View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8521A_high_56 (Length: 221)
Name: NF8521A_high_56
Description: NF8521A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8521A_high_56 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 625592 - 625372
Alignment:
| Q |
1 |
aatcacttttattttaagtatcgatatatagtaacaaattatcattccatgcacactagcattgtatagaattgaataacactgtttatgtaagcataac |
100 |
Q |
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| T |
625592 |
aatcacttttattttaagtattgatatatagtaacaaattatcattccatgcacactagcattgtatagaattgaataacattgttcatgtaagcataac |
625493 |
T |
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| Q |
101 |
ttagttggtagaaatattgcaatatgtaggagttggagttacaatccgtatttctcacttatttgtcttaaggagtaaaattctgacaactaaattactt |
200 |
Q |
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| T |
625492 |
ttagttggtagaaatattgtaatatgtaggagttggagttacaatccgtatttctcacttatttatcttaaggagtaaaattctgacaactaaattactt |
625393 |
T |
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| Q |
201 |
gacaaaaagaattgaataaca |
221 |
Q |
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||||||||||||||||||||| |
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| T |
625392 |
gacaaaaagaattgaataaca |
625372 |
T |
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