View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8521A_low_143 (Length: 285)
Name: NF8521A_low_143
Description: NF8521A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8521A_low_143 |
 | |
|
| [»] scaffold0596 (1 HSPs) |
| | |
|
| [»] scaffold0035 (1 HSPs) |
| | |
|
| [»] scaffold0045 (1 HSPs) |
| |
|
| [»] scaffold0096 (1 HSPs) |
| | |
|
| [»] scaffold0157 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 53 - 282
Target Start/End: Complemental strand, 43071496 - 43071267
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43071496 |
ttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
43071397 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
252 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43071396 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
43071297 |
T |
|
| Q |
253 |
ctcaaattcccaaattgactccacacttat |
282 |
Q |
| |
|
||| |||||||||||||||||||||||||| |
|
|
| T |
43071296 |
ctccaattcccaaattgactccacacttat |
43071267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 53 - 282
Target Start/End: Original strand, 1262095 - 1262324
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
1262095 |
ttatatctaatctttgttaacattgctaatgactttgcaaaccctaaacctaaatggttttggctccaaaacaagggaagccgttggatctcatcatttg |
1262194 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
252 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1262195 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
1262294 |
T |
|
| Q |
253 |
ctcaaattcccaaattgactccacacttat |
282 |
Q |
| |
|
||| |||||||||||||||||||||||||| |
|
|
| T |
1262295 |
ctccaattcccaaattgactccacacttat |
1262324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 53 - 282
Target Start/End: Complemental strand, 48849921 - 48849692
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||| ||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
48849921 |
ttatatctaatctttgttaacattgctaatgactttgtaaatcctaaacctaaatggttttggctccaaaacaagggattttgttggatctcatcatttg |
48849822 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
252 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48849821 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
48849722 |
T |
|
| Q |
253 |
ctcaaattcccaaattgactccacacttat |
282 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
48849721 |
ctcaaattcccaaattgactccacacttat |
48849692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 53 - 282
Target Start/End: Complemental strand, 26910095 - 26909870
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
|||||||||||||||||||||||||| ||| | ||||||||| ||||||||||||| ||||||||||||||||||||| || |||||||| |||||||| |
|
|
| T |
26910095 |
ttatatctaatctttgttaacattgctaataactttgcaaaccctaaacctaaatggatttggctccaaaacaagggagaccattggatcttatcatttg |
26909996 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
252 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |
|
|
| T |
26909995 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttattcaagttttgactc----attatc |
26909900 |
T |
|
| Q |
253 |
ctcaaattcccaaattgactccacacttat |
282 |
Q |
| |
|
||| |||||||| ||||||||||||||||| |
|
|
| T |
26909899 |
ctccaattcccagattgactccacacttat |
26909870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 22007347 - 22007416
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaa |
122 |
Q |
| |
|
||||||||||| |||||||||||||| ||||| || |||||| |||| ||||||||||||||||||||| |
|
|
| T |
22007347 |
ttatatctaatttttgttaacattgctaatgactttacaaaccctaaatctaaatggttttggctccaaa |
22007416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 53 - 282
Target Start/End: Complemental strand, 23349094 - 23348865
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23349094 |
ttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
23348995 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
252 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23348994 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
23348895 |
T |
|
| Q |
253 |
ctcaaattcccaaattgactccacacttat |
282 |
Q |
| |
|
||| |||||||||||||||||||||||||| |
|
|
| T |
23348894 |
ctccaattcccaaattgactccacacttat |
23348865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 57 - 282
Target Start/End: Original strand, 12741699 - 12741924
Alignment:
| Q |
57 |
atctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttggcta |
156 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
12741699 |
atctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaaaggaggccgttggatctcatcatttggcta |
12741798 |
T |
|
| Q |
157 |
agcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatcctca |
256 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12741799 |
agcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatcctcc |
12741898 |
T |
|
| Q |
257 |
aattcccaaattgactccacacttat |
282 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
12741899 |
aattcccaaattgactccacacttat |
12741924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 53 - 282
Target Start/End: Complemental strand, 18355427 - 18355198
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
|||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
18355427 |
ttatatttaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggaggtcgttggatctcatcatttg |
18355328 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
252 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18355327 |
gctaagcatgcatctcatcctttaatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
18355228 |
T |
|
| Q |
253 |
ctcaaattcccaaattgactccacacttat |
282 |
Q |
| |
|
||| |||||||||||||||||||||||||| |
|
|
| T |
18355227 |
ctccaattcccaaattgactccacacttat |
18355198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 53 - 282
Target Start/End: Complemental strand, 10329006 - 10328782
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||| || ||||||||||||||||||||||||||||||||| |
|
|
| T |
10329006 |
ttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaattgttttggttctaaaacaagggaggccgttggatctcatcatttg |
10328907 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcc-tttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattat |
251 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10328906 |
gctaagcatgcatctcatccttttgatctaatctgagtcaaatttgaaaatttg------atttcctatgcacttatccaagttttgactcattaattat |
10328813 |
T |
|
| Q |
252 |
cctcaaattcccaaattgactccacacttat |
282 |
Q |
| |
|
|||| |||||||||||||||||||||||||| |
|
|
| T |
10328812 |
cctccaattcccaaattgactccacacttat |
10328782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 53 - 220
Target Start/End: Complemental strand, 1616028 - 1615862
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
||||||| ||||||||||||||||| ||||| ||| || | ||||| |||||||||||| |||||||| |||||||| ||||||||| ||||||||| |
|
|
| T |
1616028 |
ttatatccaatctttgttaacattgttaatgactttgtaaccattaaatctaaatggtttttgctccaaa-caagggagatcgttggatcgcatcatttg |
1615930 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctat |
220 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |
|
|
| T |
1615929 |
gctaagcatgcatctcatcctttgatctaatttgagtcaaactttcaaatttgatgtatatttcctat |
1615862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 224
Target Start/End: Original strand, 24454522 - 24454693
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
|||||||||||||| |||||||||| || |||||||| | ||||||||||| ||| ||| ||||| ||||| |||||||||||||||||||||| |
|
|
| T |
24454522 |
ttatatctaatcttaattaacattgctaagaccattgcaaatcctaaacctaaattttttaggcgccaaa-caaggagggccgttggatctcatcatttg |
24454620 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaatctga-gtcaaattttcaaatttgatgtatatttcctatgcac |
224 |
Q |
| |
|
||| ||| ||||||||||||||||||||||||| ||||| ||||||||||||||| | |||||||||||| |
|
|
| T |
24454621 |
gcttgacattcatctcatcctttgatctaatctgacttcaaactttcaaatttgatgtctttttcctatgcac |
24454693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 214; Significance: 1e-117; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 53 - 282
Target Start/End: Complemental strand, 30442661 - 30442432
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30442661 |
ttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
30442562 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
252 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
30442561 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttttccaagttttgactcattaattatc |
30442462 |
T |
|
| Q |
253 |
ctcaaattcccaaattgactccacacttat |
282 |
Q |
| |
|
||| |||||||||||||||||||||||||| |
|
|
| T |
30442461 |
ctccaattcccaaattgactccacacttat |
30442432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 53 - 282
Target Start/End: Complemental strand, 7473603 - 7473374
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7473603 |
ttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcattta |
7473504 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
252 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
7473503 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattagttatc |
7473404 |
T |
|
| Q |
253 |
ctcaaattcccaaattgactccacacttat |
282 |
Q |
| |
|
||| |||||||||||||||||||||||||| |
|
|
| T |
7473403 |
ctccaattcccaaattgactccacacttat |
7473374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 53 - 282
Target Start/End: Original strand, 9043809 - 9044038
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9043809 |
ttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
9043908 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
252 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
9043909 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaatttttaaatttgatgtatatttcctatgcatttatccaagttttgactcattaattatc |
9044008 |
T |
|
| Q |
253 |
ctcaaattcccaaattgactccacacttat |
282 |
Q |
| |
|
||| |||||||||||||||||||||||||| |
|
|
| T |
9044009 |
ctccaattcccaaattgactccacacttat |
9044038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 53 - 242
Target Start/End: Complemental strand, 22009642 - 22009453
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22009642 |
ttatatctaatctttgttaacattgctaatgaatttgcaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
22009543 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactc |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
22009542 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgctcttatccaagttttgactc |
22009453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 57 - 143
Target Start/End: Complemental strand, 26841074 - 26840988
Alignment:
| Q |
57 |
atctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatct |
143 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
26841074 |
atctaatctttgttaacattgctaatgattttgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatct |
26840988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 183
Target Start/End: Complemental strand, 22004570 - 22004441
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||||||| |||||||| || |||| ||| |||| ||||| | |||||||||||||||||||| |
|
|
| T |
22004570 |
ttatatctaatctttgttaacattgctaatgattttgcaaaccctaaacctagatagtttaggcgccaat-caaggtggtccgttggatctcatcatttg |
22004472 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaat |
183 |
Q |
| |
|
||| ||||| ||| ||||||||||||||||| |
|
|
| T |
22004471 |
gctcagcattcatatcatcctttgatctaat |
22004441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 19085500 - 19085422
Alignment:
| Q |
45 |
acatcata-ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaa |
122 |
Q |
| |
|
|||||||| |||||| ||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||| |
|
|
| T |
19085500 |
acatcatacttatatataatctttgttaacattgctaatgactttgcaaaccctaaacctaaatggttttggctccaaa |
19085422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 208; Significance: 1e-114; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 47 - 282
Target Start/End: Complemental strand, 19882231 - 19881996
Alignment:
| Q |
47 |
atcatattatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcat |
146 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
19882231 |
atcatattatatctaatctttgttaacattgctaatgaaattgtaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcat |
19882132 |
T |
|
| Q |
147 |
catttggctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcatta |
246 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
19882131 |
catttggctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaaattttgactcatta |
19882032 |
T |
|
| Q |
247 |
attatcctcaaattcccaaattgactccacacttat |
282 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
19882031 |
attatcctccaattcccaaattgactccacatttat |
19881996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 53 - 282
Target Start/End: Complemental strand, 53973400 - 53973171
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
53973400 |
ttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaatcaagggaggccgttggatctcatcatttg |
53973301 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
252 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
53973300 |
gctaagcctgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaaattttgactcattaattatc |
53973201 |
T |
|
| Q |
253 |
ctcaaattcccaaattgactccacacttat |
282 |
Q |
| |
|
||| ||||| |||||||||||||||||||| |
|
|
| T |
53973200 |
ctccaattctcaaattgactccacacttat |
53973171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 53 - 282
Target Start/End: Original strand, 37982356 - 37982588
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
37982356 |
ttatatctaatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttggctccaaaacaagggagaccgttggatctcatcatttg |
37982455 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgca---cttatccaagttttgactcattaatt |
249 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
37982456 |
gctaagcatgcatctcatcctttaatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacgtcttatccaagttttgactcattaatt |
37982555 |
T |
|
| Q |
250 |
atcctcaaattcccaaattgactccacacttat |
282 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |
|
|
| T |
37982556 |
atcctccaattcccaaattgactccacacttat |
37982588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 53 - 282
Target Start/End: Original strand, 31685084 - 31685313
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
||||||||||||||| |||||||||| ||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
31685084 |
ttatatctaatctttattaacattgctaatgactttgcaaaccctaaacctaaatggttttggctccaaaataagggaggccgttgaatctcatcatttg |
31685183 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
252 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
31685184 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttattcaagttttgactcattaattatc |
31685283 |
T |
|
| Q |
253 |
ctcaaattcccaaattgactccacacttat |
282 |
Q |
| |
|
||| ||||| |||||||||||||||||||| |
|
|
| T |
31685284 |
ctccaattctcaaattgactccacacttat |
31685313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 53 - 217
Target Start/End: Original strand, 17681774 - 17681938
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
17681774 |
ttatatctaatctttgttaacattgttaatgattttgcaaaccctaaacctaaatggttttggctccaaa-caaggggggccgttggatctcatcatttg |
17681872 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaatc-tgagtcaaattttcaaatttgatgtatatttcc |
217 |
Q |
| |
|
| |||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||| |
|
|
| T |
17681873 |
gttaagcatgcatctcatcctttgatctaatcttgagtcaaatttttaaatttaatgtatatttcc |
17681938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 53 - 189
Target Start/End: Original strand, 2549944 - 2550079
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
|||||||||||||| |||||||||| ||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
2549944 |
ttatatctaatcttaattaacattgctaatgactttgcaaaccctaaacctaaatgattttggctccaaaacaagggaggccgttggatct-atcatttg |
2550042 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaatctgagt |
189 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||| |
|
|
| T |
2550043 |
gctaagcatgcatctcatcctttgatttaatctgagt |
2550079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 53 - 183
Target Start/End: Complemental strand, 12538749 - 12538620
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
||||||||||||||||||||| || | ||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
12538749 |
ttatatctaatctttgttaacctttctaatgattttgcaaaccctaaacctaaatggttttggctccaaa-caagggaggccgttggatctcatcatttg |
12538651 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaat |
183 |
Q |
| |
|
|||||||||||||| |||||||||||||||| |
|
|
| T |
12538650 |
gctaagcatgcatcacatcctttgatctaat |
12538620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 53 - 183
Target Start/End: Complemental strand, 24762012 - 24761882
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
|||||||||||| || |||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||| | | |||||||||||||||||||| |
|
|
| T |
24762012 |
ttatatctaatccttcttaacattgctaatgactttgcaaaccctaaacctaaatggttttggctccaaaacaatgctgaccgttggatctcatcatttg |
24761913 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaat |
183 |
Q |
| |
|
||| ||||||||||||||||||||||||||| |
|
|
| T |
24761912 |
gctcagcatgcatctcatcctttgatctaat |
24761882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 53 - 183
Target Start/End: Original strand, 24815922 - 24816052
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
|||||||||||| || |||||||||| ||||| ||||||||| |||||||||||||||||||||||||||| | | |||||||||||||||||||||| |
|
|
| T |
24815922 |
ttatatctaatccttcttaacattgctaatgactttgcaaaccctaaacctaaatggttttggctccaaaacgatgctggccgttggatctcatcatttg |
24816021 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaat |
183 |
Q |
| |
|
||| ||||||||||||||||||||||||||| |
|
|
| T |
24816022 |
gctcagcatgcatctcatcctttgatctaat |
24816052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 183
Target Start/End: Complemental strand, 53027866 - 53027736
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
|||||||||||| || |||||| ||| ||| | || |||||| |||||||||||||||||| |||||||| | | | |||||||||||||||||||| |
|
|
| T |
53027866 |
ttatatctaatccttcttaacactgctaataactttacaaaccctaaacctaaatggttttgactccaaaatgatgctgaccgttggatctcatcatttg |
53027767 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaat |
183 |
Q |
| |
|
||| ||||||||||||||||||||||||||| |
|
|
| T |
53027766 |
gctcagcatgcatctcatcctttgatctaat |
53027736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 183
Target Start/End: Complemental strand, 53352875 - 53352745
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
|||||||||||| || |||||||||| ||||| |||||||| |||||||||| ||||||||||||||||| | | | |||||||||||||||||||| |
|
|
| T |
53352875 |
ttatatctaatccttcttaacattgctaatgactttgcaaactctaaacctaaacggttttggctccaaaacgatgctgaccgttggatctcatcatttg |
53352776 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaat |
183 |
Q |
| |
|
||| || |||||||||||||||||| |||| |
|
|
| T |
53352775 |
gctcagtgtgcatctcatcctttgatttaat |
53352745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 198; Significance: 1e-108; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 53 - 282
Target Start/End: Complemental strand, 33045545 - 33045316
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
33045545 |
ttatatctaatctttgttaacattgctaatgactttgcaaaccctaaacctaaatggttttggctccaaaataagggaggccgttggatctcatcatttg |
33045446 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
252 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33045445 |
gttaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
33045346 |
T |
|
| Q |
253 |
ctcaaattcccaaattgactccacacttat |
282 |
Q |
| |
|
||| |||||||||||||||||||||||||| |
|
|
| T |
33045345 |
ctccaattcccaaattgactccacacttat |
33045316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 53 - 282
Target Start/End: Original strand, 10092519 - 10092734
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10092519 |
ttatatctaatctttgttaacattgttaatgactttgcaaaccctaaatctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
10092618 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
252 |
Q |
| |
|
|||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||| |
|
|
| T |
10092619 |
gctaagcatgcatctcattctt--------------tcaaactttcaaatttgatgtatatttcctatgcacctatccaagttttgattcattagttatc |
10092704 |
T |
|
| Q |
253 |
ctcaaattcccaaattgactccacacttat |
282 |
Q |
| |
|
||| |||| ||||||||||||||||||||| |
|
|
| T |
10092705 |
ctccaatttccaaattgactccacacttat |
10092734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 51 - 187
Target Start/End: Original strand, 8976409 - 8976545
Alignment:
| Q |
51 |
tattatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatt |
150 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||||| || ||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||| ||| |
|
|
| T |
8976409 |
tattatatctaatctttgttaatattgctaatgactttacaaactctaaacctaaatggttttggctccaaaataagggagaccgttggatctcattatt |
8976508 |
T |
|
| Q |
151 |
tggctaagcatgcatctcatcctttgatctaatctga |
187 |
Q |
| |
|
| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
8976509 |
tagctaaacatgcatctcatcctttgatctaatctga |
8976545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 53 - 158
Target Start/End: Original strand, 3065705 - 3065809
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
||||||||||||||||||||||| || ||||| ||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
3065705 |
ttatatctaatctttgttaacatggctaatgactttgcaaaccctaaacctaaatggttttggctcc-aaacaagggagaccgttggatctcatcatttg |
3065803 |
T |
|
| Q |
153 |
gctaag |
158 |
Q |
| |
|
|||||| |
|
|
| T |
3065804 |
gctaag |
3065809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 30908483 - 30908414
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaa |
122 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
30908483 |
ttatatctaatctttgttaacattgctaatgactttgcaaaccctaaatctaaatggttttggctccaaa |
30908414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 16246709 - 16246778
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaa |
122 |
Q |
| |
|
||||||||||||||||| |||||||| ||||| ||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
16246709 |
ttatatctaatctttgtgaacattgctaatgactttgcaaaccctaatcctaaatggttttggctccaaa |
16246778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 4660289 - 4660222
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaa |
121 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||| ||||||||| ||| |||||| | |||||||||||| |
|
|
| T |
4660289 |
ttatatataatctttgttaacattgctaatgactttgcaaaccctaaccctaaa-gtttttggctccaa |
4660222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0596 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0596
Description:
Target: scaffold0596; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 53 - 282
Target Start/End: Original strand, 661 - 890
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |
|
|
| T |
661 |
ttatatctgatctttgttaacattgctaatgaaattgcaaaccctaaacctaaatggttttgactccaaaataagggaggccgttggatctcatcatttg |
760 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
252 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
761 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaaattttgactcattaattatc |
860 |
T |
|
| Q |
253 |
ctcaaattcccaaattgactccacacttat |
282 |
Q |
| |
|
| |||||||||||||||||||||||||| |
|
|
| T |
861 |
attcaattcccaaattgactccacacttat |
890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0035 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0035
Description:
Target: scaffold0035; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 53 - 282
Target Start/End: Original strand, 35070 - 35299
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
35070 |
ttatatctaatctttgttaacattgctaatgactttgcaaaccctaaacctaaatggttttggctccaaaacaagggaggttgttggatctcatcatttg |
35169 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
252 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35170 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
35269 |
T |
|
| Q |
253 |
ctcaaattcccaaattgactccacacttat |
282 |
Q |
| |
|
||| |||||||||||| ||||||||||||| |
|
|
| T |
35270 |
ctccaattcccaaattaactccacacttat |
35299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 194; Significance: 1e-105; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 53 - 282
Target Start/End: Original strand, 5657778 - 5658007
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
||||||||||||||||||||| |||| ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5657778 |
ttatatctaatctttgttaacgttgctaatgactttgcaaaccctaaacctaaatagttttggctccaaaacaagggaggccgttggatctcatcatttg |
5657877 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
252 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5657878 |
gttaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
5657977 |
T |
|
| Q |
253 |
ctcaaattcccaaattgactccacacttat |
282 |
Q |
| |
|
||| |||||||||||||||||||||||||| |
|
|
| T |
5657978 |
ctccaattcccaaattgactccacacttat |
5658007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 53 - 282
Target Start/End: Complemental strand, 14678135 - 14677906
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14678135 |
ttatatctaatctttgttaacattgctaatgactttgaaaaccctaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
14678036 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
252 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14678035 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttaatgtatatttcctatgcacttatccaagttttgactcattaattatc |
14677936 |
T |
|
| Q |
253 |
ctcaaattcccaaattgactccacacttat |
282 |
Q |
| |
|
|| |||||||||||||||||||||||||| |
|
|
| T |
14677935 |
atccaattcccaaattgactccacacttat |
14677906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 53 - 282
Target Start/End: Complemental strand, 31100986 - 31100757
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
31100986 |
ttatatctaatctttgttaacattgctaatgactttgcaaatcctaaacctaaatggttttggctccaaaacaagggaggccgttcgatctcatcatttg |
31100887 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
252 |
Q |
| |
|
| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31100886 |
gttaagcatgtatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
31100787 |
T |
|
| Q |
253 |
ctcaaattcccaaattgactccacacttat |
282 |
Q |
| |
|
||| |||||||||||||||||||||||||| |
|
|
| T |
31100786 |
ctccaattcccaaattgactccacacttat |
31100757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 53 - 224
Target Start/End: Complemental strand, 27541672 - 27541502
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
27541672 |
ttatatctaatctttgttaacattgctaatgactttgcaaaccctaaacctaaatggctttggctccaaa-caagggacgccgttggatctcatcatttg |
27541574 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcac |
224 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
27541573 |
gctaagcatgcatctcatcctttgatctaatctgaatcaaactttcaaatttgatgtatatttcctatgcac |
27541502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 37920074 - 37920118
Alignment:
| Q |
4 |
aagatttcttttatcatcactgaattatttaccgtacccttacat |
48 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37920074 |
aagattttttttatcatcactgaattatttaccgtacccttacat |
37920118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 5662652 - 5662706
Alignment:
| Q |
133 |
ccgttggatctcatcatttggctaagcatgcatctcatcctttgatctaatctga |
187 |
Q |
| |
|
||||| |||||||||||||||||| |||| |||||||||||||||| |||||||| |
|
|
| T |
5662652 |
ccgttagatctcatcatttggctaggcattcatctcatcctttgatttaatctga |
5662706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 23738664 - 23738731
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaa |
121 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||||||| ||| |||||| | |||||||||||| |
|
|
| T |
23738664 |
ttatatctaatctttgttaacattgctaatgactttgcaaaccctaaccctaaa-gtttttggctccaa |
23738731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 24788147 - 24788079
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaa |
121 |
Q |
| |
|
|||||||||||||| |||||||||| ||||| ||||||||| ||||||||| | |||||||| |||| |
|
|
| T |
24788147 |
ttatatctaatcttaattaacattgctaatgactttgcaaaccctaaacctaattagttttggcgccaa |
24788079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 194; Significance: 1e-105; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 53 - 282
Target Start/End: Complemental strand, 29863475 - 29863246
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29863475 |
ttatatctaatctttgttaacattgctcatgactttgcaaaccgtaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
29863376 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
252 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
29863375 |
gctgagcatgcatctcatcctttgatctaatctgagtcaaactttcaaatttgatgtatatttcttatgcacttatccaagttttgactcattaattatc |
29863276 |
T |
|
| Q |
253 |
ctcaaattcccaaattgactccacacttat |
282 |
Q |
| |
|
||| |||||||||||||||||||||||||| |
|
|
| T |
29863275 |
ctccaattcccaaattgactccacacttat |
29863246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 107
Target Start/End: Original strand, 12506443 - 12506497
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaat |
107 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||||| | ||||||||||| |
|
|
| T |
12506443 |
ttatatctaatctttgttaacattgctaatgactttgcaaatcctaaacctaaat |
12506497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0045 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0045
Description:
Target: scaffold0045; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 53 - 285
Target Start/End: Complemental strand, 11748 - 11516
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11748 |
ttatatctaatctttgttaacattgctaatgactttgcaaaccctaaacctaactggttttgactccaaaacaagggaggccgttggatctcatcatttg |
11649 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaatctgagtcaaattttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattaattatc |
252 |
Q |
| |
|
| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
11648 |
gttaagcatgcatctcatcctttgatttaatctgagtcaaactttcaaatttgatgtatatttcctatgcacttatccaagttttgactcattcattatc |
11549 |
T |
|
| Q |
253 |
ctcaaattcccaaattgactccacacttattga |
285 |
Q |
| |
|
||| ||||||||||||||||||||||||||||| |
|
|
| T |
11548 |
ctccaattcccaaattgactccacacttattga |
11516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0096 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0096
Description:
Target: scaffold0096; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 53 - 183
Target Start/End: Original strand, 27417 - 27546
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaaacaagggaggccgttggatctcatcatttg |
152 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
27417 |
ttatatctaatctttgttaacattgctaatgattttgcaaaccctaaacctaaatggttttggctccaaa-caagggaggccgttggatctcatcatttg |
27515 |
T |
|
| Q |
153 |
gctaagcatgcatctcatcctttgatctaat |
183 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
27516 |
gctaagcatgcatctcatcctttgatctaat |
27546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 50990914 - 50990983
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaaa |
122 |
Q |
| |
|
|||||||||||||||||||||||||| || | ||||||||| |||||||||||||||||||||||||| |
|
|
| T |
50990914 |
ttatatctaatctttgttaacattgctgataactttgcaaaccctaaacctaaatggttttggctccaaa |
50990983 |
T |
|
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Target: scaffold0157 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0157
Description:
Target: scaffold0157; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 107
Target Start/End: Complemental strand, 14034 - 13980
Alignment:
| Q |
53 |
ttatatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaat |
107 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||||| | ||||||||||| |
|
|
| T |
14034 |
ttatatctaatctttgttaacattgctaatgactttgcaaatcctaaacctaaat |
13980 |
T |
|
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Target: scaffold0475 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 121
Target Start/End: Complemental strand, 7585 - 7520
Alignment:
| Q |
55 |
atatctaatctttgttaacattgccaatgaaattgcaaaccttaaacctaaatggttttggctccaa |
121 |
Q |
| |
|
|||| ||||||||||||||||||| ||||| ||||||||| ||| |||||| | |||||||||||| |
|
|
| T |
7585 |
atatataatctttgttaacattgctaatgactttgcaaaccctaaccctaaa-gtttttggctccaa |
7520 |
T |
|
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