View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8518_low_14 (Length: 253)
Name: NF8518_low_14
Description: NF8518
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8518_low_14 |
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Alignment Details
Target: chr5 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 12326062 - 12325818
Alignment:
| Q |
1 |
aagatctagtatagaaggatatagaacaaaaccttggaatttatgtttaaattcagaggtgaaactaatatgtgatggaaagctttgaagaagcattcat |
100 |
Q |
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| T |
12326062 |
aagatctagtatagaaggatatagaataaaaccttggaatttatgtttagattcagaggtgaaactaatatgtgatggaaaactttgaagaagcattcat |
12325963 |
T |
|
| Q |
101 |
tgagagagagaaaagagtgattagagaaaagatccaatttattgcaaaattgtggatatggatcaagttgatcaagtcaagacaggtccagaaacagatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
12325962 |
tgagagagagaaaagagtgattagagaaaagatccaatttattgcaaaattgtggatatggatcaagttgataaagtcaagacaggtccagaaacagatt |
12325863 |
T |
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| Q |
201 |
aattattcatcatttgtgttgccttgtatttgtaaggagaataat |
245 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12325862 |
aattattcatcatttgtgttgccttgtatttgtaaggagaataat |
12325818 |
T |
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