View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8521A_low_296 (Length: 230)
Name: NF8521A_low_296
Description: NF8521A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8521A_low_296 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 6 - 230
Target Start/End: Complemental strand, 44232090 - 44231866
Alignment:
| Q |
6 |
actaagttcattaataaatacaaccaacaaaactattgcaatactttcctggttttggccatacacaagagtcacatcacatgcacaagtccaaaatcca |
105 |
Q |
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| T |
44232090 |
actaagttcattaataaatacaaccaacaaaactattgccatactttcctggttttggccatacaaaagaggcacatcacatgcacaagtccaaaattca |
44231991 |
T |
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| Q |
106 |
catgcacaagtccaaaatatgcaatctttgataatgtacttacatcaattcacataaaaaagatagtgctaggatggaaacttttggcagtagtgaactt |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44231990 |
catgcacaagtccaaaatatgcaatctttgataatgtacttacatcaattcacataaaaaagatagtgctaggatggaaacttttggcagtagtgaactt |
44231891 |
T |
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| Q |
206 |
agatttgtattgattgtgtaccaga |
230 |
Q |
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||||||||||||||||||||||||| |
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| T |
44231890 |
agatttgtattgattgtgtaccaga |
44231866 |
T |
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