View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8518_high_7 (Length: 299)
Name: NF8518_high_7
Description: NF8518
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8518_high_7 |
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Alignment Details
Target: chr5 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 107 - 292
Target Start/End: Complemental strand, 12253801 - 12253616
Alignment:
| Q |
107 |
tgtgaagactaatctcacgagccttgtagaacttaaatgagcgacaagctctcttaagaccacatactttgtttaagctagaagacatttatcatctaat |
206 |
Q |
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| T |
12253801 |
tgtggagactaatctcacgagccttgtggaacttaaatgagcaacaaactctcttaagactacagactttggttaagctagaagacatgtatcatctaat |
12253702 |
T |
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| Q |
207 |
ctaagtgctcatgggttacttggcgcttgcttttgttttgtggtatgattttatttactaaattactaataatattgtctctgctt |
292 |
Q |
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| T |
12253701 |
ctaagtgctcatgggttgcttagcgcttgcttttgttttgtggtatgattttatttactaaattactaataatattgtctttgctt |
12253616 |
T |
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