View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8521A_low_149 (Length: 281)
Name: NF8521A_low_149
Description: NF8521A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8521A_low_149 |
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Alignment Details
Target: chr3 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 2 - 276
Target Start/End: Complemental strand, 55174159 - 55173885
Alignment:
| Q |
2 |
gtggctagatattcttgataaggcaagacatggaggtttgaacgttattcaaacttacgtgttttggaacgctcatgagccagagcaaggcaaggtatat |
101 |
Q |
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| T |
55174159 |
gtggccagacattcttgataaggcaagacatggaggtttgaacgttattcaaacttacgtgttttggaacgctcatgagccagagcaaggcaaggtatat |
55174060 |
T |
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| Q |
102 |
gattaattaaatgacaaaattaatctcttgactcaatgtatggaacatttgattgtaaacttaatttgtttatcaaacgttatgcagttcaactttgaag |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
55174059 |
gattaattaaatgacaaaattaatctcttgactcaatgtatggaacatttgattgtaaacttaatttgtttatcaaacgttatgcagttcaattttgaag |
55173960 |
T |
|
| Q |
202 |
gcaacaatgatttggtgaagttcattaggcttgttcaatcaaaaggaatgtacgtgaccctcagggttggaccgt |
276 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
55173959 |
gcaacaatgatttggtgaagttcattaggcttgttcaatcaaaaggaatgtacgtgaccctcagggttggaccgt |
55173885 |
T |
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