View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8521A_low_164 (Length: 270)
Name: NF8521A_low_164
Description: NF8521A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8521A_low_164 |
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Alignment Details
Target: chr8 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 9 - 265
Target Start/End: Original strand, 2064711 - 2064967
Alignment:
| Q |
9 |
aacagagaggaagagaacggaggaggtcggagttacggaactttgataaacagacagcgcaatcagcggcggtgacggcggaggaacgacgggagatgga |
108 |
Q |
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| T |
2064711 |
aacagagaggaagagaacggaggaggtcggagttacggaactttgataaacagacagcgcagtcagcggcggtgacggcggaggaacgacgggagatgga |
2064810 |
T |
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| Q |
109 |
tgagaatgtgaagagagggagtgagtcgatgacggagggaggtgttgtttctggagagatacgacggctgtgagtgtgaggaggaggttcggtggttgtt |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2064811 |
tgagaatgtgaagagagggagtgagtcgatgacggagggaggtgttgtttctggagagatacgacggctgtgagtgtgaggaggaggttcggtggttgtt |
2064910 |
T |
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| Q |
209 |
ggagatggattacggcggagacggtgacagttgaggtggcggaggaggaagcagatt |
265 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2064911 |
ggagatggattacggcggagacggtgacagttgaggtggcggaggaggaagcagatt |
2064967 |
T |
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