View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8521A_low_187 (Length: 256)
Name: NF8521A_low_187
Description: NF8521A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8521A_low_187 |
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Alignment Details
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 38322845 - 38322605
Alignment:
| Q |
1 |
tatcacttcaatcgctgaaggatggactttagattctgaaattgaggcatttatttgagcatcactttcgacaagtcgatatcctttgttttctttcagc |
100 |
Q |
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| T |
38322845 |
tatcacttcaatctctgaaggatggactttagattctgaaattgaggcatttatttgagcattactttcgacaagtcgatatcctttgttttctttcagc |
38322746 |
T |
|
| Q |
101 |
tgcacaaatacattcaacattatttgctactattaattaataagatcataagttcataaatatgattacattgaccatttagtatagaaaaatgaacctg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
38322745 |
tgcacaaatacattcaacattatttgctactattaattaataagatcataagttcataaatatgattacattgaccatatagtatagaaaaatgaacctg |
38322646 |
T |
|
| Q |
201 |
cactttttgccaatcagggttgtactttatggctaacacat |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
38322645 |
cactttttgccaatcagggttgtactttatggctaacacat |
38322605 |
T |
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