View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8518A_low_81 (Length: 358)
Name: NF8518A_low_81
Description: NF8518A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8518A_low_81 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 22 - 358
Target Start/End: Original strand, 7752747 - 7753083
Alignment:
| Q |
22 |
ttgtccacctcgactttagcttggacagtctcaccggcccaatccctgatttcttaggtcaactcaagaacctcgatgtcatcgacctctccgggaacag |
121 |
Q |
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| T |
7752747 |
ttgttcacctcgactttagcttggacagtctcacaggcccaatccctgatttcttaggtcaactcaagaacctcgatgtcatcgacctctctgggaacag |
7752846 |
T |
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| Q |
122 |
gtttaccggccaaatccctgcatcactaggtcgactcactaagcttagaagcgctaaccttggcccaaaccaactctccggcccaatcccagcctcctta |
221 |
Q |
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| T |
7752847 |
gtttaccggccaaatccctgcatcactaggtcgactcaccaagcttagaagcgctaaccttggctcaaaccaactctccggcccaatcccagcctcctta |
7752946 |
T |
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| Q |
222 |
ggcatgatcaagagcctagaacaactctacatatacattaacaacttatctggcccaattccagcttctttagctcaacttcctaaactcaacgaacttt |
321 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7752947 |
ggcatgatcaagagcctagaacaactctacatatacattaacaacttatctggcccaattccagcttctttagctcaacttcctaaactcaacgaacttt |
7753046 |
T |
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| Q |
322 |
ccctatttcaaaaccagctaaccggctcaatccctga |
358 |
Q |
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||||||||||||||||| ||||||||||||||||||| |
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| T |
7753047 |
ccctatttcaaaaccagttaaccggctcaatccctga |
7753083 |
T |
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