View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8521A_low_362 (Length: 208)
Name: NF8521A_low_362
Description: NF8521A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8521A_low_362 |
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Alignment Details
Target: chr3 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 20 - 193
Target Start/End: Original strand, 32861148 - 32861321
Alignment:
| Q |
20 |
gtatctccactttatttatattttactcggacttgatccgacccgatagttccggaatggacccctatcctaacccgttaattaaatgatacccaaactc |
119 |
Q |
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| T |
32861148 |
gtatctccactttatttatattttactcggacttgatccgacccgatagttccggaatggacccctatcctaacccgttaattaaatgatacccaaactc |
32861247 |
T |
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| Q |
120 |
atattctgcttaacctcgggtcatccgccccaacatataaattttcagtgttccctttctctgcgtttttcttc |
193 |
Q |
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| T |
32861248 |
atattctgcttaacctcgggtcatccgccccaacatataaattttcagtgttccctttctctgcgattttcttc |
32861321 |
T |
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