View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8518A_low_409 (Length: 207)
Name: NF8518A_low_409
Description: NF8518A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8518A_low_409 |
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Alignment Details
Target: chr4 (Bit Score: 129; Significance: 6e-67; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 29 - 184
Target Start/End: Original strand, 49755364 - 49755528
Alignment:
| Q |
29 |
atacaaaaacaaaatgagctctgaactaattcacagaaaccaaacaagagatcaaaccacagattcatcatcccatcgtgataatcctcttccaagaacg |
128 |
Q |
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| T |
49755364 |
atacaaaaacaaaatgagttctgaactaattcacagaaaccaaacaagagatcaaaccacagattcatcatcccatcgtgataatcctcttccaagaacg |
49755463 |
T |
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| Q |
129 |
agaaca---------aacatgcttctaaatcgagtccctttccttctcattggaatagcaatttc |
184 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49755464 |
agaacaaacatcatcaacatgcttctaaatcgagtccctttccttctcattggaatagcaatttc |
49755528 |
T |
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