View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8518A_low_408 (Length: 207)
Name: NF8518A_low_408
Description: NF8518A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8518A_low_408 |
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Alignment Details
Target: chr3 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 81 - 187
Target Start/End: Original strand, 47094327 - 47094433
Alignment:
| Q |
81 |
agtaagaagatgatgaacgtgtttgagtggtttgttttgggtgccattgttgaatagaggtgagatgagtgatgagaatgtttgttgttcatttgaaata |
180 |
Q |
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| T |
47094327 |
agtaagaagatgatgaaagtgtttgagtggtttgttttgggtgccattgttgaatagaggtgagatgagtgatgagaatgttttttgttcatttgaaata |
47094426 |
T |
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| Q |
181 |
gttgtta |
187 |
Q |
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||||||| |
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| T |
47094427 |
gttgtta |
47094433 |
T |
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