View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8521A_low_211 (Length: 250)
Name: NF8521A_low_211
Description: NF8521A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8521A_low_211 |
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Alignment Details
Target: chr7 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 2 - 246
Target Start/End: Complemental strand, 39792461 - 39792217
Alignment:
| Q |
2 |
caaagagagaacttaccacaatggaattttcttgaaggaattcaccagacatagtgttcactcaaactcagtcaaacctaaagaatgtaattgtaagaaa |
101 |
Q |
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| T |
39792461 |
caaagagagaacttaccacaatgaaattttcttgaagggattcaccagacatagtgttcactcaaactcagtcaaacctaaagaatgtaattgtaagaaa |
39792362 |
T |
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| Q |
102 |
attcttagtagcttaaagttatttttaaattacaaatataccctgttgtattgtacataagcaccatttttattgaattatttatgcttatcacacatta |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39792361 |
attcttagtagcttaaagttatttttaaattacaaatataccctgttgtattgtacataagcaccatttttattgaattatttatgcttatcacacatta |
39792262 |
T |
|
| Q |
202 |
tgcaggcaattagaaatgttgtttgtcttattatagtgaaaactg |
246 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
39792261 |
tgcaggcaattagaaatgttgtttgtcttattatagtgcaaactg |
39792217 |
T |
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