctatggattttgt 22235596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 121
Target Start/End: Complemental strand, 25424019 - 25423969
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||||| |||||||| |||||||||||||||||||||| |||||||    
T  25424019 agtttgtgtattcttgtttgatttgtcagaaatcgaaggttgagcatcaga 25423969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 17268892 - 17269010
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    ||||||||||| |||||   ||| ||||| || |||||||| ||||||| |||  | || ||| ||  |||||||  ||| ||||||||||| |||||||    
T  17268892 tttgtgtatgcatgtttaacttgccagaagtctaaggttgaccatcagaaacctgcaggattgttgacaccgttggatgtaccagagtggaaatgggata 17268991  T
Q  173 gcatttctatggatattgt 191  Q
    |||||||||||||| ||||    
T  17268992 gcatttctatggattttgt 17269010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 35 - 121
Target Start/End: Original strand, 37542901 - 37542987
Alignment:
Q  35 tgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||||| | || ||||| | |||  ||||| ||||||| ||||| ||||||||||||||||| || |||||||| |||||||    
T  37542901 tgttttggtggtccggtatgaaaagggatgttgctcagtttgtttatgcctgtttggtttgtcagaagtccaaggttgagcatcaga 37542987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 20343100 - 20343044
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||| ||||||| ||||| |||||| |||||||||| || ||||||||||||||||    
T  20343100 ttgctcagtttgtttatgcctgtttgatttgtcagaagtccaaggttgaacatcaga 20343044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 21680280 - 21680384
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||||| | ||||||||||||||||  |||||   ||  ||||| | ||||||||||| ||||||  ||| ||||| || |||||||||||    
T  21680280 atcacgatttgaaaaagctgttttggtggcctggtttgaagcgtgatgttgctcaatttgtgtatgcatgtttgacttgccagaagtctaaggttgaaca 21680379  T
Q  117 tcaga 121  Q
    |||||    
T  21680380 tcaga 21680384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 23574567 - 23574447
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtggga 170  Q
    ||||||||||| | ||||| ||||||||||| |||||| |||||||||||| |||  | ||| |||||  | | ||   ||||||||||||||| |||||    
T  23574567 agtttgtgtattcctgtttagtttgtcagaagtcgaagattgaacatcagaaacctgctggtatgatggtatctttagatgtgccagagtggaaatggga 23574468  T
Q  171 tagcatttctatggatattgt 191  Q
    ||| || || |||||| ||||    
T  23574467 tagtatatccatggattttgt 23574447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 121
Target Start/End: Complemental strand, 18776600 - 18776550
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||||| ||||||| ||||||||||| |||||| |||| |||||||    
T  18776600 agtttgtgtattcttgtttagtttgtcagaagtcgaagattgagcatcaga 18776550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 23441038 - 23440920
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    ||||||||| ||||||| |||||||| || |||||| |||||||||||| |||  | ||| |||||  | | ||   ||||||||||||||| |||||||    
T  23441038 tttgtgtattcttgtttagtttgtcataagtcgaagattgaacatcagaaacctgctggtatgatggtatctttagatgtgccagagtggaaatgggata 23440939  T
Q  173 gcatttctatggatattgt 191  Q
    | || || |||||| ||||    
T  23440938 gtatatccatggattttgt 23440920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 163; Significance: 3e-87; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 30138387 - 30138209
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  30138387 atcaggatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtttatgcttgtttggtttgtcagaaatcgaagattgaaca 30138288  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30138287 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggattttgttgga 30138209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 30147938 - 30147760
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  30147938 atcaggatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtttatgcttgtttggtttgtcagaaatcgaagattgaaca 30147839  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30147838 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggattttgttgga 30147760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 16257725 - 16257547
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||| |||| ||    
T  16257725 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagaccgctgagtttgtttatgcttgtttggtttgtcagaaatcgaagattgatca 16257626  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  16257625 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggataacatttctatggattttgttgga 16257547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 16742262 - 16742440
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  16742262 atcaagatttgaaaaggttgttttggtggcttggaatgaagaaggagatcgctgagtttgtttatgcttgtttggtttgtcagaaatcgaagattgaaca 16742361  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  16742362 tcagagaccgtcaggtttgatgcaaccgttgtttgtgccagagtggaagtggaatagcatttctatggattttgttgga 16742440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 13966899 - 13967077
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  13966899 atcaggatttgaaaaggttgttttggtggcctggaatgaagaaggaaatcgctgagtttgtttatgcttgtttggtttgtcagaaatcgaagattgaaca 13966998  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13966999 tcaaagaccatcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggattttgttgga 13967077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 8273958 - 8274136
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||| ||| |||||||    
T  8273958 atcaggatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtttattcttgcttggtttgtcagaaatcaaagattgaaca 8274057  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8274058 tcagagaccgtcgggtttgatgcaaccattctttgtgccagagtggaagtgggatagcatttctatggattttgttgga 8274136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 17 - 194
Target Start/End: Original strand, 6152410 - 6152587
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||| ||||||||||| |||||| |||||||    
T  6152410 atcaggatttgaagaggttgttttggtggcctggaatgaagaaggaaattgctgagtttgtttatgtttgtttagtttgtcagaagtcgaagattgaaca 6152509  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgg 194  Q
    ||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||| || ||||||||| |||||||    
T  6152510 tcaaagaccgtcgggtttgatgcaaccgttgtttgtgcttgagtggaagtgggatagtatctctatggattttgttgg 6152587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 23 - 195
Target Start/End: Complemental strand, 17193669 - 17193497
Alignment:
Q  23 atttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagag 122  Q
    ||||||| |||||||||||||||| ||||||||| ||||| ||||| |||||||| |||||||||||| |||||||||| |||||| ||||||||||||     
T  17193669 atttgaagaggttgttttggtggcttggaatgaacaaggaaattgcagagtttgtttatgcttgtttgatttgtcagaagtcgaagattgaacatcagaa 17193570  T
Q  123 accgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    ||| |||||||||||||||  |||||||||||||||||||||||||||||| || ||||||||| ||||||||    
T  17193569 accatcgggtttgatgcaaatgttgtttgtgccagagtggaagtgggatagtatctctatggattttgttgga 17193497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 17 - 172
Target Start/End: Original strand, 6711968 - 6712123
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||| || || ||||| ||||||||||||||||||||||| || ||| |||||||    
T  6711968 atcaggatttgaagaggttgttttggtggcctggaatgaagaaggagatcgcggaatttgtttatgcttgtttggtttgtcagaagtctaagattgaaca 6712067  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    ||||| | |||||||||||||||||  |||||||||||||||||||||||||||||    
T  6712068 tcagaaatcgtcgggtttgatgcaattgttgtttgtgccagagtggaagtgggata 6712123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 17 - 148
Target Start/End: Complemental strand, 15610684 - 15610554
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||| |||||||    
T  15610684 atcaggatttgaaaaggttgttt-ggtggcctggaatgaagaaggagatcgctgagtctgtttatgcttgtttggtttgtcagaaatcgaagattgaaca 15610586  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgt 148  Q
    ||||||||| ||||||||||||||||||||||    
T  15610585 tcagagaccatcgggtttgatgcaaccgttgt 15610554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 169
Target Start/End: Complemental strand, 15095581 - 15095434
Alignment:
Q  22 gatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||| || |||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||| ||| || |||||| |||||||||| |    
T  15095581 gatttaaagaggttgttttggtggcctggaatgaagaaggatatagcagagtttgtgtatgcttgtttggtttttcaaaagtcgaagattgaacatcaaa 15095482  T
Q  122 gaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtggg 169  Q
       ||||||||||||||||||||||||||||||| | |||||||||||    
T  15095481 agtcgtcgggtttgatgcaaccgttgtttgtgcctgcgtggaagtggg 15095434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 18749246 - 18749078
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| |||||||||| |||||||||||||| ||||||||| || || ||||| ||| |||||||||||||| |||| |||||| |||||||    
T  18749246 atcaggatttgaagaggttgttttagtggcctggaatgatgaaggagatcgcggaatttgtttattcttgtttggtttgttagaagtcgaagattgaaca 18749147  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatgga 185  Q
     || | |||||||| ||||||||||||||||||| ||||||||||||| || ||||| || ||||||||    
T  18749146 acataaaccgtcggttttgatgcaaccgttgtttttgccagagtggaaatgagatagtatctctatgga 18749078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 70 - 195
Target Start/End: Original strand, 266907 - 267032
Alignment:
Q  70 gagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtggg 169  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||| || |   | | ||||||||||||||| |||||||| || |||||||||||||    
T  266907 gagtttgtgtatgcttgtttggtttgtcagaagtcgaagattgaacaccaaaagtcattgggtttgatgcaaccattgtttgtaccggagtggaagtggg 267006  T
Q  170 atagcatttctatggatattgttgga 195  Q
    |||  ||||||||| || ||||||||    
T  267007 ataatatttctatgaattttgttgga 267032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 191
Target Start/End: Complemental strand, 17493151 - 17493037
Alignment:
Q  77 tgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcat 176  Q
    ||||||| ||||||  |||||||||||| ||||||||||||||||  ||  | || ||| ||  |||||||  ||| ||||||| |||||||||||||||    
T  17493151 tgtatgcatgtttgacttgtcagaaatctaaggttgaacatcagaagcctgcagggttgttgacaccgttggatgtaccagagttgaagtgggatagcat 17493052  T
Q  177 ttctatggatattgt 191  Q
    |||||||||| ||||    
T  17493051 ttctatggattttgt 17493037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 17490373 - 17490317
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||| ||||||||||| |||||||| |||||||||||||||||||||| |||||||    
T  17490373 ttgcttagtttgtgtattcttgtttgatttgtcagaaatcgaaggttgagcatcaga 17490317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 191
Target Start/End: Original strand, 10419609 - 10419767
Alignment:
Q  33 gttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggt 132  Q
    ||||||||||||| || || ||||||||||  | ||   |||||||||||| ||||||  |||||| || || ||||||||||||||||  ||  ||||     
T  10419609 gttgttttggtggtctagattgaagaaggatgtcgcgcggtttgtgtatgcgtgtttgacttgtcaaaagtctaaggttgaacatcagaagcctgcggga 10419708  T
Q  133 ttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    ||| ||  |||||||  | | || |||||||| ||||||||||||||||||||| ||||    
T  10419709 ttgttgacaccgttggatataccggagtggaaatgggatagcatttctatggattttgt 10419767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 14087254 - 14087080
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||||| | ||||||||||||||||  |||||   ||  ||||| | ||||||||||| ||||||  ||| ||||| || |||||||||||    
T  14087254 atcacgatttgaaaaagctgttttggtggcctggtttgaagcgtgatgttgctcaatttgtgtatgcatgtttgacttgccagaagtctaaggttgaaca 14087155  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    ||||| |||  | || ||| ||  ||| |||  ||| || |||||||| |||||||| |||||||||||| ||||    
T  14087154 tcagaaacctgcagggttgttgacaccattggatgtaccggagtggaaatgggatagtatttctatggattttgt 14087080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 18133950 - 18134068
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    ||||||||||| ||||||  ||||||||| || |||||||||||| |||  ||  | || ||| ||  |||||||  |||||| ||||||||||||||||    
T  18133950 tttgtgtatgcatgtttgacttgtcagaagtctaaggttgaacattagaagcctgcagggttgttgacaccgttggatgtgccggagtggaagtgggata 18134049  T
Q  173 gcatttctatggatattgt 191  Q
    ||||||| |||||| ||||    
T  18134050 gcatttcaatggattttgt 18134068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 44777828 - 44777654
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||||| | ||||||||||| ||||  |||||   ||  ||||| | ||||||||||| |||||   ||||||||| || |||||||||||    
T  44777828 atcacgatttgaaaaagctgttttggtggtctgggttgaagcgagatgttgctcattttgtgtatgcatgtttaacttgtcagaagtctaaggttgaaca 44777729  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    |||||  ||  | || ||| ||  ||| |||  ||| ||||||||||| ||||||||||||||||||||| ||||    
T  44777728 tcagaagcccgcaggattgttgacaccattggatgtaccagagtggaaatgggatagcatttctatggattttgt 44777654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 172
Target Start/End: Original strand, 16491794 - 16491895
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtggga 170  Q
    ||||||||||| |||||||| |||||||||| ||||||||||| ||||||| |||  | ||| |||||  | ||||   ||||||||||||||| |||||    
T  16491794 agtttgtgtattcttgtttgatttgtcagaagtcgaaggttgagcatcagaaacctgctggtatgatggtatcgttagatgtgccagagtggaaatggga 16491893  T
Q  171 ta 172  Q
    ||    
T  16491894 ta 16491895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 9523236 - 9523116
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtggga 170  Q
    ||||||||||| |||||||| |||||||||| ||||| ||||| ||||||| |||  | ||| |||||  ||| ||   ||||||||||||||| |||||    
T  9523236 agtttgtgtattcttgtttgatttgtcagaagtcgaaagttgagcatcagaaacctgctggtatgatgataccattagatgtgccagagtggaaatggga 9523137  T
Q  171 tagcatttctatggatattgt 191  Q
    ||| || || |||||| ||||    
T  9523136 tagtatatccatggattttgt 9523116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 15577205 - 15577153
Alignment:
Q  143 cgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    |||||||||||||||| ||||| ||||||| ||||||||||||| ||||||||    
T  15577205 cgttgtttgtgccagattggaaatgggataacatttctatggattttgttgga 15577153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 16371930 - 16371810
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtggga 170  Q
    ||||||||||| ||||||| ||||||||||| |||||| |||||||||||| |||  | ||| |||||  | | ||   ||||||||||||||| |||||    
T  16371930 agtttgtgtattcttgtttagtttgtcagaagtcgaagattgaacatcagaaacctgctggtatgatggtatctttagatgtgccagagtggaaatggga 16371831  T
Q  171 tagcatttctatggatattgt 191  Q
    ||| || || |||||| ||||    
T  16371830 tagtatatccatggattttgt 16371810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 12498763 - 12498645
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    ||||||||| ||||||| ||||||||||| |||||| || ||||||||| |||  | ||| |||||  | ||||   ||||||||| ||||| |||||||    
T  12498763 tttgtgtattcttgtttagtttgtcagaagtcgaagattaaacatcagaaacctgctggtatgatggtatcgttagatgtgccagaatggaaatgggata 12498664  T
Q  173 gcatttctatggatattgt 191  Q
    | || ||||||||| ||||    
T  12498663 gtatatctatggattttgt 12498645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 71 - 121
Target Start/End: Complemental strand, 15062261 - 15062211
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||||| ||||||| ||||||||||| |||||| ||||||||||||    
T  15062261 agtttgtgtattcttgtttagtttgtcagaagtcgaagattgaacatcaga 15062211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 14574371 - 14574330
Alignment:
Q  150 tgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    |||||||||||||||||||||||||||||| |||||| ||||    
T  14574371 tgtgccagagtggaagtgggatagcatttccatggattttgt 14574330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 65 - 191
Target Start/End: Original strand, 11303369 - 11303495
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcag-agaccgtcgggtttgatgcaaccgttgtttgtgccagagtgga 163  Q
    ||||| ||||||||||||| ||||||  ||||||||| || |||||||| |||||| ||   || ||| ||| ||  |||||||  |||||| |||||||    
T  11303369 ttgctcagtttgtgtatgcgtgtttgacttgtcagaagtctaaggttgagcatcagaagcttgtaggg-ttgttgacaccgttggatgtgccggagtgga 11303467  T
Q  164 agtgggatagcatttctatggatattgt 191  Q
    ||||||| | ||||||||||||| ||||    
T  11303468 agtgggacaacatttctatggattttgt 11303495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 12360223 - 12360264
Alignment:
Q  150 tgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    |||||| |||||||||||||||| ||||||||||||| ||||    
T  12360223 tgtgccggagtggaagtgggataacatttctatggattttgt 12360264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 16836191 - 16836232
Alignment:
Q  150 tgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    |||||| |||||||| ||||||||||||||||||||| ||||    
T  16836191 tgtgccggagtggaaatgggatagcatttctatggattttgt 16836232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 186
Target Start/End: Original strand, 16380613 - 16380645
Alignment:
Q  154 ccagagtggaagtgggatagcatttctatggat 186  Q
    ||||||||||| |||||||||||||||||||||    
T  16380613 ccagagtggaaatgggatagcatttctatggat 16380645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 163; Significance: 3e-87; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 20830784 - 20830962
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  20830784 atcaggatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtttatgcttgtttggtttgtcagaaatcgaagattgaaca 20830883  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20830884 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggattttgttgga 20830962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 17 - 194
Target Start/End: Original strand, 22134949 - 22135126
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| || ||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||| | |||| |||||||    
T  22134949 atcaggatttgaagagcttgttttggtggcctggaatgaagaaggagattgcggaatttgtttatgcttgtttggtttgtcagaagttgaagattgaaca 22135048  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgg 194  Q
    | | | |||||||||||||||||||| ||||||||||||| ||| |||||||||||| || ||||||||  |||||||    
T  22135049 taaaaaaccgtcgggtttgatgcaactgttgtttgtgccacagtagaagtgggatagtatctctatggactttgttgg 22135126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 21201683 - 21201849
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtt---tggtttgtcagaaatcgaaggttga 113  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||     ||| | | ||| ||| ||   || ||||| |||| |||||  ||||    
T  21201683 atcaggatttgaaaaggttgttttggtggcctggaatgaagaaggatat-----agtatctctatccttcttatttgatttgttagaagtcgaaaattga 21201777  T
Q  114 acatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatgga 185  Q
    ||||||||  || ||| ||||||||||||| ||||||||||||||||||||||||||||| || ||||||||    
T  21201778 acatcagaagccatcgagtttgatgcaaccattgtttgtgccagagtggaagtgggatagtatctctatgga 21201849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 19855272 - 19855098
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| | | ||||||||||| ||||  ||||   ||| |||||| |  |||||||||| ||||||  ||||||||| || |||||||| ||    
T  19855272 atcatgatttgaagacgctgttttggtggtctgggttgaaacgggatattgctcaaattgtgtatgcatgtttgacttgtcagaagtctaaggttgagca 19855173  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    |||||  ||  |||| ||| ||  |||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  19855172 tcagaagcctgcggggttgttgacaccgttggatgtgccagagtggaagtgggatagcatttctatggattttgt 19855098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 65 - 191
Target Start/End: Original strand, 20835328 - 20835454
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaa 164  Q
    ||||| ||||||||||||| ||||||  ||||||||  || ||||||||||||||||  ||  | || ||| ||  |||||||  |||||| ||||||||    
T  20835328 ttgctcagtttgtgtatgcatgtttgacttgtcagatgtctaaggttgaacatcagaagcctgcagggttgttgacaccgttggatgtgccggagtggaa 20835427  T
Q  165 gtgggatagcatttctatggatattgt 191  Q
    |||||||||||||||||||||| ||||    
T  20835428 gtgggatagcatttctatggattttgt 20835454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 22361690 - 22361740
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||||| |||||||| |||||||||||||||||||||| |||||||    
T  22361690 agtttgtgtattcttgtttgatttgtcagaaatcgaaggttgagcatcaga 22361740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 191
Target Start/End: Original strand, 20856208 - 20856327
Alignment:
Q  72 gtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggat 171  Q
    |||||||||||| |||||   |||| |||| || ||||||||||||||||| ||  | |||||| ||  |||||||   || ||||||||||| ||||||    
T  20856208 gtttgtgtatgcgtgtttcacttgttagaagtctaaggttgaacatcagaggcctgcaggtttgttgacaccgttggaggtaccagagtggaaatgggat 20856307  T
Q  172 agcatttctatggatattgt 191  Q
    | ||||||||||||| ||||    
T  20856308 atcatttctatggattttgt 20856327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 20939511 - 20939629
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    ||||||||||| ||||||  ||||||||| || ||||||||||||||||  ||  | || ||| ||  |||||||  |||||| |||||||||||||||     
T  20939511 tttgtgtatgcatgtttgacttgtcagaagtctaaggttgaacatcagaagcctgcagggttgttgacaccgttggatgtgccggagtggaagtgggatt 20939610  T
Q  173 gcatttctatggatattgt 191  Q
      |||||||||||| ||||    
T  20939611 ttatttctatggattttgt 20939629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 121
Target Start/End: Complemental strand, 21749852 - 21749804
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||| |||||||| |||||||||| ||||||||||| |||||||    
T  21749852 tttgtgtattcttgtttgatttgtcagaagtcgaaggttgagcatcaga 21749804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 22432632 - 22432682
Alignment:
Q  141 accgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    |||||||  ||| ||||||||||| ||||||||||||||||||||| ||||    
T  22432632 accgttggatgtaccagagtggaaatgggatagcatttctatggattttgt 22432682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 159; Significance: 7e-85; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 21 - 195
Target Start/End: Original strand, 24831051 - 24831225
Alignment:
Q  21 agatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcag 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  24831051 agatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtttatgcttgtttggtttgtcagaaatcgaagattgaacatcag 24831150  T
Q  121 agaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  24831151 agaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatttcgttgga 24831225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 17 - 193
Target Start/End: Original strand, 12640093 - 12640269
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||| ||| |||||||    
T  12640093 atcaggatttgaagaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtttattcttgcttggtttgtcagaaatcaaagattgaaca 12640192  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttg 193  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  12640193 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccaaagtggaagtgggatagcatttctatggattttgttg 12640269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 24569528 - 24569706
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  24569528 atcaggatttgaagaggttgttttggtggcctggaatgaagaaggaaattgctgagtttgtatatgcttgtttggtttgttagaaatcgaagattgaaca 24569627  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  24569628 tcagaaaccgtcgggtttgatgcaactgttgtttgtgccagagtggaagtgggataacatttctatggacattgttgga 24569706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 22276861 - 22276683
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    ||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||    
T  22276861 atcaagatttgaagaggttgttttggtggcctaaaatgaagaaggagattgctgagtttgtttatgcttgtttggtttgtcagaaatagaagattgaaca 22276762  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    |||||||||||||||||||||||||||||||||||| ||| | ||||| ||||||||||||||||||||| ||||||||    
T  22276761 tcagagaccgtcgggtttgatgcaaccgttgtttgtaccaaaatggaaatgggatagcatttctatggattttgttgga 22276683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 22761429 - 22761598
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||| ||||||| |||||||||| ||||||||||| |||||||    
T  22761429 atcaagatttgaagaggttgttttggtggcctggaatgaagaaggaaattgcagagtttgtttatgcttctttggtttgttagaaatcgaagattgaaca 22761528  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggat 186  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||    
T  22761529 tcagaaaccgtcgggtttgatgtaaccgttgtttgtgccagagtggaagtgggatatcatctctatggat 22761598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 23 - 195
Target Start/End: Original strand, 23816909 - 23817081
Alignment:
Q  23 atttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagag 122  Q
    ||||||| |||||||||| ||||||||||||||||||||| ||| | |||||||| ||||||||||||||||||||||| |||||| ||||||||||||     
T  23816909 atttgaagaggttgttttagtggcctggaatgaagaaggaaattccagagtttgtttatgcttgtttggtttgtcagaagtcgaagattgaacatcagaa 23817008  T
Q  123 accgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||| ||  |||||||| ||||||||    
T  23817009 accgtcaggtttgatacaaccgttgtttgtgccagagtggaagtgggatagtatcgctatggattttgttgga 23817081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 22 - 195
Target Start/End: Complemental strand, 25129225 - 25129052
Alignment:
Q  22 gatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    |||||||| |||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||||||||||||||| |||||| ||||| |||| |    
T  25129225 gatttgaagaggttgttttggtggcctagaaggaagaaggagattgcagagtttgtttatgcttgtttggtttgtcagaagtcgaagattgaatatcata 25129126  T
Q  122 gaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
     |||||||||||||||||||||||||||| ||||||||||||| |||||||  || ||||||||  ||||||||    
T  25129125 aaccgtcgggtttgatgcaaccgttgtttatgccagagtggaaatgggataatatctctatggactttgttgga 25129052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 21906029 - 21906207
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| ||||| || ||||||||||||| |||||||| ||||||||| || ||| | ||||||||||||||| ||||||||||||| || ||| ||| |||    
T  21906029 atcaggatttaaagaggttgttttggtcgcctggaacgaagaaggatatagctcaatttgtgtatgcttgtgtggtttgtcagaagtctaagattggaca 21906128  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    ||||| ||||||  | |||||||||||||||||||| || ||||||||||| ||||| || |||||| || ||||||||    
T  21906129 tcagaaaccgtcaagcttgatgcaaccgttgtttgtaccggagtggaagtgtgatagtatatctatgaattttgttgga 21906207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 23294462 - 23294344
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    ||||||||||| ||||||  ||||||||| || ||||||||||||||||  ||  | || ||| ||  |||||||  |||||| ||||| ||||||||||    
T  23294462 tttgtgtatgcatgtttgacttgtcagaagtctaaggttgaacatcagaagcctgcagggttgttgacaccgttggatgtgccggagtgaaagtgggata 23294363  T
Q  173 gcatttctatggatattgt 191  Q
    |||||||||||||| ||||    
T  23294362 gcatttctatggattttgt 23294344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 191
Target Start/End: Complemental strand, 24642277 - 24642151
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaa 164  Q
    ||||| ||||||| ||||| ||||||  ||||||||| || |||||||| |||||||  ||  | || ||| ||  |||||||  |||||| ||||||||    
T  24642277 ttgctcagtttgtctatgcatgtttgacttgtcagaagtctaaggttgagcatcagaagcctgcagggttgttggcaccgttggatgtgccggagtggaa 24642178  T
Q  165 gtgggatagcatttctatggatattgt 191  Q
    |||||||||||||||||||||| ||||    
T  24642177 gtgggatagcatttctatggattttgt 24642151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 191
Target Start/End: Original strand, 27210048 - 27210206
Alignment:
Q  33 gttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggt 132  Q
    ||||||||||||| ||||  ||||||||||  | |||   ||||||||||| ||||||  ||||||||| || |||||||| |||||||| ||  | ||     
T  27210048 gttgttttggtggtctggtttgaagaaggatgtcgctcgttttgtgtatgcgtgtttgacttgtcagaagtctaaggttgagcatcagaggcctgcagga 27210147  T
Q  133 ttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    ||| ||  |||||||  ||| || |||||||| ||||||||||||| ||||||| ||||    
T  27210148 ttgttgacaccgttggatgtaccggagtggaaatgggatagcatttatatggattttgt 27210206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 186
Target Start/End: Original strand, 19651968 - 19652081
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    ||||||||||| ||||||  ||||||||| || || |||||||||||||| ||  | || ||| ||  |||||||  |||||| |||||||||||||| |    
T  19651968 tttgtgtatgcatgtttgacttgtcagaagtctaacgttgaacatcagaggcctgcagggttgttgacaccgttggatgtgccggagtggaagtgggaca 19652067  T
Q  173 gcatttctatggat 186  Q
    | ||||||||||||    
T  19652068 gtatttctatggat 19652081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 191
Target Start/End: Original strand, 23107644 - 23107764
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtggga 170  Q
    ||||||||||| | ||||||||||||||||| |||||| |||||||||||| |||  | ||| |||||  | | ||   ||||||||||||||| |||||    
T  23107644 agtttgtgtattcctgtttggtttgtcagaagtcgaagattgaacatcagaaacctgctggtatgatggtatctttagatgtgccagagtggaaatggga 23107743  T
Q  171 tagcatttctatggatattgt 191  Q
    ||| || || |||||| ||||    
T  23107744 tagtatatccatggattttgt 23107764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 1064286 - 1064230
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||| ||||||| ||||| ||||||||||||||||| || |||||||| |||||||    
T  1064286 ttgctcagtttgtttatgcctgtttggtttgtcagaagtccaaggttgagcatcaga 1064230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 21890634 - 21890678
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacat 117  Q
    ||||||||| |||||||| |||||||||| |||||||||||||||    
T  21890634 tttgtgtattcttgtttgatttgtcagaagtcgaaggttgaacat 21890678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 23066958 - 23066870
Alignment:
Q  33 gttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||||||| ||||| ||||    || |||||  |||||||||||  ||||||| |||||||||| ||||||||||| |||||||    
T  23066958 gttgttttggtggtctggattgaaacgcgatattgcacagtttgtgtattattgtttgatttgtcagaagtcgaaggttgagcatcaga 23066870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 22756379 - 22756429
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||||| | |||||||||||| |||| |||||| ||||||||||||    
T  22756379 agtttgtgtattcctgtttggtttgtaagaagtcgaagattgaacatcaga 22756429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 23277226 - 23277185
Alignment:
Q  150 tgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    |||||| || ||||||||||||||||||||||||||| ||||    
T  23277226 tgtgccggaatggaagtgggatagcatttctatggattttgt 23277185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 24707398 - 24707442
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacat 117  Q
    ||||||||| ||||||| ||||||||||| |||||| ||||||||    
T  24707398 tttgtgtattcttgtttagtttgtcagaagtcgaagattgaacat 24707442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 27364939 - 27365043
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||||| | ||||||||||| ||||  |||||   ||  ||||| | ||||||||||| ||||||  ||| ||||| || |||||||||||    
T  27364939 atcacgatttgaaaaagctgttttggtggtctggtttgaagcgtgatgttgctcaatttgtgtatgcatgtttgacttgccagaagtctaaggttgaaca 27365038  T
Q  117 tcaga 121  Q
    |||||    
T  27365039 tcaga 27365043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 121
Target Start/End: Original strand, 30210832 - 30210880
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||||| |||||  |||||||||| ||||| |||||||||||||    
T  30210832 tttgtgtatgcgtgtttaatttgtcagaagtcgaaagttgaacatcaga 30210880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 121
Target Start/End: Original strand, 41608301 - 41608349
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||| | ||||| ||||||||||| ||||| |||||||||||||    
T  41608301 tttgtgtattcctgtttagtttgtcagaagtcgaaagttgaacatcaga 41608349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 121
Target Start/End: Complemental strand, 45530038 - 45529990
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||||| |||||  |||||||||| ||||| |||||||||||||    
T  45530038 tttgtgtatgcgtgtttaatttgtcagaagtcgaaagttgaacatcaga 45529990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 27589 - 27767
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||    
T  27589 atcaagatttgaagaggttgttttggtggcctgggatgaagaaggagattgctgagtttgtttatgcttgtttggtttgtcagaaatcaaagattgaaca 27688  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27689 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggattttgttgga 27767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 155; Significance: 2e-82; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 21850100 - 21850278
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  21850100 atcaagatttgaaaaggttgtttcggtggcctggaatgaagaaggagattgctgagtttgtttatgcttgtttggtttgtcagaaatcgaagattgaaca 21850199  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||    
T  21850200 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccatagtggaaatgggatagcatttctatggattttgttgga 21850278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 16876858 - 16877036
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||  ||||||||||||||||| ||| |||||||    
T  16876858 atcaggatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtttattcttacttggtttgtcagaaatcaaagattgaaca 16876957  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16876958 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggattttgttgga 16877036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 20652096 - 20652264
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||| |||||||    
T  20652096 atcaggatttgaagaggttgttttggtggcctggaatgaagaaggaaattgctgagtttgtgtatgcttgcttggtttgtcagaagtcgaagattgaaca 20652195  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatgga 185  Q
    ||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||| || ||||||||    
T  20652196 tcagaaaccgtcgggtttgatgcaaccattgtttgtgctagagtggaagtgggatagtatctctatgga 20652264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 23156775 - 23156953
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| |||||||||| |||||||||||||||||||||||||||  | ||||||| ||||||||||||||||||||| |||||| |||||||    
T  23156775 atcaggatttgaagaggttgtttttgtggcctggaatgaagaaggagattgcgaaatttgtgtttgcttgtttggtttgtcagaagtcgaagattgaaca 23156874  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| || ||||||||| ||||||||    
T  23156875 tcagagaccgtcgggtttgatgcaaccgttgtttgtaccagattggaagtgggatagtatctctatggattttgttgga 23156953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 21196265 - 21196443
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| | |||||||||||||||||||||||| ||||| |||||  ||||||| ||||||||||||||||||||||| || ||  |||||||    
T  21196265 atcaggatttgaagatgttgttttggtggcctggaatgaaaaaggaaattgcatagtttgtttatgcttgtttggtttgtcagaagtcaaaaattgaaca 21196364  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||| || ||||||||| ||||||||    
T  21196365 tcagaaaccgtcgggtttgatgcaaccgttgtttgtgccatagtggaggtgggatagtatctctatggattttgttgga 21196443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 49 - 195
Target Start/End: Complemental strand, 22983419 - 22983273
Alignment:
Q  49 ggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgt 148  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||| ||||  ||||||||||||||||||||    
T  22983419 ggaatgaagaaggaaattgctgagtttgtatatgcttgtttggtttgtcagaagtcgaagattgaacatcagaaaccgcagggtttgatgcaaccgttgt 22983320  T
Q  149 ttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    |||||||||||||||| |||||||| || ||||||||| ||||||||    
T  22983319 ttgtgccagagtggaattgggatagtatctctatggattttgttgga 22983273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 22316209 - 22316031
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| || ||||||||||||||||||||||||||||||||  | |||||||| ||||||||||||||||||||||| |||||| |||||||    
T  22316209 atcaggatttgaagagattgttttggtggcctggaatgaagaaggagatcacagagtttgtttatgcttgtttggtttgtcagaagtcgaagattgaaca 22316110  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    | ||| | | ||| |||||||||||||||||||||||||||||||||||||||| |  || ||||||||  ||||||||    
T  22316109 ttagaaatcatcgagtttgatgcaaccgttgtttgtgccagagtggaagtgggacaatatctctatggactttgttgga 22316031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 194
Target Start/End: Complemental strand, 25283148 - 25282971
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| | ||||||||||||||| |||||||||||||| ||  | |||||||||||||||||||||||||||||||| || ||| |||||||    
T  25283148 atcaggatttgaagaagttgttttggtggccaggaatgaagaaggatatatcagagtttgtgtatgcttgtttggtttgtcagaagtctaagattgaaca 25283049  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgg 194  Q
    |||||    || ||||||||||||||||||||||||||| |||||||||| |||||| || | ||||||| |||||||    
T  25283048 tcagaagatgtagggtttgatgcaaccgttgtttgtgcctgagtggaagtaggatagtatctatatggattttgttgg 25282971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 33 - 195
Target Start/End: Complemental strand, 22284006 - 22283844
Alignment:
Q  33 gttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggt 132  Q
    |||||||||||||| ||||||||||||||| || |||||||||||||||||||||||| | |||||||| || ||| ||||||||||||   | ||||||    
T  22284006 gttgttttggtggcatggaatgaagaaggatatagctgagtttgtgtatgcttgtttgatctgtcagaagtctaagattgaacatcagaagtcttcgggt 22283907  T
Q  133 ttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    |||| ||||||||||||| | || ||||||||||| ||||  |||| ||||||| ||||||||    
T  22283906 ttgacgcaaccgttgtttattcctgagtggaagtgagataatatttatatggattttgttgga 22283844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 25283374 - 25283205
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| |  |||||||||||||| |||||||||||||| ||    |||||||||||||||||||||||||||||||| || ||| |||||||    
T  25283374 atcaggatttgaagaaattgttttggtggccaggaatgaagaaggatatataggagtttgtgtatgcttgtttggtttgtcagaagtctaagattgaaca 25283275  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggat 186  Q
    |||||    || ||||||||||||||||||||||||||| |||||||||| |||||| || | |||||||    
T  25283274 tcagaagatgtagggtttgatgcaaccgttgtttgtgcctgagtggaagtaggatagtatctatatggat 25283205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 71 - 194
Target Start/End: Original strand, 22366482 - 22366605
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtggga 170  Q
    ||||||||| |||||||||||||||||||||||| ||| | || |||||||  ||||| ||  |||||||||| || |||||||| ||||||||||||||    
T  22366482 agtttgtgtttgcttgtttggtttgtcagaaatctaagatcgagcatcagatgccgtcaggagtgatgcaaccattttttgtgccggagtggaagtggga 22366581  T
Q  171 tagcatttctatggatattgttgg 194  Q
    ||| ||||| |||||| |||||||    
T  22366582 tagtatttcgatggattttgttgg 22366605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 172
Target Start/End: Complemental strand, 23901218 - 23901138
Alignment:
Q  92 tttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    |||||||||| |||||| |||||||||| | | |||||||||||||||||||||||||||||| ||| |||||||||||||    
T  23901218 tttgtcagaagtcgaagattgaacatcataaatcgtcgggtttgatgcaaccgttgtttgtgctagattggaagtgggata 23901138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 121
Target Start/End: Complemental strand, 21043407 - 21043359
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  21043407 tttgtgtattcttgtttggtttgtcagaaatcgaaggttgagcatcaga 21043359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 19978931 - 19978811
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtggga 170  Q
    ||||||||||| | ||||||||||||||||| |||||| |||||||||||| |||  | ||| |||||  | | ||   ||||||||||||||| |||||    
T  19978931 agtttgtgtattcctgtttggtttgtcagaagtcgaagattgaacatcagaaacctgctggtatgatggtatctttagatgtgccagagtggaaatggga 19978832  T
Q  171 tagcatttctatggatattgt 191  Q
    ||| || || |||||| ||||    
T  19978831 tagtatatccatggattttgt 19978811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 194
Target Start/End: Original strand, 22365694 - 22365754
Alignment:
Q  134 tgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgg 194  Q
    |||||||||| ||||||||||| ||||||||||||||||  ||||| |||||| |||||||    
T  22365694 tgatgcaaccattgtttgtgccggagtggaagtgggataatatttcgatggattttgttgg 22365754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 21393682 - 21393732
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    |||||||||||||||||||| |||| ||||| ||||||||||| |||||||    
T  21393682 agtttgtgtatgcttgtttgatttgccagaagtcgaaggttgagcatcaga 21393732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 21788176 - 21788226
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    |||||||||||||||||||| |||| ||||| ||||||||||| |||||||    
T  21788176 agtttgtgtatgcttgtttgatttgccagaagtcgaaggttgagcatcaga 21788226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 21921553 - 21921603
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||||| |||||||| ||||||||||||| |||||||| |||||||    
T  21921553 agtttgtgtattcttgtttgatttgtcagaaatcaaaggttgagcatcaga 21921603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 31416370 - 31416411
Alignment:
Q  150 tgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    |||||| |||||||||||||||||||||||||||||| ||||    
T  31416370 tgtgccggagtggaagtgggatagcatttctatggattttgt 31416411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 191
Target Start/End: Complemental strand, 19868691 - 19868537
Alignment:
Q  37 ttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttga 136  Q
    ||||||||| | || ||||||||||| || || || ||||||||||||||  |  ||||||| || || || || |||||||| | |||||| || ||||    
T  19868691 ttttggtgggcaggtatgaagaaggatatagccgaatttgtgtatgcttgcctaatttgtcaaaagtcaaaagtagaacatcaaaaaccgtctggattga 19868592  T
Q  137 tgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    ||||||| |||  | | |  |||||||||||||| | |||||| |||||| ||||    
T  19868591 tgcaacccttgagtattctggagtggaagtgggacaacatttcgatggattttgt 19868537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 121
Target Start/End: Complemental strand, 20389063 - 20389013
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||| ||||| |||||| ||||||||||||| || |||||||||||||    
T  20389063 agtttgtatatgcatgtttgatttgtcagaaatctaaagttgaacatcaga 20389013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 20975538 - 20975588
Alignment:
Q  141 accgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    |||||||  |||||| |||||||| ||||||||||||||||||||| ||||    
T  20975538 accgttggatgtgccggagtggaaatgggatagcatttctatggattttgt 20975588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 21166355 - 21166405
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||||| | |||||||||| |||||| |||||| ||||||||||||    
T  21166355 agtttgtgtattcctgtttggtttatcagaagtcgaagattgaacatcaga 21166405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 121
Target Start/End: Complemental strand, 21251905 - 21251855
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||| ||| |||||||| |||||||||| ||||||||||| |||||||    
T  21251905 agtttgtatattcttgtttgatttgtcagaagtcgaaggttgagcatcaga 21251855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 191
Target Start/End: Complemental strand, 22371910 - 22371784
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaa 164  Q
    ||||| ||||||| ||||| ||||||  ||||||||| || ||||||||||||||||  ||  | || ||| ||  ||||||   |||||| ||||||||    
T  22371910 ttgctcagtttgtttatgcatgtttgacttgtcagaagtctaaggttgaacatcagaagcctgcagggttgttgacaccgttagatgtgcctgagtggaa 22371811  T
Q  165 gtgggatagcatttctatggatattgt 191  Q
    |||||| | |||||| |||||| ||||    
T  22371810 gtgggacaacatttccatggattttgt 22371784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 1267132 - 1267087
Alignment:
Q  141 accgttgtttgtgccagagtggaagtgggatagcatttctatggat 186  Q
    |||||||  |||||| |||||||| |||||||||||||||||||||    
T  1267132 accgttggatgtgccggagtggaaatgggatagcatttctatggat 1267087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 803484 - 803540
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||| |||| || ||||| ||||||||||||||||| || |||||||| |||||||    
T  803484 ttgctaagttcgtttatgcctgtttggtttgtcagaagtccaaggttgagcatcaga 803540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 19852296 - 19852260
Alignment:
Q  150 tgtgccagagtggaagtgggatagcatttctatggat 186  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  19852296 tgtgccagagtggaagtgggacagcatttccatggat 19852260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 19858332 - 19858296
Alignment:
Q  150 tgtgccagagtggaagtgggatagcatttctatggat 186  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  19858332 tgtgccagagtggaagtgggacagcatttccatggat 19858296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 151; Significance: 4e-80; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 15292478 - 15292656
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||| |||||||    
T  15292478 atcaagatttgaaaaggttgttttggtggtctggaatgaagaaggagatcgctgagtatgtttatgcttgtttggtttgtcagaaatcgaagattgaaca 15292577  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15292578 tcagagaccatcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggattttgttgga 15292656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 17 - 194
Target Start/End: Complemental strand, 9291787 - 9291610
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||| |||||||    
T  9291787 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggaaattgctgagtttgtttatgcttgtttggtttgtaagaaatcaaagattgaaca 9291688  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgg 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  9291687 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggactttgttgg 9291610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 17 - 194
Target Start/End: Complemental strand, 14998268 - 14998091
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  14998268 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagatcgctgagtttgtttatgcttgtttggtttgtcagaaatcgaagattgaaca 14998169  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgg 194  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||| |||| ||||||  |||||||    
T  14998168 tcagagaccgtcgggttggatgcaaccgttgtttgtgccaaagtggaagtgagatagtatttttatggactttgttgg 14998091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 17 - 194
Target Start/End: Complemental strand, 13248597 - 13248420
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    ||||||||||||| ||||||||||||| || |  |||||||||||| |||  ||||||||| |||||||||||||||||||||||||||||| ||||| |    
T  13248597 atcaagatttgaagaggttgttttggttgcttttaatgaagaaggatatttttgagtttgtttatgcttgtttggtttgtcagaaatcgaagattgaata 13248498  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgg 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||  |||||||    
T  13248497 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggattgtatttctatggactttgttgg 13248420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 12342185 - 12342353
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| ||||| ||||  |||||||||||||||||||| || ||  | ||| | |||||||||||| |||||||||| |||||| |||||||    
T  12342185 atcaggatttgaagaggttattttactggcctggaatgaagaaggatatcgcataatttttttatgcttgtttgatttgtcagaagtcgaagattgaaca 12342284  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggat 186  Q
    |||||   | ||| ||||||||||| |||| |||||||| |||||||||||||||||||| |||||||||    
T  12342285 tcagaagtc-tcgagtttgatgcaatcgttttttgtgccggagtggaagtgggatagcatctctatggat 12342353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 17 - 173
Target Start/End: Complemental strand, 16029063 - 16028907
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcc-tggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaac 115  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||| ||  | |||||| ||||||||||||||||||||||||| |||||  || |||    
T  16029063 atcaggatttgaaaaggttgttttggtggccctggaatgaagaaggatataacagagtttatgtatgcttgtttggtttgtcagaagtcgaaaatttaac 16028964  T
Q  116 atcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatag 173  Q
    ||||||    |||||||||| ||||||| || |||||||| || ||||||| ||||||    
T  16028963 atcagaagttgtcgggtttgttgcaaccatt-tttgtgcctgactggaagtaggatag 16028907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 73 - 173
Target Start/End: Complemental strand, 38811803 - 38811703
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||  |||  ||||||||||| |||| |||||||||| ||||| ||||||||||    
T  38811803 tttgtgtatacttgtttggtttgtcagaaatcgaagattgaacatcagaagccgctgggtttgatgcgaccgctgtttgtgcctgagtgaaagtgggata 38811704  T
Q  173 g 173  Q
    |    
T  38811703 g 38811703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 27901338 - 27901164
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| | ||||||||||||| ||||  |||||| |||  | ||| ||||||||||||| ||||||  ||||||||| || |||||||| ||    
T  27901338 atcatgatttgaagaagttgttttggtggtctggtttgaagagggatgtcgctcagtttgtgtatgcgtgtttgacttgtcagaagtctaaggttgagca 27901239  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    |||||| ||  | || ||| ||  |||||||  ||| || |||||||| ||||| ||||||||||||||| ||||    
T  27901238 tcagaggcctgcagggttgttgacaccgttggatgtaccggagtggaaatgggacagcatttctatggattttgt 27901164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 191
Target Start/End: Complemental strand, 15246828 - 15246702
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaa 164  Q
    ||||| ||||||| ||||| ||||||  ||||||||| || |||||||| |||||||  ||  | || ||| ||  ||||||   |||||| ||||||||    
T  15246828 ttgctcagtttgtctatgcatgtttgacttgtcagaagtctaaggttgagcatcagaagcctgcagggttgttgacaccgttagatgtgccggagtggaa 15246729  T
Q  165 gtgggatagcatttctatggatattgt 191  Q
    |||||||||||||||||||||| ||||    
T  15246728 gtgggatagcatttctatggattttgt 15246702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 191
Target Start/End: Complemental strand, 15078539 - 15078413
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaa 164  Q
    ||||| ||||||| ||||| |||||| |||||||||| || ||||||||||||||||  ||  | || || |||  ||| ||   |||||||||||||||    
T  15078539 ttgctcagtttgtttatgcatgtttgatttgtcagaagtctaaggttgaacatcagaagcctgcagggttaatgacaccattagatgtgccagagtggaa 15078440  T
Q  165 gtgggatagcatttctatggatattgt 191  Q
    |||||| | |||||| |||||| ||||    
T  15078439 gtgggacaacatttccatggattttgt 15078413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 191
Target Start/End: Original strand, 1648602 - 1648771
Alignment:
Q  22 gatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    |||||||| | ||||||||||||| ||||  |||||| |||  | ||  ||||||||||||| ||||||  ||||||||| || |||||||| |||||||    
T  1648602 gatttgaagaagttgttttggtggtctggtttgaagagggatgtcgcacagtttgtgtatgcatgtttgacttgtcagaagtctaaggttgagcatcaga 1648701  T
Q  122 gaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    | ||  | || ||| ||  |||||||  | | |  |||||||| ||||| ||||||||||||||| ||||    
T  1648702 ggcctgcagggttgttgacaccgttggatatactggagtggaaatgggacagcatttctatggattttgt 1648771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 20891886 - 20891765
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaa 164  Q
    ||||| ||||||| |||||||| ||| |||||||||| || |||||||| |||||||  ||  | || ||||||  |||||||  ||| || ||||||||    
T  20891886 ttgctcagtttgtttatgcttgcttgatttgtcagaagtccaaggttgagcatcagaagcctacagggttgatgacaccgttggatgtaccggagtggaa 20891787  T
Q  165 gtgggatagcatttctatggat 186  Q
    |||||| || || |||||||||    
T  20891786 gtgggacagtatctctatggat 20891765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 121
Target Start/End: Complemental strand, 7091328 - 7091280
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||| |||||||| ||| |||||||||||||||||| |||||||    
T  7091328 tttgtgtattcttgtttgatttatcagaaatcgaaggttgagcatcaga 7091280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 14691800 - 14691680
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtggga 170  Q
    |||| |||||| | |||||| ||||||| || || |||||||||||||||| |||  | || ||||||  ||||||   ||| ||||||||||| |||||    
T  14691800 agttggtgtattcctgtttgatttgtcaaaagtcaaaggttgaacatcagaaacctgcagggttgatgacaccgttagatgtaccagagtggaaatggga 14691701  T
Q  171 tagcatttctatggatattgt 191  Q
    |||||| || |||||| ||||    
T  14691700 tagcatatccatggattttgt 14691680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 121
Target Start/End: Complemental strand, 8706816 - 8706766
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||| ||||| |||||| ||||||||||||| || |||||||||||||    
T  8706816 agtttgtatatgcatgtttgatttgtcagaaatctaaagttgaacatcaga 8706766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 15146999 - 15147049
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||||| | | ||||||||||||||| |||||| ||||||||||||    
T  15146999 agtttgtgtattcctatttggtttgtcagaagtcgaagattgaacatcaga 15147049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 121
Target Start/End: Complemental strand, 12524573 - 12524524
Alignment:
Q  72 gtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    |||||||||| | ||||||||||||||||| ||||| ||||| |||||||    
T  12524573 gtttgtgtattcctgtttggtttgtcagaagtcgaaagttgagcatcaga 12524524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 33223827 - 33223771
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||| ||||||||||||| ||||||  ||||||||| || || |||||||||||||    
T  33223827 ttgctcagtttgtgtatgcatgtttgacttgtcagaagtctaaagttgaacatcaga 33223771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 6158 - 5980
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  6158 atcaagatttgaagaggttgttttggtggcctggaatgaagaaggaaattgctgagtttgtttatgcttgtttggtttgtcagaaatcgaagattgaaca 6059  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||    
T  6058 ttagagaccgtcgggtttgatgcaaccgttgtttgttccagagtggaagtgggatagcatttctatggactttgttgga 5980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 22 - 194
Target Start/End: Original strand, 9189 - 9361
Alignment:
Q  22 gatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||    
T  9189 gatttgaagaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtttatgcttgtttggtttgttagaaatcgaagattgaacatcaga 9288  T
Q  122 gaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgg 194  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||    
T  9289 gaccgtcgggtttgatgcaaccgttgtttgtgccagaatggaagtgggatagcatttctatggactttgttgg 9361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 17 - 194
Target Start/End: Complemental strand, 13891 - 13714
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||| |    
T  13891 atcaagatttgaagaggttgttttggtggcctggaatgaagaaggaaattgctgagtttgtttatgcttgtttggtttgtcagaaatcgaagattgaata 13792  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgg 194  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||    
T  13791 acagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagtatttctatggactttgttgg 13714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 139; Significance: 6e-73; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 445 - 267
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  445 atcaagatttgaagaggttgttttggtggcctggaatgaagaatgatattgctgagtttgtttatgcttgtttggtttgtcagaaatcgaagattgaaca 346  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||| ||||||||    
T  345 tcagagaccatcgggtttgatgcaaccgttgtttgttccagagtggatttgggatagcatttctatggattttgttgga 267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 139; Significance: 6e-73; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 19030 - 18852
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  19030 atcaagatttgaagaggttgttttggtggcctggaatgaagaaggaaattgctgagtttgtttatgcttgtttggtttgtcagaaatcgaagattgaaca 18931  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    ||||||||| | | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||    
T  18930 tcagagacctttgtgtttgatgcaaccgttgtttgtgccagagtggaagtgggatagtatttctatggactttgttgga 18852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 139; Significance: 6e-73; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 105896 - 106074
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  105896 atcaggatttgaagaggttcttttggtggcctggaatgaagaaggaaattgctgagtttgtatatgcttgtttggtttgtcagaaatcgaagattgaaca 105995  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||    
T  105996 tcagagactgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggaaagcatttctatggactttgttgga 106074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 49837 - 50011
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||||| | ||||||||||||||||  |||||   ||  ||||| | ||||||||||| ||||||  ||| ||||| || |||||||||||    
T  49837 atcacgatttgaaaaagctgttttggtggcctggtttgaagcgtgatgttgctcaatttgtgtatgcatgtttgacttgccagaagtctaaggttgaaca 49936  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    |||||  ||  | || ||| ||  ||| |||  ||| || |||||||| |||||||| |||||||||||| ||||    
T  49937 tcagaagcctgcagggttgttgacaccattggatgtaccggagtggaaatgggatagtatttctatggattttgt 50011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 138; Significance: 2e-72; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 17 - 194
Target Start/End: Original strand, 3267 - 3444
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |    
T  3267 atcaggatttgaagaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtttatgcttgtttggtttgtcagaaatcgaagattgaaaa 3366  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgg 194  Q
    |||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||    
T  3367 tcagagaccgacgagtttgatgcaaccgttgtttgtgccggagtggaagtgggatagcatttctatggactttgttgg 3444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 138; Significance: 2e-72; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 17 - 194
Target Start/End: Complemental strand, 47137 - 46960
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||| |||||| |||||||    
T  47137 atcaagatttgaagaggttgttttggtggcctggaatgaaggaggaaattgctgagtttgtttatgcttgtttggtttgtcagaagtcgaagattgaaca 47038  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgg 194  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||    
T  47037 tcagagaccgtcgggtttcatgcaaccgttgtttgtgcctgagtggaagtgggatagcatttctatggactttgttgg 46960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 137; Significance: 1e-71; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 55223 - 55391
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||| | ||||||||||||||||||||||||| |||| |||||||    
T  55223 atcaagatttgaagaggttgttttggtggcctggaatgaagatggatattgctgagtttttttatgcttgtttggtttgtcagaaattgaagattgaaca 55322  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatgga 185  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  55323 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagaatggaagtgggatagcatttctatgga 55391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 191
Target Start/End: Original strand, 28749 - 28869
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtggga 170  Q
    ||||||||||| | ||||||||||||||||| |||||| |||||||||||| |||  | ||| |||||  | | ||   ||||||||||||||| |||||    
T  28749 agtttgtgtattcctgtttggtttgtcagaagtcgaagattgaacatcagaaacccgctggtatgatggtatctttagatgtgccagagtggaaatggga 28848  T
Q  171 tagcatttctatggatattgt 191  Q
    ||| || || |||||| ||||    
T  28849 tagtatatccatggattttgt 28869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 137; Significance: 1e-71; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 33 - 185
Target Start/End: Complemental strand, 180891 - 180739
Alignment:
Q  33 gttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggt 132  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  180891 gttgttttggtggccttgaatgaagaaggagattgctgagtttgtttatgcttgtttggtttgtcagaaatcgaagattgaacatcagagaccgtcgggt 180792  T
Q  133 ttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatgga 185  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  180791 ttgatgcaaccgttgtttgtgccagagtggaagtgggataacatttctatgga 180739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 195083 - 195201
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    ||||||||||| ||||||  ||||||||| || ||||||||||||||||  ||  | || ||| ||  |||||||  |||||| |||||||||| |||||    
T  195083 tttgtgtatgcatgtttgacttgtcagaagtctaaggttgaacatcagaagcctacagggttgttgacaccgttggatgtgccggagtggaagttggata 195182  T
Q  173 gcatttctatggatattgt 191  Q
    |||||||||||||| ||||    
T  195183 gcatttctatggattttgt 195201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 134; Significance: 6e-70; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 17 - 194
Target Start/End: Complemental strand, 15639 - 15462
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||| || | ||    
T  15639 atcaggatttgaagaggttgttttggtggcctggaatgaagaaggagattgtttagtttgtttatgcttgtttggtttgtcagaaatcgaagatttatca 15540  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgg 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||    
T  15539 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggataacatttctatggaatttgttgg 15462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 44408 - 44343
Alignment:
Q  130 ggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  44408 ggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggattttgttgga 44343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 133; Significance: 2e-69; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 3525 - 3357
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||| ||||| ||| |||||||    
T  3525 atcaagatttgaagaggttgttttggtggcctggaatgaagaaggagattggtgagtttgtttatgcttgtttgctttgtcaaaaatcaaagattgaaca 3426  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatgga 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  3425 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggataatatttctatgga 3357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 14060 - 14238
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||  |||||||| |||||||||||||||||| ||||||| ||| |||||||    
T  14060 atcaagatttgaagaggttgttttggtggcctggaatgaagaaggaaattgaagagtttgtttatgcttgtttggtttgttagaaatcaaagattgaaca 14159  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||  ||||||||    
T  14160 tcagagaccgtcgggtttgatgcaaacgttgtttgtgccagagtggaagtgggatagtatttctatggactttgttgga 14238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 632 - 454
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||| ||||| | ||| |||||||||||||||||||| || |||||| |||||||    
T  632 atcaggatttgaagaggttgttttggtggcctggaatgaagaaggagatcgctgaatatgtctatgcttgtttggtttgtcaaaagtcgaagattgaaca 533  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  532 tcagagaccgtcgagtttgatgcaaccgttgtttgtgccagagtggaagtgggatagtatttctatggattttgttgga 454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 127; Significance: 9e-66; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 10277 - 10099
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||| || || ||||| |||||||||||||||||||||||||||||| |||||||    
T  10277 atcaggatttgaagaggttgttttggtggcctggaatgaagaaggagatcgcagaatttgtttatgcttgtttggtttgtcagaaatcgaagattgaaca 10178  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||| ||||||||    
T  10177 tcagaaaccgtagggtttgatgcaaccgttgtttgtgccagtgtggaagtgggatagtatctctatggattttgttgga 10099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 127; Significance: 9e-66; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 72172 - 71994
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| || || ||||| |||||||||||||||||| |||| |||||| |||||||    
T  72172 atcaagatttgaagaggttgttttggtggcctggaatgaagaaggagatcgcagaatttgtatatgcttgtttggtttgttagaagtcgaagattgaaca 72073  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||  ||||||||    
T  72072 tcagaaaccgtcgggtttgatgcaaccgttgtttgtgctagagtggaagtgggatagcatttatatggactttgttgga 71994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 24945 - 24772
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| ||||||||| |||| ||||||||||||||||| |||| ||||||||| |||||||| ||||||||||| || |||||| |||||||    
T  24945 atcaggatttgaagaggttgttt-ggtgacctggaatgaagaaggaaattgatgagtttgtatatgcttgattggtttgtcaaaagtcgaagattgaaca 24847  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||| ||||    
T  24846 tcagaaaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagtatctctatcgattttgt 24772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 32736 - 32914
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| ||||||||||||||||| ||||||| |||||| || || || || || |||| |||||||||||||||||| |||||| |||||||    
T  32736 atcaggatttgaagaggttgttttggtggccaggaatgatgaaggaaatcgcagaattcgtttatggttgtttggtttgtcagaagtcgaagattgaaca 32835  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    ||||| |||||| ||||||||| |||| |||||||| ||||||||||||||||||||| ||||||||||  ||||||||    
T  32836 tcagaaaccgtcaggtttgatgtaaccattgtttgttccagagtggaagtgggatagcctttctatggactttgttgga 32914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 124; Significance: 6e-64; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 7131 - 7310
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||| ||||||||||||||||||||| |||||||    
T  7131 atcaggatttgaaaaggttgttttggtggcctggaatgaagaaggagatcgctgagtttgtttatgtttgcttggtttgtcagaaatcgaagattgaaca 7230  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtggg-atagcatttctatggatattgttgga 195  Q
    ||| ||||| |||||||||||||||||||||||||||||| ||||||| |||| |||||||||| |||||| ||||||||    
T  7231 tcaaagaccatcgggtttgatgcaaccgttgtttgtgccaaagtggaaatgggtatagcatttccatggattttgttgga 7310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 13125 - 13007
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    ||||||||||| ||||||  ||||| ||| || ||||||||||||||||  ||  | || ||| ||  |||||||  |||||| ||||||||||||||||    
T  13125 tttgtgtatgcatgtttgacttgtctgaagtctaaggttgaacatcagaagcctgcagggttgttgacaccgttggatgtgccggagtggaagtgggata 13026  T
Q  173 gcatttctatggatattgt 191  Q
    |||||||||||||| ||||    
T  13025 gcatttctatggattttgt 13007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 122; Significance: 9e-63; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 22 - 191
Target Start/End: Original strand, 382 - 551
Alignment:
Q  22 gatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| | ||||||||| ||||||||||||    
T  382 gatttgaagaggttgttttggtggcctggaatgaagaaggaaattgctgagtttgtatatgcttgtttggtttgtaaaaaatcgaagattgaacatcaga 481  T
Q  122 gaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
     ||||||||||||||||||||| ||||||||||||||||| ||||||||||| || ||||||||| ||||    
T  482 aaccgtcgggtttgatgcaacccttgtttgtgccagagtgaaagtgggatagtatctctatggattttgt 551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 122; Significance: 9e-63; HSPs: 3)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 17 - 194
Target Start/End: Complemental strand, 26789 - 26612
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| |||||||||| ||||||||||| |||||||    
T  26789 atcatgatttgaagaggttgttttggtggcctggaatgaagaaggagatcgctgattttgtttatgcttatttggtttgtaagaaatcgaagattgaaca 26690  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgg 194  Q
    ||||||||  |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||  |||||||    
T  26689 tcagagactatcgggtttgatgcaaccgttgtttgtgccagaatggaagtgggataacatttctatggactttgttgg 26612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 191
Target Start/End: Original strand, 10839 - 10954
Alignment:
Q  76 gtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagca 175  Q
    |||||||| ||||||  |||||| || || ||||||||||||||||| ||  | || ||| ||  |||||||  |||||| |||||||||||||||||||    
T  10839 gtgtatgcatgtttgacttgtcaaaagtctaaggttgaacatcagaggcctgcagggttgttgacaccgttggatgtgccggagtggaagtgggatagca 10938  T
Q  176 tttctatggatattgt 191  Q
    ||||||||||| ||||    
T  10939 tttctatggattttgt 10954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 191
Target Start/End: Original strand, 21053 - 21168
Alignment:
Q  76 gtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagca 175  Q
    |||||||| ||||||  |||||| || || ||||||||||||||||| ||  | || ||| ||  |||||||  |||||| |||||||||||||||||||    
T  21053 gtgtatgcatgtttgacttgtcaaaagtctaaggttgaacatcagaggcctgcagggttgttgacaccgttggatgtgccggagtggaagtgggatagca 21152  T
Q  176 tttctatggatattgt 191  Q
    ||||||||||| ||||    
T  21153 tttctatggattttgt 21168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 121; Significance: 3e-62; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 24863 - 24695
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  24863 atcaggatttgaagaggttgttttggtggcctggaatgaagaagtaaattgctgagtttgtgtatgcttgtttggtttgtcagaagtcgaagattgaaca 24764  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatgga 185  Q
    ||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||  || ||||||||    
T  24763 tcagaaaccgtcgggtttgatgcaatcgttgtttgtaccagagtggaagtgggataatatctctatgga 24695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 33 - 185
Target Start/End: Complemental strand, 232522 - 232370
Alignment:
Q  33 gttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggt 132  Q
    |||||||||||||||| ||||||| ||||| |  || ||||||||||||||||||||||||||| |||| || ||| |||||||||| |   ||||| ||    
T  232522 gttgttttggtggcctagaatgaataaggatagagcagagtttgtgtatgcttgtttggtttgttagaagtcaaagattgaacatcaaaagtcgtcgagt 232423  T
Q  133 ttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatgga 185  Q
    ||||||||||| ||||||||| | ||||||||||||||||| || ||||||||    
T  232422 ttgatgcaaccattgtttgtgtcggagtggaagtgggatagtatctctatgga 232370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 17 - 192
Target Start/End: Complemental strand, 4141 - 3966
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| || |||||||| |||||||||||||||||||| |||||||||||||| ||||||||| ||||||||| ||| |||||| |||||||    
T  4141 atcatgatttgaagagattgttttgatggcctggaatgaagaaggaaattgctgagtttgtatatgcttgtctggtttgtccgaagtcgaagattgaaca 4042  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgtt 192  Q
    ||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  4041 tcagaaaccgtcaggtttgatgcaaccgttgttcgtgccagagtggaagtgggatagcatttctatggattttgtt 3966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 119; Significance: 5e-61; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 9969 - 9791
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  9969 atcaggatttgaagaggttgttttggtggcctggaatgaagaaggaaattgctgagtttgtttatgcttgtttggtttgttagaaatcgaagattgaaca 9870  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    | | | ||||||||||||||||||||| ||||||||||||||||||||||| ||||  || ||||||||| ||||||||    
T  9869 taaaaaaccgtcgggtttgatgcaaccattgtttgtgccagagtggaagtgagataatatctctatggattttgttgga 9791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 17 - 194
Target Start/End: Original strand, 747 - 924
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| |||||||||||||||||| ||||||||||||| |||| ||| ||||| ||||||||||||||||||||||| ||||||  ||||||    
T  747 atcaggatttgaagaggttgttttggtggcctagaatgaagaaggaaattgatgactttgtttatgcttgtttggtttgtcagaagtcgaagaatgaaca 846  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgg 194  Q
    ||||| |||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  847 tcagaaaccgtcgggtttgatgcaattgttgtttgtaccagagtggaagtgggatagcatttctatggattttgttgg 924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 112; Significance: 8e-57; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 17 - 172
Target Start/End: Complemental strand, 8152 - 7997
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||| || |||||| |||||||    
T  8152 atcaggatttgaagaggttgttttggtggcctggaatgaagaaggagattgcggaatttgtttatgcttgtttggtttgtcataagtcgaagattgaaca 8053  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    ||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  8052 tcatagaccgtcaggtttgatgcaatcgttgtttgtgccagagtggaagtgggata 7997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 8213 - 8391
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| |||||||||||||||||| |||||||||||||  ||||||||||||| ||||||||||||||| ||||||| || ||| |||||||    
T  8213 atcaggatttgaagaggttgttttggtggcctagaatgaagaaggaatttgctgagtttgtttatgcttgtttggttcgtcagaagtcaaagattgaaca 8312  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    | ||| |||| |||||||||| |||||||||||||||| ||||||||||| ||| ||||||||||||||  ||||||||    
T  8313 ttagaaaccgccgggtttgatacaaccgttgtttgtgctagagtggaagttggacagcatttctatggactttgttgga 8391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 8248 - 8070
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| ||| ||||||||||||||||||||||||||||||| || || ||||| ||||||||||| |||||||| ||||||||| || || |    
T  8248 atcaggatttgaagaggctgttttggtggcctggaatgaagaaggagatcgcagaatttgtttatgcttgttttgtttgtcaaaaatcgaagattaaata 8149  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    ||||| |||||  ||||||||||||||||||||||||||| |||||||||||||||| || ||||| ||| ||||||||    
T  8148 tcagaaaccgttaggtttgatgcaaccgttgtttgtgccaaagtggaagtgggatagtatctctatagattttgttgga 8070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 45418 - 45312
Alignment:
Q  79 tatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcattt 178  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45418 tatgcttgtttggtttgtcagaaatcgaagatttaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcattt 45319  T
Q  179 ctatgga 185  Q
    |||||||    
T  45318 ctatgga 45312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 17 - 194
Target Start/End: Complemental strand, 470 - 296
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| ||||| || ||||||||||||||||||||||||||| |||   |||| |||||||| ||||||||||||||||||  ||| |||||| |||||||    
T  470 atcaggatttaaagaggttgttttggtggcctggaatgaaggagg---ttgcagagtttgtttatgcttgtttggtttgttggaagtcgaagattgaaca 374  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgg 194  Q
    ||||| |||||||||||||||||||||||||||||||| |||  |||||||||||| ||| ||||||||| |||||||    
T  373 tcagaaaccgtcgggtttgatgcaaccgttgtttgtgctagaacggaagtgggataacatatctatggattttgttgg 296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 75541 - 75406
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| || ||||||||||||||||||||||||||||| ||  |  ||||||| |||||||||||| ||||||| || || ||| |||||||    
T  75541 atcatgatttgaagagattgttttggtggcctggaatgaagaaggatataacgaagtttgtatatgcttgtttgctttgtcaaaagtctaagattgaaca 75442  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgt 152  Q
    |||||  || ||||||| ||||||||||||||||||    
T  75441 tcagaagccatcgggttggatgcaaccgttgtttgt 75406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 20049 - 19929
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtggga 170  Q
    ||||||||||||| ||||||  ||||||||| || ||||||||||||||||  ||  | || ||| ||  |||||||  ||| || ||||||||||||||    
T  20049 agtttgtgtatgcatgtttgacttgtcagaagtcaaaggttgaacatcagaagcctgcagggttgttgacaccgttggatgtaccggagtggaagtggga 19950  T
Q  171 tagcatttctatggatattgt 191  Q
    |||||||||||||||| ||||    
T  19949 tagcatttctatggattttgt 19929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 17 - 172
Target Start/End: Original strand, 9390 - 9545
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| ||||||||||  |||| ||||||||||||||| || |   |||||||||||||||||||||||||||| || |||||| |||| ||    
T  9390 atcaggatttgaagaggttgttttaatggcatggaatgaagaaggatatagaaaagtttgtgtatgcttgtttggtttgtcaaaagtcgaagattgagca 9489  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
     ||||  |||||   ||||||| ||| ||||||||| || |||| |||||| ||||    
T  9490 gcagaagccgtcatatttgatgtaactgttgtttgtacctgagtagaagtgagata 9545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 110 - 195
Target Start/End: Complemental strand, 15028 - 14943
Alignment:
Q  110 ttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    |||||||||||| |||||| |||||||||||||| |||||||||||| ||||||||||||||   || ||||||||| ||||||||    
T  15028 ttgaacatcagaaaccgtcaggtttgatgcaaccattgtttgtgccaaagtggaagtgggatcatatctctatggattttgttgga 14943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 11436 - 11554
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    ||||||||||| ||||||  |||||| || || ||||||||||||||||  ||  | || ||| ||  |||||||  |||||| ||||||||||||||||    
T  11436 tttgtgtatgcatgtttgacttgtcaaaagtctaaggttgaacatcagaagcctgcagggttgttgacaccgttggatgtgccggagtggaagtgggata 11535  T
Q  173 gcatttctatggatattgt 191  Q
    |||||||||||||| ||||    
T  11536 gcatttctatggattttgt 11554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 15206 - 15324
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    ||||||||||| ||||||  |||||| || || ||||||||||||||||  ||  | || ||| ||  |||||||  |||||| ||||||||||||||||    
T  15206 tttgtgtatgcatgtttgacttgtcaaaagtctaaggttgaacatcagaagcctgcagggttgttgacaccgttggatgtgccggagtggaagtgggata 15305  T
Q  173 gcatttctatggatattgt 191  Q
    |||||||||||||| ||||    
T  15306 gcatttctatggattttgt 15324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 20918 - 20797
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaa 164  Q
    ||||| |||| |||||||| |||| |  ||||||||| || |||||||| |||||||  ||  | || ||||||  |||||||  |||||| ||||||||    
T  20918 ttgctcagttggtgtatgcgtgttagacttgtcagaagtctaaggttgagcatcagaagcctacagggttgatgacaccgttggatgtgccggagtggaa 20819  T
Q  165 gtgggatagcatttctatggat 186  Q
    |||||| | |||||||||||||    
T  20818 gtgggacaacatttctatggat 20797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 4332 - 4450
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    ||||||||||| ||||||  ||||||||| || |||||||||||||| |  ||  | || ||| ||  |||||||  |||||| ||||||||||||||||    
T  4332 tttgtgtatgcgtgtttgacttgtcagaagtctaaggttgaacatcaaaagcctgcagggttgttgacaccgttggatgtgccggagtggaagtgggata 4431  T
Q  173 gcatttctatggatattgt 191  Q
    |||||||||||||| ||||    
T  4432 gcatttctatggattttgt 4450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 68353 - 68248
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| | |||||||| |||| ||||  |||||| |||  | ||| ||||||||||||| ||||||  ||||||||| || |||||||| ||    
T  68353 atcatgatttgaagaagttgtttttgtggtctggtttgaagagggatgtcgctcagtttgtgtatgcgtgtttgacttgtcagaagtctaaggttgagca 68254  T
Q  117 tcagag 122  Q
    ||||||    
T  68253 tcagag 68248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 73 - 186
Target Start/End: Complemental strand, 41844 - 41731
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    ||||||||||| ||||||  ||||||||| || ||||||||||||||||  ||  | || ||| ||  |||||||  | |||| ||||||||||||||||    
T  41844 tttgtgtatgcatgtttgacttgtcagaagtctaaggttgaacatcagaagcctgcagggttgttgacaccgttggatatgccggagtggaagtgggata 41745  T
Q  173 gcatttctatggat 186  Q
    ||||||||||||||    
T  41744 gcatttctatggat 41731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 23143 - 23082
Alignment:
Q  33 gttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggttt 94  Q
    |||||||| ||||||||||||||||||||| ||||| |||||| | ||||||||||||||||    
T  23143 gttgttttagtggcctggaatgaagaaggaaattgcagagtttatttatgcttgtttggttt 23082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 6952 - 6910
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttga 113  Q
    ||||||||||| |||||||| ||||||||||||||||||||||    
T  6952 agtttgtgtatacttgtttgatttgtcagaaatcgaaggttga 6910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 903 - 1021
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    ||||||||||| ||||||  ||||||||| || ||||||||||||||||  ||  | || ||| ||  |||||||  |||||| ||||||||||||||      
T  903 tttgtgtatgcatgtttgacttgtcagaagtctaaggttgaacatcagaagcctgcagggttgttgacaccgttggatgtgccggagtggaagtgggacc 1002  T
Q  173 gcatttctatggatattgt 191  Q
      |||||||||||| ||||    
T  1003 taatttctatggattttgt 1021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 186
Target Start/End: Original strand, 95341 - 95494
Alignment:
Q  33 gttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggt 132  Q
    ||||||||||||| ||||  ||||||||||  | |||  |||||||||||| ||||||  ||| ||||| || || |||||||||||||| ||  | |||    
T  95341 gttgttttggtggtctggtttgaagaaggatgtcgctcggtttgtgtatgcatgtttgacttgccagaagtctaaagttgaacatcagaggcccgcaggt 95440  T
Q  133 ttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggat 186  Q
    ||| ||  |||||||  ||| || |||||||| |||||||| ||||||||||||    
T  95441 ttgttgacaccgttggatgtaccggagtggaaatgggatagtatttctatggat 95494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 14968 - 14848
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtggga 170  Q
    |||||||||||||||||||| ||||| |||| ||||||||||| ||||||| |||  | ||| |||||  | ||||   ||||||||||||||| |||||    
T  14968 agtttgtgtatgcttgtttgatttgttagaagtcgaaggttgagcatcagaaacctgctggtatgatggtatcgttagatgtgccagagtggaaatggga 14869  T
Q  171 tagcatttctatggatattgt 191  Q
    ||| || || |||||| ||||    
T  14868 tagtatatccatggattttgt 14848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 29880 - 29824
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    |||| |||||||||||| |||||||| |||||||||||||||||||||| |||||||    
T  29880 ttgcagagtttgtgtattcttgtttgatttgtcagaaatcgaaggttgaccatcaga 29824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1710 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold1710
Description:

Target: scaffold1710; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 791 - 673
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    ||||||||||| ||||||  ||||||||| || ||||||||||||||||  ||  | || ||| ||  |||||||  ||||||  |||||||||||||||    
T  791 tttgtgtatgcatgtttgacttgtcagaagtctaaggttgaacatcagaagcctgcagggttgttgtcaccgttggatgtgccgaagtggaagtgggata 692  T
Q  173 gcatttctatggatattgt 191  Q
     ||||||||||||| ||||    
T  691 acatttctatggattttgt 673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0682 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0682
Description:

Target: scaffold0682; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 866 - 692
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| | ||||||||||||| ||||  ||||||||||  | ||| ||||||||||||| ||||||  ||||||||| |  |||||||| ||    
T  866 atcatgatttgaagaagttgttttggtggtctggtttgaagaaggatgtcgctcagtttgtgtatgcgtgtttgacttgtcagaagtataaggttgagca 767  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    |||||| ||  | || ||| ||   ||||||  ||| || |||||||| ||||| | ||||||||||||| ||||    
T  766 tcagaggcctgcaggattgttgacgccgttggatgtaccggagtggaaatgggacaacatttctatggattttgt 692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 6617 - 6735
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    ||||||||||| ||||||  ||||||||| || ||||||||||||||||  ||  | || ||| ||  |||| ||  ||| || ||||||||||||||||    
T  6617 tttgtgtatgcatgtttgacttgtcagaagtctaaggttgaacatcagaagcctgcagggttgttgacaccgctggatgtaccggagtggaagtgggata 6716  T
Q  173 gcatttctatggatattgt 191  Q
    |||||||||||||| ||||    
T  6717 gcatttctatggattttgt 6735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 7987 - 7869
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    ||||||||||| ||||||  || |||||| || ||||||||||||||||  ||  | || ||| ||  |||||||  |||||| ||||||||||||||||    
T  7987 tttgtgtatgcatgtttgacttatcagaagtctaaggttgaacatcagaagcctgcagggttgttgacaccgttggatgtgccggagtggaagtgggata 7888  T
Q  173 gcatttctatggatattgt 191  Q
    |||||||| ||||| ||||    
T  7887 gcatttctctggattttgt 7869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 13678 - 13796
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    ||||||||||| ||||||  ||| ||||| || ||||||||||||||||  ||  |  | ||| ||  |||||||  ||| |||||||||||||||||||    
T  13678 tttgtgtatgcatgtttgacttgccagaagtctaaggttgaacatcagaagcctgcaaggttgttgacaccgttggatgtaccagagtggaagtgggata 13777  T
Q  173 gcatttctatggatattgt 191  Q
    |||||||||||||| ||||    
T  13778 gcatttctatggattttgt 13796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 28152 - 28034
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    ||||||||||| ||||||  ||||||||| || |||||||| |||||||  ||  |  | ||| ||  |||||||  |||||| ||||||||||||||||    
T  28152 tttgtgtatgcatgtttgacttgtcagaagtctaaggttgagcatcagaagcctgcacggttgttgacaccgttggatgtgccggagtggaagtgggata 28053  T
Q  173 gcatttctatggatattgt 191  Q
    |||||||||||||| ||||    
T  28052 gcatttctatggattttgt 28034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 191
Target Start/End: Original strand, 100923 - 101049
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaa 164  Q
    ||||| ||||||||||||| |||||| |||||||||| || ||||||||||||||||  ||  | || ||| ||  |||||||  ||| || ||||||||    
T  100923 ttgctcagtttgtgtatgcgtgtttgatttgtcagaagtctaaggttgaacatcagaagcctgcagggttgttgacaccgttggatgtaccggagtggaa 101022  T
Q  165 gtgggatagcatttctatggatattgt 191  Q
    |||||| |  |||||||||||| ||||    
T  101023 gtgggacaatatttctatggattttgt 101049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 181128 - 181008
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtggga 170  Q
    ||||||||||| | ||||||||||||||||| |||||| | |||||||||| |||  | ||| |||||  | | ||   ||||||||||||||| |||||    
T  181128 agtttgtgtattcctgtttggtttgtcagaagtcgaagatcgaacatcagaaacctgctggtatgatggtatctttagatgtgccagagtggaaatggga 181029  T
Q  171 tagcatttctatggatattgt 191  Q
    ||| || || |||||| ||||    
T  181028 tagtatatccatggattttgt 181008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 46778 - 46896
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    ||||||||||| ||||||  ||||||||| || ||||||||||||||||  ||    || ||| ||  |||||||  |||||| ||||||||||||||||    
T  46778 tttgtgtatgcatgtttgacttgtcagaagtctaaggttgaacatcagaagcctgaagggttgttgacaccgttggatgtgccggagtggaagtgggata 46877  T
Q  173 gcatttctatggatattgt 191  Q
     ||||||||||||| ||||    
T  46878 acatttctatggattttgt 46896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 39389 - 39438
Alignment:
Q  72 gtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    |||||||||| |||||||| |||||||||||||||||||||| |||||||    
T  39389 gtttgtgtattcttgtttgatttgtcagaaatcgaaggttgagcatcaga 39438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 6943 - 6823
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtggga 170  Q
    ||||||||||| |||||||| ||||||| || ||||||||||||||||||| |||  | ||| |||||  | | ||   ||||||||||||||| |||||    
T  6943 agtttgtgtattcttgtttgatttgtcataagtcgaaggttgaacatcagaaacctgctggtatgatggtatctttagatgtgccagagtggaaatggga 6844  T
Q  171 tagcatttctatggatattgt 191  Q
    ||| || || |||||| ||||    
T  6843 tagtatatccatggattttgt 6823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 191
Target Start/End: Original strand, 575 - 731
Alignment:
Q  35 tgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggttt 134  Q
    |||||| |||| ||||  ||||||||||  | |||  |||||||||||| ||||||  || || ||| || ||||||||||||||||| ||  | |||||    
T  575 tgttttagtggtctggtttgaagaaggatgtcgctcggtttgtgtatgcgtgtttgacttatcggaagtctaaggttgaacatcagaggcctgcaggttt 674  T
Q  135 gatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    | ||  |||||||   || ||||||||||| ||||||| ||||||||||||| ||||    
T  675 gttgacaccgttggaagtaccagagtggaaatgggataacatttctatggattttgt 731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 679 - 575
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||| | ||||||||||||| ||||| ||||  | ||  ||||  | ||||||||| |||||||| |||||||||| ||||||||||| ||    
T  679 atcatgatttgaagaagttgttttggtggtctggattgaaacacgatgttgcacaatttgtgtattcttgtttgatttgtcagaagtcgaaggttgagca 580  T
Q  117 tcaga 121  Q
    |||||    
T  579 tcaga 575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1646 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1646
Description:

Target: scaffold1646; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 191
Target Start/End: Complemental strand, 259 - 133
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcag-agaccgtcgggtttgatgcaaccgttgtttgtgccagagtgga 163  Q
    ||||| ||||||||||||| ||||||  ||||||||| || || |||||||||||| || | || ||| ||| ||  |||||||  ||| || |||||||    
T  259 ttgctcagtttgtgtatgcatgtttgacttgtcagaagtctaaagttgaacatcagaagcctgtaggg-ttgttgacaccgttggatgtaccggagtgga 161  T
Q  164 agtgggatagcatttctatggatattgt 191  Q
    | ||||||||||||||||||||| ||||    
T  160 aatgggatagcatttctatggattttgt 133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 191
Target Start/End: Original strand, 25236 - 25362
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcag-agaccgtcgggtttgatgcaaccgttgtttgtgccagagtgga 163  Q
    ||||| ||||||||||||| ||||||  ||||||||| || ||||||||||||||| || | |  ||||||  ||  |||||||  |||||| |||||||    
T  25236 ttgctcagtttgtgtatgcgtgtttgacttgtcagaagtctaaggttgaacatcagaagtctgcagggttt-ttgacaccgttggatgtgccggagtgga 25334  T
Q  164 agtgggatagcatttctatggatattgt 191  Q
    ||||||| | ||||||||||||| ||||    
T  25335 agtgggaaaacatttctatggattttgt 25362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0894 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0894
Description:

Target: scaffold0894; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 71 - 121
Target Start/End: Complemental strand, 3303 - 3253
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||||| |||||||| |||||||||||| ||||||||| |||||||    
T  3303 agtttgtgtattcttgtttgatttgtcagaaattgaaggttgagcatcaga 3253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 7708 - 7758
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||||| |||||||| ||||| |||| |||||||||||||||||||    
T  7708 agtttgtgtattcttgtttgatttgttagaagtcgaaggttgaacatcaga 7758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 9953 - 9779
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||||| ||||||||||||| ||||| ||||    ||  | ||  ||||||||||| |||||||| |||||||||| || |||||||| ||    
T  9953 atcatgatttgaaaaagttgttttggtggtctggactgaaacgtgatgtggcatagtttgtgtattcttgtttgatttgtcagaagtcaaaggttgagca 9854  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    ||| | |||  | || ||||||  ||||||   ||||||||||||||| | |||||| || || |||||| ||||    
T  9853 tcaaaaacctgcagggttgatgacaccgttagatgtgccagagtggaaataggatagtatatccatggattttgt 9779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 7299 - 7181
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    ||||||||| |||||||| |||||||||| ||||||||||| ||||| | |||  | ||| |||||  | ||||   ||||||||||||||| |||||||    
T  7299 tttgtgtattcttgtttgatttgtcagaagtcgaaggttgagcatcaaaaacctgctggtatgatggtatcgttagatgtgccagagtggaaatgggata 7200  T
Q  173 gcatttctatggatattgt 191  Q
    | || || |||||| ||||    
T  7199 gtatatccatggattttgt 7181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 24449 - 24499
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||| |||||||||||| ||||||||||||| || |||||||||||||    
T  24449 agtttgtatatgcttgtttgatttgtcagaaatctaaagttgaacatcaga 24499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 191
Target Start/End: Complemental strand, 27459 - 27333
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaa 164  Q
    ||||| ||||||| ||||| ||||||  ||||||||| || |||||||| |||||||  ||  | || ||| ||  || |||   |||||||||||||||    
T  27459 ttgctcagtttgtttatgcatgtttgacttgtcagaagtctaaggttgagcatcagaagcctgcagggttgttgacactgttagatgtgccagagtggaa 27360  T
Q  165 gtgggatagcatttctatggatattgt 191  Q
    ||||||||||||||| |||||| ||||    
T  27359 gtgggatagcatttccatggattttgt 27333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 71 - 121
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||||| ||| |||| |||||||||||||||||||||| |||||||    
T  71 agtttgtgtattcttatttgatttgtcagaaatcgaaggttgagcatcaga 121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 191
Target Start/End: Original strand, 520 - 646
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaa 164  Q
    ||||| ||||||| ||||| ||||||  ||||||||| || |||||||| |||||||  ||  | || ||| ||  ||||||   |||||||||||| ||    
T  520 ttgctcagtttgtttatgcatgtttgacttgtcagaagtctaaggttgagcatcagaagcctgcagggttgttgacaccgttagatgtgccagagtgaaa 619  T
Q  165 gtgggatagcatttctatggatattgt 191  Q
    ||||||||||||||| |||||| ||||    
T  620 gtgggatagcatttccatggattttgt 646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 19718 - 19768
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    |||| |||||| |||||||| |||||||||||||||||||||| |||||||    
T  19718 agttcgtgtattcttgtttgatttgtcagaaatcgaaggttgagcatcaga 19768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 35; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 71 - 121
Target Start/End: Complemental strand, 19531 - 19481
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||||| | ||||||||||||||||| |||||| ||||||||||||    
T  19531 agtttgtgtattcctgtttggtttgtcagaagtcgaagattgaacatcaga 19481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 71 - 121
Target Start/End: Complemental strand, 34955 - 34905
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||||| | ||||||||||||||||| |||||| ||||||||||||    
T  34955 agtttgtgtattcctgtttggtttgtcagaagtcgaagattgaacatcaga 34905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 191
Target Start/End: Original strand, 51234 - 51360
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaa 164  Q
    ||||| ||||||| ||||| ||||||  ||||||||| || |||||||| |||||||  ||  | || ||| ||  ||||||   |||||||||||||||    
T  51234 ttgctcagtttgtttatgcatgtttgacttgtcagaagtctaaggttgagcatcagaagcctgcagggttgttgacaccgttagatgtgccagagtggaa 51333  T
Q  165 gtgggatagcatttctatggatattgt 191  Q
    |||||| |||||||| |||||| ||||    
T  51334 gtgggacagcatttccatggattttgt 51360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 39199 - 39317
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    ||||||||| | ||||| ||||||||||| |||||| |||||||||||| |||  | |||||||||  | | ||   ||||||||||||||| |||||||    
T  39199 tttgtgtattcctgtttagtttgtcagaagtcgaagattgaacatcagaaacccgctggtttgatggtatccttagatgtgccagagtggaaatgggata 39298  T
Q  173 gcatttctatggatattgt 191  Q
    | || || |||||| ||||    
T  39299 gtatatccatggattttgt 39317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 196855 - 196905
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||||| ||||||||||||||||||| |||||| |||| |||||||    
T  196855 agtttgtgtattcttgtttggtttgtcagaagtcgaagattgagcatcaga 196905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 35; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 191
Target Start/End: Complemental strand, 261243 - 261117
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaa 164  Q
    ||||| ||||||||||||| ||||||  ||||||||| || || |||||||||||||  ||  | || ||| ||   ||||||  ||| || ||||||||    
T  261243 ttgctcagtttgtgtatgcatgtttgacttgtcagaagtctaaagttgaacatcagaagcctgcagggttgttgacgccgttggatgtaccggagtggaa 261144  T
Q  165 gtgggatagcatttctatggatattgt 191  Q
     ||||||||||||||||||||| ||||    
T  261143 atgggatagcatttctatggattttgt 261117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 121
Target Start/End: Original strand, 278209 - 278257
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||| | ||||||||||||||||| |||||| ||||||||||||    
T  278209 tttgtgtattcatgtttggtttgtcagaagtcgaagattgaacatcaga 278257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 1343 - 1464
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaa 164  Q
    ||||| ||||||| ||||| ||||||  ||||||||| || |||||||| |||||||  ||  | || ||| ||  ||| ||   |||||||||||||||    
T  1343 ttgctcagtttgtttatgcatgtttgacttgtcagaagtctaaggttgagcatcagaagcctgcagggttgttgacaccattagatgtgccagagtggaa 1442  T
Q  165 gtgggatagcatttctatggat 186  Q
    ||||||||||||||| ||||||    
T  1443 gtgggatagcatttccatggat 1464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 32690 - 32811
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaa 164  Q
    ||||| ||||||||||||| ||||||  ||||||||| || || |||||||||||||  ||  | || ||| ||  |||||||  ||| || ||||||||    
T  32690 ttgctcagtttgtgtatgcatgtttgacttgtcagaagtctaaagttgaacatcagaagcctgcagggttgttgacaccgttggatgtaccggagtggaa 32789  T
Q  165 gtgggatagcatttctatggat 186  Q
    |||||| || ||||||||||||    
T  32790 gtgggacagtatttctatggat 32811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 3123 - 3003
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtggga 170  Q
    ||||||||||| | ||||||||||||||||| |||| | |||||||||||| |||  | ||| |||||  | | ||   ||||||||||||||| |||||    
T  3123 agtttgtgtattcctgtttggtttgtcagaagtcgacgattgaacatcagaaacctgctggtatgatggtatctttagatgtgccagagtggaaatggga 3024  T
Q  171 tagcatttctatggatattgt 191  Q
    ||| || || |||||| ||||    
T  3023 tagtatatccatggattttgt 3003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 12423 - 12303
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtggga 170  Q
    |||| |||||| | |||||| ||||||| || || |||||||||||||||| |||  | || ||||||  ||||||   ||| ||||||||||| |||||    
T  12423 agttggtgtattcctgtttgatttgtcaaaagtcaaaggttgaacatcagaaacctgcagggttgatgacaccgttagatgtaccagagtggaaatggga 12324  T
Q  171 tagcatttctatggatattgt 191  Q
    |||||| || |||||| ||||    
T  12323 tagcatatccatggattttgt 12303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 10244 - 10204
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttga 113  Q
    ||||||||| |||||||| ||||||||||||||||||||||    
T  10244 tttgtgtattcttgtttgatttgtcagaaatcgaaggttga 10204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 4960 - 4840
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtggga 170  Q
    ||||||||||| | |||||| |||||||||| || || ||||| ||||||| |||  | |||||||||  ||| || | ||| | ||||||||| |||||    
T  4960 agtttgtgtattcctgtttgatttgtcagaagtcaaaagttgagcatcagaaacctgcaggtttgatgacacctttatatgttctagagtggaaatggga 4861  T
Q  171 tagcatttctatggatattgt 191  Q
    |||||| || |||||| ||||    
T  4860 tagcatatccatggattttgt 4840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 6978 - 6858
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtggga 170  Q
    ||||||||||| |||| ||| |||||||||| ||||||||||| ||||||| |||  | ||| |||||  | ||||   |||||| |||||||| |||||    
T  6978 agtttgtgtattcttgcttgatttgtcagaagtcgaaggttgagcatcagaaacctgctggtatgatggtatcgttagatgtgcctgagtggaaatggga 6879  T
Q  171 tagcatttctatggatattgt 191  Q
    ||| || || |||||| ||||    
T  6878 tagtatatccatggattttgt 6858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 24427 - 24307
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtggga 170  Q
    ||||||||||| | ||||||||||||||||| |||| | |||||||||||| |||  | ||| |||||  | | ||   ||||||||||||||| |||||    
T  24427 agtttgtgtattcctgtttggtttgtcagaagtcgatgattgaacatcagaaacctgctggtatgatggtatctttagatgtgccagagtggaaatggga 24328  T
Q  171 tagcatttctatggatattgt 191  Q
    ||| || || |||||| ||||    
T  24327 tagtatatccatggattttgt 24307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 3364 - 3420
Alignment:
Q  139 caaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgttgga 195  Q
    ||||||||||||||||| |||||||||| |||||| || | ||||||| ||||||||    
T  3364 caaccgttgtttgtgccggagtggaagtaggatagtatatatatggattttgttgga 3420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 191
Target Start/End: Original strand, 28145 - 28265
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtggga 170  Q
    ||||||| ||||| |||||| ||||||||||||| || ||||||||||||| ||   | || ||| ||  ||| ||   ||||||||||||||| |||||    
T  28145 agtttgtatatgcatgtttgatttgtcagaaatctaaagttgaacatcagaaacttgctgggttgttgacaccattagatgtgccagagtggaaatggga 28244  T
Q  171 tagcatttctatggatattgt 191  Q
    |||||| || |||||| ||||    
T  28245 tagcatatccatggattttgt 28265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 191
Target Start/End: Original strand, 40136 - 40256
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtggga 170  Q
    ||||||| ||||| |||||| ||||||||||||| || ||||||||||||| ||   | || ||| ||  ||| ||   ||||||||||||||| |||||    
T  40136 agtttgtatatgcatgtttgatttgtcagaaatctaaagttgaacatcagaaacttgctgggttgttgacaccattagatgtgccagagtggaaatggga 40235  T
Q  171 tagcatttctatggatattgt 191  Q
    |||||| || |||||| ||||    
T  40236 tagcatatccatggattttgt 40256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1061 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold1061
Description:

Target: scaffold1061; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 65 - 191
Target Start/End: Complemental strand, 2523 - 2397
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcag-agaccgtcgggtttgatgcaaccgttgtttgtgccagagtgga 163  Q
    ||||| ||||||||||||| ||||||  ||||||||| || |||||||| |||||| || | || ||||||  ||  ||||||   |||||| |||||||    
T  2523 ttgctcagtttgtgtatgcgtgtttgacttgtcagaagtctaaggttgagcatcagaagcctgttgggttt-ttgacaccgtttgatgtgccggagtgga 2425  T
Q  164 agtgggatagcatttctatggatattgt 191  Q
    ||||||| || |||||||||||| ||||    
T  2424 agtgggacagtatttctatggattttgt 2397  T

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Target: scaffold0035 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 65 - 191
Target Start/End: Complemental strand, 3686 - 3560
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcag-agaccgtcgggtttgatgcaaccgttgtttgtgccagagtgga 163  Q
    ||||| ||||||||||||| ||||||  ||||||||| || |||||||| |||||| |||| | | || ||| ||  |||||||  |||| | || ||||    
T  3686 ttgctcagtttgtgtatgcgtgtttgacttgtcagaagtctaaggttgagcatcagaagactg-cagggttgttgacaccgttggatgtggcggaatgga 3588  T
Q  164 agtgggatagcatttctatggatattgt 191  Q
    ||||||| ||||||||||||||| ||||    
T  3587 agtgggacagcatttctatggattttgt 3560  T

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Target: scaffold2094 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold2094
Description:

Target: scaffold2094; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 439 - 489
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||| ||||| |||||| |||||||||| || ||||||||||||||||    
T  439 agtttgtatatgcatgtttgatttgtcagaagtctaaggttgaacatcaga 489  T

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Target: scaffold1602 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1602
Description:

Target: scaffold1602; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 1444 - 1494
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||||| |||||||| |||||||||| ||||| ||||| |||||||    
T  1444 agtttgtgtattcttgtttgatttgtcagaagtcgaaagttgagcatcaga 1494  T

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Target: scaffold0742 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0742
Description:

Target: scaffold0742; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 6140 - 6022
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggata 172  Q
    ||||||||||| || |||  ||| ||||| || |||||||| |||||||  ||  | |||||| ||  |||||||  ||| || |||||||| |||||||    
T  6140 tttgtgtatgcatgcttgacttgccagaagtctaaggttgagcatcagaagcctgcaggtttgttgacaccgttggatgtaccggagtggaaatgggata 6041  T
Q  173 gcatttctatggatattgt 191  Q
    |||||||||||||| ||||    
T  6040 gcatttctatggattttgt 6022  T

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Target: scaffold0730 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 119
Target Start/End: Original strand, 4971 - 5017
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatca 119  Q
    ||||||||||| |||||  |||||||||| |||||||||||||||||    
T  4971 tttgtgtatgcatgtttaatttgtcagaagtcgaaggttgaacatca 5017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 121
Target Start/End: Complemental strand, 2396 - 2346
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||||| |||||||| ||||||| || ||||||||||| |||||||    
T  2396 agtttgtgtattcttgtttgatttgtcaaaagtcgaaggttgagcatcaga 2346  T

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Target: scaffold0348 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 191
Target Start/End: Complemental strand, 7151 - 6993
Alignment:
Q  33 gttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggt 132  Q
    ||||||||||||| ||||  ||||||||||  | |||  |||||| ||||| ||||||  ||||||||| || |||||||| |||||||| ||  | ||     
T  7151 gttgttttggtggtctggtttgaagaaggatgtcgctcggtttgtatatgcatgtttgacttgtcagaagtctaaggttgagcatcagaggcctgcagga 7052  T
Q  133 ttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
      | ||  ||| |||  ||| || |||||||| ||||||||||||||||||||| ||||    
T  7051 aagttgacaccattggatgtaccggagtggaaatgggatagcatttctatggattttgt 6993  T

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Target: scaffold0333 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 121
Target Start/End: Complemental strand, 16584 - 16534
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||||| |||||||| |||||||||| ||||| ||||| |||||||    
T  16584 agtttgtgtattcttgtttgatttgtcagaagtcgaaagttgagcatcaga 16534  T

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Target: scaffold0101 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 191
Target Start/End: Original strand, 4823 - 4949
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaa 164  Q
    ||||| ||||||||||||| ||||||  ||||||||| || || |||||||||||||  ||  | || ||| ||  |||||||  |||  | ||||||||    
T  4823 ttgctcagtttgtgtatgcatgtttgacttgtcagaagtctaaagttgaacatcagaagcctgcagggttgttgacaccgttggatgtatcggagtggaa 4922  T
Q  165 gtgggatagcatttctatggatattgt 191  Q
     ||||||| ||||||||||||| ||||    
T  4923 atgggataacatttctatggattttgt 4949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 19832 - 19658
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||||| ||||||||||||| | ||  |||||  |||  ||||| | ||||||||||| ||||||  ||| ||||| || ||||| |||||    
T  19832 atcatgatttgaaaaagttgttttggtggtccggtttgaagggggatgttgcttaatttgtgtatgcatgtttgacttgccagaagtctaaggtcgaaca 19733  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    |||||  ||  | || ||| ||  ||| ||   ||||||||| ||||||||||| | ||||||||||||| ||||    
T  19732 tcagaagcctgcagggttgttgacacctttagatgtgccagaatggaagtgggacaacatttctatggattttgt 19658  T

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Target: scaffold0090; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 23994 - 23820
Alignment:
Q  17 atcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagattgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaaca 116  Q
    |||| |||||||||| ||||||||||||| | ||  |||||  |||  ||||| | ||||||||||| ||||||  ||| ||||| || ||||| |||||    
T  23994 atcatgatttgaaaaagttgttttggtggtccggtttgaagggggatgttgcttaatttgtgtatgcatgtttgacttgccagaagtctaaggtcgaaca 23895  T
Q  117 tcagagaccgtcgggtttgatgcaaccgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    |||||  ||  | || ||| ||  ||| ||   ||||||||| ||||||||||| | ||||||||||||| ||||    
T  23894 tcagaagcctgcagggttgttgacacctttagatgtgccagaatggaagtgggacaacatttctatggattttgt 23820  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 323563 - 323513
Alignment:
Q  141 accgttgtttgtgccagagtggaagtgggatagcatttctatggatattgt 191  Q
    |||||||  |||||| |||||||||||||||| ||||||||||||| ||||    
T  323563 accgttggatgtgccggagtggaagtgggataacatttctatggattttgt 323513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 390577 - 390627
Alignment:
Q  71 agtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||||| |||||||| |||||||||| ||||| ||||| |||||||    
T  390577 agtttgtgtattcttgtttgatttgtcagaagtcgaaagttgagcatcaga 390627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 19380 - 19429
Alignment:
Q  72 gtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||||||||||||| |||| ||||| |||||| |||| |||||||    
T  19380 gtttgtgtatgcttgtttgatttgccagaagtcgaagattgagcatcaga 19429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 186
Target Start/End: Original strand, 12245 - 12277
Alignment:
Q  154 ccagagtggaagtgggatagcatttctatggat 186  Q
    ||||||||||| |||||||||||||||||||||    
T  12245 ccagagtggaaatgggatagcatttctatggat 12277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 1057 - 1113
Alignment:
Q  65 ttgctgagtttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||| ||||||||||||| ||||||  ||||||||| || |||||||| |||||||    
T  1057 ttgctcagtttgtgtatgcgtgtttgacttgtcagaagtctaaggttgagcatcaga 1113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 121
Target Start/End: Complemental strand, 27188 - 27140
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||| |||||||||||| |||||||||| || |||||||| |||||||    
T  27188 tttgtttatgcttgtttgatttgtcagaagtccaaggttgagcatcaga 27140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 121
Target Start/End: Complemental strand, 229970 - 229922
Alignment:
Q  73 tttgtgtatgcttgtttggtttgtcagaaatcgaaggttgaacatcaga 121  Q
    ||||||||| ||||||||||||||||||| |||||  |||| |||||||    
T  229970 tttgtgtattcttgtttggtttgtcagaagtcgaaaattgagcatcaga 229922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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