View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8519_high_8 (Length: 290)

Name: NF8519_high_8
Description: NF8519
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8519_high_8
NF8519_high_8
[»] chr6 (31 HSPs)
chr6 (191-282)||(27322077-27322169)
chr6 (191-273)||(27318314-27318396)
chr6 (191-278)||(8659264-8659353)
chr6 (191-278)||(8821872-8821961)
chr6 (183-266)||(3721603-3721687)
chr6 (191-266)||(3722533-3722609)
chr6 (188-278)||(8660217-8660308)
chr6 (192-278)||(8822806-8822894)
chr6 (16-79)||(18989992-18990053)
chr6 (191-267)||(7316319-7316396)
chr6 (191-267)||(16704522-16704599)
chr6 (192-267)||(7314880-7314955)
chr6 (195-278)||(34834592-34834677)
chr6 (191-267)||(6842308-6842385)
chr6 (192-239)||(16703570-16703616)
chr6 (186-248)||(378495-378557)
chr6 (209-278)||(34830920-34830990)
chr6 (195-267)||(1829628-1829701)
chr6 (191-247)||(35102490-35102547)
chr6 (190-247)||(18791605-18791664)
chr6 (183-267)||(26575079-26575162)
chr6 (181-267)||(3333051-3333138)
chr6 (191-267)||(10784591-10784669)
chr6 (205-267)||(10785938-10786000)
chr6 (195-247)||(4597408-4597461)
chr6 (191-251)||(14822359-14822420)
chr6 (191-247)||(18749096-18749153)
chr6 (191-247)||(27437827-27437884)
chr6 (96-128)||(11694242-11694274)
chr6 (200-247)||(14572186-14572234)
chr6 (180-247)||(32451714-32451782)
[»] chr4 (49 HSPs)
chr4 (189-282)||(14868887-14868980)
chr4 (189-282)||(14876954-14877047)
chr4 (180-275)||(49308044-49308139)
chr4 (191-278)||(5526139-5526227)
chr4 (192-278)||(10471401-10471489)
chr4 (191-266)||(25685848-25685924)
chr4 (188-278)||(5525356-5525447)
chr4 (194-278)||(19750588-19750673)
chr4 (194-278)||(19789133-19789218)
chr4 (191-267)||(1290223-1290300)
chr4 (191-266)||(13386013-13386090)
chr4 (189-278)||(13386545-13386637)
chr4 (191-278)||(48780247-48780336)
chr4 (192-278)||(25684934-25685022)
chr4 (186-284)||(17382987-17383086)
chr4 (190-278)||(10470544-10470634)
chr4 (191-267)||(17388236-17388312)
chr4 (191-267)||(26421647-26421723)
chr4 (191-282)||(1963195-1963288)
chr4 (189-267)||(3928883-3928962)
chr4 (189-267)||(31599786-31599865)
chr4 (190-267)||(8758862-8758940)
chr4 (181-266)||(48781072-48781157)
chr4 (191-267)||(1835127-1835204)
chr4 (195-267)||(12129626-12129699)
chr4 (191-267)||(8757674-8757750)
chr4 (191-267)||(13509384-13509460)
chr4 (192-267)||(31601010-31601086)
chr4 (192-278)||(10447006-10447095)
chr4 (191-267)||(49306774-49306850)
chr4 (189-247)||(25011982-25012041)
chr4 (181-247)||(47869901-47869968)
chr4 (97-131)||(1688188-1688222)
chr4 (192-278)||(1834119-1834208)
chr4 (190-267)||(3927664-3927742)
chr4 (195-267)||(8155741-8155813)
chr4 (189-244)||(15058817-15058873)
chr4 (195-251)||(35934347-35934402)
chr4 (195-247)||(4357499-4357552)
chr4 (191-247)||(13826419-13826476)
chr4 (195-267)||(35935558-35935631)
chr4 (191-247)||(43793630-43793687)
chr4 (191-267)||(52491632-52491709)
chr4 (192-267)||(1964466-1964542)
chr4 (192-247)||(13394536-13394592)
chr4 (192-247)||(13397675-13397731)
chr4 (184-247)||(13397923-13397987)
chr4 (191-267)||(21177996-21178072)
chr4 (195-267)||(37728590-37728662)
[»] chr3 (59 HSPs)
chr3 (191-282)||(5029692-5029784)
chr3 (181-273)||(5001189-5001282)
chr3 (183-278)||(47610593-47610690)
chr3 (192-278)||(51469972-51470060)
chr3 (182-267)||(12703525-12703610)
chr3 (191-278)||(47609696-47609785)
chr3 (191-267)||(12700174-12700249)
chr3 (181-282)||(22776821-22776924)
chr3 (191-266)||(51470481-51470556)
chr3 (195-267)||(7267647-7267719)
chr3 (192-267)||(47614185-47614261)
chr3 (181-267)||(29932724-29932810)
chr3 (181-267)||(29981878-29981964)
chr3 (189-267)||(54540815-54540894)
chr3 (191-267)||(7758401-7758478)
chr3 (191-267)||(19984848-19984925)
chr3 (186-267)||(28262187-28262268)
chr3 (191-267)||(29931225-29931302)
chr3 (191-267)||(29980379-29980456)
chr3 (195-251)||(7268868-7268924)
chr3 (184-267)||(8456470-8456553)
chr3 (191-249)||(47615591-47615650)
chr3 (191-267)||(52281572-52281649)
chr3 (190-267)||(55192020-55192097)
chr3 (184-247)||(3328805-3328869)
chr3 (192-267)||(52840629-52840705)
chr3 (190-267)||(24516458-24516536)
chr3 (190-267)||(54539753-54539831)
chr3 (191-248)||(11671385-11671442)
chr3 (191-247)||(22447739-22447796)
chr3 (191-267)||(52276303-52276380)
chr3 (192-278)||(535795-535883)
chr3 (192-247)||(27852753-27852809)
chr3 (189-272)||(52839034-52839118)
chr3 (192-282)||(51037536-51037627)
chr3 (192-267)||(18456088-18456165)
chr3 (189-247)||(20001956-20002014)
chr3 (199-245)||(22775783-22775829)
chr3 (191-267)||(534498-534575)
chr3 (191-247)||(22500595-22500652)
chr3 (191-247)||(26628024-26628081)
chr3 (191-247)||(28173728-28173785)
chr3 (191-267)||(28263136-28263213)
chr3 (192-247)||(8338940-8338996)
chr3 (192-247)||(28154882-28154938)
chr3 (184-267)||(51038815-51038899)
chr3 (188-267)||(18442626-18442707)
chr3 (188-267)||(19487700-19487781)
chr3 (191-244)||(19986120-19986174)
chr3 (191-244)||(25179826-25179880)
chr3 (191-244)||(32960644-32960698)
chr3 (190-267)||(46721245-46721323)
chr3 (192-265)||(49216247-49216321)
chr3 (191-247)||(13081142-13081199)
chr3 (218-267)||(31645000-31645049)
chr3 (191-247)||(34878528-34878585)
chr3 (191-247)||(46673044-46673101)
chr3 (176-247)||(4775834-4775906)
chr3 (192-267)||(46719941-46720017)
[»] chr7 (36 HSPs)
chr7 (191-265)||(34174010-34174084)
chr7 (191-278)||(127336-127423)
chr7 (191-278)||(17782566-17782655)
chr7 (191-266)||(3227620-3227696)
chr7 (193-266)||(3227109-3227182)
chr7 (191-278)||(31949321-31949410)
chr7 (194-278)||(17781663-17781749)
chr7 (191-267)||(7501877-7501954)
chr7 (191-266)||(31949828-31949904)
chr7 (192-278)||(47525380-47525468)
chr7 (199-265)||(47524532-47524599)
chr7 (192-267)||(18371424-18371500)
chr7 (189-278)||(128614-128705)
chr7 (181-247)||(8527042-8527109)
chr7 (191-267)||(22630477-22630554)
chr7 (189-267)||(7500452-7500530)
chr7 (205-267)||(18372482-18372544)
chr7 (192-267)||(31659622-31659699)
chr7 (183-247)||(20636866-20636931)
chr7 (184-263)||(20163585-20163665)
chr7 (185-267)||(11658372-11658455)
chr7 (197-267)||(14999180-14999249)
chr7 (190-247)||(27869194-27869252)
chr7 (190-247)||(42271580-42271638)
chr7 (195-267)||(42886311-42886384)
chr7 (191-267)||(21505415-21505490)
chr7 (192-247)||(36746751-36746806)
chr7 (190-247)||(3562431-3562489)
chr7 (190-247)||(19195212-19195270)
chr7 (191-244)||(21690415-21690469)
chr7 (191-249)||(14998007-14998067)
chr7 (191-247)||(24597516-24597573)
chr7 (183-267)||(47369772-47369857)
chr7 (191-246)||(5490924-5490980)
chr7 (191-247)||(21224353-21224409)
chr7 (184-247)||(39182181-39182245)
[»] chr1 (41 HSPs)
chr1 (181-278)||(52827336-52827435)
chr1 (130-191)||(26371972-26372033)
chr1 (192-278)||(41364829-41364916)
chr1 (184-278)||(41366144-41366239)
chr1 (195-273)||(45149990-45150068)
chr1 (191-267)||(14999284-14999360)
chr1 (188-267)||(45157234-45157313)
chr1 (195-284)||(7983053-7983143)
chr1 (190-267)||(52274966-52275044)
chr1 (195-278)||(52828083-52828168)
chr1 (192-267)||(39699792-39699867)
chr1 (190-267)||(24426100-24426178)
chr1 (191-267)||(24422799-24422876)
chr1 (183-276)||(35594208-35594301)
chr1 (191-267)||(11437224-11437301)
chr1 (191-267)||(23980491-23980568)
chr1 (191-267)||(7674527-7674602)
chr1 (192-267)||(36613929-36614005)
chr1 (195-267)||(43058789-43058861)
chr1 (192-278)||(45148581-45148668)
chr1 (184-278)||(37526891-37526986)
chr1 (192-264)||(39222501-39222575)
chr1 (177-251)||(50680319-50680391)
chr1 (181-267)||(51684355-51684442)
chr1 (190-247)||(4059520-4059578)
chr1 (182-267)||(11436032-11436118)
chr1 (184-252)||(39698555-39698624)
chr1 (191-267)||(51685790-51685867)
chr1 (189-267)||(33088642-33088721)
chr1 (189-267)||(39153141-39153220)
chr1 (191-267)||(35067027-35067104)
chr1 (191-247)||(46432215-46432272)
chr1 (190-244)||(24750020-24750075)
chr1 (188-267)||(43378738-43378817)
chr1 (189-267)||(44404439-44404518)
chr1 (193-247)||(48471864-48471919)
chr1 (205-267)||(39151945-39152007)
chr1 (191-247)||(51719122-51719179)
chr1 (189-252)||(14999995-15000059)
chr1 (192-247)||(24962201-24962257)
chr1 (195-258)||(52276197-52276261)
[»] chr5 (36 HSPs)
chr5 (189-267)||(19752909-19752987)
chr5 (191-278)||(5778849-5778938)
chr5 (191-278)||(5777900-5777987)
chr5 (191-266)||(5730440-5730517)
chr5 (186-267)||(18485132-18485214)
chr5 (180-276)||(22940638-22940738)
chr5 (191-267)||(25523068-25523145)
chr5 (16-79)||(23915469-23915530)
chr5 (181-267)||(28539845-28539931)
chr5 (191-267)||(18486927-18487004)
chr5 (191-267)||(19754155-19754233)
chr5 (190-267)||(36486513-36486591)
chr5 (192-284)||(20214196-20214289)
chr5 (191-267)||(28538675-28538752)
chr5 (192-267)||(25056406-25056482)
chr5 (220-266)||(5730888-5730934)
chr5 (190-267)||(33158096-33158174)
chr5 (191-267)||(16650880-16650957)
chr5 (191-247)||(18695250-18695307)
chr5 (190-247)||(25556875-25556932)
chr5 (191-251)||(33160327-33160388)
chr5 (189-267)||(24332910-24332989)
chr5 (191-267)||(25524152-25524230)
chr5 (191-244)||(23765419-23765473)
chr5 (191-244)||(23815267-23815321)
chr5 (191-247)||(31055314-31055371)
chr5 (184-282)||(1015476-1015576)
chr5 (188-247)||(24025017-24025077)
chr5 (181-267)||(21835030-21835116)
chr5 (182-267)||(40255697-40255783)
chr5 (195-267)||(20216788-20216861)
chr5 (191-267)||(25055411-25055488)
chr5 (212-265)||(34893686-34893739)
chr5 (195-247)||(40428642-40428695)
chr5 (180-247)||(245842-245910)
chr5 (195-267)||(42195137-42195208)
[»] chr2 (36 HSPs)
chr2 (183-282)||(36449769-36449870)
chr2 (192-278)||(1034482-1034570)
chr2 (181-267)||(38840518-38840605)
chr2 (191-278)||(18906001-18906089)
chr2 (188-267)||(802616-802695)
chr2 (190-267)||(22848189-22848267)
chr2 (191-267)||(7899907-7899984)
chr2 (191-267)||(18904366-18904443)
chr2 (189-267)||(11258836-11258915)
chr2 (195-278)||(28617926-28618009)
chr2 (195-266)||(36450947-36451018)
chr2 (191-282)||(11938798-11938890)
chr2 (191-267)||(18868923-18869000)
chr2 (184-267)||(18300749-18300831)
chr2 (191-267)||(18797245-18797323)
chr2 (190-249)||(21837298-21837356)
chr2 (191-267)||(23869560-23869636)
chr2 (191-267)||(41879237-41879314)
chr2 (193-257)||(1033212-1033275)
chr2 (192-267)||(18299373-18299449)
chr2 (184-267)||(32739615-32739699)
chr2 (192-267)||(41878092-41878170)
chr2 (193-267)||(13030293-13030365)
chr2 (190-267)||(13567970-13568048)
chr2 (190-267)||(22587979-22588056)
chr2 (190-267)||(24475223-24475300)
chr2 (191-247)||(30714274-30714331)
chr2 (191-267)||(38839241-38839318)
chr2 (192-247)||(9787805-9787861)
chr2 (192-267)||(24476869-24476943)
chr2 (186-247)||(2986934-2986996)
chr2 (195-251)||(7898694-7898751)
chr2 (219-267)||(810806-810854)
chr2 (181-221)||(20347489-20347529)
chr2 (192-244)||(21837070-21837121)
chr2 (192-247)||(38716440-38716496)
[»] chr8 (46 HSPs)
chr8 (16-79)||(30338459-30338522)
chr8 (185-252)||(12353400-12353467)
chr8 (191-273)||(5513981-5514063)
chr8 (192-267)||(10006344-10006420)
chr8 (201-267)||(18970920-18970986)
chr8 (201-267)||(18978029-18978095)
chr8 (191-267)||(10007788-10007865)
chr8 (187-267)||(22221389-22221470)
chr8 (187-267)||(22227731-22227812)
chr8 (195-265)||(29968364-29968434)
chr8 (181-267)||(32207350-32207435)
chr8 (190-278)||(5003111-5003199)
chr8 (209-278)||(24488693-24488762)
chr8 (191-267)||(24122882-24122958)
chr8 (184-267)||(38980069-38980153)
chr8 (184-267)||(39011166-39011250)
chr8 (197-267)||(1824103-1824174)
chr8 (197-267)||(1858548-1858619)
chr8 (193-267)||(18979145-18979220)
chr8 (190-267)||(12351919-12351997)
chr8 (195-282)||(11287779-11287868)
chr8 (192-248)||(24483143-24483200)
chr8 (191-267)||(32968455-32968532)
chr8 (187-266)||(1823547-1823627)
chr8 (187-266)||(1857992-1858072)
chr8 (191-247)||(19391387-19391443)
chr8 (192-267)||(32973961-32974037)
chr8 (192-267)||(38974795-38974871)
chr8 (192-267)||(39005893-39005969)
chr8 (190-247)||(5192270-5192328)
chr8 (191-247)||(4518868-4518925)
chr8 (191-247)||(4807599-4807656)
chr8 (190-267)||(8388462-8388538)
chr8 (191-247)||(11456637-11456694)
chr8 (192-257)||(23170034-23170098)
chr8 (191-247)||(44147218-44147275)
chr8 (192-244)||(3819489-3819541)
chr8 (191-249)||(11288902-11288962)
chr8 (192-267)||(22220388-22220464)
chr8 (189-240)||(45114568-45114620)
chr8 (96-127)||(30338410-30338441)
chr8 (190-267)||(30335637-30335715)
chr8 (191-267)||(24123923-24123997)
chr8 (191-247)||(33895621-33895678)
chr8 (187-247)||(36249547-36249608)
chr8 (191-267)||(5514295-5514371)
[»] scaffold0302 (2 HSPs)
scaffold0302 (191-284)||(17469-17564)
scaffold0302 (192-267)||(18801-18877)
[»] scaffold0294 (2 HSPs)
scaffold0294 (191-274)||(5456-5540)
scaffold0294 (191-273)||(4441-4524)
[»] scaffold0186 (2 HSPs)
scaffold0186 (192-264)||(23081-23152)
scaffold0186 (191-275)||(23907-23992)
[»] scaffold0320 (1 HSPs)
scaffold0320 (191-267)||(19487-19564)
[»] scaffold0632 (1 HSPs)
scaffold0632 (191-267)||(3333-3409)
[»] scaffold0419 (1 HSPs)
scaffold0419 (192-247)||(2961-3017)
[»] scaffold0227 (1 HSPs)
scaffold0227 (192-267)||(144-220)
[»] scaffold0112 (1 HSPs)
scaffold0112 (192-267)||(37148-37223)
[»] scaffold0019 (2 HSPs)
scaffold0019 (184-267)||(61484-61568)
scaffold0019 (192-267)||(60090-60166)
[»] scaffold0369 (1 HSPs)
scaffold0369 (180-267)||(13181-13267)
[»] scaffold0093 (2 HSPs)
scaffold0093 (193-267)||(2490-2564)
scaffold0093 (193-267)||(7113-7187)
[»] scaffold0607 (1 HSPs)
scaffold0607 (190-247)||(2046-2104)
[»] scaffold0059 (2 HSPs)
scaffold0059 (193-267)||(4755-4829)
scaffold0059 (211-251)||(3695-3735)
[»] scaffold2034 (1 HSPs)
scaffold2034 (192-267)||(233-309)
[»] scaffold0045 (1 HSPs)
scaffold0045 (192-267)||(49109-49185)
[»] scaffold0025 (1 HSPs)
scaffold0025 (189-244)||(62069-62125)
[»] scaffold0060 (1 HSPs)
scaffold0060 (190-244)||(66424-66479)
[»] scaffold1303 (1 HSPs)
scaffold1303 (191-247)||(1438-1495)
[»] scaffold0179 (1 HSPs)
scaffold0179 (191-247)||(5649-5706)
[»] scaffold0024 (1 HSPs)
scaffold0024 (183-247)||(43815-43880)
[»] scaffold0003 (1 HSPs)
scaffold0003 (191-247)||(49478-49535)
[»] scaffold0049 (1 HSPs)
scaffold0049 (181-213)||(7495-7527)


Alignment Details
Target: chr6 (Bit Score: 85; Significance: 1e-40; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 191 - 282
Target Start/End: Complemental strand, 27322169 - 27322077
Alignment:
Q  191 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcc-cccctaagaatta 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  27322169 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttccccccctaagaatta 27322077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 191 - 273
Target Start/End: Original strand, 27318314 - 27318396
Alignment:
Q  191 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccc 273  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27318314 aggctaaagtgcaccttttccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttccccccc 27318396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 191 - 278
Target Start/End: Original strand, 8659264 - 8659353
Alignment:
Q  191 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaaga 278  Q
    ||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  8659264 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaaga 8659353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 191 - 278
Target Start/End: Original strand, 8821872 - 8821961
Alignment:
Q  191 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaaga 278  Q
    ||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  8821872 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaaga 8821961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 266
Target Start/End: Original strand, 3721603 - 3721687
Alignment:
Q  183 taaaataaaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 266  Q
    ||||| ||||||||||||||||||||||||| ||| ||||||||| |||||||||||| |||||||||||||||||||| |||||    
T  3721603 taaaacaaaggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccataattt 3721687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 191 - 266
Target Start/End: Complemental strand, 3722609 - 3722533
Alignment:
Q  191 aggctaaagtgcacttttccc-ccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 266  Q
    ||||||||||||||||||||| ||||| ||||||||| |||||||||||| ||| ||||||||||||||||||||||    
T  3722609 aggctaaagtgcacttttccctccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaattt 3722533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 188 - 278
Target Start/End: Complemental strand, 8660308 - 8660217
Alignment:
Q  188 taaaggctaaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaaga 278  Q
    ||||||||||||||||||||||||| |||| ||||||||| |||||||||||| |||| |||||||||||||||||||||  |||||||||||    
T  8660308 taaaggctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttgacccc-taagtaccaaaaccacaatttagcccccctaaga 8660217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 278
Target Start/End: Complemental strand, 8822894 - 8822806
Alignment:
Q  192 ggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaaga 278  Q
    |||||||||||||||||||| | | | ||||||||| |||||||||||| ||||||||||||||||||||||||||  |||||||||||    
T  8822894 ggctaaagtgcacttttccctctttaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaaga 8822806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 18989992 - 18990053
Alignment:
Q  16 cttctccatatatataggggaaagacttccaattaccaattgacgaaaatacccctataagggc 79  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||    
T  18989992 cttctccatatatat--gggaaagacttccaattaccaattgacgaaaatacccttataagggc 18990053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 7316396 - 7316319
Alignment:
Q  191 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||| ||   |||||||||||||    
T  7316396 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaaatattgaaaccacaatttt 7316319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 16704599 - 16704522
Alignment:
Q  191 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||||| |||| | ||||||||| |||||||||||| |||||||||||| ||||| ||||||||    
T  16704599 aggctaaagtgcacttttcctcccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttt 16704522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 7314880 - 7314955
Alignment:
Q  192 ggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||||| |||||| ||||||||    
T  7314880 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgg-cccctaagtatcaaaacaacaatttt 7314955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 195 - 278
Target Start/End: Complemental strand, 34834677 - 34834592
Alignment:
Q  195 taaagtgcacttttccc-ccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaaga 278  Q
    ||||||||||||||||| ||||| ||||||||| ||||||||||||  | |||||||| ||||||||||||||  |||||||||||    
T  34834677 taaagtgcacttttccctccctaactttcaaaaacttgcaattttgatctcctaagtatcaaaaccacaatttagcccccctaaga 34834592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 6842385 - 6842308
Alignment:
Q  191 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||||| |||  ||||||||  ||||||||||||||||||| || | ||||| ||||||||    
T  6842385 aggctaaagtgcacttttccccctctaagtttcaaaaagttgcaattttggccccctatgtgcaaaaactacaatttt 6842308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 239
Target Start/End: Original strand, 16703570 - 16703616
Alignment:
Q  192 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttg 239  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  16703570 ggctaaagtgcacttttcccc-ctatctttcaaaaacttgcaattttg 16703616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 248
Target Start/End: Complemental strand, 378557 - 378495
Alignment:
Q  186 aataaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaa 248  Q
    |||||||||| || |||||||||  |||||||||||| |||| |||| |||||||||||||||    
T  378557 aataaaggcttaattgcacttttgacccctatctttccaaatgttgcgattttggccccctaa 378495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 278
Target Start/End: Original strand, 34830920 - 34830990
Alignment:
Q  209 cccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaaga 278  Q
    |||||| | |||||||||  |||||  |||||||||||||||||||||||||||||||  |||||||||||    
T  34830920 ccccccgaactttcaaaaatttgcatatttggccccctaagtaccaaaaccacaatttagcccccctaaga 34830990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 1829701 - 1829628
Alignment:
Q  195 taaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||  ||||||| |||| |||| |||||||||||| |||||||||||  ||||| ||||||||    
T  1829701 taaagtgcacttttttccccctaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaatttt 1829628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 35102490 - 35102547
Alignment:
Q  191 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||||||||||||||| |||||||| ||||||||| |||| ||||| ||||||||    
T  35102490 aggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttagcccccta 35102547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 18791664 - 18791605
Alignment:
Q  190 aaggctaaagtgcacttttc--ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||||||||||||||||  |||||||| ||| ||||| |||| ||||||||||||||    
T  18791664 aaggctaaagtgcacttttcgtccccctatgttttaaaatgttgcgattttggcccccta 18791605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 267
Target Start/End: Complemental strand, 26575162 - 26575079
Alignment:
Q  183 taaaataaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||  ||||||||||||| || | ||| ||||||||| |||||||||||  |||| ||||||| ||||| ||||||||    
T  26575162 taaaataaagattaaagtgcacttt-cctctctaactttcaaaaacttgcaattttaaccccttaagtacaaaaactacaatttt 26575079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 3333138 - 3333051
Alignment:
Q  181 aataaaataaaggctaaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||| ||||||||||| |||||||||||||  |||  ||| ||||  |||| |||||||||||||| |||| ||||| ||||||||    
T  3333138 aataaagtaaaggctaaattgcacttttccccttctaagtttgaaaaagttgcgattttggccccctatgtacaaaaactacaatttt 3333051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 10784591 - 10784669
Alignment:
Q  191 aggctaaagtgcacttttcccccc--tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||| ||  || |||| |||| |||||||||||  |||||||||||  ||||| ||||||||    
T  10784591 aggctaaagtgcacttttccctcccttaacttttaaaaacttgcaattttaaccccctaagtataaaaactacaatttt 10784669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 267
Target Start/End: Complemental strand, 10786000 - 10785938
Alignment:
Q  205 ttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||| |||| ||||  ||||||||||  |||||||||||| ||||| ||||||||    
T  10786000 ttttcccccctaacttttaaaaatttgcaattttaaccccctaagtacaaaaactacaatttt 10785938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 4597408 - 4597461
Alignment:
Q  195 taaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||||||||||| |||||||| ||||||||| |||| ||||||| ||||||    
T  4597408 taaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggtccccta 4597461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 14822359 - 14822420
Alignment:
Q  191 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagta 251  Q
    |||||| |||||||||||| ||||| |  |||||||| ||||||||||||||||| ||||||    
T  14822359 aggctagagtgcacttttcaccccttaattttcaaaaacttgcaattttggccccataagta 14822420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 18749096 - 18749153
Alignment:
Q  191 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggcccccta 247  Q
    |||||||| |||||||||| ||||| || ||| ||||| |||||||||||||||||||    
T  18749096 aggctaaactgcacttttcgccccttatgttttaaaatgttgcaattttggcccccta 18749153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 27437827 - 27437884
Alignment:
Q  191 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||||||||||||||| |||| || |||| ||||  |||||||||||||||||||    
T  27437827 aggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggcccccta 27437884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 128
Target Start/End: Original strand, 11694242 - 11694274
Alignment:
Q  96 tggacatggattgtcctatatagtttagtagaa 128  Q
    ||||||| |||||||||||||||||||||||||    
T  11694242 tggacattgattgtcctatatagtttagtagaa 11694274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 247
Target Start/End: Original strand, 14572186 - 14572234
Alignment:
Q  200 tgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||||||||| |||||||| ||| ||||| |||||||||||||||||||    
T  14572186 tgcacttttcgccccctatgttttaaaatgttgcaattttggcccccta 14572234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 247
Target Start/End: Original strand, 32451714 - 32451782
Alignment:
Q  180 aaataaaataaaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||||||||||||||| | |||||||| ||| |||  ||||||||| |||  ||||||||||||||    
T  32451714 aaataaaataaaggctaaacttcacttttcgccctctaagtttcaaaatgttgtgattttggcccccta 32451782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 9e-39; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 189 - 282
Target Start/End: Original strand, 14868887 - 14868980
Alignment:
Q  189 aaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccctaagaatta 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||    
T  14868887 aaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaatttccccccctaagaatta 14868980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 189 - 282
Target Start/End: Complemental strand, 14877047 - 14876954
Alignment:
Q  189 aaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccctaagaatta 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||    
T  14877047 aaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaatttccccccctaagaatta 14876954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 180 - 275
Target Start/End: Complemental strand, 49308139 - 49308044
Alignment:
Q  180 aaataaaataaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttccccccta 275  Q
    |||||||| | |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||| |||||||| |||||||    
T  49308139 aaataaaaaataggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgcccccta 49308044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 191 - 278
Target Start/End: Complemental strand, 5526227 - 5526139
Alignment:
Q  191 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaaga 278  Q
    |||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||| ||||||||||||||  |||||||||||    
T  5526227 aggctaaagtgcacttttcccctctaactttcaaaaacttgcaattttggccccctaagtaacaaaaccacaatttagcccccctaaga 5526139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 192 - 278
Target Start/End: Complemental strand, 10471489 - 10471401
Alignment:
Q  192 ggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaaga 278  Q
    |||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  10471489 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaaga 10471401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 191 - 266
Target Start/End: Complemental strand, 25685924 - 25685848
Alignment:
Q  191 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 266  Q
    ||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25685924 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 25685848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 188 - 278
Target Start/End: Original strand, 5525356 - 5525447
Alignment:
Q  188 taaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaaga 278  Q
    ||||||||||||| || |||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||  |||||||||||    
T  5525356 taaaggctaaagtacatttttcccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaaga 5525447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 19750673 - 19750588
Alignment:
Q  194 ctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaaga 278  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||| ||||| |||||||| |||||||||||    
T  19750673 ctaaagtgcacttttcccccctaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttacccccctaaga 19750588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 19789133 - 19789218
Alignment:
Q  194 ctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaaga 278  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||| ||||| |||||||| |||||||||||    
T  19789133 ctaaagtgcacttttcccccctaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttacccccctaaga 19789218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 1290300 - 1290223
Alignment:
Q  191 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  1290300 aggctaaagtgcacttttccccccttaactttcaaaatcttgcaattttggccctctaagtacaaaaactacaatttt 1290223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 266
Target Start/End: Original strand, 13386013 - 13386090
Alignment:
Q  191 aggctaaagtgcacttttccccc-ctatctttcaaaat-cttgcaattttggccccctaagtaccaaaaccacaattt 266  Q
    ||||||||||||||||||||||| ||| |||||||||  |||||||||||||||||||||||||||||||||||||||    
T  13386013 aggctaaagtgcacttttccccctctaactttcaaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 13386090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 13386637 - 13386545
Alignment:
Q  189 aaaggctaaagtgcactttt--cccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaaga 278  Q
    ||||||||||||||||||||  |||||||| ||||||||| |||||||||||| |||| |||||||||||||||||||||  |||||||||||    
T  13386637 aaaggctaaagtgcactttttccccccctaactttcaaaaacttgcaattttgaccccataagtaccaaaaccacaatttagcccccctaaga 13386545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 278
Target Start/End: Original strand, 48780247 - 48780336
Alignment:
Q  191 aggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaaga 278  Q
    |||||||||||||||||||||||| || |||| |||| |||||||||||| ||||||||||||||||||||||||||  |||||||||||    
T  48780247 aggctaaagtgcacttttccccccctaacttttaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaaga 48780336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 192 - 278
Target Start/End: Original strand, 25684934 - 25685022
Alignment:
Q  192 ggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaaga 278  Q
    ||||||||||||||||||||||| || ||||||||| |||||||||||| ||| ||||||||||||||||||||||  |||||||||||    
T  25684934 ggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaatttagcccccctaaga 25685022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 186 - 284
Target Start/End: Original strand, 17382987 - 17383086
Alignment:
Q  186 aataaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattatc 284  Q
    |||| ||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||| ||||||| ||||| ||||||||  ||||| ||||||||||    
T  17382987 aatataggctaaagtgcacttttctcccctaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccccccaagaattatc 17383086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 278
Target Start/End: Original strand, 10470544 - 10470634
Alignment:
Q  190 aaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaaga 278  Q
    |||||||||||||||||||||||||| | ||||||||| |||||||||||| ||| ||||||||||||| ||||||||  |||||||||||    
T  10470544 aaggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccctctaagtaccaaaatcacaatttagcccccctaaga 10470634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 17388312 - 17388236
Alignment:
Q  191 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||| ||| |||||||  |||| ||||||||    
T  17388312 aggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggtcccttaagtacataaactacaatttt 17388236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 26421723 - 26421647
Alignment:
Q  191 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||||||| ||| ||||||||| |||||||||||| || ||||||||| ||||| ||||||||    
T  26421723 aggctaaagtgcacttttcccctctaactttcaaaaacttgcaattttgacctcctaagtacaaaaactacaatttt 26421647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 282
Target Start/End: Original strand, 1963195 - 1963288
Alignment:
Q  191 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaatta 282  Q
    ||||||||||||||||||||||||| | |||||||||  |||||||||||||| |||| |||| ||||| ||||||||  ||||||||||||||    
T  1963195 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttggcctcctatgtacaaaaactacaattttagccccctaagaatta 1963288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 267
Target Start/End: Complemental strand, 3928962 - 3928883
Alignment:
Q  189 aaaggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||||||||||| || |||||||||  |||| |||||||||||||| |||  ||||||||||||||    
T  3928962 aaaggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccctatgtatgaaaaccacaatttt 3928883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 267
Target Start/End: Original strand, 31599786 - 31599865
Alignment:
Q  189 aaaggctaaagtgcactttt-cccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||| |||||||||||| |||||||| |||| |||| |||||||||||| |||||||||||| ||||| ||||||||    
T  31599786 aaaggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaatttt 31599865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 267
Target Start/End: Complemental strand, 8758940 - 8758862
Alignment:
Q  190 aaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||| |||| |||||||||||||||| | ||||||||| |||||||||||||||||||||||||  |||| ||||||||    
T  8758940 aaggttaaaatgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaatttt 8758862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 266
Target Start/End: Complemental strand, 48781157 - 48781072
Alignment:
Q  181 aataaaataaaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 266  Q
    ||||| || |||||||||||||||||||||||| ||| |||||||||  ||||||||||||  |||||||||| |||||||||||||    
T  48781157 aataatatgaaggctaaagtgcacttttccccctctaactttcaaaaatttgcaattttgg-tccctaagtactaaaaccacaattt 48781072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 1835204 - 1835127
Alignment:
Q  191 aggctaaagtgcacttttccc-ccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||  ||||| ||||||||| |||||||||||| |||||||||||  ||||| ||||||||    
T  1835204 aggctaaagtgcacttttccatccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaatttt 1835127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 12129626 - 12129699
Alignment:
Q  195 taaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||| || | ||||||||| ||||||||||||||||| ||||||| ||||| ||||||||    
T  12129626 taaagtgcacttttcccctcttaactttcaaaaacttgcaattttggccccgtaagtacaaaaactacaatttt 12129699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 8757674 - 8757750
Alignment:
Q  191 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||| |||| || ||||||||| ||| ||||||| |||||||||||||  |||| ||||||||    
T  8757674 aggctaaagtgcactttttccccttaactttcaaaaacttacaattttagccccctaagtacagaaactacaatttt 8757750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 13509460 - 13509384
Alignment:
Q  191 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||| |||||||||||||| |||| ||||  ||||||||||||||||| |||||  ||||| ||||||||    
T  13509460 aggctaaagtgtacttttcccccctaacttttaaaaaattgcaattttggccccccaagtatgaaaactacaatttt 13509384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 31601086 - 31601010
Alignment:
Q  192 ggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||| |||| ||| |||| |||| |||||||||||| |||||||||||| ||||| ||||||||    
T  31601086 ggctaaagtgcactttttcccctctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaatttt 31601010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 278
Target Start/End: Original strand, 10447006 - 10447095
Alignment:
Q  192 ggctaaagtgcacttttcccccc--tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaaga 278  Q
    ||||||||||||||||||||||   ||  ||||||||  |||||||||| |||||||| |||| |||||||||||||| |||||||||||    
T  10447006 ggctaaagtgcacttttccccctcttaagtttcaaaaagttgcaattttagccccctatgtacaaaaaccacaattttacccccctaaga 10447095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 49306774 - 49306850
Alignment:
Q  191 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||  |||| | ||||||||| |||||||||||||||   ||||||| ||||| ||||||||    
T  49306774 aggctaaagtgcacttttttcccccaactttcaaaaacttgcaattttggccatttaagtacaaaaactacaatttt 49306850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 25012041 - 25011982
Alignment:
Q  189 aaaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||||||||| |||||||||| |||||||| ||||| ||| |||||||||||||||||||    
T  25012041 aaaggctaaactgcacttttcgccccctatgtttcataatgttgcaattttggcccccta 25011982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 247
Target Start/End: Complemental strand, 47869968 - 47869901
Alignment:
Q  181 aataaaataaaggctaaagtgc-acttttcccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||||||||||||||||||||| | |||| |||||||| ||||||||| |||  ||||||||||||||    
T  47869968 aataaaataaaggctaaagtgcaatttttgccccctatatttcaaaatgttgtgattttggcccccta 47869901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 131
Target Start/End: Complemental strand, 1688222 - 1688188
Alignment:
Q  97 ggacatggattgtcctatatagtttagtagaagac 131  Q
    |||||||||||||||||||||||||||||||||||    
T  1688222 ggacatggattgtcctatatagtttagtagaagac 1688188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 278
Target Start/End: Original strand, 1834119 - 1834208
Alignment:
Q  192 ggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt--cccccctaaga 278  Q
    |||||||||||||||||||||| ||| |||| |||| ||| |||||||| ||||||| |||  ||||| ||||||||  |||||||||||    
T  1834119 ggctaaagtgcacttttccccctctaactttaaaaaacttacaattttgaccccctatgtataaaaactacaattttggcccccctaaga 1834208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 267
Target Start/End: Original strand, 3927664 - 3927742
Alignment:
Q  190 aaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||||||||| ||| |||| ||||| |||| |||||||||||| | |||  ||||| ||||||||    
T  3927664 aaggctaaagtgcacttttccccctctaacttttaaaatgttgcgattttggccccccatgtatgaaaactacaatttt 3927742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 8155741 - 8155813
Alignment:
Q  195 taaagtgcacttttcccccctatctttcaaaatcttgcaattttggc-cccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||| || ||||||||| ||||||||||| || ||||||||| | ||||| ||||||||    
T  8155741 taaagtgcacttttccccc-taactttcaaaaacttgcaattttagctcccctaagttcaaaaactacaatttt 8155813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 15058817 - 15058873
Alignment:
Q  189 aaaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccc 244  Q
    ||||||||||||||||||||  |||||||| ||||||||| |||| |||||||||||    
T  15058817 aaaggctaaagtgcacttttggccccctatgtttcaaaatgttgcgattttggcccc 15058873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 251
Target Start/End: Original strand, 35934347 - 35934402
Alignment:
Q  195 taaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagta 251  Q
    |||||||||||||| ||||||| ||||||||| |||| |||||||| ||||||||||    
T  35934347 taaagtgcactttt-ccccctaactttcaaaaacttgtaattttggtcccctaagta 35934402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 4357552 - 4357499
Alignment:
Q  195 taaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||||||||||| |||||||| ||||||||| |||| |||||| |||||||    
T  4357552 taaagtgcacttttcgccccctatatttcaaaatgttgcgattttgacccccta 4357499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 13826419 - 13826476
Alignment:
Q  191 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||||||||||||||| |||||||| ||| ||||| |||| |||||| |||||||    
T  13826419 aggctaaagtgcacttttcgccccctatgtttaaaaatgttgcgattttgacccccta 13826476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 35935631 - 35935558
Alignment:
Q  195 taaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||| ||||||| | |||| ||||  |||||||||| |||||||||||||  |||| ||||||||    
T  35935631 taaagtgcactttcccccccttaacttttaaaaatttgcaattttagccccctaagtacataaactacaatttt 35935558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 43793630 - 43793687
Alignment:
Q  191 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||||||| |||||||||| |||||||| ||| ||||| |||| ||||||||||||||    
T  43793630 aggctaaactgcacttttcgccccctatgttttaaaatgttgcgattttggcccccta 43793687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 52491709 - 52491632
Alignment:
Q  191 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||| |||||||| |||| | ||||||||| ||||||||||||| || |||| |||  |||| ||||||||    
T  52491709 aggctaaagtgtacttttccacccttaactttcaaaaacttgcaattttggtcctctaaatacagaaactacaatttt 52491632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 1964542 - 1964466
Alignment:
Q  192 ggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||| |||| | |||| ||||  || |||||||||||||||| | || ||||| ||||||||    
T  1964542 ggctaaagtgcacttttccacccttaacttttaaaaagttacaattttggccccctatgaacaaaaactacaatttt 1964466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 13394536 - 13394592
Alignment:
Q  192 ggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||||||||||||||||| |||||||| ||| ||||| |||| ||||| ||||||||    
T  13394536 ggctaaagtgcacttttcgccccctatgttttaaaatgttgcgattttagcccccta 13394592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 13397675 - 13397731
Alignment:
Q  192 ggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||||||||||||||||| |||||||| ||| ||||| |||| ||||| ||||||||    
T  13397675 ggctaaagtgcacttttcgccccctatgttttaaaatgttgcgattttagcccccta 13397731  T

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Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 13397987 - 13397923
Alignment:
Q  184 aaaataaaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||| ||||||||| | |||||||| ||| |||  ||||||||| |||||||||||||||||||    
T  13397987 aaaattaaggctaaacttcacttttcgccctctaagtttcaaaatattgcaattttggcccccta 13397923  T

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Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 21177996 - 21178072
Alignment:
Q  191 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||| ||||| |||||||| |||||| ||  |||||||||||  |||||| | || ||||| ||||||||    
T  21177996 aggctaaagtgtactttccccccctaactttcataaagttgcaattttgatcccctatgaacaaaaactacaatttt 21178072  T

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Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 37728662 - 37728590
Alignment:
Q  195 taaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||| |||| || |||| |||| ||||  |||||||||||||| |||| |||| ||||| ||||||||    
T  37728662 taaagtgcattttttcctcctaacttttaaaaagttgcaattttggcctcctatgtacaaaaactacaatttt 37728590  T

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Target: chr3 (Bit Score: 81; Significance: 4e-38; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 191 - 282
Target Start/End: Complemental strand, 5029784 - 5029692
Alignment:
Q  191 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaa-ttttcccccctaagaatta 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  5029784 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcctcctaagtaccaaaaccacaatttttcccccctaagaatta 5029692  T

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Target: chr3; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 181 - 273
Target Start/End: Original strand, 5001189 - 5001282
Alignment:
Q  181 aataaaataaaggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccc 273  Q
    ||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5001189 aataaaaaataggctaaagtgcacttttcctcccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttccccccc 5001282  T

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Target: chr3; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 183 - 278
Target Start/End: Complemental strand, 47610690 - 47610593
Alignment:
Q  183 taaaataaaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaaga 278  Q
    ||||||| ||| ||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  47610690 taaaatataggttaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaaga 47610593  T

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Target: chr3; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 192 - 278
Target Start/End: Original strand, 51469972 - 51470060
Alignment:
Q  192 ggctaaagtgcacttttccc-ccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaaga 278  Q
    |||||||||||||||||||| |||||  |||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  51469972 ggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttaacccccctaaga 51470060  T

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Target: chr3; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 182 - 267
Target Start/End: Complemental strand, 12703610 - 12703525
Alignment:
Q  182 ataaaataaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||||||||| ||| ||| |||||||||  ||| |||||||||||||||||||| ||||| ||||||||    
T  12703610 ataaaataaaggctaaagtgcactttttccctctaactttcaaaaatttgtaattttggccccctaagtacaaaaactacaatttt 12703525  T

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Target: chr3; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 278
Target Start/End: Original strand, 47609696 - 47609785
Alignment:
Q  191 aggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaaga 278  Q
    |||||||| ||||||||||||||| || ||||||||| |||||||||||| ||||||||||||||||||||||||||  |||||||||||    
T  47609696 aggctaaaatgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaaga 47609785  T

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Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 12700174 - 12700249
Alignment:
Q  191 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| ||||| ||||||||    
T  12700174 aggctaaagtgcacttt-cccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaatttt 12700249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 181 - 282
Target Start/End: Complemental strand, 22776924 - 22776821
Alignment:
Q  181 aataaaataaaggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaaga 278  Q
    ||||||||| |||||||||||||||||||| |||||| |||||| ||  ||||||||||||||||||| |||| ||||| ||||||||  ||||||||||    
T  22776924 aataaaatataggctaaagtgcacttttccacccctaactttcagaaagttgcaattttggccccctatgtacaaaaactacaattttggccccctaaga 22776825  T
Q  279 atta 282  Q
    ||||    
T  22776824 atta 22776821  T

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Target: chr3; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 191 - 266
Target Start/End: Complemental strand, 51470556 - 51470481
Alignment:
Q  191 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 266  Q
    ||||||||||||||| |||||||||| ||||||||| |||||||||| |  |||||||||||||||||||||||||    
T  51470556 aggctaaagtgcactcttcccccctaactttcaaaaacttgcaatttagatcccctaagtaccaaaaccacaattt 51470481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 7267647 - 7267719
Alignment:
Q  195 taaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||  |||| ||||||||    
T  7267647 taaagtgcacttttcccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaatttt 7267719  T

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Target: chr3; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 47614185 - 47614261
Alignment:
Q  192 ggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||| |||| ||| ||||||||| |||||||||||||||||||||||| |||||| ||||||||    
T  47614185 ggctaaagtgcactttttcccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaatttt 47614261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 29932810 - 29932724
Alignment:
Q  181 aataaaataaaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||| ||| |||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||||||||| ||||| ||||||||    
T  29932810 aatagaattaaggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgg-cccctaagtacaaaaactacaatttt 29932724  T

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Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 29981964 - 29981878
Alignment:
Q  181 aataaaataaaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||| ||| |||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||||||||| ||||| ||||||||    
T  29981964 aatagaattaaggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgg-cccctaagtacaaaaactacaatttt 29981878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 267
Target Start/End: Complemental strand, 54540894 - 54540815
Alignment:
Q  189 aaaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||||||||| | ||||||||| |||||||||||| |||| ||||||| ||||| ||||||||    
T  54540894 aaaggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaatttt 54540815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 7758401 - 7758478
Alignment:
Q  191 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||| |||||| | ||||||||| |||||||||||| |||||||||||| ||||| ||||||||    
T  7758401 aggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttt 7758478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 19984848 - 19984925
Alignment:
Q  191 aggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||||||||| ||  |||||||| |||||||||||||||||||| |||| ||||| ||||||||    
T  19984848 aggctaaagtgcacttttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaatttt 19984925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 186 - 267
Target Start/End: Original strand, 28262187 - 28262268
Alignment:
Q  186 aataaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||| |||||||||||||||||||||||||| |||||||||  |||| |||||||||||| | |||  ||||||||||||||    
T  28262187 aatataggctaaagtgcacttttcccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaatttt 28262268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 29931225 - 29931302
Alignment:
Q  191 aggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||||||| ||||||||| ||| ||||| ||||||||    
T  29931225 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaatttt 29931302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 29980379 - 29980456
Alignment:
Q  191 aggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||||||| ||||||||| ||| ||||| ||||||||    
T  29980379 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaatttt 29980456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 7268924 - 7268868
Alignment:
Q  195 taaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagta 251  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  7268924 taaagtgcacttttcccccctaactttcaaaaacttgcaattttggcctcctaagta 7268868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 267
Target Start/End: Original strand, 8456470 - 8456553
Alignment:
Q  184 aaaataaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||| ||| |||||||||||||||| |||||||  |||||||| ||||||||||||| ||||||| ||| ||||| ||||||||    
T  8456470 aaaaaaaaagctaaagtgcactttttccccctaattttcaaaaacttgcaattttggtcccctaaatacaaaaactacaatttt 8456553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 47615650 - 47615591
Alignment:
Q  191 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaag 249  Q
    ||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||    
T  47615650 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaag 47615591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 52281649 - 52281572
Alignment:
Q  191 aggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||||||||| ||||||||||||  |||| |||||||||||| | |||  ||||||||||||||    
T  52281649 aggctaaagtgcacttttccccccctatctttcaaaacgttgcgattttggccccccatgtatgaaaaccacaatttt 52281572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 190 - 267
Target Start/End: Complemental strand, 55192097 - 55192020
Alignment:
Q  190 aaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||| | ||| ||||| || ||||||||| |||||||||||||||| |||||||| ||||| ||||||||    
T  55192097 aaggctaaagtgtattttccccccttaactttcaaaaacttgcaattttggccctctaagtacaaaaactacaatttt 55192020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 3328805 - 3328869
Alignment:
Q  184 aaaataaaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||||||||||| |||||||||| |||||||| ||||||||| || ||||||||||||||||    
T  3328805 aaaataaaggctaaactgcacttttcgccccctatgtttcaaaatgttacaattttggcccccta 3328869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 52840705 - 52840629
Alignment:
Q  192 ggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||| ||||||| |||||| ||||||||| |||||||||||||| |||||| || |||||| ||||||||    
T  52840705 ggctaaagtgcccttttcctcccctaactttcaaaaacttgcaattttggctccctaattatcaaaacaacaatttt 52840629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 267
Target Start/End: Original strand, 24516458 - 24516536
Alignment:
Q  190 aaggctaaagtgcactttt-cccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||| ||||||||||||| |||||||| |||| |||| |||||||||||||| |||||||||  ||||| ||||||||    
T  24516458 aaggccaaagtgcactttttcccccctaactttaaaaaacttgcaattttggcaccctaagtataaaaactacaatttt 24516536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 267
Target Start/End: Original strand, 54539753 - 54539831
Alignment:
Q  190 aaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||| |||| | ||||||||| |||||||||||  |||||||| ||| ||||| ||||||||    
T  54539753 aaggctaaagtgcacttttccacccttaactttcaaaaacttgcaattttaaccccctaaatacaaaaactacaatttt 54539831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 11671442 - 11671385
Alignment:
Q  191 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaa 248  Q
    |||||||||||||||||| || |||| ||||||||| ||||||||||| |||||||||    
T  11671442 aggctaaagtgcactttttccgcctaactttcaaaaacttgcaattttagccccctaa 11671385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 22447739 - 22447796
Alignment:
Q  191 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||||||| |||||||||| |||||||| ||||||||| |||||||||||||||||||    
T  22447739 aggctaaactgcacttttcgccccctatgtttcaaaatgttgcaattttggcccccta 22447796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 52276303 - 52276380
Alignment:
Q  191 aggctaaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||||||| ||||||||||||||  |||| |||||||||||| | |||  ||||| ||||||||    
T  52276303 aggctaaagtgcacttttccccccctatctttcaaaacgttgcgattttggccccccatgtatgaaaacaacaatttt 52276380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 278
Target Start/End: Complemental strand, 535883 - 535795
Alignment:
Q  192 ggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttc-ccccctaaga 278  Q
    |||||||||| |||||||| |||||| ||||||||| ||||||||||||| ||| ||||||  ||||| | ||||||| ||||||||||    
T  535883 ggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggtcccttaagtattaaaactataattttcaccccctaaga 535795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 27852753 - 27852809
Alignment:
Q  192 ggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||||||||||||||||| |||||||| ||||||||| |||||||||| ||||||||    
T  27852753 ggctaaagtgcacttttcgccccctatgtttcaaaatgttgcaattttagcccccta 27852809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 189 - 272
Target Start/End: Original strand, 52839034 - 52839118
Alignment:
Q  189 aaaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttccccc 272  Q
    ||||||||||||||| ||||||||| ||| ||| |||||  ||| ||||||| ||| |||||||||||||| |||||||| ||||    
T  52839034 aaaggctaaagtgcaattttccccctctaacttccaaaaatttgtaattttgaccctctaagtaccaaaacaacaattttacccc 52839118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 282
Target Start/End: Original strand, 51037536 - 51037627
Alignment:
Q  192 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaatta 282  Q
    |||||||||||||||||| ||| || |||||||||  ||||||||||| ||| ||| | || ||||| ||||||||  ||||||||||||||    
T  51037536 ggctaaagtgcacttttctcccttaactttcaaaaagttgcaattttgaccctctatgaacaaaaactacaattttagccccctaagaatta 51037627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 18456165 - 18456088
Alignment:
Q  192 ggctaaagtgcacttttcccccc--tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||||||||  || |||||||||  |||| |||||||||||| | |||  ||||||||||||||    
T  18456165 ggctaaagtgcacttttcccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaatttt 18456088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 20002014 - 20001956
Alignment:
Q  189 aaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||||||||| |||||||||| ||||||  ||||||||| |||| ||||||||||||||    
T  20002014 aaaggctaaactgcacttttctcccctaagtttcaaaatgttgcgattttggcccccta 20001956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 245
Target Start/End: Original strand, 22775783 - 22775829
Alignment:
Q  199 gtgcacttttcccccctatctttcaaaatcttgcaattttggccccc 245  Q
    |||||||||||||||||| |||||||||  |||||||||||||||||    
T  22775783 gtgcacttttcccccctaactttcaaaaagttgcaattttggccccc 22775829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 534498 - 534575
Alignment:
Q  191 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||| |||| ||| || |||||| |||||||||||| || |||| |||| ||||| ||||||||    
T  534498 aggctaaagtgcactttttcccctctaactctcaaaaacttgcaattttgacctcctatgtacaaaaactacaatttt 534575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 22500595 - 22500652
Alignment:
Q  191 aggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||||||| ||||||||||  ||||||| ||||||||| |||||||||||||||||||    
T  22500595 aggctaaactgcacttttcggcccctatgtttcaaaatattgcaattttggcccccta 22500652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 26628024 - 26628081
Alignment:
Q  191 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||||||| | |||||||| |||||||| ||||||||| |||||||||||||||||||    
T  26628024 aggctaaactacacttttcgccccctatgtttcaaaatgttgcaattttggcccccta 26628081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 28173728 - 28173785
Alignment:
Q  191 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||||||||||||||| |||||||| ||||| ||| |||| ||||||||||||||    
T  28173728 aggctaaagtgcacttttcgccccctatgtttcataatgttgcgattttggcccccta 28173785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 28263213 - 28263136
Alignment:
Q  191 aggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||||| |||||| |||| ||||  |||| |||||||||||| | |||  ||||||||||||||    
T  28263213 aggctaaagtgcacttttccccccctaacttttaaaacgttgcgattttggccccccatgtatgaaaaccacaatttt 28263136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 8338940 - 8338996
Alignment:
Q  192 ggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||||||||||||||||| |||||||| ||||||||| |||| |||||| |||||||    
T  8338940 ggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgacccccta 8338996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 28154882 - 28154938
Alignment:
Q  192 ggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||| | |||||||| |||||||| ||||||||| |||||||||||||||||||    
T  28154882 ggctaaactacacttttcgccccctatgtttcaaaatgttgcaattttggcccccta 28154938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 267
Target Start/End: Complemental strand, 51038899 - 51038815
Alignment:
Q  184 aaaataaaggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||| |||||||||||||||||||| ||| || |||| ||||  ||||||||||| ||||||| | || ||||| ||||||||    
T  51038899 aaaatataggctaaagtgcacttttccacccttaacttttaaaaagttgcaattttgaccccctatgaacaaaaactacaatttt 51038815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 267
Target Start/End: Original strand, 18442626 - 18442707
Alignment:
Q  188 taaaggctaaagtgcacttt--tcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||   |||||||| |||||||||  |||| |||||||||||| | |||  ||||| ||||||||    
T  18442626 taaaggctaaagtgcactttccccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaactacaatttt 18442707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 267
Target Start/End: Original strand, 19487700 - 19487781
Alignment:
Q  188 taaaggctaaagtgcacttt--tcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||   |||||||| |||||||||  |||| |||||||||||| | |||  ||||| ||||||||    
T  19487700 taaaggctaaagtgcactttccccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaactacaatttt 19487781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 19986174 - 19986120
Alignment:
Q  191 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggcccc 244  Q
    |||||||||||||||||||||| || |  |||||||| |||||||||||||||||    
T  19986174 aggctaaagtgcacttttcccctcttaagtttcaaaaacttgcaattttggcccc 19986120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 25179880 - 25179826
Alignment:
Q  191 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccc 244  Q
    ||||||||||||||||||| |||||||| ||||||||| |||| || ||||||||    
T  25179880 aggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgatattggcccc 25179826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 32960644 - 32960698
Alignment:
Q  191 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccc 244  Q
    |||||||| |||| ||||| |||||||| ||||||||| ||||||||||||||||    
T  32960644 aggctaaactgcatttttcgccccctatgtttcaaaatgttgcaattttggcccc 32960698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 267
Target Start/End: Complemental strand, 46721323 - 46721245
Alignment:
Q  190 aaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||||| ||||||| |||| ||||  |||| |||||  ||||||| |||| ||||| ||||||||    
T  46721323 aaggctaaagtgcacttttctccccctaacttttaaaaagttgcgattttaaccccctatgtacaaaaactacaatttt 46721245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 49216247 - 49216321
Alignment:
Q  192 ggctaaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatt 265  Q
    ||||||||||||||||||| | ||||  ||||||||  ||||||||||| ||||||| |||| ||||| ||||||    
T  49216247 ggctaaagtgcacttttccacgcctaagtttcaaaaagttgcaattttgaccccctatgtacaaaaactacaatt 49216321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 13081199 - 13081142
Alignment:
Q  191 aggctaaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||||||||||| |||||| || ||||| ||||||||| |||| ||||||||||||||    
T  13081199 aggctaaagtgcgcttttcgcctcctatgtttcaaaatgttgcgattttggcccccta 13081142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 267
Target Start/End: Original strand, 31645000 - 31645049
Alignment:
Q  218 ctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||| ||| ||||||||||||||||||| | ||||| ||||||||    
T  31645000 ctttcaaaaacttacaattttggccccctaagtgcaaaaactacaatttt 31645049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 34878528 - 34878585
Alignment:
Q  191 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||||||| ||||||| || |||||||| ||||||||| |||| ||||||||||||||    
T  34878528 aggctaaactgcacttctcgccccctatgtttcaaaatgttgcgattttggcccccta 34878585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 46673044 - 46673101
Alignment:
Q  191 aggctaaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||||||||||||||||||  | ||||| ||||| ||| |||||||||||||||||||    
T  46673044 aggctaaagtgcacttttcgtctcctatgtttcataatgttgcaattttggcccccta 46673101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 4775834 - 4775906
Alignment:
Q  176 atgcaaataaaataaaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||| |||| |||| ||||| | |||||||| ||| |||  ||||||||| |||||||||||||||||||    
T  4775834 atgcaaagaaaaaaaagactaaactacacttttcaccctctaagtttcaaaatgttgcaattttggcccccta 4775906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 46719941 - 46720017
Alignment:
Q  192 ggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||| |||||||||| || |||| ||||  |||| |||||||||||||| |||  ||||| ||||||||    
T  46719941 ggctaaagtgcatttttccccccttaacttttaaaaagttgcgattttggccccctatgtataaaaactacaatttt 46720017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 1e-34; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 191 - 265
Target Start/End: Complemental strand, 34174084 - 34174010
Alignment:
Q  191 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatt 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34174084 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatt 34174010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 191 - 278
Target Start/End: Original strand, 127336 - 127423
Alignment:
Q  191 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccctaaga 278  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||  ||||||||||    
T  127336 aggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggtcccctaagtaccaaaaccacaatttagccccctaaga 127423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 191 - 278
Target Start/End: Complemental strand, 17782655 - 17782566
Alignment:
Q  191 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaaga 278  Q
    ||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  17782655 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaaga 17782566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 191 - 266
Target Start/End: Complemental strand, 3227696 - 3227620
Alignment:
Q  191 aggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 266  Q
    |||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3227696 aggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 3227620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 193 - 266
Target Start/End: Original strand, 3227109 - 3227182
Alignment:
Q  193 gctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 266  Q
    ||||||||||||||| ||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||    
T  3227109 gctaaagtgcactttccccccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 3227182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 191 - 278
Target Start/End: Original strand, 31949321 - 31949410
Alignment:
Q  191 aggctaaagtgcacttttccc-ccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaaga 278  Q
    ||||||||||||||||||||| |||||  |||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  31949321 aggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaaga 31949410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 17781663 - 17781749
Alignment:
Q  194 ctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaaga 278  Q
    ||||||||||||||||||||| || ||||||||| |||||||||||| ||||||||||||||||||||||||||  |||||||||||    
T  17781663 ctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaaga 17781749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 7501954 - 7501877
Alignment:
Q  191 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||| |||||| ||||||||    
T  7501954 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaatttt 7501877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 191 - 266
Target Start/End: Complemental strand, 31949904 - 31949828
Alignment:
Q  191 aggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 266  Q
    ||||||||||||||| |||||||| || ||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  31949904 aggctaaagtgcactcttccccccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaattt 31949828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 192 - 278
Target Start/End: Complemental strand, 47525468 - 47525380
Alignment:
Q  192 ggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaaga 278  Q
    |||||||||||||||||||||| ||| ||||||||| ||||||||||| |||||||||||| ||||||||||||||  |||||||||||    
T  47525468 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttagccccctaagtatcaaaaccacaatttagcccccctaaga 47525380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 47524532 - 47524599
Alignment:
Q  199 gtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatt 265  Q
    ||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  47524532 gtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatt 47524599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 18371424 - 18371500
Alignment:
Q  192 ggctaaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||| |||| ||||||||| ||||||||||||||||| ||||||| ||||| ||||||||    
T  18371424 ggctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaatttt 18371500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 128705 - 128614
Alignment:
Q  189 aaaggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaaga 278  Q
    ||||| ||||||||||||||||| || || |||||||||  ||||||||||| ||||||||||||||||||||||||||  |||||||||||    
T  128705 aaaggttaaagtgcacttttcccaccataactttcaaaaatttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaaga 128614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 247
Target Start/End: Complemental strand, 8527109 - 8527042
Alignment:
Q  181 aataaaataaaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||| |||| ||||||||||||||    
T  8527109 aataaaataaaggctaaagtgcacttttcgccccctatatttcaaaatgttgcgattttggcccccta 8527042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 22630554 - 22630477
Alignment:
Q  191 aggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||| || || ||||||||| ||||||||||||||||||||| ||| ||||| ||||||||    
T  22630554 aggctaaagtgcacttttccctccataactttcaaaaacttgcaattttggccccctaattacaaaaactacaatttt 22630477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 267
Target Start/End: Original strand, 7500452 - 7500530
Alignment:
Q  189 aaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||||||| || ||||||||| ||||||||||||  || |||||||   |||||||||||||    
T  7500452 aaaggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttgatcctctaagtatagaaaccacaatttt 7500530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 267
Target Start/End: Complemental strand, 18372544 - 18372482
Alignment:
Q  205 ttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||  |||||||| ||||||||||||||||||||||||| ||||| ||||||||    
T  18372544 ttttcccccctaattttcaaaaacttgcaattttggccccctaagtacaaaaactacaatttt 18372482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 31659622 - 31659699
Alignment:
Q  192 ggctaaagtgcactttt--cccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||  |||||||| ||||||||| ||| |||||||| |||||||||||| ||||| ||||||||    
T  31659622 ggctaaagtgcacttttaccccccctaactttcaaaaacttacaattttgaccccctaagtacaaaaactacaatttt 31659699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 20636931 - 20636866
Alignment:
Q  183 taaaataaaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||| |||| |||||| |||||||    
T  20636931 taaaataaaggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgacccccta 20636866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 263
Target Start/End: Complemental strand, 20163665 - 20163585
Alignment:
Q  184 aaaataaaggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaa 263  Q
    |||| |||||||||||||||||| ||| |||||| ||||||||| |||||||||||||| ||||| |||| ||||| ||||    
T  20163665 aaaaaaaaggctaaagtgcacttctccacccctaactttcaaaaacttgcaattttggctccctatgtacaaaaactacaa 20163585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 11658372 - 11658455
Alignment:
Q  185 aaataaaggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||| |||||||| ||||||||||||||| || ||||||||| | ||||||||| |||||||| |||| ||||| ||||||||    
T  11658372 aaatataggctaaattgcacttttccccccttaactttcaaaaacatgcaattttagccccctatgtacaaaaactacaatttt 11658455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 267
Target Start/End: Complemental strand, 14999249 - 14999180
Alignment:
Q  197 aagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||  |||||||| |||||||||||| |||||||| ||| ||||| ||||||||    
T  14999249 aagtgcacttttcccccctaattttcaaaa-cttgcaattttgaccccctaaatacaaaaactacaatttt 14999180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 27869194 - 27869252
Alignment:
Q  190 aaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||||||||||||||||||| |||||||| ||||||||| |||| |||||| |||||||    
T  27869194 aaggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgacccccta 27869252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 42271638 - 42271580
Alignment:
Q  190 aaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||||||||||||||||||| |||||||| ||| ||||| |||||||||| ||||||||    
T  42271638 aaggctaaagtgcacttttcgccccctatgttttaaaatgttgcaatttttgcccccta 42271580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 42886384 - 42886311
Alignment:
Q  195 taaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||| || |||| |||||||||  ||||||||||| |||||||| ||| ||||| ||||||||    
T  42886384 taaagtgcacttttctcctcctaactttcaaaaatttgcaattttgaccccctaaatacaaaaactacaatttt 42886311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 21505415 - 21505490
Alignment:
Q  191 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||| ||||||| |||||||||  |||| |||||||||||| |  ||| ||||| ||||||||    
T  21505415 aggctaaagtgcactttt-ccccctaactttcaaaaagttgcgattttggcccccgatatacaaaaactacaatttt 21505490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 36746806 - 36746751
Alignment:
Q  192 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||| | |||||||| ||||||| ||| ||||| |||||||||||||||||||    
T  36746806 ggctaaactacacttttcgcccctatgttttaaaatgttgcaattttggcccccta 36746751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 3562431 - 3562489
Alignment:
Q  190 aaggctaaagtgcacttttccc-ccctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||| ||||||||||||||| | |||||| ||||||||| |||| ||||||||||||||    
T  3562431 aaggttaaagtgcacttttcgctccctatgtttcaaaatgttgcgattttggcccccta 3562489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 19195212 - 19195270
Alignment:
Q  190 aaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||||| |||| ||||| |||||||| ||||||||| |||||||||||| ||||||    
T  19195212 aaggctaaactgcatttttcaccccctatgtttcaaaatattgcaattttggtccccta 19195270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 21690415 - 21690469
Alignment:
Q  191 aggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggcccc 244  Q
    |||||||| | ||||||||  ||||||| ||||||||||||||||||||||||||    
T  21690415 aggctaaactacacttttcgtcccctatgtttcaaaatcttgcaattttggcccc 21690469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 14998007 - 14998067
Alignment:
Q  191 aggctaaagtgcac--ttttcccccctatctttcaaaatcttgcaattttggccccctaag 249  Q
    ||||||||||||||  ||||  |||||| ||||||||| ||| ||||||||||||||||||    
T  14998007 aggctaaagtgcacctttttttcccctaactttcaaaaacttacaattttggccccctaag 14998067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 24597516 - 24597573
Alignment:
Q  191 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||||||||||||||| || ||||| ||||||||| |||  ||||||||||||||    
T  24597516 aggctaaagtgcacttttcgcctcctatgtttcaaaatgttgtgattttggcccccta 24597573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 267
Target Start/End: Original strand, 47369772 - 47369857
Alignment:
Q  183 taaaataaaggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||| |||||||||| |||||||||   |||||| ||||||||| ||||||||||| ||| | ||||||| ||||| | ||||||    
T  47369772 taaaaaaaaggctaaaatgcactttttttcccctaactttcaaaaacttgcaattttagcctcataagtacaaaaactataatttt 47369857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 5490980 - 5490924
Alignment:
Q  191 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggccccct 246  Q
    ||||| || |||||||||| |||||||| ||||||||  ||||||||||||||||||    
T  5490980 aggcttaaatgcacttttcaccccctatgtttcaaaaagttgcaattttggccccct 5490924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 21224353 - 21224409
Alignment:
Q  191 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||||||| |||| ||||| ||| ||| ||||||||| |||||||||||| ||||||    
T  21224353 aggctaaactgcatttttcgcccttatgtttcaaaatgttgcaattttggtccccta 21224409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 39182245 - 39182181
Alignment:
Q  184 aaaataaaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||| |||||||||| |||||||||| |||||||  ||| ||||| ||||||||||| |||||||    
T  39182245 aaaaaaaaggctaaactgcacttttcgccccctaagtttaaaaatgttgcaattttgacccccta 39182181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 5e-28; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 181 - 278
Target Start/End: Original strand, 52827336 - 52827435
Alignment:
Q  181 aataaaataaaggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaaga 278  Q
    ||||||| |||||||||||||||||||||||||| || ||||||||| |||||||||||| ||||||||||||||||||||||||||  |||||||||||    
T  52827336 aataaaaaaaaggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaaga 52827435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 26372033 - 26371972
Alignment:
Q  130 acaatttaatttctcccatatattagagtcacatgcaatagaatgcatgcaaataaaataaa 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26372033 acaatttaatttctcccatatattagagtcacatgcaatagaatgcatgcaaataaaataaa 26371972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 192 - 278
Target Start/End: Original strand, 41364829 - 41364916
Alignment:
Q  192 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaaga 278  Q
    |||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||  |||||||||||    
T  41364829 ggctaaagtgcacttttctcccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaatttagcccccctaaga 41364916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 184 - 278
Target Start/End: Complemental strand, 41366239 - 41366144
Alignment:
Q  184 aaaataaaggctaaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccctaaga 278  Q
    ||||||||||||||||||||||||||||| |||| ||||||||| | ||||||||| ||||| |||||| ||||||||||||||  ||||||||||    
T  41366239 aaaataaaggctaaagtgcacttttcccctcctaactttcaaaaacatgcaattttagccccttaagtatcaaaaccacaatttagccccctaaga 41366144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 45150068 - 45149990
Alignment:
Q  195 taaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccc 273  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||| ||||| |||||||| |||||    
T  45150068 taaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccttaagtacaaaaacaacaattttgccccc 45149990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 14999284 - 14999360
Alignment:
Q  191 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||| |||||||||||||| ||||||||| |||||||||||| |||||||||||| ||||| ||||||||    
T  14999284 aggctaaagtgtacttttcccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttt 14999360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 188 - 267
Target Start/End: Complemental strand, 45157313 - 45157234
Alignment:
Q  188 taaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||||||||||||| |||| ||||| ||||||||    
T  45157313 taaaggctaaagtgcactttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaatttt 45157234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 284
Target Start/End: Original strand, 7983053 - 7983143
Alignment:
Q  195 taaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattatc 284  Q
    ||||||||||||||| ||| || ||||||| | |||||||||||||||||||| ||| ||||||||||||||| ||||||||||| |||||    
T  7983053 taaagtgcacttttctcccgtaactttcaacaacttgcaattttggccccctatgtatcaaaaccacaattttgcccccctaagatttatc 7983143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 267
Target Start/End: Original strand, 52274966 - 52275044
Alignment:
Q  190 aaggctaaagtgcactttt-cccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||| ||||| ||||||||    
T  52274966 aaggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttt 52275044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 278
Target Start/End: Complemental strand, 52828168 - 52828083
Alignment:
Q  195 taaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaaga 278  Q
    ||||||||||||||||||| |||  |||||||| |||||||||||||| ||||||||||||||||||||||||  |||||||||||    
T  52828168 taaagtgcacttttccccctctaattttcaaaaacttgcaattttggctccctaagtaccaaaaccacaatttagcccccctaaga 52828083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 39699867 - 39699792
Alignment:
Q  192 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||||||| ||||||| | |||||||||||| ||||||||||||  |||| ||||||||    
T  39699867 ggctaaagtgcacttttcccccctaactttcaataacttgcaattttgaccccctaagtacagaaactacaatttt 39699792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 190 - 267
Target Start/End: Complemental strand, 24426178 - 24426100
Alignment:
Q  190 aaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||| ||||||||||||| ||||| ||| ||||||||| ||||||||||||||||||||||||| ||||| ||||||||    
T  24426178 aaggttaaagtgcactttcccccctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaatttt 24426100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 24422799 - 24422876
Alignment:
Q  191 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||| |||||| | ||||||||| |||||||||||| |||||||||||| ||||| ||||||||    
T  24422799 aggctaaagtgcacttttacccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttt 24422876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 276
Target Start/End: Original strand, 35594208 - 35594301
Alignment:
Q  183 taaaataaaggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccctaa 276  Q
    |||| ||||||||||||||||||||||| |||||| ||||||||| ||||||||||| | ||||||||||  ||||| ||||||||  |||||||    
T  35594208 taaattaaaggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttt-gacccctaagtattaaaactacaattttgacccctaa 35594301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 11437301 - 11437224
Alignment:
Q  191 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||| |||||| | ||||||||| ||||||||||||| ||| ||||||| ||||| ||||||||    
T  11437301 aggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaatttt 11437224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 23980568 - 23980491
Alignment:
Q  191 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||||| ||| |||| |||| |||||||||||||| |||||||||| ||||| | ||||||    
T  23980568 aggctaaagtgcacttttccccctctaactttaaaaaacttgcaattttggctccctaagtacaaaaactataatttt 23980491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 7674527 - 7674602
Alignment:
Q  191 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||| ||||||||||||| |||| |||| |||||||||||||  |||||||||| ||||| ||||||||    
T  7674527 aggctaaagtgcccttttcccccctaacttttaaaaacttgcaattttgg-gccctaagtacaaaaactacaatttt 7674602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 36614005 - 36613929
Alignment:
Q  192 ggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||| |||||| |||||| |||| |||| |||| |||||||||||||||||||| ||||| ||||||||    
T  36614005 ggctaaagtgcatttttcctcccctaacttttaaaaacttgtaattttggccccctaagtacaaaaactacaatttt 36613929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 43058789 - 43058861
Alignment:
Q  195 taaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||| ||||||| ||||||| |||| |||| |||||||||||| |||||||||||| ||||| ||||||||    
T  43058789 taaagtacactttttccccctaactttgaaaaacttgcaattttgaccccctaagtacaaaaactacaatttt 43058861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 278
Target Start/End: Original strand, 45148581 - 45148668
Alignment:
Q  192 ggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaaga 278  Q
    ||||||||||||||||| ||| || | ||||||||| ||||||||||||||||||||||||  ||||| |||||||| |||||||||||    
T  45148581 ggctaaagtgcactttttcccgcttaactttcaaaaacttgcaattttggccccctaagta-aaaaactacaattttgcccccctaaga 45148668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 278
Target Start/End: Complemental strand, 37526986 - 37526891
Alignment:
Q  184 aaaataaaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccctaaga 278  Q
    ||||| |||| ||||||| ||||||||||||| | ||||||||| |||||||||||||| |||||| ||   |||||||||||||  |||||||||    
T  37526986 aaaattaaggttaaagtgtacttttccccccttaactttcaaaaacttgcaattttggctccctaaatatagaaaccacaattttggcccctaaga 37526891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 264
Target Start/End: Complemental strand, 39222575 - 39222501
Alignment:
Q  192 ggctaaagtgcacttttcccccctat--ctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaat 264  Q
    ||||||||||||||||| |||||| |  ||||||||| ||||||||||||||||||||||||  ||||| |||||    
T  39222575 ggctaaagtgcacttttaccccctttaactttcaaaaacttgcaattttggccccctaagtataaaaactacaat 39222501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 50680319 - 50680391
Alignment:
Q  177 tgcaaataaaataaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagta 251  Q
    |||||||||||||  || ||||||||| ||||||||| || ||| ||||| ||||||||||||||||||||||||    
T  50680319 tgcaaataaaata--ggttaaagtgcatttttcccccttaacttccaaaaacttgcaattttggccccctaagta 50680391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 267
Target Start/End: Original strand, 51684355 - 51684442
Alignment:
Q  181 aataaaataaaggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||| | ||||||||||||||||||||||| || |||| ||||  ||||||||||||||||||| |||  ||||| ||||||||    
T  51684355 aataaaatcatggctaaagtgcacttttccccccttaacttttaaaaagttgcaattttggccccctatgtataaaaactacaatttt 51684442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 4059520 - 4059578
Alignment:
Q  190 aaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||||||||||||||||||| |||||||| ||||||||| |||| ||||||||||||||    
T  4059520 aaggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggcccccta 4059578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 11436032 - 11436118
Alignment:
Q  182 ataaaataaaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||| |||||||||||||||||||||||||  || ||||||||| |||||||||||||||   ||||||  ||||| ||||||||    
T  11436032 ataaaaaaaaggctaaagtgcacttttccccctttaactttcaaaaacttgcaattttggccttttaagtataaaaactacaatttt 11436118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 39698555 - 39698624
Alignment:
Q  184 aaaataaaggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtac 252  Q
    |||| ||||||||||||||||||| |||||| || |||| |||| ||| |||||||||||||||||||||    
T  39698555 aaaaaaaaggctaaagtgcactttaccccccttaacttttaaaaactttcaattttggccccctaagtac 39698624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 51685867 - 51685790
Alignment:
Q  191 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||||| ||| |||||||||  |||| |||||||||| ||| |||| ||||| ||||||||    
T  51685867 aggctaaagtgcacttttccccctctaactttcaaaaagttgcgattttggccctctatgtacaaaaactacaatttt 51685790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 267
Target Start/End: Complemental strand, 33088721 - 33088642
Alignment:
Q  189 aaaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||||| | ||| | ||||||| |||||||||||| |||  ||||||| ||||| ||||||||    
T  33088721 aaaggctaaagtgcacttttccctctctaacattcaaaaacttgcaattttgaccctttaagtacaaaaactacaatttt 33088642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 267
Target Start/End: Complemental strand, 39153220 - 39153141
Alignment:
Q  189 aaaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||| |||||||||||||| |||||| |  |||||||| ||||||||||||||||| || |||| ||||| ||||||||    
T  39153220 aaaggttaaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaatttt 39153141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 35067104 - 35067027
Alignment:
Q  191 aggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||||||||| ||  ||||||||  |||| |||||||||||||| | || ||||| ||||||||    
T  35067104 aggctaaagtgcacttttccccccttaagtttcaaaaagttgcgattttggccccctatgaacaaaaactacaatttt 35067027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 46432215 - 46432272
Alignment:
Q  191 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||||||||||||||| |||||||| ||||| ||| |||| ||||||||||||||    
T  46432215 aggctaaagtgcacttttcgccccctatgtttcataatgttgcgattttggcccccta 46432272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 24750075 - 24750020
Alignment:
Q  190 aaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccc 244  Q
    ||||||||| |||||||||| |||||||| ||| ||||| ||||||||||||||||    
T  24750075 aaggctaaactgcacttttcgccccctatgttttaaaatgttgcaattttggcccc 24750020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 267
Target Start/End: Complemental strand, 43378817 - 43378738
Alignment:
Q  188 taaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||| ||||||||||||||| | | || ||||||||| ||| ||||||||  ||||||||||| ||||  ||||||||    
T  43378817 taaaggttaaagtgcacttttctctcttaactttcaaaaacttacaattttgatcccctaagtacaaaaattacaatttt 43378738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 267
Target Start/End: Original strand, 44404439 - 44404518
Alignment:
Q  189 aaaggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||| ||||||||| ||| | || ||||||||| || |||||||| ||||||||||||| ||||| | ||||||    
T  44404439 aaaggctaaaatgcactttttccctcataactttcaaaaactagcaattttagccccctaagtacaaaaactataatttt 44404518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 48471864 - 48471919
Alignment:
Q  193 gctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||||||||||||||||  ||||||| ||||||||| |||| ||||||||||||||    
T  48471864 gctaaagtgcacttttcgtcccctatgtttcaaaatgttgcgattttggcccccta 48471919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 267
Target Start/End: Original strand, 39151945 - 39152007
Alignment:
Q  205 ttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||| ||  |||||||| |||| ||||||||||||||| |||| ||||| ||||||||    
T  39151945 ttttcccccttaagtttcaaaaacttgtaattttggccccctatgtacaaaaactacaatttt 39152007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 51719122 - 51719179
Alignment:
Q  191 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||||||| |||||||||| ||| |||| ||||| ||| |||||||||||||||||||    
T  51719122 aggctaaactgcacttttcgccctctatgtttcataatgttgcaattttggcccccta 51719179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 15000059 - 14999995
Alignment:
Q  189 aaaggctaaagtgcacttttccc-ccctatctttcaaaatcttgcaattttggccccctaagtac 252  Q
    |||||||||||| ||||||| || ||||| |||| |||| ||||||||||||  |||||||||||    
T  15000059 aaaggctaaagttcactttttcctccctaacttttaaaaacttgcaattttgatcccctaagtac 14999995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 24962257 - 24962201
Alignment:
Q  192 ggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||| || ||||||| |||||||| ||||||||| ||||| |||||||||||||    
T  24962257 ggctaaactgtacttttcgccccctatgtttcaaaatgttgcagttttggcccccta 24962201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 52276261 - 52276197
Alignment:
Q  195 taaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaac 258  Q
    ||||||||||||| ||||  ||| |||||||||  ||| |||||||||||||||||||| |||||    
T  52276261 taaagtgcactttcccccttctaactttcaaaaatttgtaattttggccccctaagtacaaaaac 52276197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 189 - 267
Target Start/End: Original strand, 19752909 - 19752987
Alignment:
Q  189 aaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||| ||||||||    
T  19752909 aaaggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaatttt 19752987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 191 - 278
Target Start/End: Complemental strand, 5778938 - 5778849
Alignment:
Q  191 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaaga 278  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||||||||| |||||||||||||||||||||||||||  |||||||||||    
T  5778938 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaatttttgccccctaagtaccaaaaccacaatttagcccccctaaga 5778849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 191 - 278
Target Start/End: Original strand, 5777900 - 5777987
Alignment:
Q  191 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaaga 278  Q
    ||||||||||||||||| |||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||  |||||||||||    
T  5777900 aggctaaagtgcacttt-cccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaaga 5777987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 266
Target Start/End: Original strand, 5730440 - 5730517
Alignment:
Q  191 aggctaaagtgcacttttcccccc--tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 266  Q
    ||||||||||||||||||||||||  || ||||||||| ||||||||||||||  |||||||||||||||||||||||    
T  5730440 aggctaaagtgcacttttcccccccttaactttcaaaaacttgcaattttggcttcctaagtaccaaaaccacaattt 5730517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 186 - 267
Target Start/End: Original strand, 18485132 - 18485214
Alignment:
Q  186 aataaaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||||| |||| ||| |||| |||| |||||||||||||||||||||||| |||||| ||||||||    
T  18485132 aataaaggctaaagtgcactttttcccctctaactttaaaaaacttgcaattttggccccctaagtatcaaaacaacaatttt 18485214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 180 - 276
Target Start/End: Complemental strand, 22940738 - 22940638
Alignment:
Q  180 aaataaaataaa---ggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttccccccta 275  Q
    ||||||||||||   |||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||| ||||  ||||||||  ||||||    
T  22940738 aaataaaataaacttggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaattacaattttgaccccta 22940639  T
Q  276 a 276  Q
    |    
T  22940638 a 22940638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 25523068 - 25523145
Alignment:
Q  191 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||||||| | ||||||||| ||||||||||| ||||||||||||| ||||| ||||||||    
T  25523068 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaatttt 25523145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 23915530 - 23915469
Alignment:
Q  16 cttctccatatatataggggaaagacttccaattaccaattgacgaaaatacccctataagggc 79  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||    
T  23915530 cttctccatatatat--gggaaagacttccaattaccaattgacgaaaatacccttataagggc 23915469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 28539931 - 28539845
Alignment:
Q  181 aataaaataaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||| ||||| ||||||||| |||||||||||| |||| |||| |||||||||||| ||| |||||||| ||||| ||||||||    
T  28539931 aataaaaaaaaggttaaagtgcatttttcccccctaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaatttt 28539845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 18487004 - 18486927
Alignment:
Q  191 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||| ||||||| | ||||||||| ||||||||||||||||||||||||   |||||||||||||    
T  18487004 aggctaaagtgcactttcccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaatttt 18486927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 19754233 - 19754155
Alignment:
Q  191 aggctaaagtgcactttt--cccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||| ||||  |||||||| ||||||||| ||||||||||||||||||||| ||| ||||| ||||||||    
T  19754233 aggctaaagtgcatttttttcccccctaactttcaaaaacttgcaattttggccccctaaatacaaaaactacaatttt 19754155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 267
Target Start/End: Complemental strand, 36486591 - 36486513
Alignment:
Q  190 aaggctaaagtgcactttt-cccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||| |||||||||||| |||||||| |||| |||| |||||||||||| |||||||||||| ||||| ||||||||    
T  36486591 aaggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaatttt 36486513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 284
Target Start/End: Original strand, 20214196 - 20214289
Alignment:
Q  192 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccct-aagaattatc 284  Q
    |||||||||||||||||||||| || ||||||||| ||||||||||| || | ||| |||| ||||| ||||||||  ||||| ||||||||||    
T  20214196 ggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttagcactctatgtacaaaaactacaattttggcccctcaagaattatc 20214289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 28538675 - 28538752
Alignment:
Q  191 aggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||||| ||| || ||||||||| |||||||||||| |||| ||||||| ||||| ||||||||    
T  28538675 aggctaaagtgcacttttccacccgtaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaatttt 28538752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 25056482 - 25056406
Alignment:
Q  192 ggctaaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||| | |||| ||||||||| |||||||||||| |||||||||||  ||||| ||||||||    
T  25056482 ggctaaagtgcacttttccactcctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaatttt 25056406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 5730934 - 5730888
Alignment:
Q  220 ttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 266  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||    
T  5730934 ttcaaaaacttccaattttggccccctaagtaccaaaaccacaattt 5730888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 267
Target Start/End: Original strand, 33158096 - 33158174
Alignment:
Q  190 aaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||| ||||  ||||||| ||||||||| |||||||||||| | |||||||||| ||||| ||||||||    
T  33158096 aaggctaaagtgcatttttttccccctaactttcaaaaacttgcaattttgacaccctaagtacaaaaactacaatttt 33158174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 16650957 - 16650880
Alignment:
Q  191 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||||| |||| | |||| |||| |||||||||||| |||||||||||  ||||| ||||||||    
T  16650957 aggctaaagtgcacttttccacccttaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaatttt 16650880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 18695307 - 18695250
Alignment:
Q  191 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||||||||||||||| |||||||| ||||||||| |||| ||||||||||||||    
T  18695307 aggctaaagtgcacttttcgccccctatgtttcaaaatattgcgattttggcccccta 18695250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 25556875 - 25556932
Alignment:
Q  190 aaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||||| ||||||| || ||||||| ||||||||| |||||||||||||||||||    
T  25556875 aaggctaaactgcacttatcgcccctatgtttcaaaatgttgcaattttggcccccta 25556932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 33160388 - 33160327
Alignment:
Q  191 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagta 251  Q
    ||||||||||||||||||||||||| |  |||||||| ||||||||||| ||||||||||||    
T  33160388 aggctaaagtgcacttttccccccttaattttcaaaaacttgcaattttagccccctaagta 33160327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 267
Target Start/End: Original strand, 24332910 - 24332989
Alignment:
Q  189 aaaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||| |||||||||||||| |||||| |  |||||||| ||||||||||||||||| || |||| ||||| ||||||||    
T  24332910 aaaggttaaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaatttt 24332989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 25524230 - 25524152
Alignment:
Q  191 aggctaaagtgcacttttcccccc--tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||||||  ||  ||| ||||  ||| |||||||||||||||||||| ||||| ||||||||    
T  25524230 aggctaaagtgcacttttcccccccctaatttttaaaaatttgtaattttggccccctaagtacaaaaactacaatttt 25524152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 23765419 - 23765473
Alignment:
Q  191 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccc 244  Q
    |||||||| |||||||||| |||||||| ||||||||| ||||||||||||||||    
T  23765419 aggctaaactgcacttttcgccccctatgtttcaaaatgttgcaattttggcccc 23765473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 23815267 - 23815321
Alignment:
Q  191 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccc 244  Q
    |||||||| |||||||||| |||||||| ||||||||| ||||||||||||||||    
T  23815267 aggctaaactgcacttttcgccccctatgtttcaaaatgttgcaattttggcccc 23815321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 31055314 - 31055371
Alignment:
Q  191 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||||||| |||||||||| |||||||| ||||| ||| |||||||||||||||||||    
T  31055314 aggctaaactgcacttttcgccccctatgtttcataatgttgcaattttggcccccta 31055371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 282
Target Start/End: Original strand, 1015476 - 1015576
Alignment:
Q  184 aaaataaaggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaatt 281  Q
    ||||||||||| ||| ||||||||||| |||||| |||| ||||  || |||||||||||||||  |||| ||| | ||||||||  |||||||||||||    
T  1015476 aaaataaaggcaaaaatgcacttttcctcccctaacttttaaaaagttacaattttggccccctgtgtacaaaacctacaattttaaccccctaagaatt 1015575  T
Q  282 a 282  Q
    |    
T  1015576 a 1015576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 247
Target Start/End: Original strand, 24025017 - 24025077
Alignment:
Q  188 taaaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||||||||||||||||| ||| |||||||  ||||||||| |||| ||||||||||||||    
T  24025017 taaaggctaaagtgcactattcgccccctaagtttcaaaatattgcgattttggcccccta 24025077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 267
Target Start/End: Original strand, 21835030 - 21835116
Alignment:
Q  181 aataaaataaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||| |||||||||||||||||||| |||| |||  ||| ||||  |||  |||||| ||||||| |||| ||||| ||||||||    
T  21835030 aataaagtaaaggctaaagtgcactttccccctctaagtttgaaaaagttgtgattttgaccccctatgtacaaaaactacaatttt 21835116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 267
Target Start/End: Complemental strand, 40255783 - 40255697
Alignment:
Q  182 ataaaataaaggctaaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||| | |||||||||||||||||||||| | ||  ||| |||| |||||||||||| |||||||| |||  |||| ||||||||    
T  40255783 ataaaagataggctaaagtgcacttttcccctcttaatttttaaaaacttgcaattttgaccccctaaatacagaaactacaatttt 40255697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 20216861 - 20216788
Alignment:
Q  195 taaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||| |  |||||||| ||||||||||| || |||||  ||| ||||| ||||||||    
T  20216861 taaagtgcacttttccccccttaattttcaaaaacttgcaattttagctccctatatacaaaaactacaatttt 20216788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 25055411 - 25055488
Alignment:
Q  191 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||||| ||| |||| ||  |||||||||||||  |||||| |||  ||||| ||||||||    
T  25055411 aggctaaagtgcacttttccccctctaactttaaacttcttgcaattttgatcccctatgtataaaaactacaatttt 25055488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 34893686 - 34893739
Alignment:
Q  212 ccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatt 265  Q
    ||||| ||||||||| |||||||||||||| ||||| |||| ||||| ||||||    
T  34893686 ccctaactttcaaaaacttgcaattttggctccctatgtacaaaaactacaatt 34893739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 40428642 - 40428695
Alignment:
Q  195 taaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||||||||||| |||||||| ||||||||| |||| ||||||| ||||||    
T  40428642 taaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggtccccta 40428695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 247
Target Start/End: Complemental strand, 245910 - 245842
Alignment:
Q  180 aaataaaataaaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||||||| ||||||||||||||||||||| || ||||| ||| ||||| |||| ||||| | ||||||    
T  245910 aaataaaacaaaggctaaagtgcacttttcgccacctatgttttaaaatgttgcgattttagtccccta 245842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 42195137 - 42195208
Alignment:
Q  195 taaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||| || |||| ||||  |||| |||||||||||||| |||| ||| | ||||||||    
T  42195137 taaagtgcacttttcccccttaacttt-aaaaagttgcgattttggccccctatgtacaaaatctacaatttt 42195208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 8e-27; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 183 - 282
Target Start/End: Original strand, 36449769 - 36449870
Alignment:
Q  183 taaaataaaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaat 280  Q
    ||||||| ||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||| ||||| |||||||| |||||| ||||||    
T  36449769 taaaatataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgcccccccaagaat 36449868  T
Q  281 ta 282  Q
    ||    
T  36449869 ta 36449870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 192 - 278
Target Start/End: Complemental strand, 1034570 - 1034482
Alignment:
Q  192 ggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaaga 278  Q
    |||||||||||||||||||||||| | ||||||||| | |||||||||||||||||| ||||||||||||||||||  |||||||||||    
T  1034570 ggctaaagtgcacttttccccccttaactttcaaaaacatgcaattttggccccctacgtaccaaaaccacaatttagcccccctaaga 1034482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 38840605 - 38840518
Alignment:
Q  181 aataaaataaaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||| | ||||||||||||||||||||||||| | ||||||||| ||||||||||| ||||||||||||| ||||| ||||||||    
T  38840605 aataaaaaataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaatttt 38840518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 191 - 278
Target Start/End: Complemental strand, 18906089 - 18906001
Alignment:
Q  191 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccctaaga 278  Q
    ||||||||||||||||||||||  ||| ||||||||| ||||||||||| ||||||||||||| ||||| ||||||||  |||||||||    
T  18906089 aggctaaagtgcacttttccccttctaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagcccctaaga 18906001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 267
Target Start/End: Complemental strand, 802695 - 802616
Alignment:
Q  188 taaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||| ||||||||||||||  |||||||| |||||||||||||||||||  |||| ||||| ||||||||    
T  802695 taaaggctaaagtgtacttttcccccctaagtttcaaaaacttgcaattttggccccctgtgtacaaaaactacaatttt 802616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 190 - 267
Target Start/End: Original strand, 22848189 - 22848267
Alignment:
Q  190 aaggctaaagtgcactttt-cccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||| |||||||| ||||||||| ||||||||||||| ||||||| ||| ||||| ||||||||    
T  22848189 aaggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttggtcccctaaatacaaaaactacaatttt 22848267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 7899984 - 7899907
Alignment:
Q  191 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||||||| | ||||||||| ||||||||||||| |||||||||||  |||| ||||||||    
T  7899984 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaatttt 7899907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 18904366 - 18904443
Alignment:
Q  191 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||||||| | ||||||||| | ||||||||||||||| ||||||| ||||| ||||||||    
T  18904366 aggctaaagtgcacttttccccccttaactttcaaaaacgtgcaattttggccccttaagtacaaaaactacaatttt 18904443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 267
Target Start/End: Complemental strand, 11258915 - 11258836
Alignment:
Q  189 aaaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||| ||| ||| | ||| ||||||||| ||||||||||||||||||||||||| ||||| ||||||||    
T  11258915 aaaggctaaagtgcattttcccctctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaatttt 11258836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 195 - 278
Target Start/End: Original strand, 28617926 - 28618009
Alignment:
Q  195 taaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccctaaga 278  Q
    |||||| || |||| | ||||| |||||||||||||||||||||||||||| |||||| |||||  ||||||| ||||||||||    
T  28617926 taaagtacattttttctccctaactttcaaaatcttgcaattttggccccccaagtacaaaaacttcaattttgccccctaaga 28618009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 195 - 266
Target Start/End: Complemental strand, 36451018 - 36450947
Alignment:
Q  195 taaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 266  Q
    ||||||||||||||||||| || ||||||||| ||||||||||||| |||||||||||  |||| |||||||    
T  36451018 taaagtgcacttttcccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaattt 36450947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 191 - 282
Target Start/End: Complemental strand, 11938890 - 11938798
Alignment:
Q  191 aggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaatta 282  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||||||||| | |||||||| |||||  | |||||| |||||||||||||||    
T  11938890 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttggtctcctaagta-caaaaatataattttgcccccctaagaatta 11938798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 18868923 - 18869000
Alignment:
Q  191 aggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||| |||||||| |||||| ||||||||| ||||||||||||||| ||||| ||| ||||| ||||||||    
T  18868923 aggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggcctcctaaatacaaaaactacaatttt 18869000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 267
Target Start/End: Complemental strand, 18300831 - 18300749
Alignment:
Q  184 aaaataaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||| | |||||| |||||||||||||| || |||||| || |||||||||||| |||||||||||| ||||| ||||||||    
T  18300831 aaaatataagctaaattgcacttttccccc-taactttcataaacttgcaattttgaccccctaagtacaaaaactacaatttt 18300749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 18797245 - 18797323
Alignment:
Q  191 aggctaaagtgcacttttcc--cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||  |||||| ||||||||| |||||||||||| |||| ||||||  ||||| ||||||||    
T  18797245 aggctaaagtgcacttttccaccccctaactttcaaaaacttgcaattttgaccccttaagtattaaaactacaatttt 18797323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 21837356 - 21837298
Alignment:
Q  190 aaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaag 249  Q
    ||||||||||||||||||| |||| || ||||||||| ||||||||||||||||||||||    
T  21837356 aaggctaaagtgcactttttcccc-taactttcaaaaacttgcaattttggccccctaag 21837298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 23869636 - 23869560
Alignment:
Q  191 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||||| |||| | |||| |||| ||||||||||||||||||||| ||| ||||| ||||||||    
T  23869636 aggctaaagtgcacttttccacccttaactttaaaaa-cttgcaattttggccccctaaatacaaaaactacaatttt 23869560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 41879314 - 41879237
Alignment:
Q  191 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||| ||||||| |||||| |  |||||||| |||||||||||||||||||||||||  |||| ||||||||    
T  41879314 aggctaaagtacactttttcccccttaattttcaaaaacttgcaattttggccccctaagtacataaactacaatttt 41879237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 257
Target Start/End: Original strand, 1033212 - 1033275
Alignment:
Q  193 gctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaa 257  Q
    ||||||||| |||||||||||||| |||| |||| ||||||||||||| ||||||| ||||||||    
T  1033212 gctaaagtgtacttttcccccctaacttttaaaaacttgcaattttgg-cccctaaataccaaaa 1033275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 18299373 - 18299449
Alignment:
Q  192 ggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||| ||| || ||||||||| ||| ||||||||||| ||||||||  ||||| ||||||||    
T  18299373 ggctaaagtgcacttttccacccgtaactttcaaaaactttcaattttggccacctaagtataaaaactacaatttt 18299449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 267
Target Start/End: Original strand, 32739615 - 32739699
Alignment:
Q  184 aaaataaaggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||| | ||||   |||||| ||||||||| ||||||||||||||||| || |||| ||||| ||||||||    
T  32739615 aaaataaaggctaaagtgtattttttttcccctaactttcaaaaacttgcaattttggccccttatgtacaaaaactacaatttt 32739699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 41878092 - 41878170
Alignment:
Q  192 ggctaaagtgcacttttcccccctatctttcaaaatct---tgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||| ||||| || ||||||||| ||   |||||||||||||||||||||||  |||| ||||||||    
T  41878092 ggctaaagtgcactttccccccttaactttcaaaaactatttgcaattttggccccctaagtacagaaactacaatttt 41878170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 267
Target Start/End: Original strand, 13030293 - 13030365
Alignment:
Q  193 gctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||| || ||||||||| |||| |||||||| ||||||||||| ||||  ||||||||    
T  13030293 gctaaagtgcacttttccccc-taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt 13030365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 267
Target Start/End: Original strand, 13567970 - 13568048
Alignment:
Q  190 aaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||| ||||||| ||||||||||  |||  |||||||| ||||||||||||||||||||| ||| ||||| ||||||||    
T  13567970 aaggttaaagtgtacttttccccttctaagtttcaaaaacttgcaattttggccccctaaatacaaaaactacaatttt 13568048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 267
Target Start/End: Complemental strand, 22588056 - 22587979
Alignment:
Q  190 aaggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||| |||||||| | || ||||||||| ||||||||||||| |||||| |||| ||||| ||||||||    
T  22588056 aaggctaaagtgcatttttcccctcataactttcaaaaacttgcaattttgg-cccctatgtacaaaaactacaatttt 22587979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 267
Target Start/End: Original strand, 24475223 - 24475300
Alignment:
Q  190 aaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||| |||  | |||||| ||||||||| |||| |||||| ||||||||||||  ||||| ||||||||    
T  24475223 aaggctaaagtgcgcttccctcccctaactttcaaaaacttgtaatttttgccccctaagtataaaaactacaatttt 24475300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 30714274 - 30714331
Alignment:
Q  191 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||||||||||||||| |||||||| ||| ||||| |||| ||||||||||||||    
T  30714274 aggctaaagtgcacttttcgccccctatgttttaaaatgttgcgattttggcccccta 30714331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 38839241 - 38839318
Alignment:
Q  191 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||| |||| |||||| |  |||||||| ||||||||||| ||||||||| ||| ||||| ||||||||    
T  38839241 aggctaaagtgcattttttcccccttaattttcaaaaacttgcaattttagccccctaactacaaaaactacaatttt 38839318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 9787861 - 9787805
Alignment:
Q  192 ggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||| | |||||||| |||||||| ||||||||| |||||||||||||||||||    
T  9787861 ggctaaactacacttttcgccccctatgtttcaaaatattgcaattttggcccccta 9787805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 24476943 - 24476869
Alignment:
Q  192 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||| ||||||||||| ||||| | |||| |||| |||| |||||||| ||||||||||| ||||| ||||||||    
T  24476943 ggctagagtgcactttttcccccaa-cttttaaaaacttgtaattttggtcccctaagtacaaaaactacaatttt 24476869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 247
Target Start/End: Complemental strand, 2986996 - 2986934
Alignment:
Q  186 aataaaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||| ||||||||||||||||||| | | |||| ||||||||| |||| ||||||||||||||    
T  2986996 aatataggctaaagtgcacttttcactctctatgtttcaaaatgttgcgattttggcccccta 2986934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 251
Target Start/End: Original strand, 7898694 - 7898751
Alignment:
Q  195 taaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagta 251  Q
    ||||||||||||||| ||||| | ||||||||| ||||||||||| ||| ||||||||    
T  7898694 taaagtgcacttttctccccttaactttcaaaaacttgcaatttttgcctcctaagta 7898751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 267
Target Start/End: Complemental strand, 810854 - 810806
Alignment:
Q  219 tttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||| |||||||||||||||||||  |||| ||||| ||||||||    
T  810854 tttcaaaaacttgcaattttggccccctgtgtacaaaaactacaatttt 810806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 20347529 - 20347489
Alignment:
Q  181 aataaaataaaggctaaagtgcacttttcccccctatcttt 221  Q
    |||| |||||||||| || ||||||||||||||||||||||    
T  20347529 aatataataaaggcttaattgcacttttcccccctatcttt 20347489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 21837070 - 21837121
Alignment:
Q  192 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccc 244  Q
    ||||||||||||||||| || | || ||||||||| |||||||||||||||||    
T  21837070 ggctaaagtgcactttttcctc-taactttcaaaaacttgcaattttggcccc 21837121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 38716496 - 38716440
Alignment:
Q  192 ggctaaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||| |||||||||| || ||||| ||||||||| ||||||||||| |||||||    
T  38716496 ggctaaactgcacttttcacctcctatgtttcaaaatgttgcaattttgacccccta 38716440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 30338522 - 30338459
Alignment:
Q  16 cttctccatatatataggggaaagacttccaattaccaattgacgaaaatacccctataagggc 79  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  30338522 cttctccatatatataagggaaagacttccaattaccaattgacgaaaatacccctataagggc 30338459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 185 - 252
Target Start/End: Complemental strand, 12353467 - 12353400
Alignment:
Q  185 aaataaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtac 252  Q
    ||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||    
T  12353467 aaataaaggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttggccccctaagtac 12353400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 191 - 273
Target Start/End: Original strand, 5513981 - 5514063
Alignment:
Q  191 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccc 273  Q
    |||||||||||||||||| ||||||| ||||||||| ||| ||||||||||||||||||||| ||||| |||||||| |||||    
T  5513981 aggctaaagtgcacttttaccccctaactttcaaaaacttccaattttggccccctaagtacaaaaactacaattttgccccc 5514063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 10006344 - 10006420
Alignment:
Q  192 ggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||| |||||| ||||||||    
T  10006344 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaatttt 10006420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 201 - 267
Target Start/End: Original strand, 18970920 - 18970986
Alignment:
Q  201 gcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||    
T  18970920 gcacttttcccccctaactttcaaaatctttcaattttggccccctaagtacaaaaactacaatttt 18970986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 201 - 267
Target Start/End: Original strand, 18978029 - 18978095
Alignment:
Q  201 gcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||    
T  18978029 gcacttttcccccctaactttcaaaatctttcaattttggccccctaagtacaaaaactacaatttt 18978095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 10007865 - 10007788
Alignment:
Q  191 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||   |||||||||||||    
T  10007865 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaatttt 10007788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 187 - 267
Target Start/End: Complemental strand, 22221470 - 22221389
Alignment:
Q  187 ataaaggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||||||||| |||||| ||||||||| |||||||||||| |||||||||||  ||||| ||||||||    
T  22221470 ataaaggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaatttt 22221389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 187 - 267
Target Start/End: Complemental strand, 22227812 - 22227731
Alignment:
Q  187 ataaaggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||||||||| |||||| ||||||||| |||||||||||| |||||||||||  ||||| ||||||||    
T  22227812 ataaaggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaatttt 22227731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 29968434 - 29968364
Alignment:
Q  195 taaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatt 265  Q
    ||||||||||||||||||| || |||| |||| ||||||||||||||||||||||||| ||||| ||||||    
T  29968434 taaagtgcacttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaatt 29968364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 32207435 - 32207350
Alignment:
Q  181 aataaaataaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||| ||||||||||||||||||| |||||||| | ||||||| |||||||||||| | |||||||||| ||||| ||||||||    
T  32207435 aataaaaaaaaggctaaagtgcacttt-cccccctaaccttcaaaaacttgcaattttgacgccctaagtacaaaaactacaatttt 32207350  T

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Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 190 - 278
Target Start/End: Complemental strand, 5003199 - 5003111
Alignment:
Q  190 aaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtac-caaaaccacaattttcccccctaaga 278  Q
    |||||||||| ||||||| |||||||| |||||||||||||||||||||   |||||||||||  ||||||||||||||  |||||||||    
T  5003199 aaggctaaagcgcacttt-cccccctaactttcaaaatcttgcaattttaaacccctaagtactaaaaaccacaattttgtcccctaaga 5003111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 278
Target Start/End: Complemental strand, 24488762 - 24488693
Alignment:
Q  209 cccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccctaaga 278  Q
    |||||||| ||||||||| ||||||||||||||||||||| || |||||| |||||||| |||| |||||    
T  24488762 cccccctaactttcaaaaacttgcaattttggccccctaaatatcaaaacaacaattttgccccgtaaga 24488693  T

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Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 24122882 - 24122958
Alignment:
Q  191 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||| |||||||||||| |||| ||||  ||||||||||| |||||||||||| ||||| | ||||||    
T  24122882 aggctaaagtgcatttttcccccctaactttaaaaaatttgcaattttgaccccctaagtacaaaaactataatttt 24122958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 267
Target Start/End: Complemental strand, 38980153 - 38980069
Alignment:
Q  184 aaaataaaggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||| |||||||||||||||||||||||||| || |||||||||  |||| |||||||||||| | |||  ||||||||||||||    
T  38980153 aaaaaaaaggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaatttt 38980069  T

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Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 267
Target Start/End: Complemental strand, 39011250 - 39011166
Alignment:
Q  184 aaaataaaggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||| |||||||||||||||||||||||||| || |||||||||  |||| |||||||||||| | |||  ||||||||||||||    
T  39011250 aaaaaaaaggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaatttt 39011166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 267
Target Start/End: Complemental strand, 1824174 - 1824103
Alignment:
Q  197 aagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||| ||||||||| ||| ||||||||| ||||||||||||| ||||||||||| ||||| ||||||||    
T  1824174 aagtgcatttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaatttt 1824103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 267
Target Start/End: Complemental strand, 1858619 - 1858548
Alignment:
Q  197 aagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||| ||||||||| ||| ||||||||| ||||||||||||| ||||||||||| ||||| ||||||||    
T  1858619 aagtgcatttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaatttt 1858548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 267
Target Start/End: Complemental strand, 18979220 - 18979145
Alignment:
Q  193 gctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||||||| || ||||||| | ||||||||||||||||||||| ||  ||||| ||||||||    
T  18979220 gctaaagtgcacttttccccccctaactttcaacaacttgcaattttggccccctaaatataaaaactacaatttt 18979145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 267
Target Start/End: Original strand, 12351919 - 12351997
Alignment:
Q  190 aaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||| ||| ||||||| | |||||||||  ||||||||||| |||||||||||| ||||| ||||||||    
T  12351919 aaggctaaagtgcattttcccccccttaactttcaaaaatttgcaattttgaccccctaagtacaaaaactacaatttt 12351997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 282
Target Start/End: Original strand, 11287779 - 11287868
Alignment:
Q  195 taaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaatta 282  Q
    |||||||||||||| | |||||| |||| |||| |||||||||||||||| ||||||||  |||| ||||||||  ||||||||||||||    
T  11287779 taaagtgcactttttcacccctaactttaaaaaacttgcaattttggcccactaagtacagaaactacaattttggccccctaagaatta 11287868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 24483143 - 24483200
Alignment:
Q  192 ggctaaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggccccctaa 248  Q
    ||||||||||||||||||||| ||||  |||||||| |||||||||||||||||||||    
T  24483143 ggctaaagtgcacttttcccctcctaattttcaaaaacttgcaattttggccccctaa 24483200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 32968455 - 32968532
Alignment:
Q  191 aggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||||||||| || |||||||||  |||| |||||||||||| | |||  ||||||||||||||    
T  32968455 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaatttt 32968532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 187 - 266
Target Start/End: Original strand, 1823547 - 1823627
Alignment:
Q  187 ataaaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 266  Q
    ||||||||||||||| |||||| |||||| | |||| |||| |||||||||||| ||| |||||||| ||||| |||||||    
T  1823547 ataaaggctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaattt 1823627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 187 - 266
Target Start/End: Original strand, 1857992 - 1858072
Alignment:
Q  187 ataaaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 266  Q
    ||||||||||||||| |||||| |||||| | |||| |||| |||||||||||| ||| |||||||| ||||| |||||||    
T  1857992 ataaaggctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaattt 1858072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 19391387 - 19391443
Alignment:
Q  191 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||||||| |||||||||| ||||||| ||||||||| |||||||||||| ||||||    
T  19391387 aggctaaactgcacttttcgcccctatgtttcaaaatgttgcaattttggtccccta 19391443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 32974037 - 32973961
Alignment:
Q  192 ggctaaagtgcactttt-cccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||| |||||||| |||||||||  |||| |||||||||||| | |||  ||||||||||||||    
T  32974037 ggctaaagtgcactttttcccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaatttt 32973961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 38974795 - 38974871
Alignment:
Q  192 ggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||||| || |||||||||  |||| |||||||||||| | |||  ||||||||||||||    
T  38974795 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaatttt 38974871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 39005893 - 39005969
Alignment:
Q  192 ggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||||| || |||||||||  |||| |||||||||||| | |||  ||||||||||||||    
T  39005893 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaatttt 39005969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 5192270 - 5192328
Alignment:
Q  190 aaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||||| | |||||||| |||||||| ||||||||| |||||||||||||||||||    
T  5192270 aaggctaaacttcacttttcgccccctatgtttcaaaatgttgcaattttggcccccta 5192328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 4518868 - 4518925
Alignment:
Q  191 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||||||||||||||| |||||||| ||| ||||| |||| ||||||||||||||    
T  4518868 aggctaaagtgcacttttcgccccctatattttaaaatattgcgattttggcccccta 4518925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 4807599 - 4807656
Alignment:
Q  191 aggctaaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||||||| |||||||||| || ||||| ||||||||| |||||||||||||||||||    
T  4807599 aggctaaactgcacttttcgcctcctatgtttcaaaatgttgcaattttggcccccta 4807656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 267
Target Start/End: Original strand, 8388462 - 8388538
Alignment:
Q  190 aaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||| |||||||| |||| ||||  |||||||||| |||||||| |||| ||||| | ||||||    
T  8388462 aaggctaaagtgcacttt-cccccctaacttttaaaaagttgcaattttagccccctatgtacaaaaactataatttt 8388538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 11456637 - 11456694
Alignment:
Q  191 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||||||||||||||| |||||||  ||||||||  |||||||||||||||||||    
T  11456637 aggctaaagtgcacttttctccccctaattttcaaaaatttgcaattttggcccccta 11456694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 257
Target Start/End: Complemental strand, 23170098 - 23170034
Alignment:
Q  192 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaa 257  Q
    |||||||||||| ||||||||||||  |||||||| ||||||||||||  ||||||||||| ||||    
T  23170098 ggctaaagtgca-ttttcccccctaattttcaaaaacttgcaattttgatcccctaagtacaaaaa 23170034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 44147275 - 44147218
Alignment:
Q  191 aggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||||||||||||||| |||| ||| ||||||||| |||| ||||||||||||||    
T  44147275 aggctaaagtgcacttttcgccccatatgtttcaaaatattgcgattttggcccccta 44147218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 3819489 - 3819541
Alignment:
Q  192 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccc 244  Q
    |||||||||||| ||||||||| ||  ||||||||| ||||||||||||||||    
T  3819489 ggctaaagtgcatttttcccccttaagtttcaaaatgttgcaattttggcccc 3819541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 11288962 - 11288902
Alignment:
Q  191 aggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaa-ttttggccccctaag 249  Q
    |||||||||||||||||| | |||||| ||||||||| ||||||| |||||||||||||||    
T  11288962 aggctaaagtgcactttttcacccctaactttcaaaaacttgcaatttttggccccctaag 11288902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 22220388 - 22220464
Alignment:
Q  192 ggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||||||| ||| |||| |||  |||||||||||| ||||||| |||  ||||| ||||||||    
T  22220388 ggctaaagtgcacttttccccctctaactttaaaatacttgcaattttgaccccctatgtataaaaactacaatttt 22220464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 45114620 - 45114568
Alignment:
Q  189 aaaggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttgg 240  Q
    ||||||| |||||||||||||| |||||| ||||||||| |||||||||||||    
T  45114620 aaaggctgaagtgcacttttccgcccctaactttcaaaaacttgcaattttgg 45114568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 127
Target Start/End: Complemental strand, 30338441 - 30338410
Alignment:
Q  96 tggacatggattgtcctatatagtttagtaga 127  Q
    ||||||||||||||||||||||||||||||||    
T  30338441 tggacatggattgtcctatatagtttagtaga 30338410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 267
Target Start/End: Original strand, 30335637 - 30335715
Alignment:
Q  190 aaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||| |||||| |||| | |||| |||| |||||||||||||| | |||||||| ||||  ||||||||    
T  30335637 aaggctaaagtgcatttttccacccttaacttttaaaaacttgcaattttggctcgctaagtacaaaaattacaatttt 30335715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 24123997 - 24123923
Alignment:
Q  191 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||| |||||  ||||| || ||||||||| ||||||||||||||| | ||||||| ||||  ||||||||    
T  24123997 aggctaaagtacactt--cccccgtaactttcaaaaacttgcaattttggcctcttaagtactaaaattacaatttt 24123923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 33895678 - 33895621
Alignment:
Q  191 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||||||| |||||||||| |||||||| ||| ||||| |||||||||||| ||||||    
T  33895678 aggctaaactgcacttttcgccccctatattttaaaatgttgcaattttggtccccta 33895621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 247
Target Start/End: Original strand, 36249547 - 36249608
Alignment:
Q  187 ataaaggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggcccccta 247  Q
    |||| ||||||||||||||||||||||| ||  ||||||||  |||||||||||||| ||||    
T  36249547 ataatggctaaagtgcacttttccccccttaagtttcaaaaagttgcaattttggcctccta 36249608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 5514371 - 5514295
Alignment:
Q  191 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||  ||||||  ||| |||| ||||||||||| |||  |||| ||| ||||| ||||||||    
T  5514371 aggctaaagtgcacttttatcccctaattttaaaaaacttgcaattttagccttctaaatacaaaaactacaatttt 5514295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 191 - 284
Target Start/End: Original strand, 17469 - 17564
Alignment:
Q  191 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattatc 284  Q
    |||||||||||||||||| |||||| | |||| |||| ||||||||||||||||||||||||| ||||| ||||||||  ||||| ||||||||||    
T  17469 aggctaaagtgcactttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccccaagaattatc 17564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 18877 - 18801
Alignment:
Q  192 ggctaaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||| ||| |||| |||| ||||  |||||||||||| |||||| |||| ||||| | ||||||    
T  18877 ggctaaagtgcactttttccctcctaacttttaaaaatttgcaattttggtcccctaggtacaaaaactataatttt 18801  T

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Target: scaffold0294 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 274
Target Start/End: Complemental strand, 5540 - 5456
Alignment:
Q  191 aggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccct 274  Q
    |||||||||||||||||||||||| ||  |||||||| |||||||||||| |||| ||||||| ||||| |||||||| ||||||    
T  5540 aggctaaagtgcacttttccccccctaattttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttgccccct 5456  T

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Target: scaffold0294; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 273
Target Start/End: Original strand, 4441 - 4524
Alignment:
Q  191 aggctaaagtgcac-ttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccc 273  Q
    |||||||||||||| ||||||||||||  |||||||| ||| ||||||| ||||| ||||||| ||||  |||||||| |||||    
T  4441 aggctaaagtgcacattttcccccctaattttcaaaaacttacaattttagccccttaagtacaaaaattacaattttaccccc 4524  T

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Target: scaffold0186 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 264
Target Start/End: Original strand, 23081 - 23152
Alignment:
Q  192 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaat 264  Q
    |||||||||||||||||||||| || ||||||||| |||||||||||| ||| |||||||||||||| |||||    
T  23081 ggctaaagtgcacttttccccc-taactttcaaaaacttgcaattttgtccctctaagtaccaaaacaacaat 23152  T

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Target: scaffold0186; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 275
Target Start/End: Complemental strand, 23992 - 23907
Alignment:
Q  191 aggctaaagtgcacttttccc-ccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttccccccta 275  Q
    ||||||||||||||||||  | ||||| ||||||||| |||||||||||||| |||||| || |||||| |||| ||| |||||||    
T  23992 aggctaaagtgcacttttttctccctaactttcaaaaacttgcaattttggctccctaaatatcaaaacaacaacttttcccccta 23907  T

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Target: scaffold0320 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 19487 - 19564
Alignment:
Q  191 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||| ||||||||||| |  |||||||| ||||||||||||||||||||||||  ||||| ||||||||    
T  19487 aggctaaagtgcatttttccccccttaattttcaaaaccttgcaattttggccccctaagtataaaaactacaatttt 19564  T

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Target: scaffold0632 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 3409 - 3333
Alignment:
Q  191 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||||||||||  ||||||||| ||| |||||||| |||| || |||| ||||| | ||||||    
T  3409 aggctaaagtgcacttttccccccttactttcaaaaacttacaattttgaccccataggtacaaaaactataatttt 3333  T

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Target: scaffold0419 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 2961 - 3017
Alignment:
Q  192 ggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||||||||||||||||| |||||||| ||||||||| |||| ||||||||||||||    
T  2961 ggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggcccccta 3017  T

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Target: scaffold0227 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 220 - 144
Alignment:
Q  192 ggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||||| || |||||||||  |||| |||||||||||| | |||  ||||||||||||||    
T  220 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaatttt 144  T

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Target: scaffold0112 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 37148 - 37223
Alignment:
Q  192 ggctaaagtgcacttttcccccctatctttcaaaatctt-gcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||||||||| ||||||| ||||  || ||||||||| |||||||||||| ||||| ||||||||    
T  37148 ggctaaagtgcacttttccccc-tatcttttaaaaaatttgcaattttgaccccctaagtacaaaaacaacaatttt 37223  T

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Target: scaffold0019 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 267
Target Start/End: Complemental strand, 61568 - 61484
Alignment:
Q  184 aaaataaaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||| ||| |||||||||||||||||| |||| |  |||||||| ||||||||||| ||||||||||||| ||||| | ||||||    
T  61568 aaaaaaaaagctaaagtgcacttttcctcccttaattttcaaaaacttgcaattttagccccctaagtacaaaaactataatttt 61484  T

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Target: scaffold0019; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 60090 - 60166
Alignment:
Q  192 ggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||| || ||| |||| |||| |||||||||||| ||||||| |||  ||||| ||||||||    
T  60090 ggctaaagtgcacttttcctcctctaacttttaaaaacttgcaattttgaccccctatgtataaaaactacaatttt 60166  T

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Target: scaffold0369 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 267
Target Start/End: Original strand, 13181 - 13267
Alignment:
Q  180 aaataaaataaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||||||||||| ||||||| |||| ||||  |||  |||||| || |||| |||| ||||| ||||||||    
T  13181 aaataaaataaaggctaaagtgcactttt-ccccctaactttgaaaaagttgtgattttgacctcctatgtacgaaaactacaatttt 13267  T

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Target: scaffold0093 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 267
Target Start/End: Complemental strand, 2564 - 2490
Alignment:
Q  193 gctaaagtgcacttttcccccctatctttcaaaat-cttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||| || |||||||||  |||||||||||| |||||||||||| ||||| || |||||    
T  2564 gctaaagtgcacttttccccc-taactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccatttt 2490  T

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Target: scaffold0093; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 267
Target Start/End: Complemental strand, 7187 - 7113
Alignment:
Q  193 gctaaagtgcacttttcccccctatctttcaaaat-cttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||||||||| || |||||||||  |||||||||||| |||||||||||| ||||| || |||||    
T  7187 gctaaagtgcacttttccccc-taactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccatttt 7113  T

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Target: scaffold0607 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 2046 - 2104
Alignment:
Q  190 aaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||||| |||||||||| |||||||| ||| ||||| |||||||||||||||||||    
T  2046 aaggctaaactgcacttttcgccccctatgttttaaaatgttgcaattttggcccccta 2104  T

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Target: scaffold0059 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 267
Target Start/End: Complemental strand, 4829 - 4755
Alignment:
Q  193 gctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||||||||||| || ||||| |||| |||| | ||||||||||||||||||| |||  |||| ||||||||    
T  4829 gctaaagtgcactttccctccctaacttttaaaaacatgcaattttggccccctaaatacagaaactacaatttt 4755  T

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Target: scaffold0059; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 251
Target Start/End: Original strand, 3695 - 3735
Alignment:
Q  211 cccctatctttcaaaatcttgcaattttggccccctaagta 251  Q
    |||||| ||||||||| ||||||||||||||||||| ||||    
T  3695 cccctaactttcaaaaacttgcaattttggccccctgagta 3735  T

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Target: scaffold2034 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 233 - 309
Alignment:
Q  192 ggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    |||||||||||||||| ||||||| | |||||||||  |||||||||||| |||||| |||| ||||| | ||||||    
T  233 ggctaaagtgcactttcccccccttaactttcaaaaagttgcaattttggtcccctatgtacaaaaactataatttt 309  T

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Target: scaffold0045 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 49185 - 49109
Alignment:
Q  192 ggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 267  Q
    ||||||| ||||||||||| |||| | |||| |||| ||||||||||||||| ||||||||  ||||| ||||||||    
T  49185 ggctaaattgcacttttccacccttaacttttaaaaacttgcaattttggcctcctaagtattaaaactacaatttt 49109  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 62125 - 62069
Alignment:
Q  189 aaaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccc 244  Q
    |||||||||| |||| ||||| |||||||| ||||||||| ||||||||||||||||    
T  62125 aaaggctaaactgcatttttcaccccctatgtttcaaaatgttgcaattttggcccc 62069  T

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Target: scaffold0060 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 66479 - 66424
Alignment:
Q  190 aaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccc 244  Q
    ||||||||| |||||||||| |||||||| ||||||||| ||| ||||||||||||    
T  66479 aaggctaaactgcacttttcgccccctatgtttcaaaatgttgtaattttggcccc 66424  T

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Target: scaffold1303 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 1438 - 1495
Alignment:
Q  191 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||||||| ||||||||||| ||| |||| |||| |||||||||||| |||||||    
T  1438 aggctaaagtgtacttttccccctctaactttaaaaaacttgcaattttgacccccta 1495  T

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Target: scaffold0179 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 5649 - 5706
Alignment:
Q  191 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    |||||||| |||||||||| |||||||| ||||||||| || ||||||||||| ||||    
T  5649 aggctaaactgcacttttcgccccctatgtttcaaaatgttacaattttggcctccta 5706  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 43815 - 43880
Alignment:
Q  183 taaaataaaggctaaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||||||| |||| |||||||||| || ||||  ||||||||| || ||||||||||||||||    
T  43815 taaaataaaggttaaactgcacttttcgcctcctaagtttcaaaatgtttcaattttggcccccta 43880  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 49535 - 49478
Alignment:
Q  191 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 247  Q
    ||||||||||||||||||| |||| || |||| ||||  |||||||||||||||||||    
T  49535 aggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggcccccta 49478  T

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Target: scaffold0049 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 7527 - 7495
Alignment:
Q  181 aataaaataaaggctaaagtgcacttttccccc 213  Q
    |||||||||||||||||||||||||| ||||||    
T  7527 aataaaataaaggctaaagtgcacttgtccccc 7495  T

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