View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8521A_low_141 (Length: 287)
Name: NF8521A_low_141
Description: NF8521A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8521A_low_141 |
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Alignment Details
Target: chr7 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 49086303 - 49086584
Alignment:
| Q |
1 |
aaggtgtttgcttgctcctaaattccatttgaagtatgaacaattttgctctctttgcaaataaataaatggtgtaaaaattgaatgtgacgtgttgtgg |
100 |
Q |
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| T |
49086303 |
aaggtgtttgcttgctcctaaattccatttgaagtatgaacaattttgctctctttgcaaataaataaatggtgtaaaaattgaatgtgacgtgttgtgg |
49086402 |
T |
|
| Q |
101 |
gatctgtcgaagcatgagaaccaaacatgtgtagaactatactaaacacacataatcaatagtgagcaaaccaattttcattgaatgcagaaactgttgg |
200 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
49086403 |
gatctggcgaagcatgagaaccaaacatgtgtagaactatactaaacacacataatcaatagtgagcaaaccaattttcattgcatgcagaaactgttgg |
49086502 |
T |
|
| Q |
201 |
ttttataagtctataagtttatccaaatgtcggtgaaacgactcgatctaagccacgtctccttcattccatcgtcccttct |
282 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |
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| T |
49086503 |
ttttataagtctataagtttatccaaatgtcggtgaaacgacccgatctaagccacgtctccttcattccattgtcccttct |
49086584 |
T |
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