View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8518A_low_46 (Length: 410)

Name: NF8518A_low_46
Description: NF8518A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8518A_low_46
NF8518A_low_46
[»] chr3 (29 HSPs)
chr3 (21-273)||(28978977-28979232)
chr3 (270-404)||(48519762-48519896)
chr3 (289-404)||(28979732-28979847)
chr3 (270-404)||(29528858-29528992)
chr3 (270-398)||(4137509-4137637)
chr3 (270-394)||(53802174-53802298)
chr3 (270-397)||(26100885-26101012)
chr3 (270-396)||(19360841-19360967)
chr3 (270-404)||(39094352-39094486)
chr3 (270-396)||(35860812-35860937)
chr3 (286-404)||(55290519-55290637)
chr3 (272-404)||(8396566-8396698)
chr3 (273-404)||(52842987-52843117)
chr3 (270-404)||(19893285-19893419)
chr3 (270-404)||(26776543-26776676)
chr3 (270-363)||(40817284-40817377)
chr3 (270-353)||(18688526-18688609)
chr3 (49-253)||(23270721-23270922)
chr3 (270-400)||(22522066-22522203)
chr3 (49-253)||(20142279-20142477)
chr3 (35-107)||(31108191-31108263)
chr3 (360-404)||(55293591-55293635)
chr3 (366-404)||(9373262-9373300)
chr3 (95-150)||(23161955-23162010)
chr3 (358-404)||(9374078-9374123)
chr3 (358-404)||(16062531-16062577)
chr3 (85-119)||(39854532-39854566)
chr3 (360-401)||(26101600-26101641)
chr3 (360-396)||(19361556-19361592)
[»] chr7 (35 HSPs)
chr7 (270-404)||(9151220-9151354)
chr7 (270-397)||(44806386-44806513)
chr7 (270-404)||(27733060-27733194)
chr7 (270-404)||(39648088-39648222)
chr7 (270-398)||(21669338-21669466)
chr7 (270-397)||(35155595-35155722)
chr7 (273-395)||(34873630-34873752)
chr7 (270-404)||(31896920-31897054)
chr7 (273-404)||(4850249-4850380)
chr7 (270-404)||(17172695-17172829)
chr7 (272-396)||(691097-691221)
chr7 (270-404)||(48527518-48527652)
chr7 (270-404)||(49144141-49144275)
chr7 (294-395)||(7855094-7855195)
chr7 (273-404)||(29469019-29469150)
chr7 (270-404)||(24682384-24682518)
chr7 (270-365)||(33636982-33637076)
chr7 (270-398)||(39278057-39278173)
chr7 (270-351)||(21598059-21598140)
chr7 (270-351)||(11835066-11835147)
chr7 (360-404)||(24683950-24683994)
chr7 (360-404)||(33637584-33637628)
chr7 (360-404)||(39648784-39648828)
chr7 (360-404)||(49145089-49145133)
chr7 (360-404)||(4849519-4849563)
chr7 (360-396)||(27733880-27733916)
chr7 (360-396)||(49144961-49144997)
chr7 (360-399)||(7855901-7855940)
chr7 (360-399)||(29468519-29468558)
chr7 (360-399)||(34872884-34872923)
chr7 (358-404)||(32200990-32201036)
chr7 (46-111)||(1440608-1440673)
chr7 (360-404)||(9150711-9150755)
chr7 (360-404)||(17171432-17171476)
chr7 (360-404)||(31897625-31897669)
[»] chr8 (44 HSPs)
chr8 (270-404)||(41158445-41158579)
chr8 (270-396)||(7391127-7391253)
chr8 (270-404)||(44380819-44380953)
chr8 (270-397)||(24055648-24055775)
chr8 (270-397)||(36778288-36778415)
chr8 (270-404)||(25345795-25345929)
chr8 (279-404)||(41531885-41532010)
chr8 (270-393)||(42244442-42244565)
chr8 (270-396)||(4464461-4464587)
chr8 (270-404)||(25361316-25361450)
chr8 (270-400)||(41978664-41978794)
chr8 (270-397)||(9473931-9474058)
chr8 (270-404)||(8762814-8762948)
chr8 (270-404)||(18375664-18375798)
chr8 (270-397)||(40586549-40586675)
chr8 (270-404)||(1944989-1945123)
chr8 (270-404)||(8160526-8160660)
chr8 (270-404)||(25618606-25618740)
chr8 (270-404)||(25834104-25834238)
chr8 (270-404)||(32846997-32847131)
chr8 (35-108)||(11806419-11806492)
chr8 (38-150)||(5072975-5073088)
chr8 (360-404)||(1944257-1944301)
chr8 (360-404)||(4465281-4465325)
chr8 (360-404)||(8161328-8161372)
chr8 (360-404)||(8162071-8162115)
chr8 (360-404)||(8761449-8761493)
chr8 (360-404)||(8762081-8762125)
chr8 (41-121)||(9433568-9433648)
chr8 (360-404)||(12761305-12761349)
chr8 (360-404)||(25834927-25834971)
chr8 (360-404)||(25835559-25835603)
chr8 (360-404)||(32844900-32844944)
chr8 (360-404)||(32845644-32845688)
chr8 (360-404)||(41157717-41157761)
chr8 (360-404)||(1943514-1943558)
chr8 (360-404)||(32846277-32846321)
chr8 (360-399)||(9473305-9473344)
chr8 (353-404)||(34894211-34894262)
chr8 (353-404)||(34894616-34894667)
chr8 (353-404)||(37588310-37588361)
chr8 (361-396)||(44381597-44381632)
chr8 (35-64)||(23125199-23125228)
chr8 (353-397)||(37588478-37588522)
[»] chr4 (52 HSPs)
chr4 (270-396)||(12680741-12680867)
chr4 (270-404)||(17741464-17741598)
chr4 (270-404)||(8532028-8532162)
chr4 (270-404)||(46106223-46106357)
chr4 (270-394)||(2118001-2118125)
chr4 (273-397)||(13172757-13172881)
chr4 (273-397)||(30527697-30527821)
chr4 (270-394)||(47555532-47555656)
chr4 (270-397)||(3759088-3759215)
chr4 (270-397)||(36741906-36742033)
chr4 (270-404)||(43023826-43023962)
chr4 (270-404)||(39404698-39404832)
chr4 (270-404)||(39713602-39713736)
chr4 (270-404)||(8964635-8964769)
chr4 (270-404)||(8989002-8989136)
chr4 (270-404)||(9887377-9887511)
chr4 (270-404)||(37351902-37352036)
chr4 (270-404)||(37356801-37356935)
chr4 (270-404)||(50043138-50043272)
chr4 (270-397)||(50118174-50118301)
chr4 (270-404)||(16652996-16653130)
chr4 (270-404)||(24944238-24944374)
chr4 (270-393)||(24549235-24549358)
chr4 (273-397)||(20590811-20590936)
chr4 (271-404)||(52802735-52802868)
chr4 (270-353)||(5759194-5759277)
chr4 (270-404)||(29713626-29713759)
chr4 (360-404)||(8987637-8987681)
chr4 (360-404)||(8988269-8988313)
chr4 (360-404)||(9888209-9888253)
chr4 (360-404)||(20590134-20590178)
chr4 (360-404)||(24944850-24944894)
chr4 (360-404)||(37350537-37350581)
chr4 (360-404)||(37351169-37351213)
chr4 (360-404)||(46105337-46105381)
chr4 (353-396)||(42349529-42349572)
chr4 (360-399)||(43022580-43022619)
chr4 (360-404)||(2117262-2117306)
chr4 (360-404)||(16904785-16904829)
chr4 (360-404)||(24947566-24947610)
chr4 (360-396)||(29713129-29713165)
chr4 (360-404)||(43023091-43023135)
chr4 (360-399)||(24548490-24548529)
chr4 (358-396)||(26602775-26602813)
chr4 (358-396)||(26603544-26603582)
chr4 (358-396)||(37061526-37061564)
chr4 (358-404)||(42348387-42348433)
chr4 (358-404)||(48808234-48808280)
chr4 (358-404)||(48808351-48808397)
chr4 (360-404)||(39405531-39405575)
chr4 (360-404)||(39714357-39714401)
chr4 (360-404)||(52801430-52801474)
[»] chr1 (39 HSPs)
chr1 (270-404)||(19320527-19320661)
chr1 (270-404)||(47137659-47137793)
chr1 (270-396)||(5428124-5428250)
chr1 (270-404)||(16301943-16302077)
chr1 (270-404)||(50563273-50563407)
chr1 (286-395)||(46623499-46623608)
chr1 (270-404)||(29184584-29184718)
chr1 (270-404)||(33074338-33074472)
chr1 (270-404)||(33363373-33363507)
chr1 (271-404)||(4893769-4893902)
chr1 (270-404)||(24289308-24289442)
chr1 (270-404)||(28572961-28573095)
chr1 (270-404)||(51964570-51964704)
chr1 (273-404)||(1375783-1375914)
chr1 (273-404)||(22194577-22194708)
chr1 (270-397)||(38896623-38896749)
chr1 (270-404)||(1828239-1828373)
chr1 (35-119)||(11199914-11199998)
chr1 (329-404)||(52312024-52312099)
chr1 (270-343)||(49586978-49587051)
chr1 (35-119)||(48273210-48273294)
chr1 (360-404)||(19321236-19321280)
chr1 (360-404)||(28571471-28571515)
chr1 (360-404)||(28572214-28572258)
chr1 (360-404)||(47136930-47136974)
chr1 (360-404)||(5427384-5427428)
chr1 (360-396)||(16301362-16301398)
chr1 (360-404)||(50562470-50562514)
chr1 (360-404)||(52311250-52311294)
chr1 (360-399)||(22198182-22198221)
chr1 (360-399)||(46624303-46624342)
chr1 (358-396)||(8256444-8256482)
chr1 (79-121)||(50391972-50392014)
chr1 (35-108)||(29865543-29865616)
chr1 (355-404)||(35593623-35593672)
chr1 (359-404)||(50278377-50278422)
chr1 (360-404)||(4892506-4892550)
chr1 (360-404)||(29185937-29185981)
chr1 (360-404)||(33362109-33362153)
[»] chr6 (19 HSPs)
chr6 (270-398)||(15043934-15044062)
chr6 (270-404)||(6966344-6966478)
chr6 (270-404)||(4109857-4109991)
chr6 (270-397)||(9735803-9735930)
chr6 (270-404)||(1222185-1222319)
chr6 (270-404)||(18320528-18320662)
chr6 (271-404)||(24447596-24447729)
chr6 (270-394)||(14832863-14832987)
chr6 (289-404)||(9978834-9978949)
chr6 (270-393)||(4896068-4896191)
chr6 (270-404)||(35159922-35160058)
chr6 (270-404)||(33319673-33319807)
chr6 (360-404)||(4109125-4109169)
chr6 (360-404)||(33320362-33320406)
chr6 (360-399)||(4896772-4896811)
chr6 (360-404)||(35159258-35159302)
chr6 (360-404)||(1220926-1220970)
chr6 (358-398)||(19989975-19990015)
chr6 (360-404)||(24446333-24446377)
[»] scaffold0032 (1 HSPs)
scaffold0032 (270-404)||(2951-3085)
[»] chr5 (34 HSPs)
chr5 (270-404)||(42975496-42975630)
chr5 (270-397)||(36884887-36885014)
chr5 (270-404)||(30181212-30181346)
chr5 (270-404)||(33704862-33704996)
chr5 (271-404)||(41692943-41693076)
chr5 (270-397)||(17636792-17636919)
chr5 (271-404)||(34719259-34719392)
chr5 (270-404)||(43136381-43136515)
chr5 (270-394)||(34725367-34725490)
chr5 (270-404)||(752162-752296)
chr5 (270-404)||(25695645-25695778)
chr5 (273-392)||(3086543-3086662)
chr5 (271-404)||(2182654-2182789)
chr5 (36-113)||(34714375-34714452)
chr5 (360-404)||(752999-753043)
chr5 (360-404)||(753742-753786)
chr5 (360-404)||(43137204-43137248)
chr5 (75-121)||(27856160-27856206)
chr5 (360-404)||(2181915-2181959)
chr5 (358-394)||(3890316-3890352)
chr5 (360-404)||(6304736-6304780)
chr5 (360-404)||(12419376-12419420)
chr5 (353-405)||(16679749-16679801)
chr5 (360-404)||(30180495-30180539)
chr5 (360-404)||(43137836-43137880)
chr5 (353-404)||(16679591-16679642)
chr5 (353-404)||(16683476-16683527)
chr5 (360-399)||(42976217-42976256)
chr5 (360-398)||(3087352-3087390)
chr5 (75-121)||(28296108-28296154)
chr5 (358-396)||(38937476-38937514)
chr5 (360-396)||(17637624-17637660)
chr5 (360-404)||(34717996-34718040)
chr5 (360-404)||(41691680-41691724)
[»] scaffold0009 (3 HSPs)
scaffold0009 (270-397)||(139383-139510)
scaffold0009 (270-351)||(233078-233159)
scaffold0009 (360-404)||(232379-232423)
[»] scaffold0484 (2 HSPs)
scaffold0484 (270-404)||(8282-8416)
scaffold0484 (360-396)||(8986-9022)
[»] chr2 (28 HSPs)
chr2 (270-395)||(10874505-10874630)
chr2 (270-397)||(18090718-18090845)
chr2 (270-393)||(42782486-42782609)
chr2 (270-404)||(4289134-4289268)
chr2 (271-393)||(32675851-32675973)
chr2 (286-404)||(9542752-9542870)
chr2 (270-404)||(19488078-19488212)
chr2 (270-393)||(17838286-17838409)
chr2 (270-392)||(6931720-6931841)
chr2 (270-404)||(28609747-28609888)
chr2 (338-404)||(1501514-1501580)
chr2 (270-348)||(1501374-1501448)
chr2 (360-404)||(1513689-1513733)
chr2 (360-404)||(6931200-6931244)
chr2 (360-404)||(9543452-9543496)
chr2 (37-121)||(11615729-11615813)
chr2 (353-404)||(1501622-1501673)
chr2 (360-399)||(32676463-32676502)
chr2 (360-404)||(18091530-18091574)
chr2 (360-404)||(28609016-28609060)
chr2 (353-404)||(8909848-8909899)
chr2 (360-399)||(42781747-42781786)
chr2 (35-121)||(8252670-8252756)
chr2 (358-404)||(25234472-25234518)
chr2 (358-404)||(25234787-25234833)
chr2 (358-404)||(25235107-25235153)
chr2 (360-404)||(4290485-4290529)
chr2 (37-121)||(31022898-31022981)
[»] scaffold0230 (1 HSPs)
scaffold0230 (270-404)||(26133-26267)
[»] scaffold0069 (1 HSPs)
scaffold0069 (270-404)||(14449-14583)
[»] scaffold0051 (1 HSPs)
scaffold0051 (270-404)||(55360-55494)
[»] scaffold0381 (2 HSPs)
scaffold0381 (270-404)||(11033-11167)
scaffold0381 (360-404)||(10291-10335)
[»] scaffold0057 (2 HSPs)
scaffold0057 (273-396)||(17510-17634)
scaffold0057 (360-404)||(18217-18261)
[»] scaffold0759 (1 HSPs)
scaffold0759 (270-356)||(3531-3617)
[»] scaffold0115 (3 HSPs)
scaffold0115 (270-404)||(14813-14947)
scaffold0115 (360-404)||(3812-3856)
scaffold0115 (360-404)||(11552-11596)
[»] scaffold0542 (1 HSPs)
scaffold0542 (42-119)||(8812-8889)
[»] scaffold2127 (1 HSPs)
scaffold2127 (360-404)||(772-816)
[»] scaffold0432 (1 HSPs)
scaffold0432 (358-404)||(5564-5610)


Alignment Details
Target: chr3 (Bit Score: 230; Significance: 1e-127; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 21 - 273
Target Start/End: Original strand, 28978977 - 28979232
Alignment:
Q  21 agtagagaatattctgttgggtttcaagtgtgagtggttaagtctcacactatttatgaatgtgtaaaatattggatatataagagaggtgactcatata 120  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28978977 agtagagaatattttgttgggtttcaagtgtgagtggttaagtctcacactatttatgaatgtgtaaaatattggatatataagagaggtgactcatata 28979076  T
Q  121 cttgaggcgttgtgattttgggtggagatggagcgtcttcatctcttgcgattttgaaacattaacctgttgctgctctcgtggcatatgaacttctcaa 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28979077 cttgaggcgttgtgattttgggtggagatggagcgtcttcatctcttgcgattttgaaacattaacctgttgctgctctcgtggcatatgaacttctcaa 28979176  T
Q  221 caagtggtatcagagtcttggtttggtt---tggtggagcaggagtcggatcatgt 273  Q
    ||| ||||||||||||||||||||||||   ||||||||| |||||||||||||||    
T  28979177 caaatggtatcagagtcttggtttggtttggtggtggagcgggagtcggatcatgt 28979232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 48519762 - 48519896
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  48519762 atgtgaaaatcaaagttgcgtaaaccaaaattttgcaacacagagcctaaagcactacataaaaaataacataacaactattgtaatctcttattcctta 48519861  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| ||||  |||||||||||||| ||||    
T  48519862 aagttaacccgaacataaaattttgccctagattt 48519896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 289 - 404
Target Start/End: Original strand, 28979732 - 28979847
Alignment:
Q  289 gtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttcttaaagttaaccagaacgcaaa 388  Q
    ||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28979732 gtaaaccaaaattttgcaacacagagcttaaagcattacataaaaaataacataacaactattgtaatatcttatttcttaaagttaaccagaacgcaaa 28979831  T
Q  389 attttgccctaaattt 404  Q
    ||||||||||| ||||    
T  28979832 attttgccctagattt 28979847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 29528858 - 29528992
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  29528858 atgtgaaaatcaaagctgcgtaaatcaaaattttgcaacacagagcctaaaacactacataaaaaataacataacaactattataatatcttattcctta 29528957  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| |||||||||||||||||| ||||||    
T  29528958 aagttaacccgaacgcaaaattttgcccaaaattt 29528992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 270 - 398
Target Start/End: Original strand, 4137509 - 4137637
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||  |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  4137509 atgtgaaaatcaaatctgcgtaaaccaaaattttgcaacacagtgcctaaagcactacataaaaaataacataacaactattgtaatatcatattcctta 4137608  T
Q  370 aagttaaccagaacgcaaaattttgccct 398  Q
    ||||||| | |||||||||||||||||||    
T  4137609 aagttaatccgaacgcaaaattttgccct 4137637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 270 - 394
Target Start/End: Complemental strand, 53802298 - 53802174
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||    
T  53802298 atgtgaaaatcaaagttgcgtaaaccaaaattttgcaacacagagcctaaagcactgcataaaaaataacataacaactattttaatatcttattcctta 53802199  T
Q  370 aagttaaccagaacgcaaaattttg 394  Q
    |||||||   |||||||||||||||    
T  53802198 aagttaattcgaacgcaaaattttg 53802174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 270 - 397
Target Start/End: Original strand, 26100885 - 26101012
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| ||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  26100885 atgtgaaaatcaaagttgcgtaaatcaaaattttgcaacacagagcttaaaacactacataaaaaataacataacaactattataatatcttattcctta 26100984  T
Q  370 aagttaaccagaacgcaaaattttgccc 397  Q
    ||||||||| ||||| ||||||||||||    
T  26100985 aagttaacccgaacgtaaaattttgccc 26101012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 270 - 396
Target Start/End: Original strand, 19360841 - 19360967
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    ||||| || |||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| || |||||||||||| ||||    
T  19360841 atgtggaaatcaaagctgcgtaaaccaaaattttgcaacacagagcctaaaacactacataaaaaataacataacaactcttataatatcttattcctta 19360940  T
Q  370 aagttaaccagaacgcaaaattttgcc 396  Q
    ||||||||| |||||||||||||||||    
T  19360941 aagttaacctgaacgcaaaattttgcc 19360967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 39094486 - 39094352
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||| ||| ||||||||||||||||||||||||| ||||||||| | |||| || | |||||||||||||||||||||||||||||||||||||| ||||    
T  39094486 atgtaaaaatcaaagttgcgtaaaccaaaattttacaacacagagcttaaaacattgcataaaaaataacataacaactattgtaatatcttattcctta 39094387  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| |||||||||||||||||||| ||||    
T  39094386 aagttaacccgaacgcaaaattttgccctagattt 39094352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 270 - 396
Target Start/End: Complemental strand, 35860937 - 35860812
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    ||||||||| ||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||| |||     
T  35860937 atgtgaaat-caaagctgcgtaaaccaaaaatttgcaacacagagcctaaagcactacataaaaaataacataacaactattgcaatctcttattccttc 35860839  T
Q  370 aagttaaccagaacgcaaaattttgcc 396  Q
    ||||||||| |||||||||||||||||    
T  35860838 aagttaacccgaacgcaaaattttgcc 35860812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 286 - 404
Target Start/End: Original strand, 55290519 - 55290637
Alignment:
Q  286 tgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttcttaaagttaaccagaacgc 385  Q
    |||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||| ||||||    
T  55290519 tgcgtaaaccaaaattttgcaacacaaagcctaaaacactacataaaaaataacataacagctattgtaatctcttattccttaaagttaacccgaacgc 55290618  T
Q  386 aaaattttgccctaaattt 404  Q
    |||||||||||||| ||||    
T  55290619 aaaattttgccctagattt 55290637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 272 - 404
Target Start/End: Complemental strand, 8396698 - 8396566
Alignment:
Q  272 gtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttcttaaa 371  Q
    |||||| | |||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  8396698 gtgaaaattaaagctgcgtaaaccaaaattttgtaacacagagcctaaagcactacataaaaaataacataacaactattgtaatctcttattccttaaa 8396599  T
Q  372 gttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||   ||||||||||||||| ||| ||||    
T  8396598 gttaacttaaacgcaaaattttgctctagattt 8396566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 273 - 404
Target Start/End: Complemental strand, 52843117 - 52842987
Alignment:
Q  273 tgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttcttaaag 372  Q
    ||||| |||||| ||||||||||||||||| |||||||||   ||||| ||||||||||||| ||| ||||||||||||||||||||||||| |||||||    
T  52843117 tgaaaatcaaagctgcgtaaaccaaaatttggcaacacagtgactaaaacactacataaaaa-taatataacaactattgtaatatcttattccttaaag 52843019  T
Q  373 ttaaccagaacgcaaaattttgccctaaattt 404  Q
    |||||| |||||||||||||||||||| ||||    
T  52843018 ttaacccgaacgcaaaattttgccctagattt 52842987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 19893285 - 19893419
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| ||| ||||| |||||||||||||||| ||||||||   |||||||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  19893285 atgtgaaaatcatagttgtgtaaaccaaaattttggaacacagagtttaaagcactacataaaaaataacataacaattattgtaatctcttattcctta 19893384  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| ||| ||||||||||| |||| ||||    
T  19893385 aagttaacccgaatgcaaaattttgacctagattt 19893419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 26776543 - 26776676
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| ||| ||| |||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||| |||| ||||    
T  26776543 atgtgaaaatcaaagctgcataa-ccaaaattttgcaacacagagcctaaaacactgcataaaaaataacataacaactattgtaatatcatattcctta 26776641  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||| | |||||||||||||| ||||| ||||    
T  26776642 aagttaatccgaacgcaaaatttttccctagattt 26776676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 270 - 363
Target Start/End: Original strand, 40817284 - 40817377
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttat 363  Q
    |||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  40817284 atgtgaaaatcaaagctgcgtaaaccaaaattttgcaacacagagcctaaagcactacataaaaaataatataacaactattgtaatctcttat 40817377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 270 - 353
Target Start/End: Complemental strand, 18688609 - 18688526
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgt 353  Q
    |||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  18688609 atgtgaaaatcaaagctgcgtaaaccaaaattttgcaacacagagcctaaagcactacataaaaaataacataacaactattgt 18688526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 49 - 253
Target Start/End: Complemental strand, 23270922 - 23270721
Alignment:
Q  49 tgtgagtggttaagtctcacactatttatgaatgtgtaaaatattggatatataagagaggtgactcatatacttgaggcgttgtgattttgggtggaga 148  Q
    |||||||||||||||| |||| | |||||||||||||||||||||||||||| |||| ||| ||||||||||||  || | |||||| ||||| ||||||    
T  23270922 tgtgagtggttaagtcccacattgtttatgaatgtgtaaaatattggatatacaagaaaggcgactcatatact--agtc-ttgtgagtttggatggaga 23270826  T
Q  149 tggagcgtcttcatctcttgcgattttgaaacattaacctgttgctgctctcgtggcatatgaacttctcaacaagtggtatcagagtcttggtttggtt 248  Q
    ||  |  ||| ||||||||||     |||| |||| | |||||| ||||||| || |||  | ||| ||||||||||||||| ||||| |||||| ||||    
T  23270825 tgttggatctccatctcttgcagccctgaatcattgatctgttgttgctctcatgacatccggactcctcaacaagtggtattagagttttggttcggtt 23270726  T
Q  249 tggtg 253  Q
    |||||    
T  23270725 tggtg 23270721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 270 - 400
Target Start/End: Complemental strand, 22522203 - 22522066
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgta----atatc---tta 362  Q
    |||||||| |||| ||||| ||||||||||||||||||||||||  |||||  ||||||||||||||||||||||||||||| ||     ||||   |||    
T  22522203 atgtgaaaatcaatgttgcttaaaccaaaattttgcaacacagagtctaaaatactacataaaaaataacataacaactattatatatcttatcttatta 22522104  T
Q  363 tttcttaaagttaaccagaacgcaaaattttgccctaa 400  Q
    || ||||||| ||||| ||||||||||||||| |||||    
T  22522103 ttccttaaagataacccgaacgcaaaattttgtcctaa 22522066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 49 - 253
Target Start/End: Original strand, 20142279 - 20142477
Alignment:
Q  49 tgtgagtggttaagtctcacactatttatgaatgtgtaaaatattggatatataagagaggtgactcatatacttgaggcgttgtgattttgggtggaga 148  Q
    ||||||||  |||||| |||| | ||||||||| |||||||||||||||||| |||| ||   |||||||||||  || | || ||| ||||| ||||||    
T  20142279 tgtgagtgactaagtcccacattgtttatgaatatgtaaaatattggatatacaagaaag---actcatatact--agtc-ttatgagtttggatggaga 20142372  T
Q  149 tggagcgtcttcatctcttgcgattttgaaacattaacctgttgctgctctcgtggcatatgaacttctcaacaagtggtatcagagtcttggtttggtt 248  Q
    ||  | |||| ||||||||||| |  |||| |||| | |||||| |||||||||| |||  | ||| ||||||||||||||| ||||| |||||| ||||    
T  20142373 tgttgggtctccatctcttgcgctcctgaatcattgatctgttgttgctctcgtgacatccggactcctcaacaagtggtattagagttttggttcggtt 20142472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 31108263 - 31108191
Alignment:
Q  35 tgttgggtttcaagtgtgagtggttaagtctcacactatttatgaatgtgtaaaatattggatatataagaga 107  Q
    |||| ||||||||||||||||| |||||||||||| | | |||||| |  ||| |||||||||||||||||||    
T  31108263 tgttaggtttcaagtgtgagtgattaagtctcacattgtctatgaacgaataatatattggatatataagaga 31108191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 55293591 - 55293635
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  55293591 ttatttcttaaagttaacccgaacgcaaaattttgccctatattt 55293635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 366 - 404
Target Start/End: Complemental strand, 9373300 - 9373262
Alignment:
Q  366 cttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  9373300 cttaaagttaacccgaacgcaaaattttgccctaaattt 9373262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 23161955 - 23162010
Alignment:
Q  95 gatatataagagaggtgactcatatacttgaggcgttgtgattttgggtggagatg 150  Q
    |||||||||||||||||||||||||||  || || ||  |||||||||||||||||    
T  23161955 gatatataagagaggtgactcatatacccgatgccttaagattttgggtggagatg 23162010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 404
Target Start/End: Complemental strand, 9374123 - 9374078
Alignment:
Q  358 tcttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||| ||||||||||| | |||||||||||||||||||||||||    
T  9374123 tcttattccttaaagttaatc-gaacgcaaaattttgccctaaattt 9374078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 404
Target Start/End: Original strand, 16062531 - 16062577
Alignment:
Q  358 tcttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||| ||||||||||||| | | |||||||||||||||||||||    
T  16062531 tcttattacttaaagttaacccgtaagcaaaattttgccctaaattt 16062577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 119
Target Start/End: Original strand, 39854532 - 39854566
Alignment:
Q  85 taaaatattggatatataagagaggtgactcatat 119  Q
    |||||||||||||||||||||||| ||||||||||    
T  39854532 taaaatattggatatataagagagatgactcatat 39854566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 401
Target Start/End: Original strand, 26101600 - 26101641
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaa 401  Q
    ||||||||||||||||||| | |||||||||||||| |||||    
T  26101600 ttatttcttaaagttaacccggacgcaaaattttgctctaaa 26101641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 19361556 - 19361592
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgcc 396  Q
    ||||||||||||||||||| | |||||||||||||||    
T  19361556 ttatttcttaaagttaacccggacgcaaaattttgcc 19361592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 2e-53; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 9151354 - 9151220
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  9151354 atgtgaaaatcaaagctgcgtaaaccaaaattttgcaacacagagcctaaagcactacataaaaaataacataacaactattgtaatatcttaatactta 9151255  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| |||||||||||||||||||| ||||    
T  9151254 aagttaacccgaacgcaaaattttgccctagattt 9151220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 270 - 397
Target Start/End: Complemental strand, 44806513 - 44806386
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  44806513 atgtgaaaatcaaagctgcgtaaaccaaaattttgcaatacagagcctaaaacactacataaaaaataacataacaactattataatatcttatttctta 44806414  T
Q  370 aagttaaccagaacgcaaaattttgccc 397  Q
    ||||||||| ||||||||||||||||||    
T  44806413 aagttaacccgaacgcaaaattttgccc 44806386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 27733060 - 27733194
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| | ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| | ||||| ||||    
T  27733060 atgtgaaaataaaagttgcgtaaaccaaaattttgcaacacagagcctaaaacactacataaaaaataacataacaactattgtaatcttttattcctta 27733159  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| |||||||||||||||||||| ||||    
T  27733160 aagttaacccgaacgcaaaattttgccctagattt 27733194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 39648088 - 39648222
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| ||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  39648088 atgtgaaaatcaaagctgcgtaaaccaaaattttgcaacacagagtctaaaacactacataaaaaataacataacaactattgtaatctcttattcctta 39648187  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| |||||||||||||||||||| ||||    
T  39648188 aagttaacccgaacgcaaaattttgccctagattt 39648222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 270 - 398
Target Start/End: Original strand, 21669338 - 21669466
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| ||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  21669338 atgtgaaaatcaaagctgcataaaccaaaattttgcaacacagatcctaaaacactacataaaaaataacataacaactattgtaatctcttattcctta 21669437  T
Q  370 aagttaaccagaacgcaaaattttgccct 398  Q
    ||||||||| |||||||||||||||||||    
T  21669438 aagttaacccgaacgcaaaattttgccct 21669466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 270 - 397
Target Start/End: Original strand, 35155595 - 35155722
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| ||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  35155595 atgtgaaaatcaaagctgcgtaaaccaaaattttgcaacacagagtctaaaacactacataaaaaataacataacaactattataatatcttattcctta 35155694  T
Q  370 aagttaaccagaacgcaaaattttgccc 397  Q
    ||||||||| ||||||||||||||||||    
T  35155695 aagttaacccgaacgcaaaattttgccc 35155722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 273 - 395
Target Start/End: Complemental strand, 34873752 - 34873630
Alignment:
Q  273 tgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttcttaaag 372  Q
    ||||| |||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  34873752 tgaaaatcaaagctgcgtaaaccaaaattttgcaacacagagcctaaaacactacataaaaaataacataacaactattataatatcttattccttaaag 34873653  T
Q  373 ttaaccagaacgcaaaattttgc 395  Q
    |||||| ||||||||||||||||    
T  34873652 ttaacccgaacgcaaaattttgc 34873630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 31896920 - 31897054
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||  |||||||||||||||||| ||||||||| |||||| ||||||||||||||||| ||||||||||||||||| ||||||| ||||    
T  31896920 atgtgaaaatcaaaactgcgtaaaccaaaattttacaacacagagcctaaaacactacataaaaaataatataacaactattgtaatctcttattcctta 31897019  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| |||||||||||||||||||| ||||    
T  31897020 aagttaacccgaacgcaaaattttgccctagattt 31897054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 273 - 404
Target Start/End: Complemental strand, 4850380 - 4850249
Alignment:
Q  273 tgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttcttaaag 372  Q
    ||||| |||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||| |||| | |||||    
T  4850380 tgaaaatcaaagctgcgtaaaccaaaattttgcaacacagagcctaaagtactacataaaaaataacataataactattgtaatatcatattccctaaag 4850281  T
Q  373 ttaaccagaacgcaaaattttgccctaaattt 404  Q
    |||| | |||||||||||||||||||| ||||    
T  4850280 ttaatccgaacgcaaaattttgccctatattt 4850249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 17172829 - 17172695
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||  ||||||||| |||||||| ||||||||| |||||| ||||||||||||||||| ||||||||||||||||| ||||||| ||||    
T  17172829 atgtgaaaatcaaaactgcgtaaactaaaattttacaacacagagcctaaaacactacataaaaaataatataacaactattgtaatctcttattcctta 17172730  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| |||||||||||||||||||| ||||    
T  17172729 aagttaacccgaacgcaaaattttgccctagattt 17172695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 272 - 396
Target Start/End: Complemental strand, 691221 - 691097
Alignment:
Q  272 gtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttcttaaa 371  Q
    |||||| | |||| ||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  691221 gtgaaaattaaagctgcgtaaaccaaaattttgtaacccagagcctaaagcactacataaaaaataacataacaactattgtaatctcttattccttaaa 691122  T
Q  372 gttaaccagaacgcaaaattttgcc 396  Q
    ||||||  |||||||||||||||||    
T  691121 gttaacttgaacgcaaaattttgcc 691097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 48527518 - 48527652
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||  |||||||||||||||||| ||| ||||| |||||| ||||||||||||||||| ||||||||||||||||| ||||||| ||||    
T  48527518 atgtgaaaatcaaaactgcgtaaaccaaaattttacaatacagagcctaaaacactacataaaaaataatataacaactattgtaatctcttattcctta 48527617  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||| | |||||||||||||||||||| ||||    
T  48527618 aagttaatccgaacgcaaaattttgccctagattt 48527652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 49144141 - 49144275
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||| | |||||| ||| |||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  49144141 atgtgataatcaaagctgcataagtcaaaattttgcaacacagagcctaaagcactacataaaaaataacataacaactattgtaatatcatattcctta 49144240  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||| | |||||||||||||| ||||| ||||    
T  49144241 aagttaatccgaacgcaaaattttaccctagattt 49144275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 294 - 395
Target Start/End: Original strand, 7855094 - 7855195
Alignment:
Q  294 ccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttcttaaagttaaccagaacgcaaaatttt 393  Q
    |||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||    
T  7855094 ccaaaattttgcaacacagagcctaaaacactacataacaaataacataacaactattataatatcttattccttaaagttaacccgaacgcaaaatttt 7855193  T
Q  394 gc 395  Q
    ||    
T  7855194 gc 7855195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 273 - 404
Target Start/End: Complemental strand, 29469150 - 29469019
Alignment:
Q  273 tgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttcttaaag 372  Q
    ||||| ||||||||| ||||||| ||| |||||||||||||  ||||||||||||||||||||||||||||||| ||||| ||| ||||||| |||||||    
T  29469150 tgaaaatcaaagttgtgtaaaccgaaaatttgcaacacagagtctaaagcactacataaaaaataacataacaattattgcaatctcttattccttaaag 29469051  T
Q  373 ttaaccagaacgcaaaattttgccctaaattt 404  Q
    |||||| |||| ||||||||| ||||| ||||    
T  29469050 ttaacccgaacacaaaattttaccctagattt 29469019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 24682384 - 24682518
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||  ||||||| |||||| |||||||||||||  |||||||||||||||||||||||||||| |||||||| ||| ||||||| ||||    
T  24682384 atgtgaaaatcaaaactgcgtaagccaaaaatttgcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattcctta 24682483  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| ||| |||||||||| ||||| ||||    
T  24682484 aagttaacccgaaagcaaaatttttccctagattt 24682518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 270 - 365
Target Start/End: Original strand, 33636982 - 33637076
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttattt 365  Q
    |||||||| | |||||||||||||||||||||| |||||| | | | |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33636982 atgtgaaaattaaagttgcgtaaaccaaaattt-gcaacataaagcttaaagcactacataaaaaataacataacaactattgtaatctcttattt 33637076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 270 - 398
Target Start/End: Complemental strand, 39278173 - 39278057
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||||||||||||||||| |||||| |||||||||||            |||||||||||| ||||||| ||||    
T  39278173 atgtgaaaatcaaagctgcgtaaaccaaaattttgcaacacagatcctaaaacactacataaa------------aactattgtaatctcttattcctta 39278086  T
Q  370 aagttaaccagaacgcaaaattttgccct 398  Q
    ||||||||| |||||||||||||||||||    
T  39278085 aagttaacccgaacgcaaaattttgccct 39278057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 270 - 351
Target Start/End: Original strand, 21598059 - 21598140
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactatt 351  Q
    |||||||| |||| ||||| ||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||    
T  21598059 atgtgaaaatcaatgttgcttaaaccaaaattttgcaacacagagtctaaaacactacataaaaaataacataacaactatt 21598140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 270 - 351
Target Start/End: Original strand, 11835066 - 11835147
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactatt 351  Q
    |||||||| |||| ||||| ||||||||||||||||||||||||  |||||  |||||||||||||||||||||||||||||    
T  11835066 atgtgaaaatcaatgttgcttaaaccaaaattttgcaacacagagtctaaaatactacataaaaaataacataacaactatt 11835147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 24683950 - 24683994
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  24683950 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 24683994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 33637584 - 33637628
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  33637584 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 33637628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 39648784 - 39648828
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  39648784 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 39648828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 49145089 - 49145133
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  49145089 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 49145133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 4849563 - 4849519
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    |||||||||||||||||||  ||||||||||||||||||| ||||    
T  4849563 ttatttcttaaagttaacccaaacgcaaaattttgccctagattt 4849519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 27733880 - 27733916
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgcc 396  Q
    ||||||||||||||||||| |||||||||||||||||    
T  27733880 ttatttcttaaagttaacccgaacgcaaaattttgcc 27733916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 49144961 - 49144997
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgcc 396  Q
    ||||||||||||||||||| |||||||||||||||||    
T  49144961 ttatttcttaaagttaacccgaacgcaaaattttgcc 49144997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 360 - 399
Target Start/End: Original strand, 7855901 - 7855940
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgcccta 399  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  7855901 ttatttcttaaagttaacctggacgcaaaattttgcccta 7855940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 360 - 399
Target Start/End: Complemental strand, 29468558 - 29468519
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgcccta 399  Q
    ||||||||||||||||||| |||||||||||||| |||||    
T  29468558 ttatttcttaaagttaacctgaacgcaaaattttacccta 29468519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 360 - 399
Target Start/End: Complemental strand, 34872923 - 34872884
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgcccta 399  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  34872923 ttatttcttaaagttaacccggacgcaaaattttgcccta 34872884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 404
Target Start/End: Original strand, 32200990 - 32201036
Alignment:
Q  358 tcttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    |||||||| |||||||||||| ||||||||||| |||||||| ||||    
T  32200990 tcttatttattaaagttaacccgaacgcaaaatgttgccctagattt 32201036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 1440673 - 1440608
Alignment:
Q  46 aagtgtgagtggttaagtctcacactatttatgaatgtgtaaaatattggatatataagagaggtg 111  Q
    |||||||||| |||||||||||||  |  ||| ||||  ||||||||| |||||||||||||||||    
T  1440673 aagtgtgagtcgttaagtctcacatcacctataaatggataaaatattagatatataagagaggtg 1440608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 9150755 - 9150711
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    |||||||||||||||||||  ||||||||||||| ||||| ||||    
T  9150755 ttatttcttaaagttaacccaaacgcaaaattttaccctagattt 9150711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 17171476 - 17171432
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||| |||||||||| |||| ||||    
T  17171476 ttatttcttaaagttaacccgaactcaaaattttgtcctagattt 17171432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 31897625 - 31897669
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||| |||||||||| |||| ||||    
T  31897625 ttatttcttaaagttaacccgaactcaaaattttgtcctagattt 31897669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 4e-51; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 41158579 - 41158445
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||    
T  41158579 atgtgaaaatcaaagctgcgtaaaccaaaattttgcaacacagagcctaaagcactacataaaaaacaacataacaactattgtaatctcttattcctta 41158480  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| |||||||||||||||||||| ||||    
T  41158479 aagttaacccgaacgcaaaattttgccctagattt 41158445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 270 - 396
Target Start/End: Complemental strand, 7391253 - 7391127
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7391253 atgtgaaaatcaaagttgcgtaaaccaaaattttgtaacacagagcctagagcactacataaaaaataacataacaactattgtaatatcttattcctta 7391154  T
Q  370 aagttaaccagaacgcaaaattttgcc 396  Q
    ||||||| | |||||||||||||||||    
T  7391153 aagttaatccgaacgcaaaattttgcc 7391127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 44380819 - 44380953
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  44380819 atgtgaaaatcaaagctgcgtaaaccaaaattttgcaacacagagcctaaaacactacataaaaaataacataacaactattgtaatctcttattcctta 44380918  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| |||||||||||||||| ||| ||||    
T  44380919 aagttaacccgaacgcaaaattttgctctagattt 44380953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 270 - 397
Target Start/End: Complemental strand, 24055775 - 24055648
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  24055775 atgtgaaaatcaaagttgcgtaaaccaaaattttgcaacactgagcctaaaacactacataaaaaataacataacaactattataatatcttattcctta 24055676  T
Q  370 aagttaaccagaacgcaaaattttgccc 397  Q
    ||||||||  ||||||||||||||||||    
T  24055675 aagttaactcgaacgcaaaattttgccc 24055648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 270 - 397
Target Start/End: Complemental strand, 36778415 - 36778288
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| | |||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  36778415 atgtgaaaattaaagctgcgtaaaccaaaattttgcaacacagagcctaaaacactacataaaaaataacataacaactattataatatcttattcctta 36778316  T
Q  370 aagttaaccagaacgcaaaattttgccc 397  Q
    ||||||||| ||||||||||||||||||    
T  36778315 aagttaacccgaacgcaaaattttgccc 36778288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 25345929 - 25345795
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||     
T  25345929 atgtgaaaatcaaagttgcgtaaaccaaaattttacaacacagagcctaaagcactacataaaaaataacataacaactattgtaatatcatattccttg 25345830  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||| | |||| ||||||||||||||| ||||    
T  25345829 aagttaatctgaacacaaaattttgccctagattt 25345795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 279 - 404
Target Start/End: Original strand, 41531885 - 41532010
Alignment:
Q  279 tcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttcttaaagttaacc 378  Q
    |||||||||||| |||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |    
T  41531885 tcaaagttgcgttaaccaaaattttgcaatacagagtctaaagcactacataaaaaataacataacaactattgtaatctcttattccttaaagttaatc 41531984  T
Q  379 agaacgcaaaattttgccctaaattt 404  Q
     |||||||||||||||||||||||||    
T  41531985 cgaacgcaaaattttgccctaaattt 41532010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 270 - 393
Target Start/End: Original strand, 42244442 - 42244565
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  42244442 atgtgaaaatcaaagttgcgtaaaccaaaattttgcaacacagagtctaaaacactacataaaaaataacataacaactattataatatcttattcctta 42244541  T
Q  370 aagttaaccagaacgcaaaatttt 393  Q
    ||||||||| ||||| ||||||||    
T  42244542 aagttaaccggaacgtaaaatttt 42244565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 270 - 396
Target Start/End: Original strand, 4464461 - 4464587
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  4464461 atgtgaaaatcaaagctgcgtaaaccaaaattttgcaacacagagcctaaagcactgcataaaaaataacataacaactattgtaatatcttattcctta 4464560  T
Q  370 aagttaaccagaacgcaaaattttgcc 396  Q
    |||||||   ||||| |||||||||||    
T  4464561 aagttaattcgaacgtaaaattttgcc 4464587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 25361450 - 25361316
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||| || |||||||||||| ||||    
T  25361450 atgtgaaaatcaaagctgcgtaaaccaaaattttgcaacacatagcctaaaacactacataaaaaataacataacaactgttctaatatcttattcctta 25361351  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| ||| |||||||||||||| ||||||    
T  25361350 aagttaacccgaaggcaaaattttgcccaaaattt 25361316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 270 - 400
Target Start/End: Complemental strand, 41978794 - 41978664
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||    
T  41978794 atgtgaaaatcaaagctgcgtaaaccaaaattttgcaacacaaagcctaaagcactacataaaaaattacataacaactattgtaatctcttattcctta 41978695  T
Q  370 aagttaaccagaacgcaaaattttgccctaa 400  Q
    ||||||||| |||| || |||||||||||||    
T  41978694 aagttaacccgaacacagaattttgccctaa 41978664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 270 - 397
Target Start/End: Complemental strand, 9474058 - 9473931
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| ||||||| |||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  9474058 atgtgaaaatcaaagctgcgtaatccaaaattttacaacacagagcctaaaacactacataaaaaataacataacaactattataatatcttattcctta 9473959  T
Q  370 aagttaaccagaacgcaaaattttgccc 397  Q
    ||||||||| |||| |||||||||||||    
T  9473958 aagttaacccgaacacaaaattttgccc 9473931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 8762948 - 8762814
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||| |||||||||||||  |||||||||||||||||||||||||||| |||||||| ||| ||||||| ||||    
T  8762948 atgtgaaaatcaaagctgcgtaaaccaaaaatttgcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattcctta 8762849  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| |||||||||||||| ||||| ||||    
T  8762848 aagttaacccgaacgcaaaatttttccctagattt 8762814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 18375664 - 18375798
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||  |||||||||||||||||| ||||||| | |||||| ||||||||||||||||| ||||||||||||||||| ||||||| ||||    
T  18375664 atgtgaaaatcaaaactgcgtaaaccaaaattttacaacacatagcctaaaacactacataaaaaataatataacaactattgtaatctcttattcctta 18375763  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| |||||||||||||||||||| ||||    
T  18375764 aagttaacccgaacgcaaaattttgccctagattt 18375798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 270 - 397
Target Start/End: Original strand, 40586549 - 40586675
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||||||||||||||||| ||||||  ||||||| ||||||||||||||||||||| |||||||||||| ||||    
T  40586549 atgtgaaaatcaaagctgcgtaaaccaaaattttgcaacacagagcctaaaa-actacatgaaaaataacataacaactattataatatcttattcctta 40586647  T
Q  370 aagttaaccagaacgcaaaattttgccc 397  Q
    ||||||||  ||||||||||||||||||    
T  40586648 aagttaactcgaacgcaaaattttgccc 40586675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 1945123 - 1944989
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||| |||||||||||||  |||||||||||||||||||||||||||| |||||||| ||| ||||||| ||||    
T  1945123 atgtgaaaatcaaagctgcgtaaaccaaaaatttgcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattcctta 1945024  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| ||| |||||||||| ||||| ||||    
T  1945023 aagttaacccgaaagcaaaatttttccctagattt 1944989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 8160526 - 8160660
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||| |||||||||||||  |||||||||||||||||||||||||||| |||||||| ||| ||||||| ||||    
T  8160526 atgtgaaaatcaaagctgcgtaaaccaaaaatttgcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattcctta 8160625  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| ||| |||||||||| ||||| ||||    
T  8160626 aagttaacccgaaagcaaaatttttccctagattt 8160660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 25618606 - 25618740
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| || ||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||| |||| ||||    
T  25618606 atgtgaaaatcaaagctgggtaaaccaaaattttgcaacacagagcctaaaacactacataaaaaataatataacaactattgtaatatcatattcctta 25618705  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    |||||||    || |||||||||||||||| ||||    
T  25618706 aagttaattcaaatgcaaaattttgccctagattt 25618740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 25834104 - 25834238
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||| ||||| |||||||||||||  |||||||||||||||||||||||||||| |||||||| ||| ||||||| ||||    
T  25834104 atgtgaaaatcaaagctgcgtaaatcaaaaatttgcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattcctta 25834203  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| ||| |||||||||| ||||| ||||    
T  25834204 aagttaacccgaaagcaaaatttttccctagattt 25834238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 32847131 - 32846997
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||| ||||| |||||||||||||  |||||||||||||||||||||||||||| |||||||| ||| ||||||| ||||    
T  32847131 atgtgaaaatcaaagctgcgtaaagcaaaaatttgcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattcctta 32847032  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||  ||| |||||| ||| ||||| ||||    
T  32847031 aagttaactcgaaagcaaaaattttccctagattt 32846997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 11806419 - 11806492
Alignment:
Q  35 tgttgggtttcaagtgtgagtggttaagtctcacactatttatgaatgtgtaaaatattggatatataagagag 108  Q
    ||||||||| || ||||||||| ||||||| |||| | | ||||||||||||||||||||||||||||||||||    
T  11806419 tgttgggttacatgtgtgagtgattaagtcccacattgtatatgaatgtgtaaaatattggatatataagagag 11806492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 150
Target Start/End: Original strand, 5072975 - 5073088
Alignment:
Q  38 tgggtttcaagtgtgagtggttaagtctcacactatttatgaatgtgt-aaaatattggatatataagagaggtgactcatatacttgaggcgttgtgat 136  Q
    |||||||||||||||||| ||||| |||||||    ||||||||| || ||||| |||||||||||||||||| | ||||||||| | | || ||  | |    
T  5072975 tgggtttcaagtgtgagtagttaaatctcacatcggttatgaatgggtaaaaatgttggatatataagagaggcgtctcatatacgtaatgccttaaggt 5073074  T
Q  137 tttgggtggagatg 150  Q
    ||||||||||||||    
T  5073075 tttgggtggagatg 5073088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 1944301 - 1944257
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  1944301 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 1944257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 4465281 - 4465325
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  4465281 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 4465325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 8161328 - 8161372
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  8161328 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 8161372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 8162071 - 8162115
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  8162071 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 8162115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 8761493 - 8761449
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  8761493 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 8761449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 8762125 - 8762081
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  8762125 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 8762081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 9433648 - 9433568
Alignment:
Q  41 gtttcaagtgtgagtggttaagtctcacactatttatgaatgtgtaaaatattggatatataagagaggtgactcatatac 121  Q
    ||||||||||||||||||||||||||| |   ||||| |||||  ||||| || ||||||| ||||| |||||||||||||    
T  9433648 gtttcaagtgtgagtggttaagtctcatatattttatcaatgtagaaaatgtttgatatattagagatgtgactcatatac 9433568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 12761349 - 12761305
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  12761349 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 12761305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 25834927 - 25834971
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  25834927 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 25834971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 25835559 - 25835603
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  25835559 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 25835603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 32844944 - 32844900
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  32844944 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 32844900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 32845688 - 32845644
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  32845688 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 32845644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 41157761 - 41157717
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||    
T  41157761 ttatttcttaaagttaacccgaacgcaaaattttaccctaaattt 41157717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 1943558 - 1943514
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||    
T  1943558 ttatttcttaaagttaacccgaacgtaaaattttgccctagattt 1943514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 32846321 - 32846277
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    |||||| |||||||||||| |||||||||||||||||||| ||||    
T  32846321 ttattttttaaagttaacccgaacgcaaaattttgccctagattt 32846277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 360 - 399
Target Start/End: Complemental strand, 9473344 - 9473305
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgcccta 399  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  9473344 ttatttcttaaagttaacccggacgcaaaattttgcccta 9473305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 34894262 - 34894211
Alignment:
Q  353 taatatcttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    |||| ||||||| ||||||||||| | ||||||||||||||||| |||||||    
T  34894262 taatctcttattccttaaagttaaaccgaacgcaaaattttgccttaaattt 34894211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 34894667 - 34894616
Alignment:
Q  353 taatatcttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    |||| ||||||| ||||||||||||| ||||| |||||||||||||| ||||    
T  34894667 taatctcttattccttaaagttaacctgaacgtaaaattttgccctagattt 34894616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 37588310 - 37588361
Alignment:
Q  353 taatatcttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    |||| ||||||| ||||||||||||| |||||| ||||||||||||| ||||    
T  37588310 taatctcttattccttaaagttaacccgaacgccaaattttgccctagattt 37588361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 361 - 396
Target Start/End: Original strand, 44381597 - 44381632
Alignment:
Q  361 tatttcttaaagttaaccagaacgcaaaattttgcc 396  Q
    |||||||||||||||||| |||||||||||||||||    
T  44381597 tatttcttaaagttaacccgaacgcaaaattttgcc 44381632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 64
Target Start/End: Original strand, 23125199 - 23125228
Alignment:
Q  35 tgttgggtttcaagtgtgagtggttaagtc 64  Q
    ||||||||||||||||||||||||||||||    
T  23125199 tgttgggtttcaagtgtgagtggttaagtc 23125228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 397
Target Start/End: Original strand, 37588478 - 37588522
Alignment:
Q  353 taatatcttatttcttaaagttaaccagaacgcaaaattttgccc 397  Q
    |||| ||||||| ||| ||||||||| ||||||||||||||||||    
T  37588478 taatctcttattccttgaagttaacccgaacgcaaaattttgccc 37588522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 4e-51; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 270 - 396
Target Start/End: Original strand, 12680741 - 12680867
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12680741 atgtgaaaatcaaagttgcgtaaaccaaaattttgcaacatagagcctaaagcactacataaaaaataacataacaactattgtaatatcttattcctta 12680840  T
Q  370 aagttaaccagaacgcaaaattttgcc 396  Q
    ||||||| | |||||||||||||||||    
T  12680841 aagttaatccgaacgcaaaattttgcc 12680867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 17741598 - 17741464
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| || ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  17741598 atgtgaaaatcaaagctgtgtaaaccaaaattttgcaacacagagcctaaaacactacataaaaaataacataacaactattgtaatctcttattcctta 17741499  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| |||||||||||||| ||||||||||    
T  17741498 aagttaaccggaacgcaaaatttttccctaaattt 17741464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 8532162 - 8532028
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||| | ||    
T  8532162 atgtgaaaatcaaagctgcgtaaaccaaaattttgcaacacagagcctaaagtactacataaaaaataacataacaactattgtaatctcttattcccta 8532063  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||  |||||||||||||||||||| ||||    
T  8532062 aagttaactcgaacgcaaaattttgccctagattt 8532028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 46106357 - 46106223
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  46106357 atgtgaaaatcaaggctgcgtaaaccaaaattttgcaacacagagcctaaagcactacataaaaaataacataacaactattgtaatatcatattcctta 46106258  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||| | |||| ||||||||||||||| ||||    
T  46106257 aagttaatccgaacacaaaattttgccctagattt 46106223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 270 - 394
Target Start/End: Complemental strand, 2118125 - 2118001
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||    
T  2118125 atgtgaaaatcaaagttgcgtaaaccaaaattttgcaacacagagcctaaagcactgcataaaaaataacataacaactattataatatcttattcctta 2118026  T
Q  370 aagttaaccagaacgcaaaattttg 394  Q
    |||||||   |||||||||||||||    
T  2118025 aagttaattcgaacgcaaaattttg 2118001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 273 - 397
Target Start/End: Complemental strand, 13172881 - 13172757
Alignment:
Q  273 tgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttcttaaag 372  Q
    ||||| ||||| ||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| |||||||||||| |||||||    
T  13172881 tgaaaatcaaaattgcgtaaaccaaaattttgcaacacagagcctaaaacattacataaaaaataacataacaactattataatatcttattccttaaag 13172782  T
Q  373 ttaaccagaacgcaaaattttgccc 397  Q
    |||||| ||||||||||||||||||    
T  13172781 ttaacccgaacgcaaaattttgccc 13172757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 273 - 397
Target Start/End: Original strand, 30527697 - 30527821
Alignment:
Q  273 tgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttcttaaag 372  Q
    ||||| |||||| |||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  30527697 tgaaaatcaaagctgcgtaaaccaaaattttgcaatacagagcctaaaacactacataaaaaataacataacaactattataatatcttattccttaaag 30527796  T
Q  373 ttaaccagaacgcaaaattttgccc 397  Q
    |||||| ||||||||||||||||||    
T  30527797 ttaacccgaacgcaaaattttgccc 30527821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 270 - 394
Target Start/End: Original strand, 47555532 - 47555656
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||| ||||    
T  47555532 atgtgaaaatcaaaactgcgtaaaccaaaattttgcaacacagagcctaaagcactacataaaaaataacataacaactattgtaatcttttattcctta 47555631  T
Q  370 aagttaaccagaacgcaaaattttg 394  Q
    ||||||||| |||||||||||||||    
T  47555632 aagttaacccgaacgcaaaattttg 47555656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 270 - 397
Target Start/End: Complemental strand, 3759215 - 3759088
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||||||||||||||||| | |||| ||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  3759215 atgtgaaaatcaaagctgcgtaaaccaaaattttgcaacacagagcgtaaaacactaaataaaaaataacataacaactattataatatcttattcctta 3759116  T
Q  370 aagttaaccagaacgcaaaattttgccc 397  Q
    ||||||||| ||||||||||||||||||    
T  3759115 aagttaacccgaacgcaaaattttgccc 3759088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 270 - 397
Target Start/End: Original strand, 36741906 - 36742033
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||||||||||||| | | |||||| |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  36741906 atgtgaaaatcaaagctgcgtaaaccaaaattttgcaacataaagcctaaaacactacataaaaaataacataacaactattataatatcttattcctta 36742005  T
Q  370 aagttaaccagaacgcaaaattttgccc 397  Q
    ||||||||| ||||||||||||||||||    
T  36742006 aagttaacccgaacgcaaaattttgccc 36742033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 43023962 - 43023826
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaa--taacataacaactattgtaatatcttatttct 367  Q
    |||||||| ||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||  ||||||||||||||||| ||| ||||||| ||    
T  43023962 atgtgaaaatcaaagttgcgtaaaccaaaaatttgcaacacagagcctaaaacactacataaaaaaaataacataacaactattgcaatctcttattcct 43023863  T
Q  368 taaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||| |||||||||||||||||||| ||||    
T  43023862 taaagttaacccgaacgcaaaattttgccctagattt 43023826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 39404698 - 39404832
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| ||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| | ||||| ||||    
T  39404698 atgtgaaaatcaaagctgcgtaaactaaaaatttgcaacacagagcctaaagcactacataaaaaataacataacaactattgcaatcttttattcctta 39404797  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| |||||||||||||| ||||| ||||    
T  39404798 aagttaacctgaacgcaaaattttaccctagattt 39404832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 39713602 - 39713736
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||  |||||||||||||||||| ||||||||| |||||| ||||||||||||||||| ||||||||||||||||| ||||||| ||||    
T  39713602 atgtgaaaatcaaaactgcgtaaaccaaaattttacaacacagagcctaaaacactacataaaaaataatataacaactattgtaatctcttattcctta 39713701  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| ||||||||||||| |||||| ||||    
T  39713702 aagttaacccgaacgcaaaatttggccctagattt 39713736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 8964769 - 8964635
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||| |||||||||||||  |||||||||||||||||||||||||||| |||||||| ||| ||||||| ||||    
T  8964769 atgtgaaaatcaaagctgcgtaaaccaaaaatttgcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattcctta 8964670  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| ||| |||||||||| ||||| ||||    
T  8964669 aagttaacccgaaagcaaaatttttccctagattt 8964635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 8989136 - 8989002
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||| |||||||||||||  |||||||||||||||||||||||||||| |||||||| ||| ||||||| ||||    
T  8989136 atgtgaaaatcaaagctgcgtaaaccaaaaatttgcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattcctta 8989037  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| ||| |||||||||| ||||| ||||    
T  8989036 aagttaacccgaaagcaaaatttttccctagattt 8989002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 9887377 - 9887511
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||| |||||||||||||  |||||||||||||||||||||||||||| |||||||| ||| ||||||| ||||    
T  9887377 atgtgaaaatcaaagctgcgtaaaccaaaaatttgcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattcctta 9887476  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| ||| |||||||||| ||||| ||||    
T  9887477 aagttaacccgaaagcaaaatttttccctagattt 9887511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 37352036 - 37351902
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||| |||||||||||||  |||||||||||||||||||||||||||| |||||||| ||| ||||||| ||||    
T  37352036 atgtgaaaatcaaagctgcgtaaaccaaaaatttgcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattcctta 37351937  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| ||| |||||||||| ||||| ||||    
T  37351936 aagttaacccgaaagcaaaatttttccctagattt 37351902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 37356935 - 37356801
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||| |||||||||||||  |||||||||||||||||||||||||||| |||||||| ||| ||||||| ||||    
T  37356935 atgtgaaaatcaaagctgcgtaaaccaaaaatttgcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattcctta 37356836  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| ||| |||||||||| ||||| ||||    
T  37356835 aagttaacccgaaagcaaaatttttccctagattt 37356801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 50043272 - 50043138
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||| |||||||||||||  |||||||||||||||||||||||||||| |||||||| ||| ||||||| ||||    
T  50043272 atgtgaaaatcaaagctgcgtaaaccaaaaatttgcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattcctta 50043173  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| ||| |||||||||| ||||| ||||    
T  50043172 aagttaacccgaaagcaaaatttttccctagattt 50043138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 270 - 397
Target Start/End: Original strand, 50118174 - 50118301
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| | |||| ||||||||| |||||||||||||| ||| |||||| ||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  50118174 atgtgaaaatgaaagctgcgtaaactaaaattttgcaacatagagcctaaaacactatataaaaaataacataacaactattataatatcttattcctta 50118273  T
Q  370 aagttaaccagaacgcaaaattttgccc 397  Q
    || |||||| ||||||||||||||||||    
T  50118274 aatttaacccgaacgcaaaattttgccc 50118301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 16653130 - 16652996
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| ||||||||| |||| |||||||||||||  |||||||||||||||||||||||||||| |||||||| ||| ||||||| ||||    
T  16653130 atgtgaaaatcaaagctgcgtaaactaaaaatttgcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattcctta 16653031  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| ||| |||||||||| ||||| ||||    
T  16653030 aagttaacccgaaagcaaaatttttccctagattt 16652996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 24944238 - 24944374
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaa--cctaaagcactacataaaaaataacataacaactattgtaatatcttatttct 367  Q
    |||||||| |||||| |||||||||||||| |||| ||||||||   |||||||||||||||||||||||||||||||||||||||||| | | ||| ||    
T  24944238 atgtgaaaatcaaagctgcgtaaaccaaaaatttgtaacacagagagcctaaagcactacataaaaaataacataacaactattgtaatctttaattcct 24944337  T
Q  368 taaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||| |||||||||||||| ||||| ||||    
T  24944338 taaagttaacccgaacgcaaaattttaccctagattt 24944374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 270 - 393
Target Start/End: Complemental strand, 24549358 - 24549235
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| | |||| |||||||||||||||||||||||||||| |||||| |||||||||| |||| |||||||||||||| |||||||||||| ||||    
T  24549358 atgtgaaaatgaaagctgcgtaaaccaaaattttgcaacacagagcctaaaacactacataacaaatgacataacaactattataatatcttattcctta 24549259  T
Q  370 aagttaaccagaacgcaaaatttt 393  Q
    || |||||| ||| ||||||||||    
T  24549258 aatttaacccgaatgcaaaatttt 24549235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 273 - 397
Target Start/End: Complemental strand, 20590936 - 20590811
Alignment:
Q  273 tgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaa-taacataacaactattgtaatatcttatttcttaaa 371  Q
    ||||| |||||| ||| ||||||||||||||||||||| || |||||| |||||||||||||| |||||||||||||||| |||||||||||| ||||||    
T  20590936 tgaaaatcaaagctgcataaaccaaaattttgcaacactgagcctaaaacactacataaaaaaataacataacaactattataatatcttattccttaaa 20590837  T
Q  372 gttaaccagaacgcaaaattttgccc 397  Q
     |||||| ||||| ||||||||||||    
T  20590836 attaacccgaacgtaaaattttgccc 20590811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 271 - 404
Target Start/End: Complemental strand, 52802868 - 52802735
Alignment:
Q  271 tgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttcttaa 370  Q
    ||||||| |||||  ||||||||| ||||||||  |||||||| |||||| ||||||||||||||||| ||||||||||||||||| ||||||| |||||    
T  52802868 tgtgaaaatcaaaactgcgtaaactaaaattttataacacagagcctaaaacactacataaaaaataatataacaactattgtaatctcttattccttaa 52802769  T
Q  371 agttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||  ||||| ||||||||||||| ||||    
T  52802768 agttaacccaaacgctaaattttgccctagattt 52802735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 270 - 353
Target Start/End: Complemental strand, 5759277 - 5759194
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgt 353  Q
    |||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  5759277 atgtgaaaatcaaagctgcgtaaaccaaaattttgcaacacagagcctaaagcactacataaaaaataacataacaactattgt 5759194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 29713759 - 29713626
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||||| |||||||||||| |||||| ||||||  ||||| ||||||||||||||||| ||||||| ||||| ||| ||||||| ||||    
T  29713759 atgtgaaaatcaaagtt-cgtaaaccaaaaatttgcatcacagagtctaaaacactacataaaaaataaaataacaattattgcaatctcttattcctta 29713661  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| |||| ||||||||| ||||| ||||    
T  29713660 aagttaacccgaacacaaaattttaccctagattt 29713626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 8987681 - 8987637
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  8987681 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 8987637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 8988313 - 8988269
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  8988313 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 8988269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 9888209 - 9888253
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  9888209 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 9888253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 20590178 - 20590134
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  20590178 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 20590134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 24944850 - 24944894
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  24944850 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 24944894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 37350581 - 37350537
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  37350581 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 37350537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 37351213 - 37351169
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  37351213 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 37351169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 46105381 - 46105337
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  46105381 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 46105337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 396
Target Start/End: Original strand, 42349529 - 42349572
Alignment:
Q  353 taatatcttatttcttaaagttaaccagaacgcaaaattttgcc 396  Q
    |||||||||||| ||||||||||||| |||||||||||||||||    
T  42349529 taatatcttattccttaaagttaacccgaacgcaaaattttgcc 42349572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 399
Target Start/End: Complemental strand, 43022619 - 43022580
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgcccta 399  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  43022619 ttatttcttaaagttaacccgaacgcaaaattttgcccta 43022580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 2117306 - 2117262
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||| ||||| ||||    
T  2117306 ttatttcttaaagttaacccgaacgcaaaattttaccctagattt 2117262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 16904829 - 16904785
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    |||||||||||||||||||  ||||||||||||||||||| ||||    
T  16904829 ttatttcttaaagttaacccaaacgcaaaattttgccctagattt 16904785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 24947566 - 24947610
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||| ||||| ||||    
T  24947566 ttatttcttaaagttaacccgaacgcaaaattttaccctagattt 24947610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 29713165 - 29713129
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgcc 396  Q
    ||||||||||||||||||| |||||||||||||||||    
T  29713165 ttatttcttaaagttaacctgaacgcaaaattttgcc 29713129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 43023135 - 43023091
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||  |||||||||||||||||||| ||||    
T  43023135 ttatttcttaaagttaactcgaacgcaaaattttgccctagattt 43023091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 360 - 399
Target Start/End: Complemental strand, 24548529 - 24548490
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgcccta 399  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  24548529 ttatttcttaaagttaacccggacgcaaaattttgcccta 24548490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 396
Target Start/End: Complemental strand, 26602813 - 26602775
Alignment:
Q  358 tcttatttcttaaagttaaccagaacgcaaaattttgcc 396  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  26602813 tcttattccttaaagttaacccgaacgcaaaattttgcc 26602775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 396
Target Start/End: Complemental strand, 26603582 - 26603544
Alignment:
Q  358 tcttatttcttaaagttaaccagaacgcaaaattttgcc 396  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  26603582 tcttattccttaaagttaacctgaacgcaaaattttgcc 26603544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 396
Target Start/End: Original strand, 37061526 - 37061564
Alignment:
Q  358 tcttatttcttaaagttaaccagaacgcaaaattttgcc 396  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  37061526 tcttattccttaaagttaacccgaacgcaaaattttgcc 37061564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 404
Target Start/End: Original strand, 42348387 - 42348433
Alignment:
Q  358 tcttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||| ||||||||||||| ||||||||||||||| |||| ||||    
T  42348387 tcttattccttaaagttaacctgaacgcaaaattttgtcctagattt 42348433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 404
Target Start/End: Original strand, 48808234 - 48808280
Alignment:
Q  358 tcttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    |||||||| |||||||||| | |||||||||||||||||||| ||||    
T  48808234 tcttattttttaaagttaatccgaacgcaaaattttgccctagattt 48808280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 404
Target Start/End: Original strand, 48808351 - 48808397
Alignment:
Q  358 tcttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||| ||||||||||||| ||| ||||||| |||||||||||||    
T  48808351 tcttattccttaaagttaacccgaatgcaaaatgttgccctaaattt 48808397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 39405531 - 39405575
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| ||| ||||||| |||||||| ||||    
T  39405531 ttatttcttaaagttaacccgaatgcaaaatcttgccctagattt 39405575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 39714357 - 39714401
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||| |||||||||| |||| ||||    
T  39714357 ttatttcttaaagttaacccgaactcaaaattttgtcctagattt 39714401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 52801474 - 52801430
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||| |||||||||| |||| ||||    
T  52801474 ttatttcttaaagttaacccgaactcaaaattttgtcctagattt 52801430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 4e-51; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 19320527 - 19320661
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  19320527 atgtgaaaatcaaagttgcgtaaaccaaaattttgtaacacagagcctaaaacactacataaaaaataacataacaactattataatatcttattcctta 19320626  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| |||||||||||||||||||| ||||    
T  19320627 aagttaacccgaacgcaaaattttgccctagattt 19320661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 47137793 - 47137659
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||| ||| |||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||    
T  47137793 atgtaaaaatcaaagctgcataaaccaaaattttgcaacacagagcctaaagcactacataaaaaataacataataactattgtaatctcttattcctta 47137694  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| |||||||||||||||||||| ||||    
T  47137693 aagttaacccgaacgcaaaattttgccctagattt 47137659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 270 - 396
Target Start/End: Complemental strand, 5428250 - 5428124
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5428250 atgtgaaaatcaaagctgcgtaaaccaaaattttgcaacacagagcctaaaacactacataaaaaataacataacaactattgtaatatcttattcctta 5428151  T
Q  370 aagttaaccagaacgcaaaattttgcc 396  Q
    |||||||   ||||| |||||||||||    
T  5428150 aagttaattcgaacgtaaaattttgcc 5428124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 16302077 - 16301943
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||  |||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||| || ||||    
T  16302077 atgtgaaaatcaaatctgcgtaaaccaaaattttgcaacacagagcctaaaacactacataaaaaacaacataacaactattgtaatatcttgttcctta 16301978  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||| | |||||||||||||||||||| ||||    
T  16301977 aagttaatccgaacgcaaaattttgccctagattt 16301943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 50563407 - 50563273
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| ||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||| ||||||||||||||||||||| ||||||| ||||    
T  50563407 atgtgaaaatcaaagttgcgtaaaccaaaattttacaacacagagcctaaaacactacataaaaactaacataacaactattgtaatctcttattcctta 50563308  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| ||||| ||||||||| |||| ||||    
T  50563307 aagttaacccgaacgtaaaattttgacctagattt 50563273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 46623499 - 46623608
Alignment:
Q  286 tgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttcttaaagttaaccagaacgc 385  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||    
T  46623499 tgcgtaaaccaaaattttgcaacacagagcctaaaacactacataaaaaataacataacaactattataatatcttattccttaaagttaacccgaacgc 46623598  T
Q  386 aaaattttgc 395  Q
    ||||||||||    
T  46623599 aaaattttgc 46623608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 29184584 - 29184718
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||  ||||||||| |||||||| ||||||||| |||||| ||||||||||||||||| ||||||||||||||||| ||||||| ||||    
T  29184584 atgtgaaaatcaaaactgcgtaaactaaaattttacaacacagagcctaaaacactacataaaaaataatataacaactattgtaatctcttattcctta 29184683  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| |||||||||||||||||||| ||||    
T  29184684 aagttaacccgaacgcaaaattttgccctagattt 29184718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 33074338 - 33074472
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| ||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||| ||||| ||| ||||||| ||||    
T  33074338 atgtgaaaatcaaagttgcgtaaaccaaaaatttgcaacacagagtctaaagcactacataaaaaataacataacaattattgcaatctcttattcctta 33074437  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| |||| ||||||||| ||||| ||||    
T  33074438 aagttaacccgaacacaaaattttaccctagattt 33074472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 33363507 - 33363373
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| ||||| |||||||||| |||||||| ||||||||| ||||||  |||||||||||||||| ||||||||||||||||| ||||||| ||||    
T  33363507 atgtgaaaatcaaaattgcgtaaactaaaattttacaacacagagcctaaaatactacataaaaaataatataacaactattgtaatctcttattcctta 33363408  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| |||||||||||||||||||| ||||    
T  33363407 aagttaacccgaacgcaaaattttgccctagattt 33363373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 271 - 404
Target Start/End: Complemental strand, 4893902 - 4893769
Alignment:
Q  271 tgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttcttaa 370  Q
    ||||||| |||||  ||||||||| |||||||| ||||||||| |||||| ||||||||||||||||| ||||||||||||||||| ||||||| |||||    
T  4893902 tgtgaaaatcaaaactgcgtaaactaaaattttacaacacagagcctaaaacactacataaaaaataatataacaactattgtaatctcttattccttaa 4893803  T
Q  371 agttaaccagaacgcaaaattttgccctaaattt 404  Q
    |||||||| |||||||||||||||||||| ||||    
T  4893802 agttaacccgaacgcaaaattttgccctagattt 4893769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 24289308 - 24289442
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||| |||||||||||||  |||||||||||||||||||||||||||| |||||||| ||| ||||||| ||||    
T  24289308 atgtgaaaatcaaagctgcgtaaaccaaaaatttgcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattcctta 24289407  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| ||| |||||||||| ||||| ||||    
T  24289408 aagttaacccgaaagcaaaatttttccctagattt 24289442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 28573095 - 28572961
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||| |||||||||||||  ||||| |||||||||||||||||||||| |||||||| ||| ||||||| ||||    
T  28573095 atgtgaaaatcaaagctgcgtaaaccaaaaatttgcaacacagagtctaaaacactacataaaaaataacataataactattgcaatctcttattcctta 28572996  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| ||| |||||||||| ||||| ||||    
T  28572995 aagttaacccgaaagcaaaatttttccctagattt 28572961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 51964570 - 51964704
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||| |||||||||||||||||||| ||||  ||| ||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  51964570 atgtgaaaatcaaaggtgcggaaaccaaaattttgcaacactgaactaaaaacactacataaaaaataacataacaattattgtaatctcttattcctta 51964669  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| ||| ||||||||||| |||| ||||    
T  51964670 aagttaacccgaaggcaaaattttgtcctagattt 51964704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 273 - 404
Target Start/End: Complemental strand, 1375914 - 1375783
Alignment:
Q  273 tgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttcttaaag 372  Q
    ||||| ||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||||||||||||||| ||||| ||| ||||||| |||||||    
T  1375914 tgaaaatcaaagttgcgtaaaccgaaaatttgcaacacagagtctaaagcactacataaaaaataacataacaattattgcaatctcttattccttaaag 1375815  T
Q  373 ttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||  ||| ||||||||| ||||| ||||    
T  1375814 ttaacccaaacacaaaattttaccctagattt 1375783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 273 - 404
Target Start/End: Original strand, 22194577 - 22194708
Alignment:
Q  273 tgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttcttaaag 372  Q
    ||||| ||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||||||||||||||| ||||| ||| ||||||| |||||||    
T  22194577 tgaaaatcaaagttgcgtaaaccgaaaatttgcaacacagagtctaaagcactacataaaaaataacataacaattattgcaatctcttattccttaaag 22194676  T
Q  373 ttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||  ||| ||||||||| ||||| ||||    
T  22194677 ttaacccaaacacaaaattttaccctagattt 22194708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 270 - 397
Target Start/End: Complemental strand, 38896749 - 38896623
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||||||||||||| ||| ||||||  ||||||| ||||||||||||||||||||| |||||||||||| ||||    
T  38896749 atgtgaaaatcaaagctgcgtaaaccaaaattttgcaacatagagcctaaaa-actacatgaaaaataacataacaactattataatatcttattcctta 38896651  T
Q  370 aagttaaccagaacgcaaaattttgccc 397  Q
    || |||||  ||||||||||||||||||    
T  38896650 aaattaactcgaacgcaaaattttgccc 38896623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 1828373 - 1828239
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| || ||||||||| | |||| |||||| |  |||||||||| ||||||||||||||||| || ||||| ||| ||||||| ||||    
T  1828373 atgtgaaaatcaaagctgtgtaaaccaagaatttgtaacacaaagtctaaagcactgcataaaaaataacataataattattgcaatctcttattcctta 1828274  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| |||||||||| ||| ||||| ||||    
T  1828273 aagttaacccgaacgcaaaaattttccctagattt 1828239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 35 - 119
Target Start/End: Original strand, 11199914 - 11199998
Alignment:
Q  35 tgttgggtttcaagtgtgagtggttaagtctcacactatttatgaatgtgtaaaatattggatatataagagaggtgactcatat 119  Q
    |||||||||| |||||||||||||||||||||||| |   |||||||  ||||||| ||||||||||||||||||||||||||||    
T  11199914 tgttgggttttaagtgtgagtggttaagtctcacattgcctatgaataggtaaaatgttggatatataagagaggtgactcatat 11199998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 329 - 404
Target Start/End: Complemental strand, 52312099 - 52312024
Alignment:
Q  329 taaaaaataacataacaactattgtaatatcttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    |||||||||||||||||||||||||||| |||||||  ||||||||||||  || |||||||||||||||| ||||    
T  52312099 taaaaaataacataacaactattgtaatttcttattctttaaagttaacccaaatgcaaaattttgccctagattt 52312024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 270 - 343
Target Start/End: Complemental strand, 49587051 - 49586978
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataa 343  Q
    |||| ||| ||||| ||| ||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  49587051 atgtaaaaatcaaaattgtgtaaaccaaaattttgcaacacagagcctaaaacactatataaaaaataacataa 49586978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 119
Target Start/End: Original strand, 48273210 - 48273294
Alignment:
Q  35 tgttgggtttcaagtgtgagtggttaagtctcacactatttatgaatgtgtaaaatattggatatataagagaggtgactcatat 119  Q
    |||||| || ||||||||||||||||||||||| |  || |||| ||||||||||||| |||| ||||||| |||| ||||||||    
T  48273210 tgttggattccaagtgtgagtggttaagtctcatatcatctatggatgtgtaaaatatcggatttataagataggtaactcatat 48273294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 19321236 - 19321280
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  19321236 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 19321280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 28571515 - 28571471
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  28571515 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 28571471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 28572258 - 28572214
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  28572258 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 28572214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 47136974 - 47136930
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  47136974 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 47136930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 5427428 - 5427384
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| | |||||||||||||||||| ||||    
T  5427428 ttatttcttaaagttaacccggacgcaaaattttgccctagattt 5427384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 16301398 - 16301362
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgcc 396  Q
    ||||||||||||||||||| |||||||||||||||||    
T  16301398 ttatttcttaaagttaacccgaacgcaaaattttgcc 16301362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 50562514 - 50562470
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||| ||||||||||||||| ||||    
T  50562514 ttatttcttaaagttaacccgaacacaaaattttgccctatattt 50562470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 52311294 - 52311250
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||    
T  52311294 ttatttcttaaagttaacccgaacgtaaaattttgccctagattt 52311250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 360 - 399
Target Start/End: Original strand, 22198182 - 22198221
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgcccta 399  Q
    ||||||||||||||||||| |||||||||||||| |||||    
T  22198182 ttatttcttaaagttaacctgaacgcaaaattttacccta 22198221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 360 - 399
Target Start/End: Original strand, 46624303 - 46624342
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgcccta 399  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  46624303 ttatttcttaaagttaacccggacgcaaaattttgcccta 46624342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 396
Target Start/End: Original strand, 8256444 - 8256482
Alignment:
Q  358 tcttatttcttaaagttaaccagaacgcaaaattttgcc 396  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  8256444 tcttatttcttaaagttaatccgaacgcaaaattttgcc 8256482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 121
Target Start/End: Complemental strand, 50392014 - 50391972
Alignment:
Q  79 aatgtgtaaaatattggatatataagagaggtgactcatatac 121  Q
    |||||||||||| |||||||||||||| | |||||||||||||    
T  50392014 aatgtgtaaaatgttggatatataagatatgtgactcatatac 50391972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 29865543 - 29865616
Alignment:
Q  35 tgttgggtttcaagtgtgagtggttaagtctcacactatttatgaatgtgtaaaatattggatatataagagag 108  Q
    ||||| |||||||||| |||||||||||||||||| | | ||| | ||  |||||| | |||||||||||||||    
T  29865543 tgttgagtttcaagtgcgagtggttaagtctcacattgtctattactggataaaatgtgggatatataagagag 29865616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 404
Target Start/End: Original strand, 35593623 - 35593672
Alignment:
Q  355 atatcttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    |||||||||| ||||||||||| | |||||||||||||| ||||| ||||    
T  35593623 atatcttattccttaaagttaatccgaacgcaaaattttaccctagattt 35593672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 359 - 404
Target Start/End: Original strand, 50278377 - 50278422
Alignment:
Q  359 cttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||| |||||||||||| ||||||||||| |||||||| ||||    
T  50278377 cttatttattaaagttaacccgaacgcaaaatgttgccctagattt 50278422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 4892550 - 4892506
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||| |||||||||| |||| ||||    
T  4892550 ttatttcttaaagttaacccgaactcaaaattttgtcctagattt 4892506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 29185937 - 29185981
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||| |||||||||| |||| ||||    
T  29185937 ttatttcttaaagttaacccgaactcaaaattttgtcctagattt 29185981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 33362153 - 33362109
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||| |||||||||| |||| ||||    
T  33362153 ttatttcttaaagttaacccgaactcaaaattttgtcctagattt 33362109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 6e-50; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 270 - 398
Target Start/End: Original strand, 15043934 - 15044062
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  15043934 atgtgaaaatcaaagctgcgtaaaccaaaattttgcaacacagatcctaaaacactacataaaaaataacataacaactattgtaatctcttattcctta 15044033  T
Q  370 aagttaaccagaacgcaaaattttgccct 398  Q
    ||||||||| |||||||||||||||||||    
T  15044034 aagttaacctgaacgcaaaattttgccct 15044062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 6966344 - 6966478
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  6966344 atgtgaaaatcaaagctgcgtaaaccaaaattttgcaacacagagcctaaaacactacataaaaaataacataacaactattgtaatctcttattcctta 6966443  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||  |||||||||||||||||||| ||||    
T  6966444 aagttaacttgaacgcaaaattttgccctagattt 6966478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 4109991 - 4109857
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| || ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||| ||||    
T  4109991 atgtgaaaatcaaagctgtgtaaaccaaaattttgcaacacagagcctaaaacactacataaaaaataacataacaactattgtaatatcatattcctta 4109892  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||| | ||||||||||||||| |||| ||||    
T  4109891 aagttaatccgaacgcaaaattttgtcctagattt 4109857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 270 - 397
Target Start/End: Original strand, 9735803 - 9735930
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| | |||| |||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||| |||||||||||| ||||    
T  9735803 atgtgaaaatgaaagctgcgtaaaccaaaattttgcaacacagagcctaaaacactacataacaaataacataacaactattataatatcttattcctta 9735902  T
Q  370 aagttaaccagaacgcaaaattttgccc 397  Q
    |||||||||  |||||||||||||||||    
T  9735903 aagttaaccctaacgcaaaattttgccc 9735930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 1222319 - 1222185
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||  ||||||||| |||||||| ||||||||| |||||| ||||||||||||||||| ||||||||||||||||| ||||||| ||||    
T  1222319 atgtgaaaatcaaaactgcgtaaactaaaattttacaacacagagcctaaaacactacataaaaaataatataacaactattgtaatctcttattcctta 1222220  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| |||||||||||||||||||| ||||    
T  1222219 aagttaacccgaacgcaaaattttgccctagattt 1222185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 18320662 - 18320528
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||  ||||||||| |||||||| ||||||||| |||||| ||||||||||||||||| ||||||||||||||||| ||||||| ||||    
T  18320662 atgtgaaaatcaaaactgcgtaaactaaaattttacaacacagagcctaaaacactacataaaaaataatataacaactattgtaatttcttattcctta 18320563  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| |||||||||||||||||||| ||||    
T  18320562 aagttaacccgaacgcaaaattttgccctagattt 18320528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 271 - 404
Target Start/End: Complemental strand, 24447729 - 24447596
Alignment:
Q  271 tgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttcttaa 370  Q
    ||||||| |||||  ||||||||| |||||||| ||||||||| |||||| ||||||||||||||||| ||||||||||||||||| ||||||| |||||    
T  24447729 tgtgaaaatcaaaactgcgtaaactaaaattttacaacacagagcctaaaacactacataaaaaataatataacaactattgtaatctcttattccttaa 24447630  T
Q  371 agttaaccagaacgcaaaattttgccctaaattt 404  Q
    |||||||| |||||||||||||||||||| ||||    
T  24447629 agttaacccgaacgcaaaattttgccctagattt 24447596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 270 - 394
Target Start/End: Complemental strand, 14832987 - 14832863
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| | ||||||| |||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  14832987 atgtgaaaatcaaagctacgtaaactaaaattttacaacatagagcctaaagcactacataaaaaataacataacaactattgtaatctcttattcctta 14832888  T
Q  370 aagttaaccagaacgcaaaattttg 394  Q
    ||||||||| |||||||||||||||    
T  14832887 aagttaacccgaacgcaaaattttg 14832863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 289 - 404
Target Start/End: Original strand, 9978834 - 9978949
Alignment:
Q  289 gtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttcttaaagttaaccagaacgcaaa 388  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||| ||||| |||    
T  9978834 gtaaaccaaaattttgcaacacagagcctaaaacactacataaaaaataacataacaactattgtaatcttttattccttaaagttaacccgaacgaaaa 9978933  T
Q  389 attttgccctaaattt 404  Q
    ||||||||||| ||||    
T  9978934 attttgccctagattt 9978949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 270 - 393
Target Start/End: Original strand, 4896068 - 4896191
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| ||||||||||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||||| ||||| ||| ||||||| ||||    
T  4896068 atgtgaaaatcaaagttgcgtaaaccaaaaatttgcaacacagagtctaaagcaccacataaaaaataacataacaattattgcaatctcttattcctta 4896167  T
Q  370 aagttaaccagaacgcaaaatttt 393  Q
    ||||||||| |||| |||||||||    
T  4896168 aagttaacccgaacacaaaatttt 4896191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 35160058 - 35159922
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatct--tatttct 367  Q
    |||||||| |||||| |||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||| ||||||||||||| |||  |||| ||    
T  35160058 atgtgaaaatcaaagctgcgtaaaccaaaattttgcaacacagagcctaaaacacaacataaaaaataacatatcaactattgtaatctcttatattcct 35159959  T
Q  368 taaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||   | ||||||||||||||||||||||    
T  35159958 taaagttaactcaatcgcaaaattttgccctaaattt 35159922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 33319673 - 33319807
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| | ||||||||||||| ||||||||||||||||||| |||||| ||| ||||||||||||||||| ||| ||||||||| ||||||| ||||    
T  33319673 atgtgaaaattaaagttgcgtaaatcaaaattttgcaacacagagcctaaaacacaacataaaaaataacatatcaattattgtaatctcttattcctta 33319772  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||   | ||||||||||||||||| ||||    
T  33319773 aagttaactcaatcgcaaaattttgccctatattt 33319807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 4109169 - 4109125
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  4109169 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 4109125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 33320362 - 33320406
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  33320362 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 33320406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 399
Target Start/End: Original strand, 4896772 - 4896811
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgcccta 399  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  4896772 ttatttcttaaagttaacctgaacgcaaaattttgcccta 4896811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 35159302 - 35159258
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| ||||||||||||||| |||| ||||    
T  35159302 ttatttcttaaagttaacccgaacgcaaaattttgacctagattt 35159258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 1220970 - 1220926
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||| |||||||||| |||| ||||    
T  1220970 ttatttcttaaagttaacccgaactcaaaattttgtcctagattt 1220926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 398
Target Start/End: Complemental strand, 19990015 - 19989975
Alignment:
Q  358 tcttatttcttaaagttaaccagaacgcaaaattttgccct 398  Q
    ||||||| ||||||||||| | |||||||||||||||||||    
T  19990015 tcttattccttaaagttaatctgaacgcaaaattttgccct 19989975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 24446377 - 24446333
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||| |||||||||| |||| ||||    
T  24446377 ttatttcttaaagttaacccgaactcaaaattttgtcctagattt 24446333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 2951 - 3085
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||  |||    
T  2951 atgtgaaaatcaaagctgcgtaaatcaaaattttgcaacacagagcctaaaacactacataaaaaataacataacaactattgtaatctcttattcttta 3050  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| |||||||||||||||||||||||||    
T  3051 aagttaacccgaacgcaaaattttgccctaaattt 3085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 1e-48; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 42975496 - 42975630
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||| |||||||||||| ||||    
T  42975496 atgtgaaaatcaaagctgcgtaaaccaaaattttgcaacacagagcctaaaatactacataaaaaataacataacaactattataatatcttattcctta 42975595  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| |||||||||||||||||| ||||||    
T  42975596 aagttaacccgaacgcaaaattttgcccaaaattt 42975630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 270 - 397
Target Start/End: Original strand, 36884887 - 36885014
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| | |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  36884887 atgtgaaaatcaaagctacgtaaaccaaaattttgcaacacagagcctaaaacactacataaaaaataacataacaactattataatatcttattcctta 36884986  T
Q  370 aagttaaccagaacgcaaaattttgccc 397  Q
    ||||||||| ||||||||||||||||||    
T  36884987 aagttaacccgaacgcaaaattttgccc 36885014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 30181346 - 30181212
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||  |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||| ||||||| ||||    
T  30181346 atgtgaaaatcaaaactgcgtaaaccaaaattttgcaacacagagcctaaaacactgcataaaaaataacataacaactattgtaatctcttattcctta 30181247  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| |||||||||||||||||||| ||||    
T  30181246 aagttaacccgaacgcaaaattttgccctagattt 30181212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 33704862 - 33704996
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||| ||| |||||| |||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  33704862 atgtaaaagtcaaagctgcgtaaaccaaaattttgcaacagagagtctaaagcactacataaaaaataacataacaactattgtaatctcttattcctta 33704961  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| |||||||||||||||||||| ||||    
T  33704962 aagttaacccgaacgcaaaattttgccctagattt 33704996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 271 - 404
Target Start/End: Complemental strand, 41693076 - 41692943
Alignment:
Q  271 tgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttcttaa 370  Q
    ||||||| |||||  ||||||||| |||||||| ||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  41693076 tgtgaaaatcaaaactgcgtaaactaaaattttacaacacagagcctaaaacactacataaaaaataatataacaactattgtaatatcttattccttaa 41692977  T
Q  371 agttaaccagaacgcaaaattttgccctaaattt 404  Q
    |||||||| |||||||||||||||||||| ||||    
T  41692976 agttaacccgaacgcaaaattttgccctagattt 41692943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 270 - 397
Target Start/End: Original strand, 17636792 - 17636919
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||||||||||||| ||| |||||| |||||||||||||||||||| ||||||||| |||||||||||| ||||    
T  17636792 atgtgaaaatcaaagctgcgtaaaccaaaattttgcaacatagagcctaaaacactacataaaaaataacatgacaactattataatatcttattcctta 17636891  T
Q  370 aagttaaccagaacgcaaaattttgccc 397  Q
    ||||||||| ||| ||||||||||||||    
T  17636892 aagttaacccgaatgcaaaattttgccc 17636919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 271 - 404
Target Start/End: Complemental strand, 34719392 - 34719259
Alignment:
Q  271 tgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttcttaa 370  Q
    ||||||| |||||  ||||||||| |||||||| ||||||||| |||||| ||||||||||||||||| ||||||||||||||||| ||||||| |||||    
T  34719392 tgtgaaaatcaaaactgcgtaaactaaaattttacaacacagagcctaaaacactacataaaaaataatataacaactattgtaatctcttattccttaa 34719293  T
Q  371 agttaaccagaacgcaaaattttgccctaaattt 404  Q
    |||||||| |||||||||||||||||||| ||||    
T  34719292 agttaacccgaacgcaaaattttgccctagattt 34719259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 43136381 - 43136515
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||| |||||||||||||  |||||||||||||||||||||||||||| |||||||| ||| ||||||| ||||    
T  43136381 atgtgaaaatcaaagctgcgtaaaccaaaaatttgcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattcctta 43136480  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| ||| |||||||||| ||||| ||||    
T  43136481 aagttaacccgaaagcaaaatttttccctagattt 43136515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 270 - 394
Target Start/End: Original strand, 34725367 - 34725490
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| ||||| |||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||    
T  34725367 atgtgaaaatcaaagctgcgtcaaccaaaattttgcaacacagagcctaaagcactgcataaaa-ataacataacaactattgtaatatcttattcctta 34725465  T
Q  370 aagttaaccagaacgcaaaattttg 394  Q
    ||||||| | |||| ||||||||||    
T  34725466 aagttaatccgaacacaaaattttg 34725490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 752162 - 752296
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||| |||||||||||||  ||||| |||||||||||||||||||||| |||||||| ||| ||||||| ||||    
T  752162 atgtgaaaatcaaagctgcgtaaaccaaaaatttgcaacacagagtctaaaacactacataaaaaataacataataactattgcaatctcttattcctta 752261  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| ||| |||||||||| ||||| ||||    
T  752262 aagttaacccgaaagcaaaatttttccctagattt 752296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 25695645 - 25695778
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||  |||||||||||||||||| || |||| | |||||| ||||||||||||||||| ||||||||||||||||| ||||||| ||||    
T  25695645 atgtgaaaatcaaaactgcgtaaaccaaaattttaca-cacatagcctaaaacactacataaaaaataatataacaactattgtaatctcttattcctta 25695743  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| |||||||||||||||||||| ||||    
T  25695744 aagttaacccgaacgcaaaattttgccctagattt 25695778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 273 - 392
Target Start/End: Original strand, 3086543 - 3086662
Alignment:
Q  273 tgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttcttaaag 372  Q
    ||||| |||||| |||||||| |||||||||||| ||||||  ||||| |||||||||| ||||||||||||||||||| |||||||||||| |||||||    
T  3086543 tgaaaatcaaagctgcgtaaatcaaaattttgcatcacagagtctaaaacactacataacaaataacataacaactattataatatcttattccttaaag 3086642  T
Q  373 ttaaccagaacgcaaaattt 392  Q
    |||||| |||||||||||||    
T  3086643 ttaacccgaacgcaaaattt 3086662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 271 - 404
Target Start/End: Complemental strand, 2182789 - 2182654
Alignment:
Q  271 tgtgaaattcaaagttgcgtaaaccaaaattttgcaacaca-gaacctaaagcactacataaaaaa-taacataacaactattgtaatatcttatttctt 368  Q
    ||||||| | |||||| ||||||| |||||||||||||||| || |||||||||||||| |||||| ||||||||||||||||||||| ||||||| |||    
T  2182789 tgtgaaaattaaagttacgtaaactaaaattttgcaacacaagagcctaaagcactacagaaaaaaataacataacaactattgtaatctcttattcctt 2182690  T
Q  369 aaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||   |||||||||||||||||||| ||||    
T  2182689 aaagttaatatgaacgcaaaattttgccctagattt 2182654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 34714375 - 34714452
Alignment:
Q  36 gttgggtttcaagtgtgagtggttaagtctcacactatttatgaatgtgtaaaatattggatatataagagaggtgac 113  Q
    ||||||||| || |||||||||||||||| ||||  |  |||||||| ||||||||||||||||| ||||||| ||||    
T  34714375 gttgggtttaaaatgtgagtggttaagtcccacatcacatatgaatgggtaaaatattggatatagaagagagatgac 34714452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 752999 - 753043
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  752999 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 753043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 753742 - 753786
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  753742 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 753786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 43137204 - 43137248
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  43137204 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 43137248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 121
Target Start/End: Original strand, 27856160 - 27856206
Alignment:
Q  75 tatgaatgtgtaaaatattggatatataagagaggtgactcatatac 121  Q
    |||||||| ||||||| |||||||||||||||||||| |||||||||    
T  27856160 tatgaatgggtaaaatgttggatatataagagaggtggctcatatac 27856206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 2181959 - 2181915
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||    
T  2181959 ttatttcttaaagttaacccgaacgtaaaattttgccctagattt 2181915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 394
Target Start/End: Original strand, 3890316 - 3890352
Alignment:
Q  358 tcttatttcttaaagttaaccagaacgcaaaattttg 394  Q
    ||||||||||||||||||||| |||||||||||||||    
T  3890316 tcttatttcttaaagttaacccgaacgcaaaattttg 3890352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 6304736 - 6304780
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||| | |||||||||||||||||||| ||||    
T  6304736 ttatttcttaaagttaatccgaacgcaaaattttgccctagattt 6304780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 12419376 - 12419420
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||| ||||| ||||    
T  12419376 ttatttcttaaagttaacccgaacgcaaaattttaccctagattt 12419420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 405
Target Start/End: Complemental strand, 16679801 - 16679749
Alignment:
Q  353 taatatcttatttcttaaagttaaccagaacgcaaaattttgccctaaatttt 405  Q
    |||| ||||||| ||||||||||| | |||||||||||||||||||| |||||    
T  16679801 taatttcttattccttaaagttaatccgaacgcaaaattttgccctagatttt 16679749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 30180539 - 30180495
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    |||||||||||||||||||  ||||||||||||||||||| ||||    
T  30180539 ttatttcttaaagttaaccccaacgcaaaattttgccctagattt 30180495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 43137836 - 43137880
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||| ||||||||| ||||    
T  43137836 ttatttcttaaagttaacccgaacgcaaaactttgccctagattt 43137880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 16679642 - 16679591
Alignment:
Q  353 taatatcttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    |||| ||||||| |||||||||||||  ||||||||||||||||||| ||||    
T  16679642 taatctcttattccttaaagttaacccaaacgcaaaattttgccctagattt 16679591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 16683527 - 16683476
Alignment:
Q  353 taatatcttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    |||| ||||||| ||||||||||||| ||||||| |||||||||||| ||||    
T  16683527 taatctcttattccttaaagttaacccgaacgcataattttgccctagattt 16683476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 360 - 399
Target Start/End: Original strand, 42976217 - 42976256
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgcccta 399  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  42976217 ttatttcttaaagttaacccggacgcaaaattttgcccta 42976256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 398
Target Start/End: Original strand, 3087352 - 3087390
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccct 398  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  3087352 ttatttcttaaagttaacccggacgcaaaattttgccct 3087390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 121
Target Start/End: Complemental strand, 28296154 - 28296108
Alignment:
Q  75 tatgaatgtgtaaaatattggatatataagagaggtgactcatatac 121  Q
    |||||||| ||||||||||| || ||||||||||||||| |||||||    
T  28296154 tatgaatgagtaaaatattgaatgtataagagaggtgacccatatac 28296108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 396
Target Start/End: Complemental strand, 38937514 - 38937476
Alignment:
Q  358 tcttatttcttaaagttaaccagaacgcaaaattttgcc 396  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  38937514 tcttattccttaaagttaacccgaacgcaaaattttgcc 38937476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 17637624 - 17637660
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgcc 396  Q
    ||||||||||||||||||| | |||||||||||||||    
T  17637624 ttatttcttaaagttaacccggacgcaaaattttgcc 17637660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 34718040 - 34717996
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||| |||||||||| |||| ||||    
T  34718040 ttatttcttaaagttaacccgaactcaaaattttgtcctagattt 34717996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 41691724 - 41691680
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||| |||||||||| |||| ||||    
T  41691724 ttatttcttaaagttaacccgaactcaaaattttgtcctagattt 41691680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 96; Significance: 6e-47; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 270 - 397
Target Start/End: Complemental strand, 139510 - 139383
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| ||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  139510 atgtgaaaatcaaagctgcgtaaaccaaaattttgtaacacagagcctaaaacactacataaaaaataacataacaactattataatatcttattcctta 139411  T
Q  370 aagttaaccagaacgcaaaattttgccc 397  Q
    ||||||||| ||||||||||||||||||    
T  139410 aagttaacccgaacgcaaaattttgccc 139383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 270 - 351
Target Start/End: Complemental strand, 233159 - 233078
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactatt 351  Q
    |||||||| |||||| ||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  233159 atgtgaaaatcaaagctgcttaaaccaaaattttgcaacacagagtctaaagcactacataaaaaataacataacaactatt 233078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 232423 - 232379
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    |||||||||||||| |||| |||||||||||||||||||| ||||    
T  232423 ttatttcttaaagtaaacctgaacgcaaaattttgccctagattt 232379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 8282 - 8416
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||| || |||||||||||||||||    
T  8282 atgtgaaaatcaaagctgcgtaaaccaaaattttgcaacacatagcctaaaacactacataaaaaataacataacaactgttataatatcttatttctta 8381  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| ||| |||||||||||||| ||||||    
T  8382 aagttaacccgaaggcaaaattttgcccaaaattt 8416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 8986 - 9022
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgcc 396  Q
    ||||||||||||||||||| | |||||||||||||||    
T  8986 ttatttcttaaagttaacccggacgcaaaattttgcc 9022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 9e-46; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 270 - 395
Target Start/End: Original strand, 10874505 - 10874630
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  10874505 atgtgaaaatcaaagttgcgtaaaccaaaattttgcaacacagaacctaaaacactacataaaaaataacataacaactattataatatcttattcctta 10874604  T
Q  370 aagttaaccagaacgcaaaattttgc 395  Q
    |||||||||  ||| |||| ||||||    
T  10874605 aagttaacccaaacacaaatttttgc 10874630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 270 - 397
Target Start/End: Original strand, 18090718 - 18090845
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||| ||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||    
T  18090718 atgtgaaaatcaaagctgcgcaaaccaaaattttgcaatacagagcctaaagtactacataaaaaataacataacaactattgtaatctcttattcctta 18090817  T
Q  370 aagttaaccagaacgcaaaattttgccc 397  Q
    ||||||||| ||||||||||||||||||    
T  18090818 aagttaacccgaacgcaaaattttgccc 18090845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 270 - 393
Target Start/End: Complemental strand, 42782609 - 42782486
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||| |||||||||||| | ||    
T  42782609 atgtgaaaatcaaagttgcgtaaaccaaaattttgcaacacagagcctaaaacactacataacaaataacataacaactattataatatcttattccata 42782510  T
Q  370 aagttaaccagaacgcaaaatttt 393  Q
    ||||||||| ||||||||||||||    
T  42782509 aagttaacccgaacgcaaaatttt 42782486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 4289134 - 4289268
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||  ||||||||| |||||||| ||||||||| |||||| ||||||||||||||||| ||||||||||||||||| ||||||| ||||    
T  4289134 atgtgaaaatcaaaactgcgtaaactaaaattttacaacacagagcctaaaacactacataaaaaataatataacaactattgtaatctcttattcctta 4289233  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| |||||||||||||||||||| ||||    
T  4289234 aagttaacccgaacgcaaaattttgccctagattt 4289268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 271 - 393
Target Start/End: Original strand, 32675851 - 32675973
Alignment:
Q  271 tgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttcttaa 370  Q
    ||||||| ||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||    
T  32675851 tgtgaaaatcaaagttgcgtaaaccaaaaatttgcaacacagagtctaaagcactacataaaaaataacataacaattattgcaatatcttattccttaa 32675950  T
Q  371 agttaaccagaacgcaaaatttt 393  Q
    |||||||| |||| |||||||||    
T  32675951 agttaacccgaacacaaaatttt 32675973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 286 - 404
Target Start/End: Original strand, 9542752 - 9542870
Alignment:
Q  286 tgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttcttaaagttaaccagaacgc 385  Q
    |||||||||||||||||| |||||||||  ||||| ||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||| ||||||    
T  9542752 tgcgtaaaccaaaattttacaacacagagtctaaaacactacataaaaaataatataacaactattgtaatctcttattccttaaagttaacccgaacgc 9542851  T
Q  386 aaaattttgccctaaattt 404  Q
    |||||||||||||| ||||    
T  9542852 aaaattttgccctagattt 9542870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 19488212 - 19488078
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| ||| |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| ||||| |||||| ||||    
T  19488212 atgtgaaaatcaaagctgcataaaccaaaattttgcaacacagagcctaaaacaatacataaaaaataacataacaactattataatagcttattcctta 19488113  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    |||||||||  |||| |||||||||||| ||||||    
T  19488112 aagttaacccaaacgtaaaattttgcccaaaattt 19488078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 270 - 393
Target Start/End: Complemental strand, 17838409 - 17838286
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||||||||||||| |||| |||||||||||||  ||||||||||||||||||||||||||||||| ||||| | | |||||||  |||    
T  17838409 atgtgaaaatcaaagttgcgtaaacaaaaaatttgcaacacagagtctaaagcactacataaaaaataacataacaattattgcagtctcttattcgtta 17838310  T
Q  370 aagttaaccagaacgcaaaatttt 393  Q
    ||||||||| |||| |||||||||    
T  17838309 aagttaacccgaacacaaaatttt 17838286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 270 - 392
Target Start/End: Complemental strand, 6931841 - 6931720
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||||||||||||||| |   ||||| |||||||||||||||||||||||| |||| |||| ||||||| ||||    
T  6931841 atgtgaaaatcaaagctgcgtaaaccaaaattttgcaacacatagtataaagtactacataaaaaataacataacaattatt-taatctcttattcctta 6931743  T
Q  370 aagttaaccagaacgcaaaattt 392  Q
    ||||||||| ||| |||||||||    
T  6931742 aagttaacccgaatgcaaaattt 6931720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 28609888 - 28609747
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgta----atatc---tta 362  Q
    |||||||| |||||| ||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||| ||     ||||   |||    
T  28609888 atgtgaaaatcaaagctgcttaaaccaaaattttgcaacacaaagcctaaagcactacataaaaaataacataaccactattatatatcttatcttatta 28609789  T
Q  363 tttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    || ||||||||||||| |||||||||||||||||||| ||||    
T  28609788 ttccttaaagttaacccgaacgcaaaattttgccctagattt 28609747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 404
Target Start/End: Original strand, 1501514 - 1501580
Alignment:
Q  338 acataacaactattgtaatatcttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||| ||| ||||||| ||||||||||||| ||| |||||||||||||||| ||||    
T  1501514 acataacaactattgcaatctcttattccttaaagttaacccgaatgcaaaattttgccctagattt 1501580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 1501374 - 1501448
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaact 348  Q
    |||||||| |||||| ||||||||| ||||||||||||||||||  |||||||    ||||||||||||||||||||||    
T  1501374 atgtgaaaatcaaagctgcgtaaactaaaattttgcaacacagagtctaaagc----cataaaaaataacataacaact 1501448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 1513689 - 1513733
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  1513689 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 1513733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 6931244 - 6931200
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  6931244 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 6931200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 9543452 - 9543496
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  9543452 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 9543496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 121
Target Start/End: Original strand, 11615729 - 11615813
Alignment:
Q  37 ttgggtttcaagtgtgagtggttaagtctcacactatttatgaatgtgtaaaatattggatatataagagaggtgactcatatac 121  Q
    ||||||||||| |||||||||||||||||||||  | |||||||    |||||| |||||||||||| |||| |||| |||||||    
T  11615729 ttgggtttcaaatgtgagtggttaagtctcacatcacttatgaacagataaaatgttggatatataaaagagatgacacatatac 11615813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 1501622 - 1501673
Alignment:
Q  353 taatatcttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    |||| ||||||| ||||||||||||| |||||||||||||||||||| ||||    
T  1501622 taatctcttattccttaaagttaacccgaacgcaaaattttgccctagattt 1501673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 399
Target Start/End: Original strand, 32676463 - 32676502
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgcccta 399  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  32676463 ttatttcttaaagttaacctgaacgcaaaattttgcccta 32676502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 18091530 - 18091574
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| ||| |||||||||||||||| ||||    
T  18091530 ttatttcttaaagttaacccgaatgcaaaattttgccctagattt 18091574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 28609060 - 28609016
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    |||||||||||||| |||| |||||||||||||||||||| ||||    
T  28609060 ttatttcttaaagtaaacccgaacgcaaaattttgccctagattt 28609016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 8909899 - 8909848
Alignment:
Q  353 taatatcttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    |||||||||||| ||||||||||||| ||||||||||| |||| ||| ||||    
T  8909899 taatatcttattccttaaagttaacccgaacgcaaaatgttgctctagattt 8909848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 360 - 399
Target Start/End: Complemental strand, 42781786 - 42781747
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgcccta 399  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  42781786 ttatttcttaaagttaacccggacgcaaaattttgcccta 42781747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 121
Target Start/End: Complemental strand, 8252756 - 8252670
Alignment:
Q  35 tgttgggtttcaagtgtgagtggttaagtctcacactatttatgaatgtgtaaaatattggatatataagagaggtgactcatatac 121  Q
    |||||| |||||||||| |||| |||||||| |||   ||||| |||  || |||| ||||||||||||||||||| |||| |||||    
T  8252756 tgttggatttcaagtgtcagtgattaagtcttacatcgtttataaataggttaaatgttggatatataagagaggtaactcgtatac 8252670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 404
Target Start/End: Original strand, 25234472 - 25234518
Alignment:
Q  358 tcttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||| ||||||||||||| ||||||||||||||| |||| ||||    
T  25234472 tcttattccttaaagttaacctgaacgcaaaattttgtcctagattt 25234518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 404
Target Start/End: Original strand, 25234787 - 25234833
Alignment:
Q  358 tcttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    |||||||  |||||||||||| |||||||||||||||||||| ||||    
T  25234787 tcttattctttaaagttaacccgaacgcaaaattttgccctagattt 25234833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 404
Target Start/End: Original strand, 25235107 - 25235153
Alignment:
Q  358 tcttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||| ||||||||||||| ||||||||||||||| |||| ||||    
T  25235107 tcttattccttaaagttaacccgaacgcaaaattttgtcctagattt 25235153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 4290485 - 4290529
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||| |||||||||| |||| ||||    
T  4290485 ttatttcttaaagttaacccgaactcaaaattttgtcctagattt 4290529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 121
Target Start/End: Complemental strand, 31022981 - 31022898
Alignment:
Q  37 ttgggtttcaagtgtgagtggttaagtctcacactatttatgaatgtgtaaaatattggatatataagagaggtgactcatatac 121  Q
    |||||||| |||||||||||||||| |||||||   | ||||||||  |||||| ||||||||| ||||||| |||  |||||||    
T  31022981 ttgggttt-aagtgtgagtggttaaatctcacatcgtctatgaatgaataaaatgttggatatacaagagagttgaaccatatac 31022898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 26133 - 26267
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||  ||||||||| |||||||| ||||||||| |||||| ||||||||||||||||| ||||||||||||||||| ||||||| ||||    
T  26133 atgtgaaaatcaaaactgcgtaaactaaaattttacaacacagagcctaaaacactacataaaaaataatataacaactattgtaatctcttattcctta 26232  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| |||||||||||||||||||| ||||    
T  26233 aagttaacccgaacgcaaaattttgccctagattt 26267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 14583 - 14449
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||  |||||||||||||||||| ||||||||  |||||| ||||||||||||||||| ||||||||||||||||| ||||||| ||||    
T  14583 atgtgaaaatcaaaactgcgtaaaccaaaattttacaacacagtgcctaaaacactacataaaaaataatataacaactattgtaatctcttattcctta 14484  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| |||||||||||||||||||| ||||    
T  14483 aagttaacccgaacgcaaaattttgccctagattt 14449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 55494 - 55360
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||| ||| |||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||| ||||    
T  55494 atgtaaaaatcaaagctgcgtaaaccaaaattttacaacacagagcctaaagcactacataaaaaataacataacaactattgtaatataatattcctta 55395  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||| | ||||||||||||||| |||| ||||    
T  55394 aagttaatccgaacgcaaaattttgtcctagattt 55360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 11167 - 11033
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| |||||| |||||||||||||| |||||||||||||  |||||||||||||||||||||||||||| |||||||| ||| ||||||| ||||    
T  11167 atgtgaaaatcaaagctgcgtaaaccaaaaatttgcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattcctta 11068  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||| ||| |||||||||| ||||| ||||    
T  11067 aagttaacccgaaagcaaaatttttccctagattt 11033  T

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Target: scaffold0381; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 10335 - 10291
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  10335 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 10291  T

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Target: scaffold0057 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 273 - 396
Target Start/End: Original strand, 17510 - 17634
Alignment:
Q  273 tgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaa-taacataacaactattgtaatatcttatttcttaaa 371  Q
    ||||| |||||  |||||||||||||||||| ||||||||| |||||| |||||||||||||| ||| ||||||||||||||||| ||||||| ||||||    
T  17510 tgaaaatcaaaactgcgtaaaccaaaattttacaacacagagcctaaaacactacataaaaaaataatataacaactattgtaatctcttattccttaaa 17609  T
Q  372 gttaaccagaacgcaaaattttgcc 396  Q
    ||||||| |||||||||||||||||    
T  17610 gttaacccgaacgcaaaattttgcc 17634  T

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Target: scaffold0057; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 18217 - 18261
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||| |||||||||| |||| ||||    
T  18217 ttatttcttaaagttaacccgaactcaaaattttgtcctagattt 18261  T

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Target: scaffold0759 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0759
Description:

Target: scaffold0759; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 270 - 356
Target Start/End: Original strand, 3531 - 3617
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaat 356  Q
    |||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3531 atgtgaaaatcaaagctgcgtaaaccaaaattttgcaacacagagcctaaagcactacataaaaaataacataacaactattgtaat 3617  T

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Target: scaffold0115 (Bit Score: 75; Significance: 2e-34; HSPs: 3)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 14947 - 14813
Alignment:
Q  270 atgtgaaattcaaagttgcgtaaaccaaaattttgcaacacagaacctaaagcactacataaaaaataacataacaactattgtaatatcttatttctta 369  Q
    |||||||| ||||||||||||||||||||||||  ||||||| | |||| |||||||||||||||||||||||||||||||||| || ||||||| ||||    
T  14947 atgtgaaaatcaaagttgcgtaaaccaaaatttcacaacacatagcctatagcactacataaaaaataacataacaactattgttatctcttattcctta 14848  T
Q  370 aagttaaccagaacgcaaaattttgccctaaattt 404  Q
    |||||||||  |||| |||| ||| ||||| ||||    
T  14847 aagttaacccaaacgtaaaaattttccctagattt 14813  T

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Target: scaffold0115; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 3856 - 3812
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||| ||||||| |||||||||||||| ||||||||||    
T  3856 ttatttcttaaggttaacccgaacgcaaaatttttccctaaattt 3812  T

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Target: scaffold0115; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 11596 - 11552
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||| ||||||| |||||||||||||| ||||||||||    
T  11596 ttatttcttaaggttaacccgaacgcaaaatttttccctaaattt 11552  T

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Target: scaffold0542 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 8889 - 8812
Alignment:
Q  42 tttcaagtgtgagtggttaagtctcacactatttatgaatgtgtaaaatattggatatataagagaggtgactcatat 119  Q
    ||||||||||||||||||||||||||||   |||||||||| |||||||  |  ||||||||||| ||||| ||||||    
T  8889 tttcaagtgtgagtggttaagtctcacatggtttatgaatgagtaaaatgattaatatataagagtggtgattcatat 8812  T

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Target: scaffold2127 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 816 - 772
Alignment:
Q  360 ttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  816 ttatttcttaaagttaacccgaacgcaaaattttgccctagattt 772  T

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Target: scaffold0432 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 404
Target Start/End: Complemental strand, 5610 - 5564
Alignment:
Q  358 tcttatttcttaaagttaaccagaacgcaaaattttgccctaaattt 404  Q
    ||||||| ||||||||||||| ||||||||||| |||||||| ||||    
T  5610 tcttattccttaaagttaacccgaacgcaaaatattgccctagattt 5564  T

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